BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047017
         (534 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/551 (68%), Positives = 456/551 (82%), Gaps = 24/551 (4%)

Query: 1   QSTVVSCINPKSNE--RVR----VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFD 54
            ST+VSCI P+ N+  +VR    V  SAETR  TH+LSFD KE   MKL+ RS RAGK++
Sbjct: 28  HSTIVSCIRPELNDANKVRNPQKVRVSAETR-QTHVLSFDFKEVHLMKLLNRSCRAGKYN 86

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS 114
           ESLYF+E MV  G  PDV++CTKLIK FF  R   KA RVMEILE+YG+PDVFAYNALIS
Sbjct: 87  ESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALIS 146

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GF KANQ+E AN+VLDR++SRGF PDVVTYNIMIGS CSRG ++ A ++F++LL+DNC+P
Sbjct: 147 GFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEP 206

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
           TVITYTILI+AT+L+G  D AMKLLDEM                 GMCK+ MV +AF+ +
Sbjct: 207 TVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELL 266

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           RSL SRGC+PD+I+YN+LLRTLL+ GKW EGEKL++EMIS G +PNVVT+SILI +LCRD
Sbjct: 267 RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRD 326

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK E+AV++LR+ KEKGL PDAY YDPLI+ +C++GRLDLA EFL+YMISDGCLPDIVNY
Sbjct: 327 GKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNY 386

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NTI+A  C+ G ADQALE+FEKL +VGCPPNVSSYNT+FSALWSSGD+ RAL MI ++L+
Sbjct: 387 NTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLN 446

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +GI+PDEITYNSLISCLCRDGMVDEA+ LLVDM+S R+RP V+SYNII+LG CK  R N+
Sbjct: 447 QGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAND 506

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           +IEVLAAM EKGC+PNETTY+LLIEGIG+ G RAEAMELAN+L  M+AIS D+F RLN+T
Sbjct: 507 AIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKT 566

Query: 518 FPLLDVYKEIS 528
           FPLLDVYK+++
Sbjct: 567 FPLLDVYKDLT 577


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/556 (65%), Positives = 438/556 (78%), Gaps = 24/556 (4%)

Query: 1   QSTVVSCINPKSNE------RVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFD 54
            +++V+C NP  N+        +V  SAE RP  HL S+D +ET  MKL+ RS +AGKF+
Sbjct: 37  HTSIVTCRNPNPNDGYNSRNSPKVGVSAEARP-AHLQSYDFRETHLMKLLNRSCKAGKFN 95

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS 114
           ESLYF+E +V  G  PDV++CTKLIK FF  +   KA RVMEILE + EPDVFAYNA+IS
Sbjct: 96  ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVIS 155

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GFCK NQIE A +VL+R+++RGF PD+VTYNIMIGSLC+R  +  A  V DQLL DNC P
Sbjct: 156 GFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMP 215

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
           TVITYTILI+AT++EG  ++AMKLL+EM                 GMCK+GMV +A + +
Sbjct: 216 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 275

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            SL S+GC+PDVISYN+LLR  LN GKW+EGEKL+ EM SRG EPN VTYSILISSLCR 
Sbjct: 276 TSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 335

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A+ VL+   EK LTPD YSYDPLISA CK+GRLDLAI  +DYMIS+GCLPDIVNY
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NTILAA CKNGNA+QALEIF KL  +GCPPNVSSYNTM SALWS GD+ RALGM+  M+S
Sbjct: 396 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 455

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KGI+PDEITYNSLISCLCRDG+V+EA+GLL DME + FRPTVISYNI++LG CK RRI++
Sbjct: 456 KGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 515

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           +I + A M EKGC+PNETTY+LLIEGIG+ GWR EAMELAN+L S   IS+D+FKRLN+T
Sbjct: 516 AIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKT 575

Query: 518 FPLLDVYKEISHLATK 533
           FP+LDVYKE+S+  TK
Sbjct: 576 FPMLDVYKELSNSETK 591


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/556 (65%), Positives = 439/556 (78%), Gaps = 24/556 (4%)

Query: 1   QSTVVSCINPKSNERV------RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFD 54
            +++V+C NP  N+        +V  SAE RP  HL S+D +ET  MKL+ RS +AGKF+
Sbjct: 27  HTSIVTCRNPNPNDGFNSRNAPKVGVSAEARP-AHLQSYDFRETHLMKLLNRSCKAGKFN 85

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS 114
           ESLYF+E +V  G  PDV++CTKLIK FF  +   KA RVMEILE + EPDVFAYNA+IS
Sbjct: 86  ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVIS 145

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GFCK N+IE A +VL+R+++RGF PD+VTYNIMIGSLC+R  +  A KV DQLL DNC P
Sbjct: 146 GFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMP 205

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
           TVITYTILI+AT++EG  ++AMKLL+EM                 GMCK+GMV +A + +
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 265

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            SL S+GC+PDVISYN+LLR  LN GKW+EGEKL+ EM SRG EPN VTYSILISSLCR 
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A+ VL+   EK LTPD YSYDPLISA CK+GRLDLAI  +DYMIS+GCLPDIVNY
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NTILAA CKNGNA+QALEIF KL  +GCPPNVSSYNTM SALWS GD+ RALGM+  M+S
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 445

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG++PDEITYNSLISCLCRDG+V+EA+GLL DME + FRPTVISYNI++LG CK RRI++
Sbjct: 446 KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           +I + A M EKGC+PNETTY+LLIEGIG+ GWR EAMELAN+L S   IS+D+FKRLN+T
Sbjct: 506 AIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKT 565

Query: 518 FPLLDVYKEISHLATK 533
           FP+LDVYKE+S+  TK
Sbjct: 566 FPMLDVYKELSNSETK 581


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/534 (65%), Positives = 432/534 (80%), Gaps = 18/534 (3%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           V+SSAE R   H  + D ++   MKL+ RS RAGK +ESLYF+ES+V+ G KPDVV+CTK
Sbjct: 44  VTSSAEFR-QPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTK 102

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           LIK FF  R   KA+RVMEILE YG+PDV++YNA+ISGF KANQI+ AN+V DR+RSRGF
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGF 162

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           SPDVVTYNIMIGSLCSRG +E AF+V D+LL+D CKP+VITYTILI+AT+LEG+ ++A++
Sbjct: 163 SPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALE 222

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L DE+                 G+CK+GM  +A  FVR L +RGC PDV+SYN+LLR+ L
Sbjct: 223 LFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFL 282

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
           N  +WE+GE+LM +M+  G EPNVVT+SILISS CR+G+  +AV+VL   KEKGLTPD+Y
Sbjct: 283 NKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSY 342

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           SYDPLISA+CK+GRLDLAIE+L+ M+SDGCLPDIVNYNTILA  CK G AD AL++FEKL
Sbjct: 343 SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL 402

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            +VGCPP V +YNTMFSALWS G+KI+AL MISEM+ KGI+PDEITYNSLISCLCRDG+V
Sbjct: 403 DEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLV 462

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEA+GLLVDME+TRF+PTVIS+NI++LG CK  R+ E IE+L  M EKGC PNET+YVLL
Sbjct: 463 DEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLL 522

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATKD 534
           IEGI Y GWRAEAMELAN+L  +  IS D+ KRLN+TFP+LDVYK +S   +K+
Sbjct: 523 IEGIAYAGWRAEAMELANSLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSESKN 576


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/522 (66%), Positives = 422/522 (80%), Gaps = 17/522 (3%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   H  S   ++TQ +K+  RS R+G + ESL+ +E+MV  G  PDV++CTKLIK FF 
Sbjct: 73  RRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 132

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            R   KAVRVMEILEK+G+PDVFAYNALI+GFCK N+I+ A +VLDR+RS+ FSPD VTY
Sbjct: 133 LRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 192

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NIMIGSLCSRG ++ A KV DQLL DNC+PTVITYTILI+ATMLEG  D+A+KLLDEM  
Sbjct: 193 NIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLS 252

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          GMCK+GMV +AF+ +R+LE +GC+PDVISYN+LLR LLN GKWEE
Sbjct: 253 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEE 312

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           GEKLMT+M S   +PNVVTYSILI++LCRDGK E+A+++L+  KEKGLTPDAYSYDPLI+
Sbjct: 313 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+C++GRLD+AIEFL+ MISDGCLPDIVNYNT+LA  CKNG ADQALEIF KL +VGC P
Sbjct: 373 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N SSYNTMFSALWSSGDKIRAL MI EM+S GI+PDEITYNS+ISCLCR+GMVD+A  LL
Sbjct: 433 NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           VDM S  F P+V++YNI++LGFCK  RI ++I+VL +M   GC+PNETTY +LIEGIG+ 
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552

Query: 488 GWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
           G+RAEAMELAN LV ++AIS  +FKRL+RTFPLL+V +  S 
Sbjct: 553 GYRAEAMELANDLVRINAISEYSFKRLHRTFPLLNVLQRSSQ 594


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/522 (66%), Positives = 420/522 (80%), Gaps = 17/522 (3%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   H  S   ++TQ +K+  RS R+G + ESL+ +E+MV  G  PDV++CTKLIK FF 
Sbjct: 77  RRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            R   KAVRVMEILEK+G+PDVFAYNALI+GFCK N+I+ A +VLDR+RS+ FSPD VTY
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NIMIGSLCSRG ++ A KV +QLL DNC+PTVITYTILI+ATMLEG  D+A+KL+DEM  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          GMCK+GMV +AF+ VR+LE +GC+PDVISYN+LLR LLN GKWEE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           GEKLMT+M S   +PNVVTYSILI++LCRDGK E+A+++L+  KEKGLTPDAYSYDPLI+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+C++GRLD+AIEFL+ MISDGCLPDIVNYNT+LA  CKNG ADQALEIF KL +VGC P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N SSYNTMFSALWSSGDKIRAL MI EM+S GI+PDEITYNS+ISCLCR+GMVDEA  LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           VDM S  F P+V++YNI++LGFCK  RI ++I VL +M   GC+PNETTY +LIEGIG+ 
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556

Query: 488 GWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
           G+RAEAMELAN LV + AIS  +FKRL+RTFPLL+V +  S 
Sbjct: 557 GYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQRSSQ 598


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/522 (66%), Positives = 419/522 (80%), Gaps = 17/522 (3%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   H  S   ++TQ +K+  RS R+G + ESL+ +E+MV  G  PDV++CTKLIK FF 
Sbjct: 77  RRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            R   KAVRVMEILEK+G+PDVFAYNALI+GFCK N+I+ A +VLDR+RS+ FSPD VTY
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NIMIGSLCSRG ++ A KV +QLL DNC+PTVITYTILI+ATMLEG  D+A+KL+DEM  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          GMCK+GMV +AF+ VR+LE +G +PDVISYN+LLR LLN GKWEE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           GEKLMT+M S   +PNVVTYSILI++LCRDGK E+A+++L+  KEKGLTPDAYSYDPLI+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+C++GRLD+AIEFL+ MISDGCLPDIVNYNT+LA  CKNG ADQALEIF KL +VGC P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N SSYNTMFSALWSSGDKIRAL MI EM+S GI+PDEITYNS+ISCLCR+GMVDEA  LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           VDM S  F P+V++YNI++LGFCK  RI ++I VL +M   GC+PNETTY +LIEGIG+ 
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556

Query: 488 GWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
           G+RAEAMELAN LV + AIS  +FKRL+RTFPLL+V +  S 
Sbjct: 557 GYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQRSSQ 598


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/524 (62%), Positives = 417/524 (79%), Gaps = 18/524 (3%)

Query: 23  ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
           ET+P  H   +D ++T FMK + RS ++ K+DESLYF++ MV  G KPDV++CTKLIK F
Sbjct: 63  ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGF 122

Query: 83  FQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           F  +K  KA++VMEILEK+G+PDVFAYNA+ISGFCKA++++ A+KVLDR++ RGF PDVV
Sbjct: 123 FNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVV 182

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYNI+IG+ C RG ++ A +V DQLL+DNCKPTVITYTILI+AT+ +G  D+AMKLLDEM
Sbjct: 183 TYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM 242

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            GMCK+GM+ +AF+F+  +   GC   V +YN+LLR LLN GKW
Sbjct: 243 LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E GEKLM++M+ +G EPN +TYS LI++LCRDGK ++A +VL+  KEK L PD YSYDPL
Sbjct: 303 EYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPL 362

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           ISA C++G++DLAIEFLD MIS G LPDI++YN+ILA+ CKNGNAD+AL IFEKL +VGC
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           PPN  SYNT+F ALWSSGDKIRALGMI EMLS GI+PDEITYNSLISCLCRDG+VD+A+ 
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 426 LLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           LLVDM ES + +PTVISYN ++LG CK +RI ++IEVLAAM  +GC PNETTY LLI+GI
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542

Query: 485 GYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEIS 528
           G+ GWR +AMELAN LV+M AIS D+FKR  + FP+ D +KE++
Sbjct: 543 GFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFPVFDAHKELA 586


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/481 (69%), Positives = 400/481 (83%), Gaps = 18/481 (3%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           MVA   +PDV++CTKLIK FF  R  +KA RVM ILEK+G+PDVFAYNA+ISGFCKAN+I
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTI 181
           E A  VLDR++ +GFSPDVVT+NIMIG+ C +G I+ A KVF++LL+DN CKPT+ITYTI
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI+A +LEG  D+A+KLLDEM                 G+CK+G V +AF+FVR+L SRG
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+PDVI+YN+LLR LLN GKW+EGEK M+E+ SRG EPNVVTYSILISSLCRDGK E++V
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++++  KEKGLTPDAY YDPLI+A+C++G+LD+AIEFLD MI DG LPDIVNYNTI+AA 
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CKNGN D A+EIF KL +VGCPPNVSSYNTM SALWSSGD+ RALGMIS+MLSKGI+PD 
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           ITYNSLISCLCRDGMVDEA+GLL DM S RF+P ++SY  ++LG CK  RI+++IEVLAA
Sbjct: 361 ITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAA 420

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVY 524
           M E GC+PNETTY LLIEGIG+ G R +AMELAN+L  M+AIS D+FKRLN+TFPLLDVY
Sbjct: 421 MIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFKRLNKTFPLLDVY 480

Query: 525 K 525
           K
Sbjct: 481 K 481



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 198/364 (54%), Gaps = 19/364 (5%)

Query: 51  GKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           GK D +L   E ++  N CKP ++  T LI+ +  E   ++A++++ E+L +  EPD F 
Sbjct: 93  GKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFT 152

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +  G CK  +++ A + +  L SRG  PDV+TYNI++ +L ++G  +   K   ++ 
Sbjct: 153 YNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKA---MKLLDEMGM--------------CKKGMVG 211
              C+P V+TY+ILI +   +G+ +++   +K++ E G+              C++G + 
Sbjct: 213 SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A +F+  +   G  PD+++YN ++  L   G  +   ++  ++   G  PNV +Y+ ++
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTML 332

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S+L   G    A+ ++     KG+ PD  +Y+ LIS  C+DG +D AI  L  M+S    
Sbjct: 333 SALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ 392

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+IV+Y T+L   CK    D A+E+   + + GC PN ++Y  +   +  SG + +A+ +
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452

Query: 392 ISEM 395
            + +
Sbjct: 453 ANSL 456



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 18/336 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G  DE+L  ++ M++ G +PD      + +   +E K ++A   +  L   G
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  YN L+       + +   K +  + SRG  P+VVTY+I+I SLC  G IE + 
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +   +      P    Y  LI A   EG+ D A++ LD M                  +
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G    A +    L+  GC P+V SYN +L  L + G       ++++M+S+G++P+V
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+ LIS LCRDG  ++A+ +L         P+  SY  ++   CK  R+D AIE L  
Sbjct: 361 ITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAA 420

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           MI +GC P+   Y  ++     +G+  QA+E+   L
Sbjct: 421 MIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/540 (60%), Positives = 420/540 (77%), Gaps = 23/540 (4%)

Query: 10  PKSNERVRVSS--SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG 67
           P  NE   ++   S+ ++P TH L F  K+T  +K + RS +AG F+ESLYF+  +V  G
Sbjct: 30  PILNETTNINRTLSSVSKPQTHTLDF--KDTHLLKSLSRSCKAGNFNESLYFLRHLVNKG 87

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK 127
            KPDVV+CTKLI   F  +  +KA++VM ILE +G PD+ AYNA+I+GFC+AN+I+ A +
Sbjct: 88  HKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQ 147

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VLDR++++GFSPD+VTYNI+IGSLCSRGM++SA +  +QLL++NCKPTV+TYTILI+AT+
Sbjct: 148 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATL 207

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
           L+G  D+AMKLLDEM                 GMC++G V +AFQ + S+ S+G  PDVI
Sbjct: 208 LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN+LLR LLN GKWE G +LM++M++RG E NVVTYS+LISS+CRDGK E+ V +L+  
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K+KGL PD Y YDPLI+A CK+GR+DLAIE LD MISDGC+PDIVNYNTILA  CK   A
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+AL IFEKL +VGC PN SSYN+MFSALWS+G K+RALGMI EML KG++PD ITYNSL
Sbjct: 388 DEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSL 447

Query: 411 ISCLCRDGMVDEAVGLLVD--MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ISCLCRDGMVDEA+ LLVD  MES+  +P+V+SYNI++LG CK  R++++IEVLAAM +K
Sbjct: 448 ISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDK 507

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEIS 528
           GC+PNETTY  LIEGIG+GG   +A +LA  LV+M AIS  +F+RL +TF  LDVY++++
Sbjct: 508 GCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFCKLDVYRQLN 567


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/548 (60%), Positives = 416/548 (75%), Gaps = 39/548 (7%)

Query: 2   STVVSCINPKSNE----------------RVRVSSSAETRPNTHLLSFDVKETQFMKLIK 45
           +TV++C  P  NE                  RV+SS +TRP      +D ++T  MK + 
Sbjct: 29  NTVITCRIPLLNEDNPSKRRLNNNNNNKGHTRVTSS-DTRPQQQ--HYDFRDTHHMKALN 85

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPD 105
           R  + GK+ E+LYF+E MV  G KPDV++CTKLIK  F  +++ KAVRVMEILE+YG+PD
Sbjct: 86  RLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPD 145

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            FAYNA+ISGFC++++ + AN+V+ R++ RGFSPDVVTYNI+IGSLC+RG ++ A KV D
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           QLL DNC PTVITYTILI+AT++ G  D AM+LLDEM                 GMCK+G
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           +V +AF+FV +L +    P +  YN+LL+ LLN G+WE GE+LM++MI +G EPN+VTYS
Sbjct: 266 LVDRAFEFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LISSLCRDGK  +AVDVLR  KEKGL PDAY YDPLISA+CK+G++DLAI F+D MIS 
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA 382

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G LPDIVNYNTI+ + CK G AD+AL IF+KL +VGCPPN SSYNTMF ALWSSGDKIRA
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRA 442

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L MI EMLS G++PD ITYNSLIS LCRDGMVDEA+GLLVDME T ++PTVISYNI++LG
Sbjct: 443 LTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            CK  RI ++IEVLA M + GC+PNETTY LL+EG+GY GWR+ A+ELA +LVSM+AIS+
Sbjct: 503 LCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQ 562

Query: 509 DTFKRLNR 516
           D F+RL +
Sbjct: 563 DLFRRLQK 570


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/426 (60%), Positives = 330/426 (77%), Gaps = 19/426 (4%)

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
            I  A +VLDR++++GFSPD+VTYNI+IGSLCSRGM+ +A +  +QLL++N  PTV+TYT
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163

Query: 181 ILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESRG 224
           ILI+AT+L+G  D+A+KLLDEM                 MC++G V +AF+ + S+ S+G
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKG 223

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
              DVI+YN+LLR+L N GKWE G +LM++M+++G E NVVTYS+LISSLCRDGK E+ V
Sbjct: 224 YALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGV 283

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L+  K+KGL PD Y YDPLI+  CK+GR+DLAIE LD MISDGC+PDIVNYNTILA  
Sbjct: 284 GLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACL 343

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK   AD+AL IFEKL +VGC PN SSYNT+FSAL SSG K+RALGMI EML   ++PD 
Sbjct: 344 CKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDV 402

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVD--MESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           I YNSLISCLCRDGMVDEA+ LLVD  MES+  +P+V+SYNI++LG C+  R++++ EVL
Sbjct: 403 IAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVL 462

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLD 522
           AAM +KGC PNETTY  LIEGIG+GGW  +A +LA  LV+M AIS  +F+RL +TF  LD
Sbjct: 463 AAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISEHSFERLYKTFCKLD 522

Query: 523 VYKEIS 528
           VY++++
Sbjct: 523 VYRQLN 528



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 219/421 (52%), Gaps = 41/421 (9%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G    +L F   ++     P VV  T LI+    +   ++A++++ E+ E   +PDVF Y
Sbjct: 138 GMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPY 197

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N++I   C+   ++ A +V+  + S+G++ DV+TYNI++ SL ++G  E+ F++   ++ 
Sbjct: 198 NSIIX-MCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVA 256

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C+  V+TY++LI +                  +C+ G V +    ++ ++ +G +PD 
Sbjct: 257 KGCEANVVTYSVLISS------------------LCRDGKVEEGVGLLKDMKKKGLEPDG 298

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
             Y+ L+  L   G+ +   +++  MIS G  P++V Y+ +++ LC+  + ++A+ +   
Sbjct: 299 YCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEK 358

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGR----LDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
             E G +P+A SY+ + SA    G     L + +E LD +      PD++ YN++++  C
Sbjct: 359 LGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVD-----PDVIAYNSLISCLC 413

Query: 346 KNGNADQALEIF--EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           ++G  D+A+E+    ++    C P+V SYN +   L   G    A  +++ M+ KG  P+
Sbjct: 414 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPN 473

Query: 404 EITYNSLISCLCRDGMVDEAVGL---LVDMESTRFRPTVISYNIIILGFCKT---RRINE 457
           E TY  LI  +   G +++A  L   LV+M++        S+  +   FCK    R++N 
Sbjct: 474 ETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISEH----SFERLYKTFCKLDVYRQLNL 529

Query: 458 S 458
           S
Sbjct: 530 S 530



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 145/288 (50%), Gaps = 20/288 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++     GK++     +  MVA GC+ +VV  + LI    ++ K  + V +++ ++K G
Sbjct: 234 LLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKG 293

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPD + Y+ LI+  CK  +++LA +VLD + S G  PD+V YN ++  LC +   + A 
Sbjct: 294 LEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 353

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
            +F++L    C P   +Y  +  A    G   +A+ ++ EM                 +C
Sbjct: 354 SIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDPDVIAYNSLISCLC 413

Query: 206 KKGMVGQAFQFV--RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + GMV +A + +    +ES  C+P V+SYN++L  L  +G+  +  +++  M+ +G  PN
Sbjct: 414 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPN 473

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             TY+ LI  +   G   DA D+           + +S++ L   +CK
Sbjct: 474 ETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISE-HSFERLYKTFCK 520


>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/374 (60%), Positives = 276/374 (73%), Gaps = 25/374 (6%)

Query: 1   QSTVVSCINPKSNERV------RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFD 54
            +++V+C NP  N+        +V  SAE RP  HL S+D +ET  MKL+ RS +AGKF+
Sbjct: 27  HTSIVTCRNPNPNDGFNSRNAPKVGVSAEARP-AHLQSYDFRETHLMKLLNRSCKAGKFN 85

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS 114
           ESLYF+E +V  G  PDV++CTKLIK FF  +   KA RVMEILE + EPDVFAYNA+IS
Sbjct: 86  ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVIS 145

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GFCK N+IE A +VL+R+++RGF PD+VTYNIMIGSLC+R  +  A KV DQLL DNC P
Sbjct: 146 GFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMP 205

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           TVITYTILI+AT++EG  ++AMKLL+EM                   +RG  PD+ +YN 
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEM------------------LARGLLPDMYTYNA 247

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++R +   G W+EGEKL+ EM SRG EPN VTYSILISSLCR G+ ++A+ VL+   EK 
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           LTPD YSYDPLISA CK+GRLDLAI  +DYMIS+GCLPDIVNYNTILAA CKNGNA+QAL
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 367

Query: 355 EIFEKLSDVGCPPN 368
           EIF KL  +GCPPN
Sbjct: 368 EIFNKLRGMGCPPN 381



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 13/324 (4%)

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           MKLL+    CK G   ++  F+  L ++G  PDVI    L++   N    E+  ++M E+
Sbjct: 72  MKLLNRS--CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EI 128

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +    EP+V  Y+ +IS  C+  + E A  VL   K +G  PD  +Y+ +I + C   +L
Sbjct: 129 LESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKL 188

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
            LA++ LD ++ D C+P ++ Y  ++ A    G  ++A+++ E++   G  P++ +YN +
Sbjct: 189 GLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 248

Query: 376 F-----SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
                   +W  G+K     +++EM S+G EP+++TY+ LIS LCR G +DEA+ +L  M
Sbjct: 249 IRGMCKEGMWDEGEK-----LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 303

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P   SY+ +I   CK  R++ +I ++  M   GC P+   Y  ++  +   G  
Sbjct: 304 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 363

Query: 491 AEAMELANALVSMHAISRDTFKRL 514
            +A+E+ N L  M     D  ++L
Sbjct: 364 NQALEIFNKLRGMGCPPNDGERKL 387



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 19/323 (5%)

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G    +    + L+     P VI  T LI+        +KA ++++           
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME----------- 127

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   LES   +PDV +YN ++     + + E   +++  M +RG  P++VTY+I+I
Sbjct: 128 -------ILESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMI 179

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            SLC   K   A+ VL         P   +Y  LI A   +G ++ A++ L+ M++ G L
Sbjct: 180 GSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLL 239

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+  YN I+   CK G  D+  ++  ++   GC PN  +Y+ + S+L   G    A+ +
Sbjct: 240 PDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 299

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +  M+ K + PD  +Y+ LIS LC++G +D A+G++  M S    P +++YN I+   CK
Sbjct: 300 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 359

Query: 452 TRRINESIEVLAAMFEKGCKPNE 474
               N+++E+   +   GC PN+
Sbjct: 360 NGNANQALEIFNKLRGMGCPPND 382


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/489 (44%), Positives = 319/489 (65%), Gaps = 21/489 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R  R G+ ++   F+ESMV  G  PD++ CT LI+ F +  K+ KA  VMEILE+ G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 104 -PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  YN LISG+CK+ +I+ A +VLDR+     +PDVVTYN ++ +LC  G ++ A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V D+ L+  C P VITYTILI+AT  E    +AMKLLDEM                 G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +A +F+ ++ S GCQP+VI++N++LR++ + G+W + EKL+++M+ +G  P+VV
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ILI+ LCR G    A+D+L      G TP++ SY+PL+  +CK+ ++D AIE+LD M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S GC PDIV YNT+L A CK+G  D A+EI  +LS  GC P + +YNT+   L   G  
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            RA+ ++ EM  KG++PD ITY+SL+S L R+G VDEA+    D+E    RP  I+YN I
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           +LG CK+R+ + +I+ LA M  K CKP E TY +LIEGI Y G   EA++L N L S   
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597

Query: 506 ISRDTFKRL 514
           + + + +++
Sbjct: 598 VKKSSAEQV 606


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/489 (44%), Positives = 319/489 (65%), Gaps = 21/489 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R  R G+ ++   F+ESMV  G  PD++ CT LI+ F +  K+ KA  VMEILE+ G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 104 -PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  YN LISG+CK+ +I+ A +VLDR+     +PDVVTYN ++ +LC  G ++ A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V D+ L+  C P VITYTILI+AT  E    +AMKLLDEM                 G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +A +F+ ++ S GCQP+VI++N++LR++ + G+W + EKL+++M+ +G  P+VV
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ILI+ LCR G    A+D+L      G TP++ SY+PL+  +CK+ ++D AIE+LD M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S GC PDIV YNT+L A CK+G  D A+EI  +LS  GC P + +YNT+   L   G  
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            RA+ ++ EM  KG++PD ITY+SL+S L R+G VDEA+    D+E    RP  I+YN I
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           +LG CK+R+ + +I+ LA M  K CKP E TY +LIEGI Y G   EA++L N L S   
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540

Query: 506 ISRDTFKRL 514
           + + + +++
Sbjct: 541 VKKSSAEQV 549


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/487 (42%), Positives = 317/487 (65%), Gaps = 21/487 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           SF +++ +    +++  R G+ +E   F+E+MV +G  PD++ CT LI+ F +  K+ KA
Sbjct: 97  SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 156

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            +++EILE  G  PDV  YN +ISG+CKA +I  A  VLDR+     SPDVVTYN ++ S
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRS 213

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G ++ A +V D++L+ +C P VITYTILI+AT  +     AMKLLDEM        
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G + +A +F+  + S GCQP+VI++N++LR++ + G+W + EKL+ 
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M+ +G  P+VVT++ILI+ LCR G    A+D+L    + G  P++ SY+PL+  +CK+ 
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           ++D AIE+L+ M+S GC PDIV YNT+L A CK+G  + A+EI  +LS  GC P + +YN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+   L  +G   +A+ ++ EM +K ++PD ITY+SL+  L R+G VDEA+    + E  
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             RP  +++N I+LG CK+R+ + +I+ L  M  +GCKPNET+Y +LIEG+ Y G   EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573

Query: 494 MELANAL 500
           +EL N L
Sbjct: 574 LELLNEL 580


>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
          Length = 327

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/303 (67%), Positives = 253/303 (83%), Gaps = 17/303 (5%)

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
           +++TYTILI+AT+L+G  D  MKLLDEM                 GMC++G+V +AF+F+
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R + ++G  PDVISY++LLR LLN  KWE+GEKLM++M+S+G EPNVVTYSILISSLCRD
Sbjct: 84  RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK E+AV +L+  KE+GLTPDAYSYDPLI+A+CK+ R+DLAIEFL+ MISDGCLPDIVNY
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NTIL+  CKNG AD+AL+IFEKL +VGCPPNVSSYNT+FSALWSSG KIRALGMI EMLS
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLS 263

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           K I+PDEITYNSLISCLCRD MVD+A+ LLVDMES+ ++P+VISYNI++LG  K  RI++
Sbjct: 264 KDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISD 323

Query: 458 SIE 460
           +IE
Sbjct: 324 AIE 326



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 174/353 (49%), Gaps = 45/353 (12%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI 79
           ++  T+   H L F +++T  + L+  +            IE+ +  G   DV+   KL+
Sbjct: 2   TTVSTKFLPHTLPFTLQQTNPISLVTYTI----------LIEATILKGGVDDVM---KLL 48

Query: 80  KKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
                           E++E    PD+F +NA++ G C+   ++ A + +  + ++G++P
Sbjct: 49  D---------------EMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAP 93

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DV++Y+I++  L ++   E   K+   +L   C+P V+TY+ILI +   +G+ ++A+ LL
Sbjct: 94  DVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLL 153

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M                   CK+  V  A +F+ S+ S GC PD+++YN +L TL   
Sbjct: 154 KVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKN 213

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           GK +E  K+  ++   G  PNV +Y+ L S+L   G    A+ ++     K + PD  +Y
Sbjct: 214 GKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITY 273

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           + LIS  C+D  +D AIE L  M S    P +++YN +L    K      A+E
Sbjct: 274 NSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDAIE 326



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 128/240 (53%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++VTY+ILI +    G  +D + +L    E GL PD + ++ ++   C++G +D A EF+
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            Y+ + G  PD+++Y+ +L         +   ++   +   GC PNV +Y+ + S+L   
Sbjct: 84  RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+ ++  M  +G+ PD  +Y+ LI+  C++  VD A+  L  M S    P +++Y
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N I+   CK  + +E++++   + E GC PN ++Y  L   +   G +  A+ +   ++S
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLS 263



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 72/135 (53%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           P ++ +Y  +  A    G     + ++ EM+  G+ PD   +N+++  +CR+G+VD A  
Sbjct: 22  PISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFE 81

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            +  + +  + P VISY+I++ G    R+  +  ++++ M  KGC+PN  TY +LI  + 
Sbjct: 82  FIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLC 141

Query: 486 YGGWRAEAMELANAL 500
             G   EA+ L   +
Sbjct: 142 RDGKVEEAVSLLKVM 156


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/501 (41%), Positives = 324/501 (64%), Gaps = 21/501 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           SF +++ +    +++  R G+ +E   F+E+MV +G  PD++ CT LI+ F +  K+ KA
Sbjct: 97  SFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKA 156

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            +++E+LE  G  PDV  YN +ISG+CKA +I  A  VLDR+     SPDVVTYN ++ S
Sbjct: 157 AKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRS 213

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G ++ A +V D++L+ +C P VITYTILI+AT  +    +AMKLLDEM        
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPD 273

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G + +A +F+  + S GCQP+VI++N++LR++ + G+W + EKL+ 
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M+ +G  P+VVT++ILI+ LCR G    A+D+L    + G  P++ SY+PL+  +CK+ 
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           ++D AIE+L+ M+S GC PDIV YNT+L A CK+G  + A+EI  +LS  GC P + +YN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+   L  +G   +A+ ++ EM +K ++PD ITY+SL+  L R+G VDEA+    + E  
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             RP  +++N I+LG CKTR+ + +I+ L  M  +GCKP ET+Y +LIEG+ Y G   EA
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573

Query: 494 MELANALVSMHAISRDTFKRL 514
           +EL N L +   + R + +++
Sbjct: 574 LELLNELCNKGLMKRSSAEQV 594


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/495 (43%), Positives = 312/495 (63%), Gaps = 21/495 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R  R G+ +E   F+E MV  G  PD++ CT LI+   +  K+ KA RVMEILE  G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 104 -PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  YN LISG+CK  +I  A ++LDR+     SPDVVTYN ++ +LC  G ++ A +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V D+ ++  C P VITYTILI+AT  E    +AMKLLDEM                 G+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +A +F+  + S GCQP+VI++N++LR++ + G+W + EK + EMI +G  P+VV
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ILI+ LCR G    A+DVL    + G TP++ SY+PL+ A CKD +++ AIE+LD M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S GC PDIV YNT+L A CK+G  D A+EI  +L   GC P + +YNT+   L   G  
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ ++ EM  KG++PD ITY++L+  L R+G VDEA+    D+E    +P  I+YN I
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           +LG CK R+   +I+ LA M  +GCKP ET+Y++LIEG+ Y G   EA+EL N L S   
Sbjct: 534 MLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593

Query: 506 ISRDTFKRLNRTFPL 520
           + + + +++    P 
Sbjct: 594 VKKSSAEQVVVKIPF 608


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/460 (43%), Positives = 302/460 (65%), Gaps = 21/460 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           +++  R G+ +E L F+E M+  G  PDV+ CT LI+ F +  K+ KA R+MEILE  G 
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 104 -PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  YN LI G+CK+ +I+ A +VL+R+     +PDVVTYN ++ SLC  G ++ A +
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V D+ L+  C P VITYTILI+AT  +    +AMKLLDEM                 G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +A +F+ ++ S GC+P+VI++N++LR++ + G+W + E+L+++M+ +G  P+VV
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ILI+ LCR      A+DVL    + G  P++ SY+PL+  +C++ ++D AIE+L+ M
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S GC PDIV YNT+L A CK+G  D A+EI  +LS  GC P + +YNT+   L   G  
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ ++ EM  KG++PD ITY++L+  L R+G VDEA+ +  DME    +P+ ++YN I
Sbjct: 470 EYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAI 529

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +LG CK ++ + +I+ LA M EKGCKP E TY +LIEGI 
Sbjct: 530 MLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 145/249 (58%), Gaps = 3/249 (1%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+ LR L+  G+ EEG K +  MI +G  P+V+  + LI   CR GKT+ A  ++   + 
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  PD  +Y+ LI  YCK G +D A+E L+ M      PD+V YNTIL + C +G   +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+E+ ++     C P+V +Y  +  A  +     +A+ ++ EM  KG +PD +TYN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            +C++G +DEA+  L +M S   +P VI++NII+   C T R  ++  +L+ M  KGC P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 473 NETTYVLLI 481
           +  T+ +LI
Sbjct: 347 SVVTFNILI 355



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 173/338 (51%), Gaps = 19/338 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+ +       +++  ++ M   GCKPDVV    LI    +E + ++A++ +  +  YG
Sbjct: 249 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 308

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  +N ++   C   +   A ++L  +  +G SP VVT+NI+I  LC + ++  A 
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V +++ +  C P  ++Y  L+                   G C++  + +A +++  + 
Sbjct: 369 DVLEKMPKHGCVPNSLSYNPLLH------------------GFCQEKKMDRAIEYLEIMV 410

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           SRGC PD+++YN LL  L   GK +   +++ ++ S+G  P ++TY+ +I  L + GKTE
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            AV++L   + KGL PD  +Y  L+    ++G++D AI+    M      P  V YN I+
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              CK     +A++    + + GC P  ++Y  +   +
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%)

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +E   N  +  L R+G ++E +  L  M      P VI+   +I GFC++ +  ++  ++
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   G  P+  TY +LI G    G   +A+E+
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/460 (43%), Positives = 299/460 (65%), Gaps = 21/460 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           +++  R G+ +E L F+E M+  G  PDV+ CT LI+ F +  K+ KA R+MEILE  G 
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 104 -PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  YN LI G+CK+ +I+ A +VL+R+     +PDVVTYN ++ SLC  G ++ A +
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V D+ ++  C P VITYTILI+AT  +    +AMKLLDEM                 G+C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +A +F+ ++   GCQP+VI++N++LR++ + G+W + E+L+ +M+ +G  P+VV
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ILI+ LCR      A+DVL    + G  P++ SY+PL+  +C++ ++D AIE+L+ M
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S GC PDIV YNT+L A CK+G AD A+EI  +LS  GC P + +YNT+   L   G  
Sbjct: 411 VSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM  KG++PD ITY++L+  L  +G VDEA+ +  DME    +P+ ++YN I
Sbjct: 471 EYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAI 530

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +LG CK ++ + +I+ LA M EKGCKP + TY +LIEGI 
Sbjct: 531 MLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 143/249 (57%), Gaps = 3/249 (1%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+ LR L+  G+ EEG K +  MI +G  P+V+  + LI   CR GKT  A  ++   + 
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  PD  +Y+ LI  YCK G +D A++ L+ M      PD+V YNTIL + C +G   +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+E+ ++     C P+V +Y  +  A  +     +A+ ++ EM  KG +PD +TYN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            +C++G +DEA+  L +M     +P VI++NII+   C T R  ++  +LA M  KGC P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 473 NETTYVLLI 481
           +  T+ +LI
Sbjct: 348 SVVTFNILI 356



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 171/338 (50%), Gaps = 19/338 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+ +       +++  ++ M   GCKPDVV    LI    +E + ++A++ +  +  YG
Sbjct: 250 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  +N ++   C   +   A ++L  +  +G SP VVT+NI+I  LC + ++  A 
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V +++ +  C P  ++Y  L+                   G C++  + +A +++  + 
Sbjct: 370 DVLEKMPKHGCMPNSLSYNPLLH------------------GFCQEKKMDRAIEYLEIMV 411

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           SRGC PD+++YN LL  L   GK +   +++ ++ S+G  P ++TY+ +I  L + GKTE
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A ++L   + KGL PD  +Y  L+     +G++D AI+    M      P  V YN I+
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              CK     +A++    + + GC P  ++Y  +   +
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/487 (39%), Positives = 294/487 (60%), Gaps = 28/487 (5%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++   R G+ DE+L     +V +  +PD   C  LIKK     ++ +A RV+        
Sbjct: 72  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG---- 123

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV AYNA+++G+C A Q++ A +++  +      PD  TYN +I  LC RG   +A  V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            D++LR  C P V+TYTIL++AT       +AMKLLDEM                 G+C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G V  A +F+++L S GC+P+ +SYN++L+ L    +WE+ E+LM EM  +G  PNVVT
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           +++LIS LCR G  E A++VL    + G TP++ SY+PL+ A+CK  ++D A+ FLD M+
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC PDIV+YNT+L A C++G  D A+E+  +L D GC P + SYNT+   L  +G   
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL +++EM+SKG++PD ITY+++ + LCR+  +++A+     ++    RP  + YN II
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 480

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           LG CK R  + +I++ A M   GC PNE+TY +LIEG+ Y G   EA +L + L S   +
Sbjct: 481 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540

Query: 507 SRDTFKR 513
            +    +
Sbjct: 541 RKSLINK 547


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/484 (40%), Positives = 288/484 (59%), Gaps = 26/484 (5%)

Query: 49  RAGKFDESLYFIESMVA-NGCKPDVV-MCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
           R G+ D++L  ++S+   N   P  V  C  LIKK     ++  A RV+        PDV
Sbjct: 79  RRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAA----SGPDV 134

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YNA+++G+C A Q++ A +++  +      PD  TYN +I  LC RG   +A  V + 
Sbjct: 135 MVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLED 191

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           + R  C P V+TYTIL++AT       +AMKLLDEM                 G+C++G 
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A +F+++L S GC+P+ +SYN++L+ L    +WE+ EKLM EM  +G  PNVVT+++
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LIS LCR G  E A++VL    + G TP++ SY+PL+ A+CK  ++  A+EF++ M+S G
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PDIV+YNT+L A C+NG  D A+E+  +L D GC P + SYNT+   L  +G    AL
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ EM SKG++PD ITY+++ S LCR+  ++EAV     ++    RPT   YN I+LG 
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           CK R  + +I++ A M   GC PNE+TY +L+EG+ Y G   EA EL   L S   +++ 
Sbjct: 492 CKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKK 551

Query: 510 TFKR 513
             K+
Sbjct: 552 LMKK 555



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 207/394 (52%), Gaps = 19/394 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+     G+   +L  +E M   GC PDVV  T L++   +     +A++++ E+ 
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD+  YN +++G C+  ++E A + L  L S G  P+ V+YNI++  L +    E
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+ +++    C P V+T+ +LI                    +C++G+V  A + + 
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISF------------------LCRRGLVEPAMEVLE 330

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC P+ +SYN LL       K  +  + +  M+SRG  P++V+Y+ L+++LCR+G
Sbjct: 331 QMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNG 390

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+++L   K+KG +P   SY+ +I    K G+   A+E LD M S G  PDI+ Y+
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYS 450

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI +  C+    ++A+  F K+ D+G  P  + YN +   L    +   A+ + + M+S 
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           G  P+E TY  L+  L  +G+V EA  L   + S
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEARELFAQLCS 544



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 181/340 (53%), Gaps = 18/340 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++ + +   + +++  ++ M   GC PD+V    ++    QE +   A+  ++ L  YG
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+  +YN ++ G   A + E A K+++ +  +G  P+VVT+N++I  LC RG++E A 
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +V +Q+ +  C P  ++Y  L+ A   + +  KAM+ ++ M                  +
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G V  A + +  L+ +GC P +ISYN ++  L   GK +E  +L+ EM S+GL+P++
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TYS + S LCR+ + E+AV      ++ G+ P A  Y+ ++   CK      AI+   Y
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           MIS GC+P+   Y  ++      G   +A E+F +L   G
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/484 (40%), Positives = 290/484 (59%), Gaps = 28/484 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVM--CTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
           R G  +E+L  +ESM  +G +P      C  LIKK     ++ +A RV+   E    PDV
Sbjct: 71  RRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE----PDV 124

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AYNA+++G+C   Q++ A +++  +      PD  TYN +I  LC RG   +A  V D 
Sbjct: 125 MAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDD 181

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +LR  C P V+TYTIL++AT       +AMKLLDEM                 G+C++G 
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A +F++SL S GC+P+ +SYN++L+ L    +WE+ EKLM EM  +G  PNVVT+++
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LIS LCR G  E A++VL    + G TP++ SY+P++ A+CK  ++D A+ F++ M+S G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PDIV+YNT+L A C+ G  D A+E+  +L D GC P + SYNT+   L  +G    AL
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +++EM++KG++PD ITY+++ S LCR+  ++EA+     ++    RP  + YN I+LG 
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           CK R  + +I++   M   GC PNE+TY +LIEG+ Y G   EA EL   L S   +S+ 
Sbjct: 482 CKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKG 541

Query: 510 TFKR 513
              +
Sbjct: 542 LINK 545



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 186/343 (54%), Gaps = 18/343 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++ + +   + +++  ++ M A GC PD++    ++    QE + + A+  ++ L 
Sbjct: 194 YTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLP 253

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G EP+  +YN ++ G C A + E A K++  +  +G+ P+VVT+N++I  LC RG++E
Sbjct: 254 SHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVE 313

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +V DQ+ +  C P  ++Y  ++ A   + + D+AM  ++ M                
Sbjct: 314 PAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLL 373

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +C+ G V  A + +  L+ +GC P +ISYN ++  L   GK +E  +L+ EM+++GL+
Sbjct: 374 TALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQ 433

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++TYS + S LCR+ + E+A+      ++ G+ P+   Y+ ++   CK      AI+ 
Sbjct: 434 PDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
             YMIS+GC+P+   Y  ++      G   +A E+  +L   G
Sbjct: 494 FIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/514 (39%), Positives = 309/514 (60%), Gaps = 22/514 (4%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI 79
           +  E+ P+    S + +E++ ++ ++R  R G+ +E   F+E M   G  PDV+ CT LI
Sbjct: 63  NGVESSPDRVNTSLNFEESE-IRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALI 121

Query: 80  KKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
           ++F +  ++  A ++M ILE+ G   DV +YN LISG+CK+ +IE A +VLDR+   G S
Sbjct: 122 REFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVS 178

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P+  TY+ ++ SLC RG ++ A +V  + L+  C P V+T T+LI AT  E    +AMKL
Sbjct: 179 PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 238

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            +EM                 G CK G + +A +F++ L S GCQPDVIS+NM+LR+L +
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+W +  KL+  M+ +G  P+VVT++ILI+ LC+ G    A++VL    + G TP++ S
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++PLI  +C    +D AIE+L+ M+S GC PDIV YN +L A CK+G  D A+ I  +LS
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             GC P++ SYNT+   L   G    A+ ++ EM  KG++PD IT  S++  L R+G V 
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA+     ++    RP    YN II G CK+++ + +I+ LA M  KGCKP E TY  LI
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538

Query: 482 EGIGYGGWRAEAMELANALVSMHAISRDTFKRLN 515
           +GI Y G   +A +L+N L S   + R   ++++
Sbjct: 539 KGITYEGLAEDASKLSNELYSRGLVKRSLVEKVS 572


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 290/478 (60%), Gaps = 27/478 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVV-MCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVF 107
           R G  +E++  +ESM   G +P     C  LIKK     ++ +A RV+   E    PDV 
Sbjct: 68  RRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLASCE----PDVM 121

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YNA+++G+C   Q++ A +++  +      PD  TYN +I  LC RG  ++A  V D +
Sbjct: 122 SYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDM 178

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           LR  C P V+TYTIL++AT       +A+KLLDEM                 G+C++G V
Sbjct: 179 LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV 238

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +F++SL S GC+P+ +SYN++L+ L    +WE+ EKLM EM  +G  PNVVT+++L
Sbjct: 239 DDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNML 298

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS LCR G  E A+++L    + G TP++ SY+P++ A+CK  ++D A+ F++ M+S GC
Sbjct: 299 ISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGC 358

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PDIV+YNT+L A C+ G  D A+E+  +L D GC P + SYNT+   L  +G    AL 
Sbjct: 359 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALE 418

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++EM++KG++PD ITY+++ S LCR+G ++EA+     ++    RP  + YN I+LG C
Sbjct: 419 LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           K R  + +I++   M   GC PNE+TY +LIEG+ Y G   EA E+   L S   +S+
Sbjct: 479 KRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSK 536



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 211/412 (51%), Gaps = 27/412 (6%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C+  + +   R+ ++    P+T+          +  LI+     G+ D +L  ++ M+  
Sbjct: 131 CVTGQLDNARRLVAAMPMEPDTY---------TYNTLIRGLCGRGRTDNALAVLDDMLRR 181

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           GC PDVV  T L++   +     +AV+++ E+ +K   PD+  YN +++G C+  +++ A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            + L  L S G  P+ V+YNI++  LC+    E A K+  ++ R    P V+T+ +LI  
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
               G  + AM++LD++                   CK+  + +A  FV  + S GC PD
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           ++SYN LL  L   G+ +   +L+ ++  +G  P +++Y+ +I  L + GKTE+A+++L 
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               KGL PD  +Y  + S  C++GR++ AI+    +   G  P+ V YN IL   CK  
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRR 481

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
               A+++F  +   GC PN S+Y  +   L   G    A  M++E+ S+G+
Sbjct: 482 ATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/476 (39%), Positives = 287/476 (60%), Gaps = 28/476 (5%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++   R G+ DE+L     +V +  +PD   C  LIKK     ++ +A RV+        
Sbjct: 74  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG---- 125

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV AYNA+++G+C A Q++ A +       R    D  T + +I  LC RG   +A  V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            D++LR  C P V+TYTIL++AT       +AMKLLDEM                 G+C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G V  A +F+++L S GC+P+ +SYN++L+ L    +WE+ E+LM EM  +G  PNVVT
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           +++LIS LCR G  E A++VL    + G +P++ SY+PL+ A+CK  ++D A+ FLD M+
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC PDIV+YNT+L A C++G  D A+E+  +L D GC P + SYNT+   L  +G   
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL +++EM+SKG++PD ITY+++ + LCR+  +++A+     ++    RP  + YN II
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           LG CK R  + +I++ A M   GC PNE+TY +LIEG+ Y G   EA +L + L S
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 538



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 190/363 (52%), Gaps = 19/363 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++ + +   + +++  ++ M   GC PD+V    ++    QE + + A+  ++ L 
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG EP+  +YN ++ G C A + E A +++  +  +G  P+VVT+N++I  LC +G++E
Sbjct: 258 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 317

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +V +Q+ +  C P  ++Y  L+ A   + + DKAM  LD M                
Sbjct: 318 PALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM---------------- 361

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              SRGC PD++SYN LL  L   G+ +   +L+ ++  +G  P +++Y+ +I  L + G
Sbjct: 362 --VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           KT++A+++L     KGL PD  +Y  + +  C++ R++ AI     +   G  P+ V YN
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+   CK      A+++F  +   GC PN S+Y  +   L   G    A  ++ E+ S+
Sbjct: 480 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539

Query: 399 GIE 401
           G E
Sbjct: 540 GEE 542


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 298/518 (57%), Gaps = 25/518 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R S  A    NT   S + +E++   L  R  R G+ +E   F+E M   G  PDVV CT
Sbjct: 53  RFSKGALNGVNT---SLNFEESEIHHLC-RLIRNGELEEGSRFLEYMTNKGKIPDVVACT 108

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI++F +  ++  A R+M ILE+ G   D  +YN LI+ +CK+ +IE A +VLD     
Sbjct: 109 ALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDH---T 165

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
             +P+  TY+ ++ SLC RG ++ A +V D+ L+  C P V+T T+LI AT  E    +A
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           MKL +EM                 G CK+G + +A  F++ L S GCQ DVIS+NM+LR+
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L + G+W +  KL+  M+ +G  P+VVT++ILI+ LC+ G    A++VL    + G TP+
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           + S++PLI  +C    +D AIE L+ M+S GC PDIV YN +L A CK+G  D A+ I  
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +LS  GC P++ SYNT+   L   G    A+ ++ EM  KG++PD IT  S++  L R+G
Sbjct: 406 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 465

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            V EA+     ++    +P    YN I++G CK ++ + +I+ L  M   GCKP E +Y 
Sbjct: 466 KVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYT 525

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNR 516
            LI+GI Y G   EA +L+N L S   + +    ++++
Sbjct: 526 TLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQ 563


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 174/413 (42%), Positives = 261/413 (63%), Gaps = 20/413 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AYNA+++G+C A Q++ A +++  +      PD  TYN +I  LC RG   +A  V D+
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +LR  C P V+TYTIL++AT       +AMKLLDEM                 G+C++G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A +F+++L S GC+P+ +SYN++L+ L    +WE+ E+LM EM  +G  PNVVT+++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LIS LCR G  E A++VL    + G TP++ SY+PL+ A+CK  ++D A+ FLD M+S G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PDIV+YNT+L A C++G  D A+E+  +L D GC P + SYNT+   L  +G    AL
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +++EM+SKG++PD ITY+++ + LCR+  +++A+     ++    RP  + YN IILG 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           CK R  + +I++ A M   GC PNE+TY +LIEG+ Y G   EA +L + L S
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 215/414 (51%), Gaps = 19/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+     G+   +L  ++ M+   C PDVV  T L++   +     +A++++ E+ 
Sbjct: 35  YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD+  YN +++G C+  +++ A + L  L S G  P+ V+YNI++  LC+    E
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++  ++ +  C P V+T+ +LI                    +C+KG+V  A + + 
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISF------------------LCRKGLVEPALEVLE 196

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC P+ +SYN LL       K ++    +  M+SRG  P++V+Y+ L+++LCR G
Sbjct: 197 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 256

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + AV++L   K+KG  P   SY+ +I    K G+   A+E L+ M+S G  PDI+ Y+
Sbjct: 257 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 316

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI A  C+    + A+  F K+ D+G  PN   YN +   L    +   A+ + + M+  
Sbjct: 317 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 376

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           G  P+E TY  LI  L  +G++ EA  LL ++ S      ++  ++I + F  T
Sbjct: 377 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAFLTT 430



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 25/354 (7%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E   N      +     +  ++K    A +++++   +  M   GC P+VV   
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    ++     A+ V+E + KYG  P+  +YN L+  FCK  +++ A   LD + SR
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PD+V+YN ++ +LC  G ++ A ++  QL    C P +I+Y  +I      G+T +A
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++LL+EM                   S+G QPD+I+Y+ +   L    + E+  +   ++
Sbjct: 297 LELLNEM------------------VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN V Y+ +I  LC+  +T  A+D+       G  P+  +Y  LI     +G +
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAF------CKNGNADQALEIFEKLSDV 363
             A + LD + S      +++ + I  AF      C N N    L +  + S V
Sbjct: 399 KEARDLLDELCSRAGEEILLDVHLIDVAFLTTFLPCSNANGGPFLRLPPEGSPV 452


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  330 bits (847), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 156/388 (40%), Positives = 243/388 (62%), Gaps = 18/388 (4%)

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +VLDR   +   PDV+TY I+I + C+   +  A K+ D++    CKP V+TY +L+   
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN-- 59

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           GMCK+G + +A +F+ S+ S G QP+VI++N++LR++ + G+W 
Sbjct: 60  ----------------GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWM 103

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           + EKL+TEM+ +G  P+VVT++ILI+ LCR G    A+D+L      G TP++ SY+PL+
Sbjct: 104 DAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             +CK+ ++D AI++L+ M+S GC PDIV YNT+L A CK+G  D A+E+  +LS  GC 
Sbjct: 164 HGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P + +YNT+   L   G   +A+ ++ EM  KG++PD ITY+SLI+ L R+G V+EA+  
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             D+E    +P   +YN I+ G CK ++ + +I+ LA M  KGCKP E +Y +LIEGI  
Sbjct: 284 FHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343

Query: 487 GGWRAEAMELANALVSMHAISRDTFKRL 514
            G   EA+EL N L S   + + + +++
Sbjct: 344 EGLAKEALELLNELCSRGVVKKSSAEQV 371



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 206/366 (56%), Gaps = 19/366 (5%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
           C PDV+  T LI+    E    +A+++++ +   G +PDV  YN L++G CK  +++ A 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           K L+ + S G  P+V+T+NI++ S+CS G    A K+  +++R  C P+V+T+ ILI   
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF- 130

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                            +C+KG++G+A   +  + + GC P+ +SYN LL       K +
Sbjct: 131 -----------------LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMD 173

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
              + +  M+SRG  P++VTY+ ++++LC+DGK + AV++L     KG +P   +Y+ +I
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVI 233

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
               K G+ D A+E L  M   G  PD++ Y++++A   + G  ++A++ F  +   G  
Sbjct: 234 DGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVK 293

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PN  +YN++   L  +    RA+  ++ M+SKG +P E++Y  LI  +  +G+  EA+ L
Sbjct: 294 PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALEL 353

Query: 427 LVDMES 432
           L ++ S
Sbjct: 354 LNELCS 359



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 185/340 (54%), Gaps = 18/340 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+ +       +++  ++ M + GCKPDVV    L+    +E + ++A++ +  +  YG
Sbjct: 22  LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYG 81

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  +N ++   C   +   A K+L  +  +G SP VVT+NI+I  LC +G++  A 
Sbjct: 82  SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAI 141

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + +++    C P  ++Y  L+     E + D+A++ L+ M                  +
Sbjct: 142 DILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTAL 201

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G V  A + +  L S+GC P +I+YN ++  L  +GK ++  +L+ EM  +GL+P+V
Sbjct: 202 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TYS LI+ L R+GK E+A+      +  G+ P+A++Y+ ++   CK  + D AI+FL Y
Sbjct: 262 ITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAY 321

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           MIS GC P  V+Y  ++      G A +ALE+  +L   G
Sbjct: 322 MISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 123/219 (56%)

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           ++VL    EK   PD  +Y  LI A C +  +  A++ LD M S GC PD+V YN ++  
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G  D+A++    +   G  PNV ++N +  ++ S+G  + A  +++EM+ KG  P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+N LI+ LCR G++  A+ +L  M +    P  +SYN ++ GFCK ++++ +I+ L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +GC P+  TY  ++  +   G    A+EL N L S
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSS 219



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 18/239 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G    ++  +E M  +GC P+ +    L+  F +E+K ++A++ +EI+ 
Sbjct: 124 FNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMV 183

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN +++  CK  +++ A ++L++L S+G SP ++TYN +I  L   G  +
Sbjct: 184 SRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTD 243

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  ++     KP VITY+ LI     EG+ ++A+K   ++                
Sbjct: 244 QAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIM 303

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            G+CK     +A  F+  + S+GC+P  +SY +L+  + N G  +E  +L+ E+ SRG+
Sbjct: 304 FGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 172/472 (36%), Positives = 271/472 (57%), Gaps = 27/472 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G+ D +L  + S+  +G  P V+ C  LIKK   + +   A RV+E L       +  YN
Sbjct: 75  GELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSAT--IITYN 132

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +++G+C+A  I+ A +++D   S  F+PD  TYN +I +LC RG +  A  VFD +L  
Sbjct: 133 TMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHR 189

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C P+V+TY+IL+ AT  E    +A+ LLDEM                  MC +G VG+A
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEA 249

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + + SL S GC+PD ++Y  +L++L +  +WEE +KL+T+M S    P+ VT++ +I+S
Sbjct: 250 LKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITS 309

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI----EFLDYMISDG 329
           LC+ G    A  VL    E G TPD  +Y  ++   CK+ R+D AI    E L  M+S  
Sbjct: 310 LCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKN 369

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA-LWSSGDKIRA 388
           C+PD V +NTI+ + C+ G  D+A+++ +++S+ GC P++++YN +    L  S     A
Sbjct: 370 CIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEA 429

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +++ M+S G+ PD  TY SL   L R+  ++ A+G+   +++    P  + YN I+LG
Sbjct: 430 LDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLG 489

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            CK  R + +I+  A M   GC P+E+TY++L+EGI Y G+  EA EL   L
Sbjct: 490 LCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 23/342 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+  + +   + +++  ++ M + GC+PD+V    LI     +    +A++V+  L  YG
Sbjct: 201 LLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYG 260

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD   Y  ++   C + + E A+K+L ++ S   +PD VT+N +I SLC +G +  A 
Sbjct: 261 CKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRAT 320

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------- 202
           KV  Q+    C P +ITY+ ++     E + D+A+KLL E+                   
Sbjct: 321 KVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTI 380

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-NMGKWEEGEKLMTEMISRG 259
              +C+KG+  +A + V  +   GC PD+ +YN ++   L    K EE   L+  M+S G
Sbjct: 381 ITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNG 440

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L P+  TY  L   L R+ + E A+ + R  +  GL+PD   Y+ ++   CK  R DLAI
Sbjct: 441 LCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAI 500

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           +F  YM+S+GC+PD   Y  ++      G  ++A E+   LS
Sbjct: 501 DFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 172/360 (47%), Gaps = 28/360 (7%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N  +  L  RG ++ A ++   +      P VI   ILI+                   +
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKK------------------L 106

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V  A + V +L   G    +I+YN ++      G  +   +++    S    P+ 
Sbjct: 107 CADGRVADAERVVEAL---GPSATIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDT 160

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ LI +LC  G   DA+ V      +G +P   +Y  L+ A CK+     A+  LD 
Sbjct: 161 FTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDE 220

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M S GC PDIV YN ++ A C  G+  +AL++   L   GC P+  +Y  +  +L SS  
Sbjct: 221 MRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSER 280

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++++M S    PDE+T+N++I+ LC+ G V  A  +L  M      P +I+Y+ 
Sbjct: 281 WEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSS 340

Query: 445 IILGFCKTRRINESI----EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G CK RR++E+I    E+LA M  K C P++ T+  +I  +   G    A+++ + +
Sbjct: 341 IMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 22/288 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  ++K    + +++E+   +  M +N C PD V    +I    Q+    +A +V+  + 
Sbjct: 268 YTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMS 327

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS----PDVVTYNIMIGSLCSR 154
           ++G  PD+  Y++++ G CK  +++ A K+L  L +   S    PD VT+N +I SLC +
Sbjct: 328 EHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQK 387

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G+ + A KV D++    C P + TY  ++                    +CK     +A 
Sbjct: 388 GLFDRAIKVVDEMSEHGCIPDITTYNCIVDGF-----------------LCKSCKTEEAL 430

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             +  + S G  PD  +Y  L   L    + E    +   + + GL P+ + Y+ ++  L
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           C+  +T+ A+D        G  PD  +Y  L+     +G L+ A E L
Sbjct: 491 CKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 24/257 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  F  +I    + G    +   +  M  +GC PD++  + ++    +ER+ ++A++++ 
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLK 359

Query: 96  ----EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI-GS 150
               E++ K   PD   +N +I+  C+    + A KV+D +   G  PD+ TYN ++ G 
Sbjct: 360 ELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGF 419

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC     E A  + + ++ +   P   TY  L                    G+ ++  +
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL------------------AFGLSREDEM 461

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A    R +++ G  PD + YN +L  L    + +        M+S G  P+  TY IL
Sbjct: 462 ERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIIL 521

Query: 271 ISSLCRDGKTEDAVDVL 287
           +  +  +G  E+A ++L
Sbjct: 522 VEGIAYEGFLEEAKELL 538



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G LD A+  +  +   G  P ++  N ++   C +G    A  + E L   G    + +Y
Sbjct: 75  GELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITY 131

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NTM +    +G+   A  MI    S    PD  TYN LI  LC  G V +A+ +  DM  
Sbjct: 132 NTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P+V++Y+I++   CK     +++ +L  M  KGC+P+  TY +LI  +   G   E
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE 248

Query: 493 AMELANALVS 502
           A+++ N+L S
Sbjct: 249 ALKVLNSLPS 258


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 233/371 (62%), Gaps = 18/371 (4%)

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           ++  + + C    +  A K+ D++     KP V+TY +LI                   G
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN------------------G 126

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK+G + +A +F+ ++ S GCQP+VI++N++LR++ + G+W + EKL+++M+ +G  P+
Sbjct: 127 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 186

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           VVT++ILI+ LCR G    A+D+L      G TP++ SY+PL+  +CK+ ++D AIE+LD
Sbjct: 187 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 246

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+S GC PDIV YNT+L A CK+G  D A+EI  +LS  GC P + +YNT+   L   G
Sbjct: 247 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 306

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              RA+ ++ EM  KG++PD ITY+SL+S L R+G VDEA+    D+E    RP  I+YN
Sbjct: 307 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 366

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            I+LG CK+R+ + +I+ LA M  K CKP E TY +LIEGI Y G   EA++L N L S 
Sbjct: 367 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426

Query: 504 HAISRDTFKRL 514
             + + + +++
Sbjct: 427 GLVKKSSAEQV 437



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 196/350 (56%), Gaps = 19/350 (5%)

Query: 84  QERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +E    +A++++ E+  K  +PDV  YN LI+G CK  +++ A K L+ + S G  P+V+
Sbjct: 94  KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T+NI++ S+CS G    A K+   +LR  C P+V+T+ ILI                   
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF----------------- 196

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +C++G++G+A   +  +   GC P+ +SYN LL       K +   + +  M+SRG  P
Sbjct: 197 -LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 255

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++VTY+ L+++LC+DGK + AV++L     KG +P   +Y+ +I    K G+ + AI+ L
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M   G  PDI+ Y+++++   + G  D+A++ F  L  +G  PN  +YN++   L  S
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
               RA+  ++ M+SK  +P E TY  LI  +  +G+  EA+ LL ++ S
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 425



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 184/347 (53%), Gaps = 19/347 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           +++  ++ M   G KPDVV    LI    +E + ++A++ +  +  YG +P+V  +N ++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
              C   +   A K+L  +  +G SP VVT+NI+I  LC +G++  A  + +++    C 
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 219

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P  ++Y  L+                   G CK+  + +A +++  + SRGC PD+++YN
Sbjct: 220 PNSLSYNPLLH------------------GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            LL  L   GK +   +++ ++ S+G  P ++TY+ +I  L + GKTE A+ +L   + K
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           GL PD  +Y  L+S   ++G++D AI+F   +   G  P+ + YN+I+   CK+   D+A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           ++    +    C P  ++Y  +   +   G    AL +++E+ S+G+
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 146/281 (51%), Gaps = 19/281 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G++ ++   +  M+  GC P VV    LI    ++    +A+ ++E +  +G  P+  +
Sbjct: 165 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 224

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L+ GFCK  +++ A + LD + SRG  PD+VTYN ++ +LC  G ++ A ++ +QL 
Sbjct: 225 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 284

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
              C P +ITY  +I      G+T++A+KLLDEM                    +G +PD
Sbjct: 285 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM------------------RRKGLKPD 326

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +I+Y+ L+  L   GK +E  K   ++   G+ PN +TY+ ++  LC+  +T+ A+D L 
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
               K   P   +Y  LI     +G    A++ L+ + S G
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 19/257 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G    ++  +E M  +GC P+ +    L+  F +E+K ++A+  ++I+ 
Sbjct: 190 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 249

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN L++  CK  ++++A ++L++L S+G SP ++TYN +I  L   G  E
Sbjct: 250 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 309

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+ D++ R   KP +ITY+ L+     EG+ D+A+K                  F  
Sbjct: 310 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK------------------FFH 351

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            LE  G +P+ I+YN ++  L    + +     +  MIS+  +P   TY+ILI  +  +G
Sbjct: 352 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 411

Query: 279 KTEDAVDVLRAAKEKGL 295
             ++A+D+L     +GL
Sbjct: 412 LAKEALDLLNELCSRGL 428


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 169/495 (34%), Positives = 266/495 (53%), Gaps = 28/495 (5%)

Query: 47  SFRAGKFDE---------SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           ++R G+ D+         +   +E +V  G KP+V   T+L+    +  K+ KAVRVME+
Sbjct: 65  NWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEM 124

Query: 98  LEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +   G  PD  +Y  L++  CK   +  A ++++++   GF  + VTYN ++  LC  G 
Sbjct: 125 MVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGN 184

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  + ++ D+L +    P   TY+ L++A   E   D+AMKLLD++              
Sbjct: 185 LNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNV 244

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK+G   +A +  + L  +G  P V+S+N+LLR+L   G+WEE  +L+ EM    
Sbjct: 245 LLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKED 304

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P+VVTY+ILI+SL  +G+TE A  VL      G    A SY+P+I+  CK+G++DL +
Sbjct: 305 QPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVL 364

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + LD MI   C P+   Y+ I +   + G   +A  I + L      P    Y  + ++L
Sbjct: 365 KCLDQMIHRRCHPNEGTYSAI-SMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASL 423

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+   A  M+ EM   G  PD  TY+SLI  +CR+GM+DEA+ +   +E    RP +
Sbjct: 424 CRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDI 483

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            +YN +ILGFCK +R + SIE+   M  KGC PNE TY +L+EG+ +      A +L   
Sbjct: 484 DNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKE 543

Query: 500 LVSMHAISRDTFKRL 514
           L     +S+ T +RL
Sbjct: 544 LYLKKVLSQSTVERL 558



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 15/337 (4%)

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
           + ++A +LL ++  CK     +A + +  +   G  PD  SY  L+  L   G      +
Sbjct: 98  EVNQATQLLYDL--CKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQ 155

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+ +M   G   N VTY+ L+  LC  G    ++ +L    +KGL P+A++Y  L+ A  
Sbjct: 156 LVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAY 215

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K+  +D A++ LD +I+ G  P++V+YN +L   CK G  ++A+++F++L   G  P+V 
Sbjct: 216 KERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVV 275

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           S+N +  +L   G    A  +++EM  +   P  +TYN LI+ L  +G  ++A  +L +M
Sbjct: 276 SFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEM 335

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
             + F+ +  SYN II   CK  +++  ++ L  M  + C PNE TY   I  +   G  
Sbjct: 336 TRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYS-AISMLSEQGKV 394

Query: 491 AEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEI 527
            EA  +  +L S             + FP+ D YK +
Sbjct: 395 QEAFFIIQSLGS------------KQNFPMHDFYKNL 419



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 154/289 (53%), Gaps = 20/289 (6%)

Query: 238 TLLNMGKW------EEGEKL--------MTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           T+ N+  W      ++G++L        +  ++ +G +P V   + L+  LC+  K   A
Sbjct: 59  TIFNLPNWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKA 118

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V V+      G+ PDA SY  L++  CK G +  AI+ ++ M   G   + V YNT++  
Sbjct: 119 VRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKG 178

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +GN +Q+L++ ++L+  G  PN  +Y+ +  A +       A+ ++ ++++KG EP+
Sbjct: 179 LCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPN 238

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ++YN L++ LC++G  +EA+ L  ++    F P+V+S+NI++   C   R  E+ E+LA
Sbjct: 239 LVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLA 298

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
            M ++   P+  TY +LI  +   G   +A ++      +  ++R  FK
Sbjct: 299 EMDKEDQPPSVVTYNILITSLSLNGRTEQAFKV------LDEMTRSGFK 341



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G    +   +  M   G  PD    + LI+   +E   ++A+++  ILE
Sbjct: 416 YKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILE 475

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +    PD+  YNALI GFCKA + +L+ ++   + ++G  P+  TY I++  L
Sbjct: 476 ENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGL 528


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 181/556 (32%), Positives = 293/556 (52%), Gaps = 44/556 (7%)

Query: 2   STVVSCINPKSN---ERVRVSSSAETR-PNTHLLSFD------VKETQFMKLIKRS---- 47
           +++V  ++P +N   E  R++    +  PN H  S +      +  TQ     K S    
Sbjct: 2   ASLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVITL 61

Query: 48  --FRAGKFDE---------SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
             +R+GK D+         + + +E +V NG KPDVV  T+L+    +  K  KA+RVME
Sbjct: 62  PNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVME 121

Query: 97  ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++   G  PD  +Y  L++  CK   +  A ++++++   G+  + VTYN ++  LC  G
Sbjct: 122 MMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHG 181

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  + +  D+L++    P   TY+ L++A   E   ++AM+LLDE+             
Sbjct: 182 NLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYN 241

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK+G + +A +  ++L S+G  P+V+SYN+LLR+L   G+WEE  +L+ EM  R
Sbjct: 242 VLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGR 301

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              P++VTY+ILI SL   GK E A+ V+         P A SY+P+I+  CK+G+++  
Sbjct: 302 ERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAV 361

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +  LD MI   C P+   +N I A  C  G   +A  + + L +         Y  + S 
Sbjct: 362 VNCLDQMIFGRCSPNEGTFNAI-AVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSC 420

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G+   A  ++ EM   G  PD  TY+SLI  LC +GM+ EA+ +   +E   +RP 
Sbjct: 421 LCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPD 480

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           + ++N +ILGFCK+ R + S+EV   M EKG  P+ETTY +L+EGI +   +  A E+  
Sbjct: 481 IDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLR 540

Query: 499 ALVSMHAISRDTFKRL 514
            L     +S+ T +RL
Sbjct: 541 ELHLRQVMSQSTVERL 556


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 166/481 (34%), Positives = 262/481 (54%), Gaps = 19/481 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYN 110
           + +++ + +E +V  G KPDV   T+L+    +  K  KA RVME+  + G  PD  +Y 
Sbjct: 77  RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L++  CK   I  A ++++++   G   + VTYN ++  LC  G +  + ++ D+L+R 
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P   T++ L++A   E   D+AMKLLD +                 G+CK+G   +A
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            QF R L S+G  P+V+S N++LR+L   G+WEE  +L+ EM S    P++VTY+ILI S
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGS 316

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L   G+ + A  VL         P A +++P+IS  CK+G+ DL ++ LD MI   C P+
Sbjct: 317 LASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPN 376

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              +N I A  C+ G   +A  I + L +         Y  + S+L   G+   A  ++ 
Sbjct: 377 DGTFNAI-AVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLY 435

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+  G  PD  TY+SLI  LC +GM+DEA+ +   +E   +RP + ++N +ILGFCK+ 
Sbjct: 436 EMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSG 495

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           R + S+E+   M  KG  PNETTY +L+EGI +   +  A E+   L     + R+T +R
Sbjct: 496 RTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVMRRNTVER 555

Query: 514 L 514
           L
Sbjct: 556 L 556



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 173/335 (51%), Gaps = 17/335 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++ +++    DE++  ++ ++A G KP++V    L+    +E ++ +A++    L   G
Sbjct: 208 LLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKG 267

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V + N ++   C   + E AN+++  + S   SP +VTYNI+IGSL S G I+ AF
Sbjct: 268 FNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAF 327

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
           +V D+++R + +P+  T+  +I     EG+ D  +K LD+M                 +C
Sbjct: 328 QVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVLC 387

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G V +AF  ++SL ++        Y  ++ +L   G      +L+ EMI  G  P+  
Sbjct: 388 EGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPY 447

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS LI  LC +G  ++A+++ R  +E    P   +++ LI  +CK GR DL++E  + M
Sbjct: 448 TYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMM 507

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           I  G  P+   Y  ++         + A E+ ++L
Sbjct: 508 ILKGYTPNETTYTILVEGIAHEEEKELAAEVLKEL 542



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 11/258 (4%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD +  DA   L     KG  PD      L+   CK  ++  A   ++  I  G +PD  
Sbjct: 74  RDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAA 133

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y  ++   CK GN   A+++ EK+ + GCP N  +YN++   L   G+  ++L ++ ++
Sbjct: 134 SYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKL 193

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + KG+ P+E T++ L+    ++  VDEA+ LL  + +   +P ++SYN+++ G CK  R 
Sbjct: 194 MRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL---------ANALVSMHAI 506
            E+I+    +  KG  PN  +  +++  +   G   EA EL         + +LV+ + +
Sbjct: 254 EEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNIL 313

Query: 507 --SRDTFKRLNRTFPLLD 522
             S  +  R+   F +LD
Sbjct: 314 IGSLASHGRIQHAFQVLD 331


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 169/481 (35%), Positives = 260/481 (54%), Gaps = 20/481 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYN 110
           +  ++ + +E MV  G KPDV   T+L+    +  K  KA++VME++   G  PD  +Y 
Sbjct: 77  RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+S  C+   +  A +++D++   G+  + VTYN ++  LC  G +  + ++ D+L++ 
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK 196

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P   TY+ L++A   E   D+A KLLDE+                 G+CK+G    A
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDA 256

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  R L S+G  P+V+SYN+LLR+L N G+WEE   L+ EM      P+ VTY+ILI S
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L   G+TE A++VL         P A SY+P+I+  CKDG+LDL ++ LD M+   C P+
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              YN I A  C+ G   +A  I + L +         Y  + ++L   G+   A  ++ 
Sbjct: 377 EGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLY 435

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM   G  PD  TY+SLI  LC +GM++EA+ +   ME    +P   +YN +ILG CK+R
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSR 494

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           R + +++V   M  KG  PNETTY +L+EGI +      A ++   L     IS+ T +R
Sbjct: 495 RTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLER 554

Query: 514 L 514
           L
Sbjct: 555 L 555



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 192/363 (52%), Gaps = 20/363 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G   +SL  ++ ++  G  P+    + L++  ++ER +++A +++ EI+ K GEP++ +Y
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++G CK  + E A ++   L S+GFSP+VV+YNI++ SLC+ G  E A  +  ++  
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           D   P+ +TY ILI +  L G+T+ A+++L+EM                  +CK G +  
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             + +  +  R C P+  +YN  + TL   G  +E   ++  + ++        Y I+I+
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVIT 419

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           SLCR G T  A  +L    + G TPD+++Y  LI   C +G L+ AIE    M  +   P
Sbjct: 420 SLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKP 478

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D  NYN+++   CK+   D AL++FE +   G  PN ++Y  +   +    +   A  ++
Sbjct: 479 DTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVL 538

Query: 393 SEM 395
            E+
Sbjct: 539 REL 541



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 9/333 (2%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK   + +A + +  +   G  PD  SY  L+ +L   G      +L+ +M   G   N
Sbjct: 107 LCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            VTY+ L+  LC  G    ++ +L    +KGL P+AY+Y  L+ A  K+   D A + LD
Sbjct: 167 TVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            +I+ G  P++V+YN +L   CK G  + A+ +F +L   G  PNV SYN +  +L + G
Sbjct: 227 EIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEG 286

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +++EM      P  +TYN LI  L   G  + A+ +L +M   RF+PT  SYN
Sbjct: 287 RWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYN 346

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS- 502
            II   CK  +++  ++ L  M  + C PNE TY   I  +   G   EA  +  +L + 
Sbjct: 347 PIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYN-AIATLCEEGMVQEAFSIIQSLGNK 405

Query: 503 MHAISRDTFK-------RLNRTFPLLDVYKEIS 528
            H+ +++ +K       R   T+P   +  E++
Sbjct: 406 QHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMT 438



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 96/192 (50%)

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K+ RL  A   L++M+  G  PD+     +L   CK     +A+++ E +   G  P+ S
Sbjct: 74  KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           SY  + S+L   G+   A+ ++ +M   G   + +TYNSL+  LC  G + +++ LL  +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P   +Y+ ++    K R  +E+ ++L  +  KG +PN  +Y +L+ G+   G  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253

Query: 491 AEAMELANALVS 502
            +A+ L   L S
Sbjct: 254 EDAIRLFRELPS 265



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 39  QFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           +F K++  S  R G    +   +  M   G  PD    + LI+    E   N+A+ +  +
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSV 471

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +E+  +PD   YN+LI G CK+ + +LA  V + +  +G+ P+  TY I++  +     +
Sbjct: 472 MEENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEM 531

Query: 158 ESAFKVFDQL-LRD 170
           + A KV  +L LRD
Sbjct: 532 DLATKVLRELQLRD 545


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/485 (34%), Positives = 267/485 (55%), Gaps = 27/485 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYN 110
           + +++  ++E M+  G KPD    T+L+ +  +  K  KA +VME++   G  PD  +  
Sbjct: 77  RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L++  CK   +  A ++++++   G+  + VTYN ++  LC  G +  + ++ D+ ++ 
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKK 196

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P V TY+ L++A   E   D+A++LLDE+                 G+CK+G   +A
Sbjct: 197 GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            QF R L S+G  P+V+SYN+LLR+L   G+WE+ ++L+ EM      P++VT++ILI S
Sbjct: 257 MQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGS 316

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L   G+T+ A++VL           A SY+P+I+  CK+G++DL ++ LD M+   C P+
Sbjct: 317 LALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPN 376

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              YN I A  C+ G   +A  I + L +         Y  + S+L   G+   A  ++ 
Sbjct: 377 EGTYNAI-AVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLY 435

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM   G  PD  TY+SLI  LC +GM+DEA+ +   ME    RP V ++N +ILG CK R
Sbjct: 436 EMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCR 495

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS----MHAISRD 509
           + + S+ V   M +KG  PNETTY +++EGI +     E MELA A++       A+ R 
Sbjct: 496 KTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAH----QEEMELAAAVLKELYLRQAVGRS 551

Query: 510 TFKRL 514
           T +RL
Sbjct: 552 TLERL 556



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 114/221 (51%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD +  DA   L     KG  PD      L+   CK  ++  A + ++ MI  G  PD  
Sbjct: 74  RDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPA 133

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +   ++   CK GN   A+++ EK+ + G P N  +YN++   L   G+  ++L ++ + 
Sbjct: 134 SCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKF 193

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + KG+ P+  TY+ L+    ++   DEA+ LL ++ +   +P ++SYN+++ G CK  R 
Sbjct: 194 MKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+++    +  KG  PN  +Y +L+  + Y G   +A EL
Sbjct: 254 EEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKEL 294



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 95/192 (49%)

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +D RL+ A  +L+YMI  G  PD      ++   CK+    +A ++ E +   G  P+ +
Sbjct: 74  RDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPA 133

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           S   + + L   G+   A+ ++ +M   G   + +TYNSL+  LC  G + +++ +L   
Sbjct: 134 SCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKF 193

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P V +Y+ ++    K R  +E+I +L  +  KG KPN  +Y +L+ G+   G  
Sbjct: 194 MKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 491 AEAMELANALVS 502
            EAM+    L S
Sbjct: 254 EEAMQFFRDLPS 265


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 222/362 (61%), Gaps = 18/362 (4%)

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C R   + A K+ D++    C P ++TY +++                   G+C++G V 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN------------------GICQEGRVD 44

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A +F+++L S GC+P+ +SYN++L+ L    +WE+ E+LM EM  +G  PNVVT+++LI
Sbjct: 45  DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 104

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S LCR G  E A++VL    + G TP++ SY+PL+ A+CK  ++D A+ FLD M+S GC 
Sbjct: 105 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 164

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDIV+YNT+L A C++G  D A+E+  +L D GC P + SYNT+   L  +G    AL +
Sbjct: 165 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 224

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           ++EM+SKG++PD ITY+++ + LCR+  +++A+     ++    RP  + YN IILG CK
Sbjct: 225 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            R  + +I++ A M   GC PNE+TY +LIEG+ Y G   EA +L + L S   + +   
Sbjct: 285 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 344

Query: 512 KR 513
            +
Sbjct: 345 NK 346



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 178/333 (53%), Gaps = 17/333 (5%)

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           CK +  + A K+LD +R +G +PD+VTYN+++  +C  G ++ A +    L    C+P  
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRS 219
           ++Y I+++      + + A +L+ EMG                 +C+KG+V  A + +  
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +   GC P+ +SYN LL       K ++    +  M+SRG  P++V+Y+ L+++LCR G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + AV++L   K+KG  P   SY+ +I    K G+   A+E L+ M+S G  PDI+ Y+T
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I A  C+    + A+  F K+ D+G  PN   YN +   L    +   A+ + + M+  G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             P+E TY  LI  L  +G++ EA  LL ++ S
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCS 335



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 181/334 (54%), Gaps = 19/334 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R+G + +++  ++ M   GC PD+V    ++    QE + + A+  ++ L  YG EP+  
Sbjct: 5   RSG-YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN ++ G C A + E A +++  +  +G  P+VVT+N++I  LC +G++E A +V +Q+
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +  C P  ++Y  L+ A   + + DKAM  LD M                  +C+ G V
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  L+ +GC P +ISYN ++  L   GK +E  +L+ EM+S+GL+P+++TYS +
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
            + LCR+ + EDA+      ++ G+ P+   Y+ +I   CK      AI+   YMI +GC
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +P+   Y  ++      G   +A ++ ++L   G
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 151/314 (48%), Gaps = 19/314 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E   N      +     +  ++K    A +++++   +  M   GC P+VV   
Sbjct: 42  RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 101

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    ++     A+ V+E + KYG  P+  +YN L+  FCK  +++ A   LD + SR
Sbjct: 102 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PD+V+YN ++ +LC  G ++ A ++  QL    C P +I+Y  +I      G+T +A
Sbjct: 162 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 221

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++LL+EM                   S+G QPD+I+Y+ +   L    + E+  +   ++
Sbjct: 222 LELLNEM------------------VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN V Y+ +I  LC+  +T  A+D+       G  P+  +Y  LI     +G +
Sbjct: 264 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 323

Query: 316 DLAIEFLDYMISDG 329
             A + LD + S G
Sbjct: 324 KEARDLLDELCSRG 337



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 19/222 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    +  K D+++ F++ MV+ GC PD+V    L+    +  + + AV ++  L+
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 194

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P + +YN +I G  KA + + A ++L+ + S+G  PD++TY+ +   LC    IE
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A + F ++     +P  + Y  +I                  +G+CK+     A     
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAII------------------LGLCKRRETHSAIDLFA 296

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            +   GC P+  +Y +L+  L   G  +E   L+ E+ SRG+
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 338


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  298 bits (763), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 270/512 (52%), Gaps = 32/512 (6%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE-SMVANG 67
           NPK +    ++++A TRP +  ++ +    +  +LI R   AG    +   +E S   +G
Sbjct: 18  NPKPHH---LAAAAATRPESPNVAPNPASARLRRLIAREDLAG----AARLVELSASRDG 70

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELAN 126
             PDV +CTKLI+   +  +++ A RV+   E  G P DVFAYN L++G+C+   ++ A 
Sbjct: 71  EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR 130

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +++    S   +PD  TY  +I  LC RG +  A  + D +LR  C+P V+TYT+L++A 
Sbjct: 131 RLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 187

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
                 ++AM +LDEM                 GMC++G V  A   +  L S GCQPD 
Sbjct: 188 CKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDT 247

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY  LL+ L    +W++ E+L  EM+ +   PN VT+ +LI   CR G  E A+ VL+ 
Sbjct: 248 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQ 307

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E     +    + +I++ CK GR+D A +FL+ M S GC PD ++Y T+L   C+   
Sbjct: 308 MTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAER 367

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + A E+ +++    CPPN  ++NT    L   G   +A+ +I +M   G     +TYN+
Sbjct: 368 WNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNA 427

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L++  C  G +D A+ L   M     +P  I+Y  ++ G C   R++ + E++A M  + 
Sbjct: 428 LVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD 484

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           C PN  T+ +L+      G+  EA+EL   ++
Sbjct: 485 CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516



 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 274/520 (52%), Gaps = 50/520 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+     G+  ++L  ++ M+  GC+P+VV  T L++   +     +A+ V++ + 
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR 204

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +I+G C+  +++ A  +L+RL S G  PD V+Y  ++  LC+    +
Sbjct: 205 AKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWD 264

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++F +++  NC P  +T+ +LI+     G  ++A+++L +M                
Sbjct: 265 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVI 324

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G V  AF+F+ ++ S GC PD ISY  +L+ L    +W + ++L+ EM+     
Sbjct: 325 NSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCP 384

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG-------- 313
           PN VT++  I  LC+ G  E A+ ++   +E G T    +Y+ L++ +C  G        
Sbjct: 385 PNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALEL 444

Query: 314 ------------------------RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                   RLD A E +  M+   C P++V +N ++  FC+ G 
Sbjct: 445 FRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+E+ E++ + GC PN+ +YNT+F  +        AL ++  ++SKG+ PD IT++S
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  L ++  V+EA+ +    +    RP  + YN I+LG CK   I+ +I+ LA M   G
Sbjct: 565 IIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNG 624

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           C PNE+TY++LIEG+   G   EA +L + L S   +S++
Sbjct: 625 CMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKN 664



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 4/277 (1%)

Query: 236 LRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LR L+         +L+    SR G  P+V   + LI +LCR G+T DA  VLRAA+  G
Sbjct: 46  LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 105

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D ++Y+ L++ YC+ G LD A   +  M      PD   Y  ++   C  G    AL
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADAL 162

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + + +   GC PNV +Y  +  A+  +    +A+ ++ EM +KG  P+ +TYN +I+ +
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           CR+G VD+A  LL  + S   +P  +SY  ++ G C ++R ++  E+ A M EK C PNE
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            T+ +LI     GG    A+++   +      +  T 
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 3/297 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++ + G A     S    G  PDV     L+R L   G+  +  +++      G   +V 
Sbjct: 52  REDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 111

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ L++  CR G  + A    R      + PDAY+Y PLI   C  GR+  A+  LD M
Sbjct: 112 AYNTLVAGYCRYGHLDAA---RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 168

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  GC P++V Y  +L A CKN   +QA+ + +++   GC PN+ +YN + + +   G  
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 228

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +++ + S G +PD ++Y +L+  LC     D+   L  +M      P  ++++++
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I  FC+   +  +I+VL  M E  C  N T   ++I  I   G   +A +  N + S
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 159/443 (35%), Positives = 250/443 (56%), Gaps = 19/443 (4%)

Query: 90  KAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           KA RVME++ + G  PD  +Y  L++  CK   I  A ++++++   G+  + VTYN ++
Sbjct: 3   KATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLV 62

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
             LC  G +  + ++ D+L+     P   TY+ L++A   E   ++AMKLLDE+      
Sbjct: 63  RGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ 122

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G+CK+G   +A +F R L S+G  P+V+SYN++LR+L + G+WEE  +L
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL 182

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
           + EM S    P++VTY+ILI SL   G+ E A +VL         P A +Y+P+I+  CK
Sbjct: 183 LAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCK 242

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           +G+LDL I+ LD MI   C P+   +N I A  CK G   +A  I + L +         
Sbjct: 243 EGKLDLVIKCLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPEAFSIIQNLGNKQRSSTHDF 301

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y  + ++L   G+   A  ++ EM   G  PD  TY+SLI  LC +GM+DEA+ +   +E
Sbjct: 302 YKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLE 361

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
              +RP + ++N +ILGFCK+ R + S+++L  M EKG  PNETTY +++EGI +   + 
Sbjct: 362 ENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKE 421

Query: 492 EAMELANALVSMHAISRDTFKRL 514
            A E+   L+    + R+T +RL
Sbjct: 422 LAAEVLKELLLRQVMRRNTAERL 444



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 190/368 (51%), Gaps = 19/368 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G  ++SL  ++ ++  G  P+    + L++  ++ER  N+A++++ EI+ K  +P++ +Y
Sbjct: 69  GNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSY 128

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++G CK  + E A +    L S+GF+P+VV+YNI++ SLC  G  E A ++  ++  
Sbjct: 129 NVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDS 188

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           +   P+++TY ILI +    G+ + A ++LDEM                  +CK+G +  
Sbjct: 189 EERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDL 248

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             + +  +    C P+  ++N  +  L   G+  E   ++  + ++        Y  +I+
Sbjct: 249 VIKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVIT 307

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           SLCR G T  A  +L    + G  PD Y+Y  LI   C +G LD A+E    +  +   P
Sbjct: 308 SLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRP 367

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            + N+N ++  FCK+G  D +L+I E + + G  PN ++Y  +   +    +K  A  ++
Sbjct: 368 ILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVL 427

Query: 393 SEMLSKGI 400
            E+L + +
Sbjct: 428 KELLLRQV 435



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 40/238 (16%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPD-------VVMCTKLIKKFFQ 84
           SF    T +  +I    + GK D  +  ++ M+ + C P+        V+C         
Sbjct: 225 SFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLC--------- 275

Query: 85  ERKSNKAVRVMEILEKYGEPDVFA----YNALISGFCKANQIELANKVLDRLRSRGFSPD 140
             K  +      I++  G     +    Y  +I+  C+      A ++L  +   GF PD
Sbjct: 276 --KQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPD 333

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
             TY+ +I  LC  GM++ A ++F  L  ++ +P +  +  LI                 
Sbjct: 334 PYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALI----------------- 376

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
            +G CK G    +   +  +  +G  P+  +Y +++  + +  + E   +++ E++ R
Sbjct: 377 -LGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLR 433


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/525 (33%), Positives = 285/525 (54%), Gaps = 51/525 (9%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCT 76
           V SS+    NT L +F+  E   + ++    + G+ DE+  F+E M   G   P V+ CT
Sbjct: 98  VESSSANGVNTSL-NFEESEIHHLHVL---IKNGELDEASRFLEYMTNKGNIMPCVIACT 153

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYN---------ALISGFCKANQIELAN 126
            LI +F +  ++  A R+M ILE+ G   D+  YN          LI G+C + ++E A 
Sbjct: 154 ALISEFCKIGRTKNATRIMGILEESGAVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEAL 213

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +VLD +     SP+ + Y+ ++ SLC R  ++   +V D+ L+  C P V+TYT LI A 
Sbjct: 214 RVLDCM---SVSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAA 270

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
             + +  +AMKLL EM                 G+C +G + +  +F+++L S G QPDV
Sbjct: 271 CKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDV 330

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ISY ++L +L + G+W +  KL+  M+ +G   NVVT++ LI+ LC+ G    A +VL  
Sbjct: 331 ISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEM 390

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             +   TP++ SY+P I  +C +        +L+ M+S GC PDIV YN +LAA CK+  
Sbjct: 391 IXKHVCTPNSISYNPSIGGFCNEKS-----XYLEIMVSRGCYPDIVTYNILLAALCKDRK 445

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A+EI ++LS  G  P+V +Y+ +   L   G    AL ++ E  +KG++P+ IT+ S
Sbjct: 446 VDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTS 505

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++  + R G V EA+ +   +E    RP   +YN+II+G CKT++ +           +G
Sbjct: 506 VVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQTS-----------RG 554

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           CKP E TY +L++GI   G   EA +L + L S   + +   +++
Sbjct: 555 CKPTEATYNILVKGITSEGXPKEASKLWSELYSKGPVKKSLVEKI 599


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 259/474 (54%), Gaps = 28/474 (5%)

Query: 45  KRSFRA----GKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           KR  R+    G+ DE+L   +SM + G +  P VV C  LIK+   + + + A RV   L
Sbjct: 154 KRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL 213

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                  V  YN +++G+C+A +IE A ++++ +    F PD  T+N +I +LC RG I 
Sbjct: 214 GPSAT--VVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIP 268

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VFD +L   C P+V+TY+IL+ AT  E    +AM LLDEM                
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             MC +G V +A   + +L S GC+PD ++Y  +L++L    +W+E E+L+ EM S    
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ VT++ +++SLC+ G  + A++V+    E G   D  +Y  ++   C  GR+D A+E 
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  + S GC PD + Y T+L   C     ++A E+  ++    CPP+  ++NT+ ++L  
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G   RA+ ++ +M   G  PD +TYN +I  LC +  +D+A+ LL D++S   +P +++
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +N ++ G C   R  ++ +++A M    C P+E T+  +I  +   G   +A+E
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIE 622



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 167/593 (28%), Positives = 275/593 (46%), Gaps = 86/593 (14%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           S  V   N   N   R     + R   + + F      F  LI+     G+  ++L   +
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFD 275

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            M+  GC P VV  + L+    +E    +A+ +++ +   G EPD+  YN LI+  C   
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
            ++ A  +L  L S G  PD VTY  ++ SLC     +   ++  ++  +NC P  +T+ 
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            ++ +   +G  D+A++++D M                 G+C  G V  A + +  L+S 
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC+PD I+Y  +L+ L +  +WE  E+LM EM+     P+ VT++ +++SLC+ G  + A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL-- 341
           + V+    E G +PD  +Y+ +I   C +  +D A+E L  + S GC PDIV +NT+L  
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575

Query: 342 ---------------------------------AAFCKNGNADQALEIFEKLSDVGCPPN 368
                                             + C+ G   QA+E  + +++ GC PN
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635

Query: 369 VSSY---------------------------------NTMFSALWSSGDKIRALGMISEM 395
            S+Y                                 NT+ S L  +G    AL ++  M
Sbjct: 636 SSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVM 695

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G+ PD  TY SL   +CR+   D AV +L  ++ T   P    YN ++LGFC+ RR 
Sbjct: 696 VSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRT 755

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           + +I+  A M   GC P+E+TYV+L+E + YGG   EA  L  +L S+  + +
Sbjct: 756 DLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDK 808


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 138/353 (39%), Positives = 216/353 (61%), Gaps = 18/353 (5%)

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            K+ D++    C P +ITY +++                   G+C++G V  A +F+ +L
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLN------------------GICQEGRVDDAMEFLENL 42

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S G +P+ +SYN++L+ L    +WE+ EKLM EM  +G  PNVVT+++LIS LCR G  
Sbjct: 43  PSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLV 102

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E A++VL    + G TP++ SY+PL+ A+CK  ++D A+ F++ M+S GC PDIV+YNT+
Sbjct: 103 EPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTL 162

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L A C+NG  D A+++  +L   GC P + SYNT+   L  +G    AL ++ EM+SKG+
Sbjct: 163 LTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGL 222

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +PD ITY ++ S LCR+  ++EA+     ++    RPTV+ YN I+LG CK R  + +I+
Sbjct: 223 QPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAID 282

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           + + M   GC PNE+TY +L+EG+ Y G   EA +L   L S   +++   K+
Sbjct: 283 LFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKK 335



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 172/318 (54%), Gaps = 17/318 (5%)

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           K+LD +R +G +PD++TYN+++  +C  G ++ A +  + L     +P  ++Y I+++  
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 187 MLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDV 229
               + + A KL++EM                  +C++G+V  A + +  +   GC P+ 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SYN LL       K ++    +  M+SRG  P++V+Y+ L+++LCR+G+ + A+D+L  
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K KG +P   SY+ +I    K G+   A+E LD MIS G  PDI+ Y TI +  C+   
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A+  F K+ D+G  P V  YN +   L    +   A+ + S M+S G  P+E TY  
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 410 LISCLCRDGMVDEAVGLL 427
           L+  L  +G+V EA  LL
Sbjct: 302 LVEGLAYEGLVKEARDLL 319



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 172/324 (53%), Gaps = 18/324 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            ++ M   GC PD++    ++    QE + + A+  +E L  YG EP+  +YN ++ G  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
            A + E A K+++ +  +G  P+VVT+N++I  LC RG++E A +V +Q+ +  C P  +
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           +Y  L+ A   + + DKAM  ++ M                  +C+ G V  A   +  L
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           + +GC P +ISYN ++  L   GK +E  +L+ EMIS+GL+P+++TY+ + S LCR+ K 
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+A+      ++ G+ P    Y+ ++   CK      AI+   YMIS+GC+P+   Y  +
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302

Query: 341 LAAFCKNGNADQALEIFEKLSDVG 364
           +      G   +A ++  +L   G
Sbjct: 303 VEGLAYEGLVKEARDLLGQLCSRG 326



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 19/314 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E   N      +     +  ++K  F A +++++   +E M   GC P+VV   
Sbjct: 31  RVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 90

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    +      A+ V+E + KYG  P+  +YN L+  FCK  +++ A   ++ + SR
Sbjct: 91  MLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSR 150

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PD+V+YN ++ +LC  G ++ A  +  QL    C P +I+Y  +I      G+T +A
Sbjct: 151 GCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEA 210

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++LLDEM                   S+G QPD+I+Y  +   L    K EE  +   ++
Sbjct: 211 LELLDEM------------------ISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ P VV Y+ ++  LC+  +T +A+D+       G  P+  +Y  L+     +G +
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLV 312

Query: 316 DLAIEFLDYMISDG 329
             A + L  + S G
Sbjct: 313 KEARDLLGQLCSRG 326



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 17/130 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AGK  E+L  ++ M++ G +PD++  T +     +E K  +A+R    ++  G  P V 
Sbjct: 203 KAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVV 262

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI----------------GSL 151
            YNA++ G CK  +   A  +   + S G  P+  TY I++                G L
Sbjct: 263 LYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322

Query: 152 CSRGMIESAF 161
           CSRG++   F
Sbjct: 323 CSRGVVNKKF 332


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/518 (32%), Positives = 261/518 (50%), Gaps = 54/518 (10%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R        E+   +E   + G  PDV +CTKLI+   +  +++ A RV+   E  G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 104 P-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           P DVFAYN L++G+C+  +++ A ++   + S    PD  TY  +I  LC RG +  A  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           + D +LR  C+P+V+TYT+L++A        +AMK+LDEM                 GMC
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++  V  A Q +  L S G QPD +SY  +L+ L    +WE+ E L  EM+     PN V
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+ +L+   CR G  E A++VL    E G T +    + +I++ CK GR+D A EFL+ M
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            S GC PD ++Y T+L   C+ G  + A E+  ++    CPPN  ++NT    L   G  
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 386 IRALGMISEMLSKG--------------------------------IEPDEITYNSLISC 413
            +A+ +I +M   G                                 EP+ ITY +L++ 
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTG 458

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC    +D A  LL +M        V+++N+++  FC+   + E+IE++  M E GC PN
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             T+  L++GI       EA+EL + LVS   IS DT 
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVS-KGISLDTI 555



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 272/519 (52%), Gaps = 50/519 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+     G+  ++L  ++ M+   C+P VV  T L++   +     +A++V++ + 
Sbjct: 140 YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +I+G C+ ++++ A ++L+RL S GF PD V+Y  ++  LC+    E
Sbjct: 200 AKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 259

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
               +F +++ +NC P  +T+ +L++     G  ++A+++LD M                
Sbjct: 260 DVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVI 319

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G V  AF+F+ ++ S GC PD ISY  +L+ L   G+WE+ ++L+ EM+ +   
Sbjct: 320 NSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCP 379

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR------- 314
           PN VT++  I  LC+ G  + A+ ++    E G +    +Y+ L++ +C  GR       
Sbjct: 380 PNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALEL 439

Query: 315 -------------------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                    LD A E L  M+ + C  ++V +N +++ FC+ G 
Sbjct: 440 FNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A+E+ +++ + GC PN+ ++NT+   +    +   AL ++  ++SKGI  D ITY+S
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++  L R+  ++EAV +   ++    RP  + YN I+   CK    + +I+  A M    
Sbjct: 560 IVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS 619

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           C PNE+TYV+LIEG+   G   EA  + + L S   +S+
Sbjct: 620 CMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSK 658


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 276/520 (53%), Gaps = 50/520 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+     G+  ++L  ++ M+  GC+P+VV  T L++   +     +A+ V++ + 
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +I+G C+  +++ A ++L+RL S GF PD V+Y  ++  LC+    +
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++F +++  NC P  +T+ +LI+     G  ++A+++L++M                
Sbjct: 266 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G V  AF+ +  + S GC PD ISY  +L+ L    +W++ ++L+ EM+     
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCP 385

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG-------- 313
           PN VT++  I  LC+ G  E A+ ++    E G T    +Y+ L++ +C  G        
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL 445

Query: 314 ------------------------RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                   RLD A E +  M+   C P++V +N +++ FC+ G 
Sbjct: 446 FRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGF 505

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A+E+ E++ + GC PN+ +YNT+   +        AL ++  ++SKG+ PD IT++S
Sbjct: 506 LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 565

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  L ++  ++EAV L   ++    RP  + YN I+LG CK   I+ +I+  A M   G
Sbjct: 566 IIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNG 625

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           C PNE+TY++LIEG+ + G   EA +L + L S   ++++
Sbjct: 626 CMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKN 665



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 265/512 (51%), Gaps = 31/512 (6%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE-SMVANG 67
           NPK  + +   ++A TRP +   + +       +LI R   AG    ++  +E S   +G
Sbjct: 18  NPKP-QHLAAPAAATTRPESPN-APNPASAHLRRLIAREDLAG----AVRLVERSGSCDG 71

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELAN 126
             PDV +CTKLI+   +  +++ A RV+   E  G P DVFAYN L++G+C+   ++ A 
Sbjct: 72  EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR 131

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +++    S   +PD  TY  +I  LC RG +  A  + D +LR  C+P V+TYT+L++A 
Sbjct: 132 RLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 188

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
                 ++AM +LDEM                 GMC++G V  A + +  L S G QPD 
Sbjct: 189 CRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT 248

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY  LL+ L    +W++ E+L  EM+ +   PN VT+ +LI   CR G  E A+ VL  
Sbjct: 249 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E G   +    + +I++ CK GR+D A + L+ M S GC PD ++Y T+L   C+   
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A E+  ++    CPPN  ++NT    L   G   +A+ +I +M   G     +TYN+
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L++  C  G +D A+ L   M     +P  I+Y  ++ G C   R++ + E++A M    
Sbjct: 429 LVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           C PN  T+ +L+      G+  EA+EL   ++
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 187/380 (49%), Gaps = 15/380 (3%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F  LI+   R G  + ++  +E M  +GC  +  +C  +I    ++ + + A +++
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
             +  YG  PD  +Y  ++ G C+A + + A ++L+ +      P+ VT+N  I  LC +
Sbjct: 342 NDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQK 401

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G+IE A  + +Q+    C   V+TY  L+    ++G  D A++L   M            
Sbjct: 402 GLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTL 461

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C    +  A + V  +    C P+V+++N+L+      G  EE  +L+ +M+  G 
Sbjct: 462 LTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGC 521

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN++TY+ L+  + +D  +EDA+++L     KG++PD  ++  +I    K+ R++ A++
Sbjct: 522 TPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQ 581

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               +   G  P  V YN IL   CK    D A++ F  +   GC PN S+Y  +   L 
Sbjct: 582 LFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLA 641

Query: 381 SSGDKIRALGMISEMLSKGI 400
             G    A  ++S + S+G+
Sbjct: 642 HEGLLKEAQDLLSVLCSRGV 661



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 3/297 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++ + G      RS    G  PDV     L+R L   G+  +  +++      G   +V 
Sbjct: 53  REDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 112

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ L++  CR G  + A    R      + PDAY+Y PLI   C  GR+  A+  LD M
Sbjct: 113 AYNTLVAGYCRYGHLDAA---RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  GC P++V Y  +L A C+N   +QA+ + +++   GC PN+ +YN + + +   G  
Sbjct: 170 LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +++ + S G +PD ++Y +L+  LC     D+   L  +M      P  ++++++
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I  FC+   +  +I+VL  M E GC  N T   ++I  I   G   +A +L N + S
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 162/481 (33%), Positives = 261/481 (54%), Gaps = 20/481 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + G+ DE+    + M+A G  P+V+    L+    +  K  +A  ++E ++
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PDV  Y+ L+  FCKA++++ A ++L  + SRG +P+VVT+N +I  LC      
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 159 SAFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GM 204
            AF++FD + L+    P  ITY  LI      G+  +A  LLD M             G+
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G V +A Q    +      PD +++N+L+      G +E+   L  EM+++ L+P+V
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +T+  LI  LC+ G+ E A D+L      G+ P+  +Y+ L+   CK GR++ A +FL+ 
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S GC+PD + Y +++ A C+    D AL++  +L   G  P+  +YN +   LW SG 
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR---PTVIS 441
             +A+ ++ EM+ KG  PD +TYN+LI  LC+ G ++EA  L  DM S   R   P V++
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCK--PNETTYVLLIEGIGYGGWRAEAMELANA 499
           Y+++I G CK  RI+E+ E++  M  K C   PN  TY   ++G+      AEA EL  +
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 500 L 500
           L
Sbjct: 843 L 843



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 231/431 (53%), Gaps = 27/431 (6%)

Query: 96   EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            E++ K  +PDV  + ALI G CKA Q+E A  +LD + + G  P+VVTYN ++  LC  G
Sbjct: 592  EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651

Query: 156  MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             IE A +  ++++   C P  ITY  L+ A     +TD A++L+ E+             
Sbjct: 652  RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711

Query: 203  ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM--- 255
                G+ K G   QA   +  +  +G  PDV++YN L+ +L   G  EE  +L  +M   
Sbjct: 712  ILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771

Query: 256  ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDG 313
            +SR   PNVVTYS+LI+ LC+ G+ ++A ++++    K   + P+  +Y+  +   CK  
Sbjct: 772  VSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS 831

Query: 314  RLDLAIEFLDYMISDGCL---PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             +  A E +   + DG L   PD V ++T++   CK G  D+A  +F+ +   G  PNV 
Sbjct: 832  MMAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV 890

Query: 371  SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            +YN + + L  +    RA  MI  M+ KG+ PD ITY+ L+   C+   VDEA+ LL  M
Sbjct: 891  TYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950

Query: 431  ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGW 489
             S    P V+++N II G CK+ +  E+ ++   M  + G  P++ TY  LI+G+   GW
Sbjct: 951  ASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGW 1010

Query: 490  RAEAMELANAL 500
              +A  L +A+
Sbjct: 1011 AGQAEVLLDAM 1021



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 255/475 (53%), Gaps = 33/475 (6%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  L+    ++G+ +E+  F+E MV++GC PD +    L+    +  +++ A++++  L+
Sbjct: 640  YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             +G +PD   YN L+ G  K+ Q E A  VL+ +  +G  PDVVTYN +I SLC  G +E
Sbjct: 700  SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759

Query: 159  SAFKVFDQL---LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             A ++   +   +   C P V+TY++LI      G+ D+A +L+ EM             
Sbjct: 760  EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 203  ------GMCKKGMVGQAFQFVRSLE--SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                  G+CK+ M+ +A + +RSL   S    PD ++++ L+  L   G+ +E   +  +
Sbjct: 820  YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 255  MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
            MI+ G  PNVVTY++L++ LC+  K E A  ++ +  +KG+TPD  +Y  L+ A+CK   
Sbjct: 880  MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 315  LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYN 373
            +D A+E L  M S GC P++V +N+I+   CK+  + +A ++F+ ++   G  P+  +Y 
Sbjct: 940  VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999

Query: 374  TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            T+   L+ +G      G    +L    +PD   +N  I+ L + G V  A+  ++++E  
Sbjct: 1000 TLIDGLFRTG----WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE-- 1053

Query: 434  RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
               P  +++NI+I G CK     ++  +   M  K  +P+  T+  LI+G+   G
Sbjct: 1054 -LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 241/492 (48%), Gaps = 56/492 (11%)

Query: 49  RAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           RAG+   +L  F   M  +G  P +V    +I    +  +    + + E ++E+   PDV
Sbjct: 192 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDV 251

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN LI   CKA  +E A ++   + SR   P+VVTY+++I  LC  G I+ A ++  +
Sbjct: 252 VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311

Query: 167 LLRDNCK--PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE--S 222
           + R +C   P +ITY   +                   G+CK+ M  +A + +RSL   S
Sbjct: 312 MTRKSCDVLPNIITYNSFLD------------------GLCKQSMTAEACELMRSLRDGS 353

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
               PD ++++ L+  L   G+ +E   +  +MI+ G  PNV+TY+ L++ LC+  K E 
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  ++ +  +KG+TPD  +Y  L+ A+CK  R+D A+E L  M S GC P++V +N+I+ 
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473

Query: 343 AFCKNGNADQALEIF--------------------------------EKLSDVGCPPNVS 370
             CK+  + +A ++F                                E L D    P+  
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY 533

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N   + L   GD  RAL + + ML   + PD++T+N LI+  C+ G  ++A  L  +M
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
            +   +P V+++  +I G CK  ++  + ++L  M   G  PN  TY  L+ G+   G  
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653

Query: 491 AEAMELANALVS 502
            EA +    +VS
Sbjct: 654 EEACQFLEEMVS 665



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 231/465 (49%), Gaps = 28/465 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           LI    + G+ DE+   I+ M    C   P+++     +    ++  + +A  +M  L  
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 101 YG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 PD   ++ LI G CK  QI+ A  V D + + G+ P+V+TYN ++  LC    +
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A  + + ++     P VITY++L+ A                   CK   V +A + +
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDA------------------FCKASRVDEALELL 453

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVTYSILISSLCR 276
             + SRGC P+V+++N ++  L    +  E  ++  +M +  GL P+ +TY  LI  L R
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFR 513

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+   A  +L A  +    PD Y+++  I+   K G +  A++  + M+    +PD V 
Sbjct: 514 TGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++A  CK GN +QA  +FE++      P+V ++  +   L  +G    A  ++  M 
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G+ P+ +TYN+L+  LC+ G ++EA   L +M S+   P  I+Y  ++   C+  R +
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +++++++ +   G  P+  TY +L++G+   G   +A+ +   +V
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 133/411 (32%), Positives = 205/411 (49%), Gaps = 41/411 (9%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGF-------SPDVVTYNIMIGSLCSRGM 156
           P+ F Y+ L+    KA          D  R+ GF       S  V  YNI++ SLC  G 
Sbjct: 144 PNHFTYSTLLRATYKAGG--------DVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGE 195

Query: 157 IESAFKVF-DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
              A ++F  ++ RD   PT++TY  +I                   G+CK   +G   +
Sbjct: 196 TARALEIFRGEMARDGVAPTIVTYNTIIN------------------GLCKSNELGAGME 237

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               L  RG  PDV++YN L+ +L   G  EE  +L  +M SR   PNVVTYS+LI+ LC
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLC 297

Query: 276 RDGKTEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-- 331
           + G+ ++A ++++    K   + P+  +Y+  +   CK      A E +   + DG L  
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRV 356

Query: 332 -PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V ++T++   CK G  D+A  +F+ +   G  PNV +YN + + L  +    RA  
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           MI  M+ KG+ PD ITY+ L+   C+   VDEA+ LL  M S    P V+++N II G C
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476

Query: 451 KTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           K+ R  E+ ++   M  + G  P++ TY  LI+G+   G   +A  L +A+
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 190/395 (48%), Gaps = 21/395 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM-LEGQTDK 194
           GF   + ++N  +  L   G    A  +F   L   C+P   TY+ L++AT    G  ++
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 195 AMKLLDE---------------MGMCKKGMVGQAFQFVRSLESR-GCQPDVISYNMLLRT 238
            +                      +C+ G   +A +  R   +R G  P +++YN ++  
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +   G +L  E++ RG  P+VVTY+ LI SLC+ G  E+A  +      +   P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGC--LPDIVNYNTILAAFCKNGNADQALEI 356
             +Y  LI+  CK GR+D A E +  M    C  LP+I+ YN+ L   CK     +A E+
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 357 FEKLSD--VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
              L D  +   P+  +++T+   L   G    A  +  +M++ G  P+ ITYN+L++ L
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+   ++ A  ++  M      P VI+Y++++  FCK  R++E++E+L  M  +GC PN 
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            T+  +I+G+       EA ++ + +   H +  D
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 18/263 (6%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
            F  LI    + G+ DE+    + M+A G  P+VV    L+    +  K  +A  ++E ++
Sbjct: 857  FSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV 916

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +K   PDV  Y+ L+  FCKA+ ++ A ++L  + SRG +P+VVT+N +I  LC      
Sbjct: 917  DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSG 976

Query: 159  SAFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GM 204
             AF++FD + L+    P  ITY  LI      G   +A  LLD M             G+
Sbjct: 977  EAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGL 1036

Query: 205  CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
             K G V +A   +  LE     PD +++N+L+      G +E+   L  EM+++ L+P+V
Sbjct: 1037 SKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 1093

Query: 265  VTYSILISSLCRDGKTEDAVDVL 287
            +T+  LI  LC+ G+ E   D++
Sbjct: 1094 MTFGALIDGLCKAGQVEATWDIM 1116



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 37/249 (14%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV------------- 335
           AA   G     +S++  ++   K G    AI+     +   C P+               
Sbjct: 101 AAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG 160

Query: 336 ---------------------NYNTILAAFCKNGNADQALEIFE-KLSDVGCPPNVSSYN 373
                                +YN +L + C+ G   +ALEIF  +++  G  P + +YN
Sbjct: 161 GDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYN 220

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ + L  S +    + +  E++ +G  PD +TYN+LI  LC+ G ++EA  L  DM S 
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK--PNETTYVLLIEGIGYGGWRA 491
              P V++Y+++I G CK  RI+E+ E++  M  K C   PN  TY   ++G+      A
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 340

Query: 492 EAMELANAL 500
           EA EL  +L
Sbjct: 341 EACELMRSL 349


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/476 (32%), Positives = 252/476 (52%), Gaps = 24/476 (5%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R        E+   +E+  + G  PDV +CTKLI+   +  +++ A RV+   E  G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 104 P-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           P DVFAYN L++G+C+  +++ A ++   + S    PD  TY  +I  LC RG +  A  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           + D +L+  C+P+V+TYT+L++A        +AM +LDEM                 GMC
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G V  A + +  L S G QPD++SY  +L+ L    +W++ + L  EM+ +   PN V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+ +L+   CR G  E A+ VL+   + G TP+    + +I+A CK GR+D A +FL+ M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC PD ++Y T+L   C+ G  + A E+  ++    CPPN  ++NT    L   G  
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A+ +I  M   G     +TYN+L+   C  G VD A+ L  ++      P  I+Y  +
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTL 459

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + G C   R++ + E+LA M +K C  N  T+ +L+      G+  EAMEL N ++
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 262/508 (51%), Gaps = 50/508 (9%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  ++L  ++ M+  GC+P VV  T L++   +     +A+ V++ +   G  P++  Y
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY 214

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I+G C+  +++ A ++L+RL S GF PD+V+Y  ++  LC+    +    +F +++ 
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +T+ +L++     G  ++A+++L +M                  +CK+G V  
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A+ F+ ++   GC PD ISY  +LR L   G+WE  ++L+ EM+ +   PN VT++  I 
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR------------------ 314
            LC+ G  E A+ ++    E G +    +Y+ L+  +C  GR                  
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI 454

Query: 315 --------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
                         LD A E L  MI   C  + V +N +++ FC+ G  ++A+E+  ++
Sbjct: 455 TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + GC PN+ ++NT+   +    +   AL ++  ++SKG+  D ITY+S++  L R+   
Sbjct: 515 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 574

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA+ +L  ++    RP V  YN I+   CK    +++I+  A M   GC PNE+TY++L
Sbjct: 575 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 634

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISR 508
           IEG+ + G   EA  + + L +   +S+
Sbjct: 635 IEGLAHEGLLKEARYVLSELYAKGVLSK 662



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 145/275 (52%), Gaps = 4/275 (1%)

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           LR L+      E  +L+    SRG  P+V   + LI +LCR G+T DA  VLR A+  G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             D ++Y+ L++ YC+ GRLD A   +  M      PD   Y  I+   C  G    AL 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALA 162

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + + +   GC P+V +Y  +  A+  S     A+ ++ EM +KG  P+ +TYN +I+ +C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R+G VD+A  +L  + S  F+P ++SY  ++ G C  RR ++   + A M +K C PNE 
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           T+ +L+     GG    A+++   + S H  + +T
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQM-SQHGCTPNT 316



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 152/302 (50%), Gaps = 4/302 (1%)

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V +  SRG  PDV     L+R L   G+  +  +++    + G   +V  Y+ 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++  CR G+ + A    R      + PDAY+Y P+I   C  GR+  A+  LD M+  G
Sbjct: 115 LVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C P +V Y  +L A CK+    +A+ + +++   GC PN+ +YN + + +   G    A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +++ + S G +PD ++Y +++  LC     D+   L  +M   +  P  +++++++  F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           C+   +  +I+VL  M + GC PN T   ++I  I   G   +A +  N +  M+  + D
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM-GMYGCNPD 350

Query: 510 TF 511
           T 
Sbjct: 351 TI 352



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 172/349 (49%), Gaps = 22/349 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + +   N  +   +     +  +++   RAG+++ +   +  MV   C P+ V   
Sbjct: 331 RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             I    Q+    +A++++E++ +YG    +  YNAL+ GFC   +++ A ++ + L   
Sbjct: 391 TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC- 449

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              P+ +TY  ++  LC    +++A ++   +++ +C    +T+ +L+            
Sbjct: 450 --EPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSF---------- 497

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                    C+KG V +A + V  +   GC P++I++N LL  +      EE  +L+  +
Sbjct: 498 --------FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGL 549

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +S+G+  + +TYS ++  L R+ +TE+A+ +L A ++ G+ P    Y+ ++ A CK    
Sbjct: 550 VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCET 609

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           D AI+F  YM+S+GC+P+   Y  ++      G   +A  +  +L   G
Sbjct: 610 DQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  291 bits (744), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 170/506 (33%), Positives = 268/506 (52%), Gaps = 21/506 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F +   +  KL ++S +  + +++ + +E MV  G KPDV   T+L+    +  K  KA+
Sbjct: 59  FTLPNWKIGKLDQKS-KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAI 117

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +VME++   G  PD  +Y  L+S  C+   +  A +++D++   G+  +  TYN ++  L
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  + ++ D+L++    P   TY+ L++A   E   D+A KLLDE+         
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNL 237

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK+G    A Q  R L S+G  P+V+SYN+LLR+L N G+WEE   L+ E
Sbjct: 238 VSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAE 297

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M      P+ VTY+ILI SL   G+TE A++VL         P A SY+P+I+  CKD +
Sbjct: 298 MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRK 357

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +DL ++ LD M+   C P+   YN I A  C+ G   +A  I + L +         Y  
Sbjct: 358 VDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKI 416

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + ++L   G+   A  ++ EM   G  PD  TY+SLI  LC +GM++EA+ +   ME   
Sbjct: 417 VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN- 475

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +    +YN +ILG CK+RR + +++V   M  KG   NETTY +L+EGI +      A 
Sbjct: 476 IKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLAT 535

Query: 495 ELANALVSMHAISRDTFKRLNRTFPL 520
           E+   L     I++ T +RL   + L
Sbjct: 536 EVLRELQLRDVINQSTVERLVMQYDL 561


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 169/500 (33%), Positives = 266/500 (53%), Gaps = 21/500 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F +   +  KL ++S +  + +++ + +E MV  G KPDV   T+L+    +  K  KA+
Sbjct: 59  FTLPNWKIGKLDQKS-KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAI 117

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +VME++   G  PD  +Y  L+S  C+   +  A +++D++   G+  +  TYN ++  L
Sbjct: 118 KVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGL 177

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  + ++ D+L++    P   TY+ L++A   E   D+A KLLDE+         
Sbjct: 178 CMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNL 237

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK+G    A Q  R L S+G  P+V+SYN+LLR+L N G+WEE   L+ E
Sbjct: 238 VSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAE 297

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M      P+ VTY+ILI SL   G+TE A++VL         P A SY+P+I+  CKD +
Sbjct: 298 MDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRK 357

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +DL ++ LD M+   C P+   YN I A  C+ G   +A  I + L +         Y  
Sbjct: 358 VDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKI 416

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + ++L   G+   A  ++ EM   G  PD  TY+SLI  LC +GM++EA+ +   ME   
Sbjct: 417 VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN- 475

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +    +YN +ILG CK+RR + +++V   M  KG   NETTY +L+EGI +      A 
Sbjct: 476 IKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLAT 535

Query: 495 ELANALVSMHAISRDTFKRL 514
           E+   L     I++ T +RL
Sbjct: 536 EVLRELQLRDVINQSTVERL 555


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/450 (33%), Positives = 253/450 (56%), Gaps = 21/450 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D  L+F E  ++  C PD V    +I    +  + + A+R++E +   G  P+VF+YN +
Sbjct: 28  DAVLHFRE--MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTV 85

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + GFCKAN++E A  +L+++  RG  PDVV+Y  +I  LC    ++ A +V D++++  C
Sbjct: 86  LHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 145

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P VITY  L+      G  D A++L+ +M                 G+C    +  A Q
Sbjct: 146 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQ 205

Query: 216 FVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             + +E  G C PDV +Y+ ++ +L+  GK ++  +L+  M+S+G  PNVVTYS L+  L
Sbjct: 206 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGL 265

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ GK ++A  +L+     G +P+  +Y+ +I  +CK GR+D A   L+ M+  GC P++
Sbjct: 266 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 325

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V Y  +L AFCK G A+ A+ + E + + G  PN+ +YN++        +  RA  ++S 
Sbjct: 326 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 385

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ KG  P+ ++YN++I+ LC+   V E V LL  M S    P ++++N II   CKT R
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++ + E+   + E GC PN  TY  L+ G+
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGL 475



 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 270/509 (53%), Gaps = 55/509 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +A + + +L+ +E MV  GC PDVV  T +I    +  + ++A RVM+ ++++  +P+V 
Sbjct: 91  KANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 150

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L+ GFC+   ++ A +++ ++  RG+ P+ +TYN ++  LCS   ++SA ++F ++
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
               +C P V TY+ ++ + +  G+ D A +L++ M                 G+CK G 
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK 270

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   ++ +   GC P++++YN ++     +G+ +E   L+ EM+  G +PNVVTY++
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+ + C+ GK EDA+ ++    EKG  P+ ++Y+ L+  +CK   ++ A + L  MI  G
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390

Query: 330 CLPDIVNYNTILA-----------------------------------AFCKNGNADQAL 354
           C+P++V+YNT++A                                   A CK    D A 
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEITYNSLISC 413
           E+F  + + GC PN+ +YN++   L  S    +A  ++ EM  K G  PD ITYN++I  
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+   VD A  L + M S    P  ++Y+I+I   CK R ++E+  VL  M + G  P 
Sbjct: 511 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPG 570

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVS 502
             TY  LI+G    G   +A+E+   L+S
Sbjct: 571 AITYGTLIDGFCKTGNLDKALEILQLLLS 599



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 225/440 (51%), Gaps = 18/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           M   G K    +   +++      + + AV     + K   PD   YN +I+G  K++++
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A ++L+ +   GF+P+V +YN ++   C    +E+A  + +Q++   C P V++YT +
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I       Q D+A +++D+M                 G C+ G +  A + VR +  RG 
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAV 284
           +P+ I+YN ++  L +  K +   +L  EM   G   P+V TYS ++ SL + GK +DA 
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            ++ A   KG +P+  +Y  L+   CK G+LD A   L  M   GC P+IV YNTI+   
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G  D+A  + E++ D GC PNV +Y  +  A    G    A+G++  M+ KG  P+ 
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TYNSL+   C+   V+ A  LL  M      P V+SYN +I G CK  +++E + +L  
Sbjct: 361 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 420

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M    C P+  T+  +I+ +
Sbjct: 421 MLSNNCVPDIVTFNTIIDAM 440



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 247/487 (50%), Gaps = 59/487 (12%)

Query: 52  KFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           K D +L   + M  +G C PDV   + ++    +  K + A R++E +   G  P+V  Y
Sbjct: 199 KLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTY 258

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           ++L+ G CKA +++ A  +L R+   G SP++VTYN +I   C  G I+ A+ + ++++ 
Sbjct: 259 SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C+P V+TYT+L+ A    G+ + A+ L++ M                   CKK  V +
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q + S+  +GC P+V+SYN ++  L    K  EG  L+ +M+S    P++VT++ +I 
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCL 331
           ++C+  + + A ++    +E G TP+  +Y+ L+   CK  R D A   L  M    GC 
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKIRAL 389
           PDI+ YNT++   CK+   D+A ++F ++   G  P+  +Y+ + S+L  W   D+  A 
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE--AN 556

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL------------------VDME 431
            ++  ML  G +P  ITY +LI   C+ G +D+A+ +L                  +D  
Sbjct: 557 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 616

Query: 432 STRFR-----------------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           S R R                 P  ++YN ++ GFC   R  +++++   M + GC+P+ 
Sbjct: 617 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDN 676

Query: 475 TTYVLLI 481
            TY  L+
Sbjct: 677 ATYTTLV 683



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 32/440 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  +I    + G+ DE+ + +E MV  GC+P+VV  T L+  F +  K+  A+ ++E++ 
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK   P++F YN+L+  FCK +++E A ++L  +  +G  P+VV+YN +I  LC    + 
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
               + +Q+L +NC P ++T+  +I A     + D A +L + +                
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 203 -GMCKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            G+CK     QA   +R +   +GC PD+I+YN ++  L    + +   KL  +M+S GL
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ VTYSI+ISSLC+    ++A +VL    + G  P A +Y  LI  +CK G LD A+E
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  ++S G  PD+V ++  +    K G   QA E+ E +   G  P+  +YNT+     
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     A+ +   M   G EPD  TY +L             VG LVD +S +     +
Sbjct: 653 DASRTEDAVDLFEVMRQCGCEPDNATYTTL-------------VGHLVDKKSYKDLLAEV 699

Query: 441 SYNIIILGFCKTRRINESIE 460
           S +++  GF     ++  +E
Sbjct: 700 SKSMVDTGFKLNHELSSKLE 719



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 189/371 (50%), Gaps = 20/371 (5%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           +  +G       +  ++  LC  G    A   F ++ +  C P  +TY  +I       +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDR 59

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
            D A++LL+EM                     G  P+V SYN +L       + E    L
Sbjct: 60  LDDAIRLLEEM------------------VDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
           + +M+ RG  P+VV+Y+ +I+ LC+  + ++A  V+    ++G  P+  +Y  L+  +C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVS 370
            G LD A+E +  M   G  P+ + YN I+   C     D AL++F+++ + G CPP+V 
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+T+  +L  SG    A  ++  M+SKG  P+ +TY+SL+  LC+ G +DEA  LL  M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
             +   P +++YN II G CK  RI+E+  +L  M + GC+PN  TY +L++     G  
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 491 AEAMELANALV 501
            +A+ L   +V
Sbjct: 342 EDAIGLVEVMV 352



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 1/219 (0%)

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL   A  +  ++   C  G+   A+     M S  C PD V YNT++    K+   D 
Sbjct: 4   KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 62

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ + E++ D G  PNV SYNT+      +     AL ++ +M+ +G  PD ++Y ++I+
Sbjct: 63  AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+   VDEA  ++  M     +P VI+Y  ++ GFC+   ++ ++E++  M E+G +P
Sbjct: 123 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 182

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           N  TY  ++ G+  G     A++L   +    +   D F
Sbjct: 183 NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD     +  LI    + G  D++L  ++ +++ G  PDVV  +  I    +  +  +A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++E + + G  PD   YN L+ GFC A++ E A  + + +R  G  PD  TY  ++G L
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686

Query: 152 ------------CSRGMIESAFKVFDQL 167
                        S+ M+++ FK+  +L
Sbjct: 687 VDKKSYKDLLAEVSKSMVDTGFKLNHEL 714


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 272/529 (51%), Gaps = 50/529 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+     G+  E+L  ++ M+  GC+P VV  T L++   +     +A+ V++ + 
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +I+G C+  +++ A + L+RL S GF PD V+Y  ++  LC+    E
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
              ++F +++  NC P  +T+ +L++     G  ++A+++L++M                
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G V  AFQF+ ++ S GC PD ISY  +L+ L    +WE+ ++L+ EM+ +   
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR------- 314
           PN VT++  I  LC+ G  E A  ++    E G   +  +Y+ L++ +C  GR       
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 315 -------------------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                    LD A E L  M+   C P++V +N +++ FC+ G 
Sbjct: 448 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+E+ E++ + GC PN+ +YNT+   + +  +   AL ++  ++S G+ PD +TY+S
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  L R+  V+EA+ +   ++    RP  + YN I+L  CK    + +I+  A M   G
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           C PNE TY+ LIEG+    +  E  +L   L S   ++++  +     F
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 676



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 243/494 (49%), Gaps = 60/494 (12%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R        E+   ++   + G  PDV +CTKLI+   +  +++ A RV+   E+ G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 104 P-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             DVFAYN L++G+C+  Q++ A +++    S   +PD  TY  +I  LC RG +  A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D +L   C+P+V+TYT+L++A                  +CK    GQA + +  + +
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEA------------------VCKSTGFGQAMEVLDEMRA 208

Query: 223 RGCQPDVISYNMLLRTLLNMG-----------------------------------KWEE 247
           +GC P++++YN+++  +   G                                   +WE+
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            E+L  EM+ +   PN VT+ +L+   CR G  E A+ VL      G   +    + +I+
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK GR+D A +FL+ M S GC PD ++Y T+L   C+    + A E+ +++    CPP
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  ++NT    L   G   +A  +I +M   G E + +TYN+L++  C  G VD A+ L 
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M     +P  I+Y  ++ G C   R++ + E+LA M +K C PN  T+ +L+      
Sbjct: 449 YSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 488 GWRAEAMELANALV 501
           G   EA+EL   ++
Sbjct: 506 GLMDEAIELVEQMM 519



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 56/442 (12%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           NA +      + +  A +++DR  SRG +PDV     +I +LC RG    A +V     R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------GMCKKGMVGQAFQ 215
                 V  Y  L+      GQ D A +L+  M              G+C +G VG+A  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  RGCQP V++Y +LL  +     + +  +++ EM ++G  PN+VTY+++I+ +C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSY--------------------------------- 302
           R+G+ +DA + L      G  PD  SY                                 
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 303 --DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
             D L+  +C+ G ++ AI+ L+ M   GC  +    N ++   CK G  D A +    +
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              GC P+  SY T+   L  +     A  ++ EM+ K   P+E+T+N+ I  LC+ G++
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           ++A  L+  M        +++YN ++ GFC   R++ ++E+  +M    CKPN  TY  L
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTL 463

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           + G+      AE ++ A  L++
Sbjct: 464 LTGL----CNAERLDAAAELLA 481



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 207/418 (49%), Gaps = 21/418 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  ++K    A ++++       M+   C P+ V    L++ F +     +A+
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +V+E +  +G   +    N +I+  CK  +++ A + L+ + S G SPD ++Y  ++  L
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C     E A ++  +++R NC P  +T+   I     +G  ++A  L+++M         
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C +G V  A +   S+    C+P+ I+Y  LL  L N  + +   +L+ E
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAE 482

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ +   PNVVT+++L+S  C+ G  ++A++++    E G TP+  +Y+ L+     D  
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCN 542

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            + A+E L  ++S+G  PDIV Y++I+    +    ++A+++F  + D+G  P    YN 
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +  AL    +   A+   + M+S G  P+E+TY +LI  L  +  + E   LL ++ S
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCS 660


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 267/518 (51%), Gaps = 50/518 (9%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+L  ++ M+  GC+P VV  T L++   +     +A+ V++ +   G  P++  Y
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I+G C+  +++ A + L+RL S GF PD V+Y  ++  LC+    E   ++F +++ 
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQ 212
            NC P  +T+ +L++     G  ++A+++L++M                  +CK+G V  
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AFQF+ ++ S GC PD ISY  +L+ L    +WE+ ++L+ EM+ +   PN VT++  I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR------------------ 314
            LC+ G  E A  ++    E G   +  +Y+ L++ +C  GR                  
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458

Query: 315 --------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
                         LD A E L  M+   C P++V +N +++ FC+ G  D+A+E+ E++
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + GC PN+ +YNT+   +    +   AL ++  ++S G+ PD +TY+S+I  L R+  V
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA+ +   ++    RP  + YN I+L  CK    + +I+  A M   GC PNE TY+ L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           IEG+    +  E  +L   L S   ++++  +     F
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 676



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 243/494 (49%), Gaps = 60/494 (12%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE 103
           ++R        E+   ++   + G  PDV +CTKLI+   +  +++ A RV+   E+ G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 104 P-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             DVFAYN L++G+C+  Q++ A +++    S   +PD  TY  +I  LC RG +  A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D +L   C+P+V+TYT+L++A                  +CK    GQA + +  + +
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEA------------------VCKSTGFGQAMEVLDEMRA 208

Query: 223 RGCQPDVISYNMLLRTLLNMG-----------------------------------KWEE 247
           +GC P++++YN+++  +   G                                   +WE+
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            E+L  EM+ +   PN VT+ +L+   CR G  E A+ VL      G   +    + +I+
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK GR+D A +FL+ M S GC PD ++Y T+L   C+    + A E+ +++    CPP
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  ++NT    L   G   +A  +I +M   G E + +TYN+L++  C  G VD A+ L 
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M     +P  I+Y  ++ G C   R++ + E+LA M +K C PN  T+ +L+      
Sbjct: 449 YSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 488 GWRAEAMELANALV 501
           G   EA+EL   ++
Sbjct: 506 GLMDEAIELVEQMM 519



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 56/442 (12%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           NA +      + +  A +++DR  SRG +PDV     +I +LC RG    A +V     R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------GMCKKGMVGQAFQ 215
                 V  Y  L+      GQ D A +L+  M              G+C +G VG+A  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  RGCQP V++Y +LL  +     + +  +++ EM ++G  PN+VTY+++I+ +C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSY--------------------------------- 302
           R+G+ +DA + L      G  PD  SY                                 
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 303 --DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
             D L+  +C+ G ++ AI+ L+ M   GC  +    N ++   CK G  D A +    +
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              GC P+  SY T+   L  +     A  ++ EM+ K   P+E+T+N+ I  LC+ G++
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           ++A  L+  M        +++YN ++ GFC   R++ ++E+  +M    CKPN  TY  L
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTL 463

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           + G+      AE ++ A  L++
Sbjct: 464 LTGL----CNAERLDAAAELLA 481



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 208/418 (49%), Gaps = 21/418 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  ++K    A ++++       M+   C P+ V    L++ F +     +A+
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +V+E +  +G   +    N +I+  CK  +++ A + L+ + S G SPD ++Y  ++  L
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C     E A ++  +++R NC P  +T+   I     +G  ++A  L+++M         
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C +G V  A +   S+    C+P+ I+Y  LL  L N  + +   +L+ E
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAE 482

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ +   PNVVT+++L+S  C+ G  ++A++++    E G TP+  +Y+ L+    KD  
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 542

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            + A+E L  ++S+G  PDIV Y++I+    +    ++A+++F  + D+G  P    YN 
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +  AL    +   A+   + M+S G  P+E+TY +LI  L  +  + E   LL ++ S
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCS 660



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 3/174 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + G  DE++  +E M+ +GC P+++    L+    ++  S +A+ ++  L 
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  Y+++I    + +++E A K+   ++  G  P  V YN ++ +LC R   +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
            A   F  ++ + C P  +TY  LI+    E    +   LL E  +C +G++ +
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE--LCSRGVLNK 666


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 142/356 (39%), Positives = 212/356 (59%), Gaps = 18/356 (5%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N  +  L   G +E  F+  + ++     P +I  T LI+                  G 
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIR------------------GF 129

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G   +A + +  +E  G  PDVI+YN+L+  + + G+W + EKL+ +M+ RG  P+V
Sbjct: 130 CKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSV 189

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT++ILI+ LCR G    A+DVL    + G TP++ SY+PL+  +CK+ +++ AIE+L  
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M S GC PDIV YNT+L A CK+G  D A+E+  +LS  GC P + +YNT+   L   G 
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 309

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  ++ EM +KG++PD ITY+SL+  L R+G VDEA+    D+E    +P  I+YN 
Sbjct: 310 TDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNA 369

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+LG CK R+ + +I+ LA M ++GCKP E +Y +LIEG+ Y G   EA+EL N L
Sbjct: 370 IMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 203/392 (51%), Gaps = 30/392 (7%)

Query: 21  SAETRPNTHLLSFDVKETQFMKL-----------IKRSFRAGKFDESLYFIESMVANGCK 69
           S +  PN HL +  V  +    L           + +  R G+ +E   F+ESMV  G  
Sbjct: 57  SLDKLPNGHLGNGHVSLSPIHSLTNFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDI 116

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKV 128
           PD++ CT LI+ F +  K+ KA R+MEI+E  G  PDV  YN LISG C   +   A K+
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L  +  RG SP VVT+NI+I  LC +G++  A  V +++ +  C P  ++Y  L+     
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH---- 232

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G CK+  + +A +++  + SRGC PD+++YN LL  L   GK +  
Sbjct: 233 --------------GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAA 278

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            +L+ ++ S+G  P ++TY+ +I  L + GKT+ A  +L   + KGL PD  +Y  L+  
Sbjct: 279 VELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGG 338

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
             ++G++D AI+F   +   G  P+ + YN I+   CK    D+A++    +   GC P 
Sbjct: 339 LSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPT 398

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
            +SY  +   L   G    AL +++E+  +G+
Sbjct: 399 EASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 17/338 (5%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N  +S   +  ++E   + L+ +  RG  PD++    +I   C  G    A ++ + +  
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQ 212
               P VITY +LI      G+   A KLL +M                  +C+KG++G+
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +   GC P+ +SYN LL       K E   + + +M SRG  P++VTY+ L++
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +LC+DGK + AV++L     KG +P   +Y+ +I    K G+ D A + LD M + G  P
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DI+ Y++++    + G  D+A++ F  L  +G  PN  +YN +   L  +    RA+  +
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           + M+ +G +P E +Y  LI  L  +G+  EA+ LL ++
Sbjct: 388 AYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 4/346 (1%)

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL---LDEMGMCKKGMVGQAF 214
              F  F  L R+N + +     + ++   L+     A+     L  +     G +G   
Sbjct: 11  HEGFCSFQHLHRENTRTSSAFAGVRVRVRKLKRSRIFAVSFNGKLQSLDKLPNGHLGNGH 70

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             +  + S     ++ S N L + + N G+ EEG + +  M+ RG  P+++  + LI   
Sbjct: 71  VSLSPIHSLTNFEEIESNNNLSKLVRN-GELEEGFRFLESMVYRGDIPDIIPCTSLIRGF 129

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ GKT  A  ++   ++ G  PD  +Y+ LIS  C  GR   A + L  M+  GC P +
Sbjct: 130 CKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSV 189

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V +N ++   C+ G   +A+++ EK+   GC PN  SYN +           RA+  + +
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M S+G  PD +TYN+L++ LC+DG VD AV LL  + S    P +I+YN +I G  K  +
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 309

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +++ ++L  M  KG KP+  TY  L+ G+   G   EA++  + L
Sbjct: 310 TDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +EI  N+ +S L R+G ++E    L  M      P +I    +I GFCK  +  ++  ++
Sbjct: 83  EEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIM 142

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             + + G  P+  TY +LI G+   G   +A +L   +V
Sbjct: 143 EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMV 181


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 271/529 (51%), Gaps = 50/529 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+     G+  E+L  ++ M+  GC+P VV  T L++   +     +A+ V++ + 
Sbjct: 179 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +I+G C+  +++ A + L+RL S GF PD V+Y  ++  LC+    E
Sbjct: 239 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 298

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
              ++F +++  NC P  +T+ +L++     G  ++A+++L++M                
Sbjct: 299 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 358

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G V  AFQF+ ++ S GC PD ISY  +L+ L    +WE+ ++L+ EM+ +   
Sbjct: 359 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 418

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR------- 314
           PN VT++  I  LC+ G  E A  ++    E G   +  +Y+ L++ +C  GR       
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 478

Query: 315 -------------------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                    LD A E L  M+   C P++V +N +++ FC+ G 
Sbjct: 479 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+E+ E++ + GC PN+ +YNT+   +    +   AL ++  ++S G+ PD +TY+S
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  L R+  V+EA+ +   ++    RP  + YN I+L  CK    + +I+  A M   G
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           C PNE TY+ LIEG+    +  E  +L   L S   ++++  +     F
Sbjct: 659 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKF 707



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 238/479 (49%), Gaps = 60/479 (12%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
            ++   + G  PDV +CTKLI+   +  +++ A RV+   E+ G   DVFAYN L++G+C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +  Q++ A +++    S   +PD  TY  +I  LC RG +  A  + D +L   C+P+V+
Sbjct: 156 RYGQLDAARRLI---ASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TYT+L++A                  +CK    GQA + +  + ++GC P++++YN+++ 
Sbjct: 213 TYTVLLEA------------------VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 254

Query: 238 TLLNMG-----------------------------------KWEEGEKLMTEMISRGLEP 262
            +   G                                   +WE+ E+L  EM+ +   P
Sbjct: 255 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 314

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N VT+ +L+   CR G  E A+ VL      G   +    + +I+  CK GR+D A +FL
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M S GC PD ++Y T+L   C+    + A E+ +++    CPPN  ++NT    L   
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G   +A  +I +M   G E + +TYN+L++  C  G VD A+ L   M     +P  I+Y
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITY 491

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             ++ G C   R++ + E+LA M +K C PN  T+ +L+      G   EA+EL   ++
Sbjct: 492 TTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 200/427 (46%), Gaps = 56/427 (13%)

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A +++DR  SRG +PDV     +I +LC RG    A +V     R      V  Y  L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 185 ATMLEGQTDKAMKLLDEM--------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                GQ D A +L+  M              G+C +G VG+A   +  +  RGCQP V+
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y +LL  +     + +  +++ EM ++G  PN+VTY+++I+ +CR+G+ +DA + L   
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 291 KEKGLTPDAYSY-----------------------------------DPLISAYCKDGRL 315
              G  PD  SY                                   D L+  +C+ G +
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + AI+ L+ M   GC  +    N ++   CK G  D A +    +   GC P+  SY T+
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 392

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              L  +     A  ++ EM+ K   P+E+T+N+ I  LC+ G++++A  L+  M     
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              +++YN ++ GFC   R++ ++E+  +M    CKPN  TY  L+ G+      AE ++
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGL----CNAERLD 505

Query: 496 LANALVS 502
            A  L++
Sbjct: 506 AAAELLA 512



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 202/398 (50%), Gaps = 22/398 (5%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F  L++   R G  + ++  +E M  +GC  +  +C  +I    ++ + + A + +
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
             +  YG  PD  +Y  ++ G C+A + E A ++L  +  +   P+ VT+N  I  LC +
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G+IE A  + +Q+    C+  ++TY  L+    ++G+ D A++L   M            
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM------------ 482

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                     C+P+ I+Y  LL  L N  + +   +L+ EM+ +   PNVVT+++L+S  
Sbjct: 483 ---------PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ G  ++A++++    E G TP+  +Y+ L+    KD   + A+E L  ++S+G  PDI
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V Y++I+    +    ++A+++F  + D+G  P    YN +  AL    +   A+   + 
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           M+S G  P+E+TY +LI  L  +  + E   LL ++ S
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCS 691



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 4/300 (1%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A + V    SRG  PDV     L+R L   G+  +  +++      G   +V  Y+ L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  CR G+ + A    R      + PDAY+Y P+I   C  GR+  A+  LD M+  GC 
Sbjct: 152 AGYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P +V Y  +L A CK+    QA+E+ +++   GC PN+ +YN + + +   G    A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           ++ + S G +PD ++Y +++  LC     ++   L  +M      P  +++++++  FC+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              +  +I+VL  M   GC  N T   ++I  I   G   +A +  N + S +  S DT 
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS-YGCSPDTI 387


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 266/514 (51%), Gaps = 61/514 (11%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G+ D +L  +ES +   C PDV +  +L++   +  +   A RV+E            Y+
Sbjct: 70  GELDAALRVVESSL---CPPDVALANRLVRDLCRRGRPADAARVVEACGSAAT--AVTYS 124

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           AL  G+C+  +++ A +V+D +      P    YN ++ +LC RG +  A  + D +L  
Sbjct: 125 ALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYR 181

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C P V+TY IL++A        +AM+L+D M                 GMC++G V  A
Sbjct: 182 GCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYA 241

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + + SL S GC P+ ++YN +L+ L   G+WE+ E+L+ EM S    P+  T S++ISS
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC--- 330
           LC++G  + A+ +L    +   T +  +Y+ ++S  C+ G +D A+  L  M +DGC   
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPN 361

Query: 331 --------------------------------LPDIVNYNTILAAFCKNGNADQALEIFE 358
                                           LPDI+ +NTI+   C+ G   QA+E+F+
Sbjct: 362 IFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK 421

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + GC PN  +Y+++   L  +G   ++L +++EM SKG  P EI Y+ L  CL  + 
Sbjct: 422 QMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEED 480

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + EA+ ++  ++ T   P  + YN I+LG C+  + +++I++L+ M   GC P+E+TY 
Sbjct: 481 KLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYS 540

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
           +LI+G+ + G+  EA EL + L S   I  +  K
Sbjct: 541 ILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIK 574



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 207/410 (50%), Gaps = 52/410 (12%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  ++L  +++M+  GC PDVV    L++   + R   +A+ +++++   G  P    Y
Sbjct: 166 GQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTY 225

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++ G C+   ++ A ++L+ L S G +P+ V YN ++  L + G  E   ++  ++  
Sbjct: 226 NVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFS 285

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           +NC P+  T +++I +   EG   +A++LL++M                 G+C++G V  
Sbjct: 286 ENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDG 345

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   + ++++ GC+P++ +YN+L++ L N  +WE+ E LM +M      P+++T++ +I 
Sbjct: 346 ALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIG 405

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--- 329
            LC+ G T  AV+V +   EKG  P++ +Y  +I    K G+++ ++E L+ M S G   
Sbjct: 406 FLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP 465

Query: 330 ---------CL----------------------PDIVNYNTILAAFCKNGNADQALEIFE 358
                    CL                      P  V YNTIL   C+NG  DQA++I  
Sbjct: 466 EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILS 525

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
            +   GC P+ S+Y+ +   L   G    A  ++S + S+ +  D +  N
Sbjct: 526 NMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+   + GK ++SL  +  M + G  P++     L +   +E K  +A++++  L+
Sbjct: 435 YSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINY-HLLAECLNEEDKLVEAIQMVHKLQ 493

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P    YN ++ G C+  + + A  +L  + S G  PD  TY+I+I  L   G ++
Sbjct: 494 DTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMK 553

Query: 159 SAFKVFDQL 167
            A ++   L
Sbjct: 554 EARELLSTL 562


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 263/513 (51%), Gaps = 31/513 (6%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRA----GKFDESLYFIESMV 64
           NP+S  +   S   +   ++          +  +  KR  R+     + D++L  ++S+ 
Sbjct: 26  NPRSRRQRATSEQHDQHVDSKWRRQPRAPPRRGEGPKRRLRSLIQREEIDDALALVDSIA 85

Query: 65  ANG----CKP-DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKA 119
           + G    C P  VV C  LIK+     +   A RV   L       V  YN +++G+C+A
Sbjct: 86  SGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASAT--VVTYNTMVNGYCRA 143

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            +IE A +++  +    F PD  T+N +I +LC RG +  A  VFD +L   C P+V+TY
Sbjct: 144 GRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTY 200

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
           +IL+ AT       +AM LLDEM                  MC +G V +A   +  L S
Sbjct: 201 SILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC+PD ++Y  +L++L    +W+E E+L  EM S    P+ VT++ +++SLC+ G  + 
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ V+    E G  PD  +Y  ++   C  GR+D A+E L  + S GC PD + Y T+L 
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 380

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C     + A E+  ++    CPP+  ++NT+ ++L   G   RA+ ++ +M   G  P
Sbjct: 381 GLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNP 440

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYNS+I  LC +  +D+A+ LL +++S   +P ++++N ++ G C   R  ++ +++
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
             M    C P+ TT+  +I  +   G   +A+E
Sbjct: 501 VNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/593 (27%), Positives = 270/593 (45%), Gaps = 86/593 (14%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           S  V   N   N   R     + R     + F      F  LI+     G+  ++L   +
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFD 186

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            M+  GC P VV  + L+    +     +A+ +++ +   G EPD+  YN LI+  C   
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEG 246

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
            ++ A  +L  L S G  PD VTY  ++ SLC     +   ++F ++  + C P  +T+ 
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFN 306

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            ++ +   +G  D+A+K++D M                 G+C  G V  A + +  L+S 
Sbjct: 307 TIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC+PD I+Y  +L+ L ++ +WE  E+LM EM+     P+ VT++ +I+SLC+ G  + A
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL-- 341
           + V+    E G  PD  +Y+ +I   C +  +D A+E L  + S GC PDIV +NT+L  
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486

Query: 342 ---------------------------------AAFCKNGNADQALEIFEKLSDVGCPPN 368
                                             + C+ G   QA+E  + +++ GC PN
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEM--------------------------------- 395
            S+YN +  AL  +G    AL ++S M                                 
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVM 606

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G+ PD ITY SL   +CR+   D A+ +L  ++     P    YN I+LGFC+  R 
Sbjct: 607 VSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRT 666

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           + +I+  A M   GC P+E+TY++L+E + Y     EA +L   L S+  + +
Sbjct: 667 DIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDK 719



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 159/298 (53%), Gaps = 11/298 (3%)

Query: 210 VGQAFQFVRSLESRG----CQP-DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           +  A   V S+ S G    C P  V+  N+L++ L + G+  + E++   +   G    V
Sbjct: 74  IDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATV 130

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ +++  CR G+ EDA  ++         PD ++++PLI A C  GR+  A+   D 
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDD 187

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  GC P +V Y+ +L A CK     QA+ + +++   GC P++ +YN + +A+ + GD
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL ++S++ S G +PD +TY  ++  LC      E   L  +M S +  P  +++N 
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I+   C+   ++ +I+V+  M E GC P+  TY  +++G+   G   +A+EL + L S
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365


>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g79080, chloroplastic; Flags: Precursor
 gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
 gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 260/489 (53%), Gaps = 21/489 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNA 111
             +S   +ES+V  G KP+V   T+L+    +  +  KA+RV+E++   G  PD  AY  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L++  CK   +  A ++++++   G+  + VTYN ++  LC  G +  + +  ++L++  
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
             P   TY+ L++A   E  TD+A+KLLDE+                 G CK+G    A 
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              R L ++G + +V+SYN+LLR L   G+WEE   L+ EM      P+VVTY+ILI+SL
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 275 CRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              G+TE A+ VL+  +         A SY+P+I+  CK+G++DL ++ LD MI   C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +   YN I +    N    +A  I + LS+         Y ++ ++L   G+   A  ++
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME-STRFRPTVISYNIIILGFCK 451
            EM   G +PD  TY++LI  LC +GM   A+ +L  ME S   +PTV ++N +ILG CK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            RR + ++EV   M EK   PNETTY +L+EGI +      A E+ + L     I ++  
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

Query: 512 KRLNRTFPL 520
            R+   F L
Sbjct: 567 DRIVMQFNL 575



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 21/350 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G  ++SL F+E ++  G  P+    + L++  ++ER +++AV+++ EI+ K GEP++ +Y
Sbjct: 190 GSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 249

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++GFCK  + + A  +   L ++GF  +VV+YNI++  LC  G  E A  +  ++  
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------------------MCKKGMV 210
            +  P+V+TY ILI +    G+T++A+++L EM                    +CK+G V
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +  +  R C+P+  +YN +     +  K +E   ++  + ++        Y  +
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 429

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDG 329
           I+SLCR G T  A  +L      G  PDA++Y  LI   C +G    A+E L  M  S+ 
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 489

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           C P + N+N ++   CK    D A+E+FE + +    PN ++Y  +   +
Sbjct: 490 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 8/255 (3%)

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           D+   L +    G  P+      L+   CK  RL  AI  ++ M+S G +PD   Y  ++
Sbjct: 89  DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK GN   A+++ EK+ D G P N  +YN +   L   G   ++L  +  ++ KG+ 
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+  TY+ L+    ++   DEAV LL ++      P ++SYN+++ GFCK  R ++++ +
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRDTFKR 513
              +  KG K N  +Y +L+  +   G   EA  L   +        V  + I  ++   
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328

Query: 514 LNRTFPLLDVYKEIS 528
             RT   L V KE+S
Sbjct: 329 HGRTEQALQVLKEMS 343



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   +    E L   G  PNV+    +   L  +    +A+ +I  M+S GI PD   Y 
Sbjct: 86  NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            L++ LC+ G V  A+ L+  ME   +    ++YN ++ G C    +N+S++ +  + +K
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G  PN  TY  L+E         EA++L + ++
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDV 106
           R G    +   +  M   G  PD    + LI+    E     A+ V+ I+E+    +P V
Sbjct: 435 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTV 494

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +NA+I G CK  + +LA +V + +  +   P+  TY I++  +     +E A +V D+
Sbjct: 495 DNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDE 554

Query: 167 L 167
           L
Sbjct: 555 L 555


>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
           Acinetobacter calcoaceticus [Arabidopsis thaliana]
          Length = 566

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 260/489 (53%), Gaps = 21/489 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNA 111
             +S   +ES+V  G KP+V   T+L+    +  +  KA+RV+E++   G  PD  AY  
Sbjct: 77  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 136

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L++  CK   +  A ++++++   G+  + VTYN ++  LC  G +  + +  ++L++  
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
             P   TY+ L++A   E  TD+A+KLLDE+                 G CK+G    A 
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 256

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              R L ++G + +V+SYN+LLR L   G+WEE   L+ EM      P+VVTY+ILI+SL
Sbjct: 257 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 316

Query: 275 CRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              G+TE A+ VL+  +         A SY+P+I+  CK+G++DL ++ LD MI   C P
Sbjct: 317 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 376

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +   YN I +    N    +A  I + LS+         Y ++ ++L   G+   A  ++
Sbjct: 377 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 436

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME-STRFRPTVISYNIIILGFCK 451
            EM   G +PD  TY++LI  LC +GM   A+ +L  ME S   +PTV ++N +ILG CK
Sbjct: 437 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 496

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            RR + ++EV   M EK   PNETTY +L+EGI +      A E+ + L     I ++  
Sbjct: 497 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 556

Query: 512 KRLNRTFPL 520
            R+   F L
Sbjct: 557 DRIVMQFNL 565



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 21/350 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G  ++SL F+E ++  G  P+    + L++  ++ER +++AV+++ EI+ K GEP++ +Y
Sbjct: 180 GSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 239

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++GFCK  + + A  +   L ++GF  +VV+YNI++  LC  G  E A  +  ++  
Sbjct: 240 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 299

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------------------MCKKGMV 210
            +  P+V+TY ILI +    G+T++A+++L EM                    +CK+G V
Sbjct: 300 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 359

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +  +  R C+P+  +YN +     +  K +E   ++  + ++        Y  +
Sbjct: 360 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 419

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDG 329
           I+SLCR G T  A  +L      G  PDA++Y  LI   C +G    A+E L  M  S+ 
Sbjct: 420 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 479

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           C P + N+N ++   CK    D A+E+FE + +    PN ++Y  +   +
Sbjct: 480 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 529



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 8/255 (3%)

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           D+   L +    G  P+      L+   CK  RL  AI  ++ M+S G +PD   Y  ++
Sbjct: 79  DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 138

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK GN   A+++ EK+ D G P N  +YN +   L   G   ++L  +  ++ KG+ 
Sbjct: 139 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 198

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+  TY+ L+    ++   DEAV LL ++      P ++SYN+++ GFCK  R ++++ +
Sbjct: 199 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 258

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRDTFKR 513
              +  KG K N  +Y +L+  +   G   EA  L   +        V  + I  ++   
Sbjct: 259 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 318

Query: 514 LNRTFPLLDVYKEIS 528
             RT   L V KE+S
Sbjct: 319 HGRTEQALQVLKEMS 333



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   +    E L   G  PNV+    +   L  +    +A+ +I  M+S GI PD   Y 
Sbjct: 76  NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 135

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            L++ LC+ G V  A+ L+  ME   +    ++YN ++ G C    +N+S++ +  + +K
Sbjct: 136 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 195

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G  PN  TY  L+E         EA++L + ++
Sbjct: 196 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 228



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDV 106
           R G    +   +  M   G  PD    + LI+    E     A+ V+ I+E+    +P V
Sbjct: 425 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTV 484

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +NA+I G CK  + +LA +V + +  +   P+  TY I++  +     +E A +V D+
Sbjct: 485 DNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDE 544

Query: 167 L 167
           L
Sbjct: 545 L 545


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 273/548 (49%), Gaps = 70/548 (12%)

Query: 15  RVRVSSSAETRPNTHLLSFDVKETQFM--KLIKRSFR------AGKFDESLYFIESMVAN 66
           R+R SS A+  P   L S   ++ Q    +L+    R       G  D +L  +ES    
Sbjct: 42  RLR-SSGAKPPPTPRLESPTTRQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVESSPR- 99

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELAN 126
              PD  +  +L++   +  + + A RV+          V AY AL  G+C+A ++  A 
Sbjct: 100 --PPDAALANRLVRDLCRRGRPDDAERVVGACGPAAT--VVAYGALTDGYCRAGRLGDAR 155

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +V+  +      P+  TYN +I +LC RG +  A  V D +L   C P V+TY IL++AT
Sbjct: 156 RVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEAT 212

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
                  +AM+L+D M                 GMC +G V  A + +R+L S GC+P  
Sbjct: 213 CKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPST 272

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN +L+ L +  +W + ++L+TEM+     PN  T++++I SLCR G  + A+ +L  
Sbjct: 273 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332

Query: 290 AKEKGLTPDAYSYDPLISAYCK----DGRLDL---------------------------- 317
             + G T +  +Y+ +I+  C+    DG + L                            
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392

Query: 318 ---AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A E +D M  +GCLPD V +NT++   C+ G    A+E+F+++ D GC PN  +Y+T
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + S L  +    +AL + +EM  KG  PD+I Y  L  CL  D  ++EA+  +  ++ + 
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSG 511

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P  + YN I+LG C+  +   +I+++A M   GC P++ TYV+LIEG+ Y G+  EA 
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 571

Query: 495 ELANALVS 502
           EL   L S
Sbjct: 572 ELLIKLCS 579


>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 580

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/490 (32%), Positives = 260/490 (53%), Gaps = 22/490 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNA 111
             ++   +E +V +G KP+V   T+L+    +  +  KA+RV+E++   G  PD  AY  
Sbjct: 90  LSDTFSHLECLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 149

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L++  CK   +  A ++++++   GF  + VTYN ++  LC  G +  + +  ++L++  
Sbjct: 150 LVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRG 209

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
             P   TY+ L++A   E  TD+A+KLLDE+                 G CK+G    A 
Sbjct: 210 LAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAM 269

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +  R L  +G + +V+SYN+LLR L   G+W+E   L+ EM      P+VVTY+ILI+SL
Sbjct: 270 KLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSVVTYNILINSL 329

Query: 275 CRDGKTEDAVDVLR---AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              G+TE A+ VL+             A SY+P+I+  CK+G++DL ++ LD MI   C 
Sbjct: 330 AFHGRTEQAMQVLKEMSKGHHHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 389

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+   Y+ I A    NG   +A  I + LS+         Y ++ +++   G+   A  +
Sbjct: 390 PNEGTYSAIGALCEHNGKVQEAFYIIQSLSNKQKCCTHDFYKSVITSMCRKGNTFAAFQL 449

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF-RPTVISYNIIILGFC 450
           + EM   G +PD  TY++LI  LC +GM   A+ +L  ME + + +PTV ++N +ILG C
Sbjct: 450 LYEMTRCGFDPDAHTYSALIRGLCLEGMFIGAMEVLSIMEESEYHKPTVDNFNAMILGLC 509

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K RR + ++EV   M  K   PNETTY +++EGI +      A E+   L S   I ++ 
Sbjct: 510 KIRRTDLALEVFEMMVGKKRMPNETTYAIIVEGIAHEDELELAKEVLEELRSRKVIGQNA 569

Query: 511 FKRLNRTFPL 520
             R+   F L
Sbjct: 570 VDRIVMQFNL 579



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 190/372 (51%), Gaps = 22/372 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G  ++SL F+E ++  G  P+    + L++  ++ER +++AV+++ EI+ K G+P++ +Y
Sbjct: 193 GSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSY 252

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++GFCK  + + A K+   L  +GF  +VV+YNI++  LC  G  + A  +  ++  
Sbjct: 253 NVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDG 312

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------------MCKKGM 209
            +  P+V+TY ILI +    G+T++AM++L EM                     +CK+G 
Sbjct: 313 GDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTATSYNPVIARLCKEGK 372

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V    + +  +  R C+P+  +Y+ +     + GK +E   ++  + ++        Y  
Sbjct: 373 VDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQSLSNKQKCCTHDFYKS 432

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISD 328
           +I+S+CR G T  A  +L      G  PDA++Y  LI   C +G    A+E L  M  S+
Sbjct: 433 VITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFIGAMEVLSIMEESE 492

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              P + N+N ++   CK    D ALE+FE +      PN ++Y  +   +    +   A
Sbjct: 493 YHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAIIVEGIAHEDELELA 552

Query: 389 LGMISEMLSKGI 400
             ++ E+ S+ +
Sbjct: 553 KEVLEELRSRKV 564


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/464 (31%), Positives = 237/464 (51%), Gaps = 19/464 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GK   +   I+ M      P    C  LI+   +   + +A RV++I+   G  PD+  Y
Sbjct: 53  GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 112

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G CK   ++ A ++LD +   G  PD +TYN ++  +   G  + A   +   LR
Sbjct: 113 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLR 172

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C   +ITYT+LI+       T +AM++L++M +                   GC PD+
Sbjct: 173 KGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAI------------------EGCYPDI 214

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+      GK+E+   ++  ++S G+ PN VTY+ L+ SLC  G  ++  ++L  
Sbjct: 215 VTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLI 274

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                  P   +Y+ LI+  CK G LD AI F D M+S  CLPDI+ YNT+LAA CK G 
Sbjct: 275 MNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGM 334

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+AL +   L+D  C P + +YN +   L   G   +A+ +  EM+ +G  PD+IT+ +
Sbjct: 335 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 394

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L   L R  +V++A+ +L +M     R    ++  +I G CK ++++ +I+VL  M    
Sbjct: 395 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQ 454

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           CKPNE  Y  +I+G+G  G   EA +L   L  +     +T   
Sbjct: 455 CKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREETMPH 498



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 210/396 (53%), Gaps = 23/396 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N ++ +LCS+G + +A ++ D + R N  P   +   LI+  +    T++A ++L
Sbjct: 38  DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M                 G+CKKG++  A + +  +   GC PD I+YN +LR + + 
Sbjct: 98  KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 157

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G +++      + + +G    ++TY++LI  +C+   T  A++VL     +G  PD  +Y
Sbjct: 158 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 217

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L++  CK G+ +     +  ++S G  P+ V YNT+L + C +G  D+  EI   ++ 
Sbjct: 218 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 277

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
              PP V +YN + + L   G   RA+    +M+S    PD ITYN+L++ LC++GMVDE
Sbjct: 278 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 337

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +  TR  P +I+YNI+I G  K   + +++E+   M E+G  P++ T+  L  
Sbjct: 338 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLF- 396

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
              +G +R + +E  +ALV +  +++   +  N  F
Sbjct: 397 ---WGLFRLDLVE--DALVILKEMNKRNQRIKNSAF 427



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 18/342 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++  F  G FD+++ F +  +  GC   ++  T LI+   +   + +A+ V+E + 
Sbjct: 147 YNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMA 206

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN+L++  CK  + E    ++  L S G  P+ VTYN ++ SLC+ G  +
Sbjct: 207 IEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWD 266

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++   +   +  PTV+TY ILI      G  D+A+   D+M                
Sbjct: 267 EVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 326

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+GMV +A   + SL    C P +I+YN+++  L   G  E+  +L  EMI RG  
Sbjct: 327 AALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFA 386

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T+  L   L R    EDA+ +L+   ++       ++  +I   CK  ++D+AI+ 
Sbjct: 387 PDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQV 446

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
           L+ M+S  C P+   Y+ I+      G  ++A ++ +KL+++
Sbjct: 447 LEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTEL 488


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 250/487 (51%), Gaps = 23/487 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI    +A K D++   +  MV  G  PD V    ++    +  K  +A  ++ ++ E+ 
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P    YN LISG CK   ++ A  ++D   S GF PDVVTY+I+   LC RG I+ AF
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++  ++  + C P ++TY  LI       +T+KA +LL+ +                 G+
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL 195

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G + +A + V  +  RGC P VI+Y  L+  L   G+ +E   +  EM+S+    + 
Sbjct: 196 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 255

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y  L++  C+  +T++A  V+   +    TP    Y+ L+  YCK+GRLD      + 
Sbjct: 256 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 312

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   GC+P+I  YN ++   CK+G  D+A    E +   GC P+V SYN +   L+ +  
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ +M+  GI PD +TYN+L++  C++   D+AVG+L +M      P  ++YN 
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNE-TTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +I G  +T R+ ++ E++  M   GC  +  TTY  +I+ +   G   +A+ L + +   
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG- 491

Query: 504 HAISRDT 510
           H +  +T
Sbjct: 492 HGVEANT 498



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 220/452 (48%), Gaps = 49/452 (10%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PDVF YN LI G CKA++ + A+++L  +  RG +PD VT+N ++  LC  G  E
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   +   NC+P+  TY  LI     +   D+A  L+DE                 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+G + +AF+ V+ +   GC P++++YN L+  L    K E+  +L+  ++S G  
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+I++  LC++G+ + A+ ++    ++G TP   +Y  L+   C+ GR+D A   
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 322 LDYMISDGCLPD------IVN--------------------------YNTILAAFCKNGN 349
              M+S  C  D      +VN                          YN ++  +CK G 
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 302

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+   +FE ++  GC PN+ +YN +   L   G    A   +  M S G  PD ++YN 
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  L +     EA  +L  M      P  ++YN ++  FCK  R ++++ +L  M + G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             P+  TY  LI G+       +A EL + ++
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/581 (24%), Positives = 248/581 (42%), Gaps = 120/581 (20%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ DE+   ++ M  NGC P++V    LI    +  K+ KA  ++E L   G  PDV 
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++ G CK  +++ A K+++ +  RG +P V+TY  ++  LC  G ++ A  +F ++
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------- 202
           +  +C    + Y  L+       +T +A K++D +                         
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 203 ------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
                                   G+CK G V +AF F+ S+ S GC PDV+SYN+++  
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    K +E  +++ +MI  G+ P+ VTY+ L++  C++ + +DAV +L+   + G+ PD
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 299 -------------------AY-----------------SYDPLISAYCKDGRLDLAIEFL 322
                              AY                 +Y+ +I   CK+G L  A+  +
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 486

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV------------------- 363
           D+M   G   + V YN  +   CK G  D+A  +  ++  +                   
Sbjct: 487 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQL 546

Query: 364 --------------GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
                         G      ++N +  A   +     AL ++  M+ +G  P  ITYN 
Sbjct: 547 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNM 606

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I+CLC+   VD+A  L  +M       + +SY ++I G C   R  E+++VL  M    
Sbjct: 607 VITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSD 666

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS-MHAISRD 509
           C+ ++     L   +   G   EA EL   + + M ++S D
Sbjct: 667 CEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLSLD 707



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 160/308 (51%), Gaps = 15/308 (4%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  R   PDV +YN+L+  L    K ++  +++ EM+ RG+ P+ VT++ ++  LC+ GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E A  +L    E+   P   +Y+ LIS  CK   +D A   +D  +S G +PD+V Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +    CK G  D+A E+ +++S  GC PN+ +YNT+   L  +    +A  ++  ++S G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             PD +TY  ++  LC++G +D+A+ ++  M      P+VI+Y  ++ G C+T R++E+ 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFP 519
            +   M  K C  +   YV L+ G        EA ++ + +               R  P
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---------------RGTP 285

Query: 520 LLDVYKEI 527
            +DVY  +
Sbjct: 286 YIDVYNAL 293



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 163/364 (44%), Gaps = 53/364 (14%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V TY ILI       +TDKA ++L EM                    RG  PD +++N
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEM------------------VDRGVTPDTVTFN 49

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            ++  L   GK+E    L+  M  R   P+  TY+ LIS LC+    + A  ++      
Sbjct: 50  SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS 109

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD  +Y  L    CK GR+D A E +  M  +GC P++V YNT++   CK    ++A
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            E+ E L   G  P+V +Y  +   L   G   +AL M+  ML +G  P  ITY +L+  
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229

Query: 414 LCRDGMVDEAVGLLVDM--------------------------------ESTRFRPTVIS 441
           LCR G VDEA  +  +M                                +  R  P +  
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV 289

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN ++ G+CK  R++E   V   M  +GC PN  TY ++++G+   G   EA      L 
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF---LE 346

Query: 502 SMHA 505
           SMH+
Sbjct: 347 SMHS 350


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 249/487 (51%), Gaps = 23/487 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI    +A K D++   +  MV  G  PD V    ++    +  K  +A  ++ ++ E+ 
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P    YN LISG CK   ++ A  ++D   S GF PDVVTY+I+   LC RG I+ AF
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++  ++    C P ++TY  LI       +T+KA +LL+ +                 G+
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G + +A + V  +  RGC P VI+Y  L+  L   G+ +E   +  EM+S+    + 
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y  L++  C+  +T++A  V+   +    TP    Y+ L+  YCK+GRLD      + 
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   GC+P+I  YN ++   CK+G  D+A    E +   GC P+V SYN +   L+ +  
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ +M+  GI PD +TYN+L++  C++   D+AVG+L +M      P  ++YN 
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNE-TTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +I G  +T R+ ++ E++  M   GC  +  TTY  +I+ +   G   +A+ L + +   
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG- 742

Query: 504 HAISRDT 510
           H +  +T
Sbjct: 743 HGVEANT 749



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 249/516 (48%), Gaps = 55/516 (10%)

Query: 37  ETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           E     ++ R+F + G+  ++L    ++ +    PD +    +I    ++   + A+  +
Sbjct: 194 EVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFL 249

Query: 96  -EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            E+ E+   PDVF YN LI G CKA++ + A+++L  +  RG +PD VT+N ++  LC  
Sbjct: 250 KEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKA 309

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G  E A  +   +   NC+P+  TY  LI     +   D+A  L+DE             
Sbjct: 310 GKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTY 369

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK+G + +AF+ V+ +  +GC P++++YN L+  L    K E+  +L+  ++S
Sbjct: 370 SILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS 429

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G  P+VVTY+I++  LC++G+ + A+ ++    ++G TP   +Y  L+   C+ GR+D 
Sbjct: 430 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 489

Query: 318 AIEFLDYMISDGCLPD------IVN--------------------------YNTILAAFC 345
           A      M+S  C  D      +VN                          YN ++  +C
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYC 549

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  D+   +FE ++  GC PN+ +YN +   L   G    A   +  M S G  PD +
Sbjct: 550 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           +YN +I  L +     EA  +L  M      P  ++YN ++  FCK  R ++++ +L  M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            + G  P+  TY  LI G+       +A EL + ++
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 214/424 (50%), Gaps = 37/424 (8%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD + Y+ +I   C+ NQI+ A  +LD+ + RGF P+V  Y I+  + C  G ++ A ++
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEI 217

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F    R+   P  I Y  +I                   G C+K     A +F++ +  R
Sbjct: 218 F----RNIPSPDAIAYNAIIH------------------GHCRKNDCDGALEFLKEMNER 255

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PDV +YN+L+  L    K ++  +++ EM+ RG+ P+ VT++ ++  LC+ GK E A
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L    E+   P   +Y+ LIS  CK   +D A + +D  +S G +PD+V Y+ +   
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G  D+A E+ +++S  GC PN+ +YNT+   L  +    +A  ++  ++S G  PD
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY  ++  LC++G +D+A+ ++  M      P+VI+Y  ++ G C+T R++E+  +  
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            M  K C  +   YV L+ G        EA ++ + +               R  P +DV
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---------------RGTPYIDV 540

Query: 524 YKEI 527
           Y  +
Sbjct: 541 YNAL 544



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 246/538 (45%), Gaps = 84/538 (15%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ DE+   ++ M   GC P++V    LI    +  K+ KA  ++E L   G  PDV 
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV 437

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++ G CK  +++ A K+++ +  RG +P V+TY  ++  LC  G ++ A  +F ++
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------- 202
           +  +C    + Y  L+       +T +A K++D +                         
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 557

Query: 203 ------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
                                   G+CK G V +AF F+ S+ S GC PDV+SYN+++  
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    K +E  +++ +MI  G+ P+ VTY+ L++  C++ + +DAV +L+   + G+ PD
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIF 357
             +Y+ LIS   +  RL  A E +  M+ +GC+      YNTI+   CK G   QAL + 
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 737

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS-------------------- 397
           + ++  G   N  +YN     L   G    A  ++SEM +                    
Sbjct: 738 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQL 797

Query: 398 -------------KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
                        KG+     T+N LI    +   +DEA+ LL  M      P+VI+YN+
Sbjct: 798 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNM 857

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I   CK  +++++ E+   M  +G   +  +Y +LI G+   G   EA+++   + S
Sbjct: 858 VITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 202/412 (49%), Gaps = 34/412 (8%)

Query: 121 QIELANKVLDRLRS-------------RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           Q  + ++VL RL+              RGF     T N  + +L   G  +    +F+++
Sbjct: 92  QPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERM 151

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L     P   TY ++I++     Q DKA  +LD+                    CK G +
Sbjct: 152 LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRL 211

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +  R++ S    PD I+YN ++         +   + + EM  R + P+V TY+IL
Sbjct: 212 KDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNIL 267

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  KT+ A ++L    ++G+TPD  +++ ++   CK G+ + A   L  M    C
Sbjct: 268 IDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC 327

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P    YNT+++  CK  N D+A ++ ++    G  P+V +Y+ +   L   G    A  
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 387

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  KG  P+ +TYN+LI  LC+    ++A  LL  + S+ F P V++Y II+ G C
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  R++++++++  M ++GC P+  TY  L+EG+   G   EA  +   +VS
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 24/365 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK DE+  F+ESM + GC PDVV    +I   F+  K  +A +V++ + + G  PD  
Sbjct: 585 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 644

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L++ FCK  + + A  +L  +   G  PD VTYN +I  L     +  A+++  ++
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704

Query: 168 LRDNCKPTV-ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           LR+ C  +   TY  +I                    +CK+G + QA   +  +   G +
Sbjct: 705 LRNGCVVSACTTYNTIIDR------------------LCKEGCLKQALLLMDHMTGHGVE 746

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
            + ++YN+ +  L   G+ +E   L++EM +   E   V+Y+ +I  LC+  + + A  +
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTTVIIGLCKAEQLDRASKL 803

Query: 287 LRA-AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
            R     KGL   +++++ LI A+ K  RLD A+  L  M+  GC P ++ YN ++   C
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K    D+A E+F++++  G   +  SY  +   L   G    AL ++ EM S   E D++
Sbjct: 864 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDL 923

Query: 406 TYNSL 410
            +  +
Sbjct: 924 KWEDV 928



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 258 RG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           RG L+P VV+       L R    + A+     A ++G     ++ +  +    ++G  D
Sbjct: 88  RGTLQPAVVS-----RVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSD 142

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                 + M+  G  PD   Y+ ++ + C+    D+A  + +K    G  P VS Y  + 
Sbjct: 143 RIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILT 202

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            A   +G    AL +   + S    PD I YN++I   CR    D A+  L +M   +  
Sbjct: 203 RAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA 258

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V +YNI+I G CK  + +++ E+L  M ++G  P+  T+  +++G+     +A   E 
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL----CKAGKFER 314

Query: 497 ANALVSMHA 505
           A++L+++ A
Sbjct: 315 AHSLLAVMA 323



 Score = 42.4 bits (98), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 48/110 (43%)

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G +    T N  +  L  +G  D    +   M    + P   +Y+++I   C+  +I++
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           +  +L     +G KP  + Y +L       G   +A+E+   + S  AI+
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIA 228


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 250/474 (52%), Gaps = 18/474 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KFD  +   E M       D+     LI  F +  +   A+ V+  
Sbjct: 81  VEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EPD+   ++L++G+C + +I  A  ++D++   G+ PD VT+N +I  L     
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + DQ+++  C+P ++TY  ++      G  D A+ LL +M              
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK   +  AF     +E++G +PDV +YN L+  L N G+W +  +L++ MI R 
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNVVT+S LI +  ++GK  +A  +     ++ + PD ++Y  LI+ +C   RLD A 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + MIS  C P++V YNT++  FCK    ++ +E+F ++S  G   N  +YNT+   L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           + +GD   A  +  +M+S G+ PD ITY+ L+  LC+ G +++A+ +   ++ ++  P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            +YNI+I G CK  ++ +  ++  ++  KG KPN   Y  +I G    G + EA
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 198/407 (48%), Gaps = 18/407 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+++    P +  +N L+S   K  + +L   + +R+++   S D+ +YNI+I   C R 
Sbjct: 70  EMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A  V  ++++   +P ++T + L+                   G C    +  A  
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLN------------------GYCHSKRISDAVA 171

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V  +   G +PD +++N L+  L    K  E   L+ +M+ RG +P++VTY  +++ LC
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  + A+ +L+  ++  +  D   Y+ +I   CK   +D A    + M + G  PD+ 
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN++++  C  G    A  +   + +    PNV +++ +  A    G  + A  +  EM
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + + I+PD  TY+SLI+  C    +DEA  +   M S    P V++YN +I GFCK +R+
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E +E+   M ++G   N  TY  LI+G+   G    A ++   +VS
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 145/264 (54%), Gaps = 2/264 (0%)

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            LLN+ K ++   L  EM+     P++V ++ L+S++ +  K +  + +    +   ++ 
Sbjct: 55  ALLNL-KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY 113

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D YSY+ LI+ +C+  +L LA+  L  M+  G  PDIV  +++L  +C +     A+ + 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +++ ++G  P+  ++NT+   L+       A+ ++ +M+ +G +PD +TY ++++ LC+ 
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G +D A+ LL  ME  +    V+ YN II G CK + I+++  +   M  KG +P+  TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 478 VLLIEGI-GYGGWRAEAMELANAL 500
             LI  +  YG W   +  L+N +
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMI 317



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 20/266 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE+ +  E M++  C P+VV    LIK F + ++  + + +   + + G   +   YN
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G  +A   ++A K+  ++ S G  PD++TY+I++  LC  G +E A  VF+ L + 
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY I+I+                  GMCK G V   +    SL  +G +P+VI
Sbjct: 495 KMEPDIYTYNIMIE------------------GMCKAGKVEDGWDLFCSLSLKGVKPNVI 536

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            Y  ++      G  EE + L  EM   G  P+   Y+ LI +  RDG    + ++++  
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLD 316
           +  G   DA +   +I+    DGRL+
Sbjct: 597 RSCGFVGDASTISMVINML-HDGRLE 621



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 4/157 (2%)

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKIRALGMISEMLSKGIEPDE 404
           N   D A+ +F ++      P++  +N + SA+      D + +LG    M +  I  D 
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLG--ERMQNLRISYDL 115

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            +YN LI+C CR   +  A+ +L  M    + P +++ + ++ G+C ++RI++++ ++  
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 175

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M E G KP+  T+  LI G+      +EA+ L + +V
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMV 212



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G+  EM+     P  + +N L+S + +    D  + L   M++ R    + SYNI+I 
Sbjct: 64  AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  ++  ++ VL  M + G +P+  T   L+ G  +    ++A+ L + +V M
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 252/484 (52%), Gaps = 34/484 (7%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN  L S          LI    +A +  ++L    +M  +G   D V+ T L+   ++E
Sbjct: 42  PNVFLCSI---------LIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKE 92

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           ++ ++A+ ++  +  +G EP+V  YN+LI G CK N+ + A ++ + ++S   SP +VTY
Sbjct: 93  KRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTY 152

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLR-------DNCKPTVITYTILIQATMLEGQTDKAMK 197
           N ++  L   G +E A  +F ++L        D C P VITY++LI       +  +A++
Sbjct: 153 NTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVE 212

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           LL+ M                 G+CK+  V  A++ +R +   GC P++++YN LL  L 
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 272

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
              +  +   LM +M  RG  PNVVTY  LI  LC+ G+ +DA  +L    +KG TPD  
Sbjct: 273 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 332

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            Y+ LI+  CK  ++D +I  L   +S G  PD+V Y++++   C++   D+A  +   +
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              GCPP+V  Y+T+   L  +G    A  +   M   G + D +TY++LI  LC+ G V
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEA  LL  M      P+ ++YN +I G C    ++E+IE++  M    C P+  TY +L
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512

Query: 481 IEGI 484
           I G+
Sbjct: 513 IHGM 516



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 246/455 (54%), Gaps = 31/455 (6%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGE-------PD 105
           D +    E M +  C P +V    L+   F+  K  +A+ +  E+L++          P+
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y+ LI G CKAN++  A ++L+ +++RG SPDV+TY I++  LC    + +A++V  
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           ++L   C P ++TY  L+                   G+C+   V  A   +R +  RGC
Sbjct: 251 EMLDAGCVPNLVTYNSLLH------------------GLCRARRVSDALALMRDMTCRGC 292

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P+V++Y  L+  L  +G+ ++   ++ +MI +G  P+++ Y++LI+ LC+  + ++++ 
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +LR A   G+ PD  +Y  +I   C+  RLD A   L Y+ S GC PD++ Y+T++   C
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  D+A +++E ++  GC  +V +Y+T+   L  +G    A  +++ M+  G  P  +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA-- 463
           TYNSLI  LC    +DEA+ L+ +ME +   P+ ++YNI+I G C+  R++ ++ +L   
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532

Query: 464 ---AMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
               +   G   +   Y  LI+G+   G  AEA++
Sbjct: 533 KARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 214/418 (51%), Gaps = 24/418 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PDV+ Y AL+ GFC+  +I+ A +  D +RS+   P+V   +I+I  LC       A +
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
            F  +         + YT L+     E + D+A+ +L EM                 G+C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR------- 258
           K     +A +    ++S  C P +++YN LL  L   GK E    L  EM+ R       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              PNV+TYS+LI  LC+  +   AV++L + K +G +PD  +Y  L+   CK+ ++  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E L  M+  GC+P++V YN++L   C+      AL +   ++  GC PNV +Y T+   
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    A  M+++M+ KG  PD + YN LI+ LC+   VDE++ LL    S   +P 
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           V++Y+ +I G C++ R++E+  +L  +  +GC P+   Y  LI+G+   G   EA +L
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 239/465 (51%), Gaps = 12/465 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++   R G+ D++    + M +    P+V +C+ LI    + ++S  A+R    ++
Sbjct: 12  YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G   D   Y AL+SG  K  +++ A  +L  +R  G  P+VVTYN +I  LC     +
Sbjct: 72  GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F+ +    C P+++TY  L+      G+ ++AM L  EM            +   
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM----------LDRRSH 181

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++ R C P+VI+Y++L+  L    +  +  +L+  M +RG  P+V+TY+IL+  LC++ 
Sbjct: 182 DMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K   A +VLR   + G  P+  +Y+ L+   C+  R+  A+  +  M   GC P++V Y 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK G    A  +   + D G  P++  YN + + L  +     ++ ++   +S 
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI+PD +TY+S+I  LCR   +DEA  LL+ ++S    P VI Y+ +I G CK  +++E+
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            ++   M   GC  +  TY  LI+G+   G   EA  L   +V M
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 465



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 211/436 (48%), Gaps = 30/436 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R S   + R + +++++ V       LI    +A +  +++  +ESM A GC PDV+  T
Sbjct: 178 RRSHDMDDRCSPNVITYSV-------LIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+    +E K   A  V+ E+L+    P++  YN+L+ G C+A ++  A  ++  +  R
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G +P+VVTY  +I  LC  G ++ A  +   ++     P ++ Y +LI       Q D++
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           + LL                    G+C+   + +A + +  ++SRGC PDVI Y+ L+  
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L   GK +E   L   M   G + +VVTYS LI  LC+ G+ ++A  +L      G  P 
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 470

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ LI   C    LD AIE ++ M    C P  V YN ++   C+    D A+ + E
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLE 530

Query: 359 K-----LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           +     ++  G   +  +Y+++   L  +G    AL    EM+  G+ PD ITY+ L+  
Sbjct: 531 QAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEG 590

Query: 414 LCRDGMVDEAVGLLVD 429
           L +   + E   L++D
Sbjct: 591 LKKSKDLHELRHLVLD 606



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 153/279 (54%), Gaps = 7/279 (2%)

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           CQPDV +Y  LLR     G+ ++ ++   EM S+ L PNV   SILI  LC+  ++ DA+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
              RA +  G+  D   Y  L+S   K+ RLD A+  L  M   GC P++V YN+++   
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK------ 398
           CKN   D+A E+FE +  V C P++ +YNT+   L+ +G   RA+ +  EML +      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 399 -GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
               P+ ITY+ LI  LC+   V +AV LL  M++    P VI+Y I++ G CK  ++  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + EVL  M + GC PN  TY  L+ G+      ++A+ L
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 42/213 (19%)

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV-------------------- 369
           C PD+  Y  +L  FC+ G  DQA   F+++      PNV                    
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 370 ---------------SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
                            Y  + S LW      +AL ++ EM   G EP+ +TYNSLI  L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK------ 468
           C++   D A  L   M+S    P++++YN ++ G  +T ++  ++ +   M ++      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 469 -GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             C PN  TY +LI+G+      ++A+EL  ++
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESM 217


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 244/446 (54%), Gaps = 20/446 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+   FR GK + ++   + M+      DV+    L+    +  K   A+     ++
Sbjct: 48  YNTLLDGLFRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD 106

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
               P+V  Y+ LI G CKAN++  A ++L+ +++RG SPDV+TY I++  LC    + +
Sbjct: 107 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 166

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A++V  ++L   C P ++TY  L+                   G+C+   V  A   +R 
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLH------------------GLCRARRVSDALALMRD 208

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  RGC P+V++Y  L+  L  +G+ ++   ++ +MI +G  P+++ Y++LI+ LC+  +
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++++ +LR A   G+ PD  +Y  +I   C+  RLD A   L Y+ S GC PD++ Y+T
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK G  D+A +++E ++  GC  +V +Y+T+   L  +G    A  +++ M+  G
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE-S 458
             P  +TYNSLI  LC    +DEA+ L+ +ME +   P+ ++YNI+I G C+  R++  +
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++    M + G  P+  TY +L+EG+
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGL 474



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 231/440 (52%), Gaps = 20/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY-GEPDVFAYNALISGFCKANQ 121
           M  +GC+P+VV    LI    +  + ++A  + E ++     P +  YN L+ G  +  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A  +   +  R  S DV+++NI++  LC  G IE+A + F ++  D C P VITY++
Sbjct: 61  LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI       +  +A++LL+ M                 G+CK+  V  A++ +R +   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P++++YN LL  L    +  +   LM +M  RG  PNVVTY  LI  LC+ G+ +DA 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L    +KG TPD   Y+ LI+  CK  ++D +I  L   +S G  PD+V Y++++   
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C++   D+A  +   +   GCPP+V  Y+T+   L  +G    A  +   M   G + D 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY++LI  LC+ G VDEA  LL  M      P+ ++YN +I G C    ++E+IE++  
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M    C P+  TY +LI G+
Sbjct: 419 MERSNCAPSAVTYNILIHGM 438



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 213/401 (53%), Gaps = 20/401 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP+V  YN+LI G CK N+ + A ++ + ++S   SP +VTYN ++  L   G +E A  
Sbjct: 7   EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++L D     VI++ IL+                   G+C+ G +  A +F R ++ 
Sbjct: 67  LFQEML-DRRSHDVISFNILVT------------------GLCRAGKIETALEFFRKMDD 107

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           R C P+VI+Y++L+  L    +  +  +L+  M +RG  P+V+TY+IL+  LC++ K   
Sbjct: 108 R-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 166

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A +VLR   + G  P+  +Y+ L+   C+  R+  A+  +  M   GC P++V Y T++ 
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 226

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK G    A  +   + D G  P++  YN + + L  +     ++ ++   +S GI+P
Sbjct: 227 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 286

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TY+S+I  LCR   +DEA  LL+ ++S    P VI Y+ +I G CK  +++E+ ++ 
Sbjct: 287 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             M   GC  +  TY  LI+G+   G   EA  L   +V M
Sbjct: 347 EVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 250/473 (52%), Gaps = 18/473 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KFD  +   E M   G   +    + L+  F +  +   A+ V+  +
Sbjct: 83  EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKM 142

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EPD+   ++L++G+C   +I  A  ++D++   G+ PD VT+N +I  L      
Sbjct: 143 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 202

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + D+++   C+P + TY  ++      G  D A+ LL +M               
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK   +  AF     +E++G +PDV +YN L+  L N G+W +  +L+++MI R +
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVVT++ LI +  ++GK  +A  +     ++ + P+  +Y+ LI+ +C   RLD A +
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M+S  CLPD+V YNT++  FCK    ++ +E+F ++S  G   N  +YNT+   L+
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 442

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +GD   A  +  +M+S G+ PD ITY+ L+  LC+ G +++A+ +   ++ ++  P + 
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +YNI+I G CK  ++ +  ++  ++  KG KPN   Y  +I G    G + EA
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 218/452 (48%), Gaps = 19/452 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +  E++  ++ MV  G KPD V    LI   F   K+++AV +++ +   G +PD+F Y 
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +++G CK   I+LA  +L ++       +VV YN +I  LC    ++ AF +F+++   
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             KP V TY  LI                    +C  G    A + +  +  R   P+V+
Sbjct: 286 GIKPDVFTYNSLISC------------------LCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N L+      GK  E EKL  EMI R ++PN+VTY+ LI+  C   + ++A  +    
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             K   PD  +Y+ LI  +CK  R++  +E    M   G + + V YNT++    + G+ 
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D A +IF+K+   G PP++ +Y+ +   L   G   +AL +   +    +EP+  TYN +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  +C+ G V++   L   +     +P VI Y  +I GFC+     E+  +   M E G 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            P+   Y  LI      G +A + EL   + S
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRS 599



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 210/427 (49%), Gaps = 19/427 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL +    E K + AV +  E+++    P +  ++ L+S   K N+ ++   + +++++ 
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   +  TY+I++   C R  +  A  V  ++++   +P ++T + L+            
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN----------- 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C    + +A   V  +   G +PD +++N L+  L    K  E   L+  M
Sbjct: 160 -------GYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM 212

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           ++RG +P++ TY  +++ LC+ G  + A+ +L+  ++  +  +   Y+ +I   CK   +
Sbjct: 213 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHM 272

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A +  + M + G  PD+  YN++++  C  G    A  +   + +    PNV ++N++
Sbjct: 273 DDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSL 332

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             A    G  I A  +  EM+ + I+P+ +TYNSLI+  C    +DEA  +   M S   
Sbjct: 333 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V++YN +I GFCK +R+ E +E+   M ++G   N  TY  LI+G+   G    A +
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 496 LANALVS 502
           +   +VS
Sbjct: 453 IFKKMVS 459



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE+      MV+  C PDVV    LIK F + ++  + + +   + + G   +   YN
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G  +A   ++A K+  ++ S G  PD++TY+I++  LC  G +E A  VF+ L + 
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY I+I+                  GMCK G V   +    SL  +G +P+VI
Sbjct: 496 KMEPNIYTYNIMIE------------------GMCKAGKVEDGWDLFCSLSLKGVKPNVI 537

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            Y  ++      G  EE + L  EM   G  P+   Y+ LI +  RDG    + ++++  
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLD 316
           +  G   DA +   +I+    DGRL+
Sbjct: 598 RSCGFVGDASTISMVINML-HDGRLE 622



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+     P  I ++ L+S + +    D  + L   M++        +Y+I++ 
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  ++  ++ VL  M + G +P+  T   L+ G  +G   +EA+ L + +V M
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 260/514 (50%), Gaps = 58/514 (11%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G  D +L  + S       PDV +  +L++   +  +   A RV+E      E     Y 
Sbjct: 78  GDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARVVEACGP--EATAATYG 132

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           AL+ G+C+A  +E A +V+  + +   +     +N +I +LC RG +  A  V D +L  
Sbjct: 133 ALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCR 192

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C P V+TY IL+QA        +A++L+D M                  MC++G V QA
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + + SL SRGC+P+ ++YN +L+   ++ +W + ++++ EM+     PN  T +++I++
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LCR G  +     L    + G T +  +Y+ +IS  C+ G +D A+E L  M S GC PD
Sbjct: 313 LCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPD 372

Query: 334 IVNYNTILAA-----------------------------------FCKNGNADQALEIFE 358
           IV YNT+L                                     +C+ G   QA E+F+
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + GC PN ++Y+T+   L  +G   +AL +++EM +KG   D++ Y  L   L ++ 
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKED 491

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            ++E V ++  ++ +   P  + YN ++LG C+  + + +I+VLA M   GC P+E+TY+
Sbjct: 492 KIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYI 551

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
           +LIEG+ Y G+  EA EL + L S   +S    K
Sbjct: 552 ILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIK 585



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 206/403 (51%), Gaps = 19/403 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      G+  ++L  ++ M+  GC PDVV    L++   + R   +A+ +++ +   G
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG 228

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+   YN +I   C+   ++ A ++L+ L SRG  P+ V YN ++   CS      A 
Sbjct: 229 CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++ D+++R+NC P   T  ++I     +G   K    L++M                 GM
Sbjct: 289 EILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGM 348

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C++G V  A + + +++S GC+PD+++YN +L+ L +  +WE+ E+LM +M      P+ 
Sbjct: 349 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDN 408

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ +IS  C+ G    A +V +   EKG  P++ +Y  +I    K G+++ A+E L+ 
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M + G   D + Y  +  +  K    ++ +++  KL D G  P    YNT+   L  +G 
Sbjct: 469 MANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
              A+ ++++M+S G  PDE TY  LI  L  +G   EA  LL
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 207/430 (48%), Gaps = 21/430 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV   N L+   C+  +   A +V++   + G      TY  ++   C  G++E A +V
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +       +   +  LI A                  +C++G V  A   +  +  R
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHA------------------LCERGRVADALVVLDGMLCR 192

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC PDV++YN+LL+       + +  +L+  M + G EPN VTY+++I ++CR+G  + A
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            ++L +   +G  P+  +Y+ ++  +C   R   A E LD M+ + C P+    N I+  
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C+ G   +     EK+S  GC  NV +YN + S +   G+   AL ++S M S G +PD
Sbjct: 313 LCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPD 372

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TYN+++  LC     ++A  L++ M      P   ++N II  +C+   I ++ EV  
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            M EKGC PN TTY  +I G+   G   +A+EL N + +    +   ++ L  +    D 
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDK 492

Query: 524 YKEISHLATK 533
            +E+  +  K
Sbjct: 493 IEEVVQVVHK 502



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  +I    + G   ++    + M   GC P+    + +I    +  K  +A+ ++  
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +   G      Y  L     K ++IE   +V+ +L+  G SP  V YN ++  LC  G  
Sbjct: 469 MANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           + A  V   ++   C P   TY ILI+    EG + +A +LL  +
Sbjct: 529 DYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 256/497 (51%), Gaps = 50/497 (10%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
           +M+  GC+P VV  T L++   +     +A+ V++ +   G  P++  YN +I+G C+  
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +++ A ++L+RL S GF PD+V+Y  ++  LC+    +    +F +++   C P  +T+ 
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
           +L++     G  ++A+++L +M                  +CK+G V  A+ F+ ++   
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC PD ISY  +LR L   G+WE  ++L+ EM+ +   PN VT++  I  LC+ G  E A
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416

Query: 284 VDVLRAAKEKGLT--------------------------------PDAYSYDPLISAYCK 311
           + ++    E G +                                P+  +Y  L++  C 
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCH 476

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
             RLD A E L  MI   C  + V +N +++ FC+ G  ++A+E+  ++ + GC PN+ +
Sbjct: 477 AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 536

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           +NT+   +    +   AL ++  ++SKG+  D ITY+S++  L R+   +EA+ +L  ++
Sbjct: 537 FNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQ 596

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
               RP V  YN I+   CK    +++I+  A M   GC PNE+TY++LIEG+ + G   
Sbjct: 597 DMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLK 656

Query: 492 EAMELANALVSMHAISR 508
           EA  + + L +   +S+
Sbjct: 657 EARYVLSELYAKGVLSK 673


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 248/474 (52%), Gaps = 18/474 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KFD  +   E M   G   ++   + LI  F +  + + A+ V+  
Sbjct: 82  VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EPD+   N+L++GFC  N+I  A  ++ ++   G+ PD  T+N +I  L     
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + D+++   C+P ++TY I++      G  D A+ LL +M              
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C    V  A      ++++G +P+V++YN L+R L N G+W +  +L+++MI R 
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNVVT+S LI +  ++GK  +A  +     ++ + PD ++Y  LI+ +C   RLD A 
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + MIS  C P++V YNT++  FCK    D+ +E+F ++S  G   N  +Y T+    
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           + + +   A  +  +M+S G+ PD +TY+ L+  LC +G V+ A+ +   ++ ++  P +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            +YNI+I G CK  ++ +  ++  ++  KG KPN  TY  ++ G    G + EA
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 200/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   FR  +  E++  ++ MV  GC+PD+V    ++    +    + A+ +++ +E
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   EP V  YN +I   C    +  A  +   + ++G  P+VVTYN +I  LC+ G   
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P V+T++ LI A + EG+  +A KL DEM                
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A      + S+ C P+V++YN L++      + +EG +L  EM  RGL 
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            N VTY+ LI    +  + ++A  V +     G+ PD  +Y  L+   C +G+++ A+  
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            +Y+      PDI  YN ++   CK G  +   ++F  LS  G  PNV +Y TM S    
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            G K  A  +  EM  +G  PD  TYN+LI    RDG    +  L+ +M S RF
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 177/367 (48%), Gaps = 19/367 (5%)

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D ++SR F P +V ++ ++ ++      +    + +Q+        + TY+ILI      
Sbjct: 71  DMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC---- 125

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                          C++  +  A   +  +   G +PD+++ N LL    +  +  +  
Sbjct: 126 --------------FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            L+ +M+  G +P+  T++ LI  L R  +  +AV ++     KG  PD  +Y  +++  
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G +DLA+  L  M      P +V YNTI+ A C   N + AL +F ++ + G  PNV
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YN++   L + G    A  ++S+M+ + I P+ +T+++LI    ++G + EA  L  +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P + +Y+ +I GFC   R++E+  +   M  K C PN  TY  LI+G      
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411

Query: 490 RAEAMEL 496
             E MEL
Sbjct: 412 VDEGMEL 418



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 134/251 (53%), Gaps = 1/251 (0%)

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           LN  K ++   L  +M+     P++V +S L+S++ +  K +  + +    +  G++ + 
Sbjct: 57  LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           Y+Y  LI+ +C+  +L LA+  L  M+  G  PDIV  N++L  FC       A+ +  +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + ++G  P+  ++NT+   L+       A+ ++  M+ KG +PD +TY  +++ LC+ G 
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +D A+ LL  ME  +  P V+ YN II   C  + +N+++ +   M  KG +PN  TY  
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296

Query: 480 LIEGI-GYGGW 489
           LI  +  YG W
Sbjct: 297 LIRCLCNYGRW 307



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 20/266 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE+ +  E M++  C P+VV    LIK F + ++ ++ + +   + + G   +   Y 
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI GF +A + + A  V  ++ S G  PD++TY+I++  LC+ G +E+A  VF+ L R 
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY I+I+                  GMCK G V   +    SL  +G +P+V+
Sbjct: 496 KMEPDIYTYNIMIE------------------GMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  ++      G  EE + L  EM   G  P+  TY+ LI +  RDG    + +++R  
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLD 316
           +      DA S   L++    DGRLD
Sbjct: 598 RSCRFVGDA-STIGLVTNMLHDGRLD 622



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 95/185 (51%)

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           Y Y  +      D +LD A+     M+     P IV ++ +L+A  K    D  + + E+
Sbjct: 47  YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + ++G   N+ +Y+ + +          AL ++++M+  G EPD +T NSL++  C    
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + +AV L+  M    ++P   ++N +I G  +  R +E++ ++  M  KGC+P+  TY +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 480 LIEGI 484
           ++ G+
Sbjct: 227 VVNGL 231



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 59/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  +M+     P  + ++ L+S + +    D  + L   M++      + +Y+I+I 
Sbjct: 65  AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  +++ ++ VLA M + G +P+  T   L+ G  +G   ++A+ L   +V M
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 240/454 (52%), Gaps = 19/454 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+   I+ M      P+    T LI+   +  +  +A RV++ +   G  PDV 
Sbjct: 34  KKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVI 93

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN ++ GFCK  Q+  A  +L+ +   G  PDV+TYN +I SL   G  + A + +   
Sbjct: 94  TYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQ 153

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           LR  C P +I YTILI+       T +A+++L++M +                   GC P
Sbjct: 154 LRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAI------------------EGCYP 195

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+++YN L+      GK+E+   ++  ++S G+EPN +TY+ L+ SLC  G  ++  ++L
Sbjct: 196 DLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEIL 255

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K+    P   +Y+ LI+  CK G ++ AI F   M+S+ C PDI+ YNT+L A CK 
Sbjct: 256 AIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKE 315

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+AL++F  LSD  C P + +YNT+   L   G    AL + ++M+ KGI PD IT+
Sbjct: 316 GMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITH 375

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SL+   C    V++AV +L +M     R    +Y ++I G C+ +R++ +I+VL  M  
Sbjct: 376 RSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMIS 435

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              KP+E  Y  LI+ +   G   EA EL   L+
Sbjct: 436 GRYKPDEEIYSTLIKSVADAGMVEEADELHQKLI 469



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 157/293 (53%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CKKG + +A + +  +      P+      L+R L+ +G+ E   +++  M+  GL P+
Sbjct: 32  LCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPD 91

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+TY++++   C+  +   A+D+L      G  PD  +Y+ +I +   +G+ D A+EF  
Sbjct: 92  VITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWR 151

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             +  GCLP ++ Y  ++    K+    +ALE+ E ++  GC P++ +YN++ +     G
Sbjct: 152 GQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEG 211

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +I  +LS G+EP+ ITYNSL+  LC  G+ DE   +L  M+ T   PTV++YN
Sbjct: 212 KYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYN 271

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I+I G CK   +  +I     M  + C P+  TY  L+  +   G   EA+++
Sbjct: 272 ILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQV 324



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 54/357 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYF-----------------------------------IESMV 64
           +  +I+  F  GKFD+++ F                                   +E M 
Sbjct: 130 YNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMA 189

Query: 65  ANGCKPDVVMCTKLIKKFFQERK-SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIE 123
             GC PD+V    L+    +E K  + A+ +  IL    EP+   YN+L+   C     +
Sbjct: 190 IEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWD 249

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
             +++L  ++     P VVTYNI+I  LC  G++E A   F Q++ +NC P +ITY  L+
Sbjct: 250 EVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLL 309

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
            A                  +CK+GMV +A Q    L    C P +I+YN ++  L   G
Sbjct: 310 TA------------------LCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRG 351

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             +E  KL  +MI +G+ P+ +T+  L+   C   + EDAV++LR   ++    ++ +Y 
Sbjct: 352 YMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYR 411

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            +I+  C++ R+D+AI+ L+ MIS    PD   Y+T++ +    G  ++A E+ +KL
Sbjct: 412 LVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKL 468



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 54/333 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK-SNKAVRVMEIL 98
           +  LI+  ++      +L  +E M   GC PD+V    L+    +E K  + A+ +  IL
Sbjct: 165 YTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNIL 224

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               EP+   YN+L+   C     +  +++L  ++     P VVTYNI+I  LC  G++E
Sbjct: 225 SHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVE 284

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A   F Q++ +NC P +ITY  L+ A                  +CK+GMV +A Q   
Sbjct: 285 RAINFFVQMVSENCSPDIITYNTLLTA------------------LCKEGMVDEALQVFV 326

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT------------ 266
            L    C P +I+YN ++  L   G  +E  KL  +MI +G+ P+ +T            
Sbjct: 327 LLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWID 386

Query: 267 -----------------------YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
                                  Y ++I+ LCR+ + + A+ VL         PD   Y 
Sbjct: 387 QVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYS 446

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            LI +    G ++ A E    +I    L  I++
Sbjct: 447 TLIKSVADAGMVEEADELHQKLIERKVLRTILD 479


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 257/512 (50%), Gaps = 54/512 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R G F  ++  +E + A GC  DV  C  ++     +   ++A+ ++  L 
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 219

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G EPDV +YNA++ G C A +     ++++ +      P++VT+N +I  LC  G+ E
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q++   C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 280 RVHEVLAQMVEHGCTPDIRMYATIID------------------GICKEGHLEVAHEILN 321

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S G +P+V+ YN LL+ L +  +WEE E+L+ EM  +    + VT++IL+   C++G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY- 337
             +  +++L    E+G  PD  +Y  +I+ +CK+G +D A+  L  M + GC P+ ++Y 
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 338 ----------------------------------NTILAAFCKNGNADQALEIFEKLSDV 363
                                             NT++   CK G  +QA+E+ +++   
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KG+ P+ I Y+S+ S L R+G +++ 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK      +IE LA M   GC PNE+TY +LI G
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRLN 515
           +   G+  EA E+   L S  A+ +   K   
Sbjct: 622 LASEGFVKEAQEMLTELCSKGALRKHLMKHFG 653



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 228/446 (51%), Gaps = 55/446 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNA+++G+C+A Q+E A ++   +      P+  TY  ++ +LC+RG I  A  V D++ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R  C P    Y ++++A    G    A+++L+++                  +C +G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +R L S GC+PDV+SYN +L+ L    +W   ++LM EM+     PN+VT++ LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P++V YNT+L   C     ++  E+  ++ D  CP +  ++N +      +G   R + +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + +ML +G  PD ITY ++I+  C++G++DEAV LL  M +   +P  ISY I++ G C 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 452 TRR-----------------------------------INESIEVLAAMFEKGCKPNETT 476
             R                                   + ++IE+L  M   GC P+  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           Y  +I+G+G  G   EA+EL N +V+
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVN 535



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAV-----------------------------DVLRA 289
           G E   V  S LI SLC  G+T +A                                 R 
Sbjct: 53  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL 112

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
           A    + P+AY+Y P++ A C  GR+  A+  LD M   GC P    Y+ IL A C+ G 
Sbjct: 113 AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGG 172

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A+ + E L   GC  +V + N + +A+   G    AL ++ ++ S G EPD ++YN+
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 232

Query: 410 LISCLC---RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           ++  LC   R G V E   L+ +M      P ++++N +I   C+        EVLA M 
Sbjct: 233 VLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 289

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E GC P+   Y  +I+GI   G    A E+ N + S
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 254/473 (53%), Gaps = 18/473 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KFD  +   E M   G   +    + LI  F +  +   A+ V+  +
Sbjct: 83  EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP++   ++L++G+C + +I  A  ++D++   G+ P+ VT+N +I  L      
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + D+++   C+P ++TY +++      G TD A  LL++M               
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK   +  A    + +E++G +P+V++Y+ L+  L N G+W +  +L+++MI R +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+V T+S LI +  ++GK  +A  +     ++ + P   +Y  LI+ +C   RLD A +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             ++M+S  C PD+V YNT++  FCK    ++ +E+F ++S  G   N  +YN +   L+
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +GD   A  +  EM+S G+ P+ +TYN+L+  LC++G +++A+ +   ++ ++  PT+ 
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +YNI+I G CK  ++ +  ++   +  KG KP+   Y  +I G    G + EA
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 217/451 (48%), Gaps = 19/451 (4%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
           T+ S +N   + + R+S +        +  +      F  LI   F   K  E++  I+ 
Sbjct: 153 TLSSLLNGYCHSK-RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           MVA GC+PD+V    ++    +   ++ A  ++  +E+   EP V  YN +I G CK   
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A  +   + ++G  P+VVTY+ +I  LC+ G    A ++   ++     P V T++ 
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI A + EG+  +A KL DEM                 G C    + +A Q    + S+ 
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PDV++YN L++      + EEG ++  EM  RGL  N VTY+ILI  L + G  + A 
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++ +     G+ P+  +Y+ L+   CK+G+L+ A+   +Y+      P I  YN ++   
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G  +   ++F  LS  G  P+V +YNTM S     G K  A  +  EM   G  P+ 
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             YN+LI    RDG  + +  L+ +M S  F
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGF 602



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 211/427 (49%), Gaps = 19/427 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL +    E K + AV +  E+++    P +  ++ L+S   K N+ ++   + +++++ 
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   +  TY+I+I   C R  +  A  V  ++++   +P ++T + L+            
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN----------- 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C    + +A   V  +   G QP+ +++N L+  L    K  E   L+  M
Sbjct: 160 -------GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +++G +P++VTY ++++ LC+ G T+ A ++L   ++  L P    Y+ +I   CK   +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+     M + G  P++V Y+++++  C  G    A  +   + +    P+V +++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             A    G  + A  +  EM+ + I+P  +TY+SLI+  C    +DEA  +   M S   
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V++YN +I GFCK +R+ E +EV   M ++G   N  TY +LI+G+   G    A E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452

Query: 496 LANALVS 502
           +   +VS
Sbjct: 453 IFKEMVS 459



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 178/381 (46%), Gaps = 26/381 (6%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  +F ++++    P++I ++ L+ A     + D  + L ++M              
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-------------- 107

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               ++ G   +  +Y++L+       +      ++ +M+  G EPN+VT S L++  C 
Sbjct: 108 ----QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  +AV ++      G  P+  +++ LI       +   A+  +D M++ GC PD+V 
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++   CK G+ D A  +  K+      P V  YNT+   L        AL +  EM 
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           +KGI P+ +TY+SLISCLC  G   +A  LL DM   +  P V +++ +I  F K  ++ 
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH----AISRDT-- 510
           E+ ++   M ++   P+  TY  LI G        EA ++   +VS H     ++ +T  
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 511 --FKRLNRTFPLLDVYKEISH 529
             F +  R    ++V++E+S 
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQ 424


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 256/511 (50%), Gaps = 54/511 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R G F  ++  +E + A GC  DV  C  ++     +   ++A+ ++  L 
Sbjct: 197 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 256

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G EPDV +YNA++ G C A +     ++++ +      P++VT+N +I  LC  G+ E
Sbjct: 257 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 316

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q++   C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 317 RVHEVLAQMVEHGCTPDIRMYATIID------------------GICKEGHLEVAHEILN 358

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S G +P+V+ YN LL+ L +  +WEE E+L+ EM  +    + VT++IL+   C++G
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY- 337
             +  +++L    E G  PD  +Y  +I+ +CK+G +D A+  L  M + GC P+ ++Y 
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478

Query: 338 ----------------------------------NTILAAFCKNGNADQALEIFEKLSDV 363
                                             NT++   CK G  +QA+E+ +++   
Sbjct: 479 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KG+ P+ I Y+S+ S L R+G +++ 
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK      +IE LA M   GC PNE+TY +LI G
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           +   G+  EA E+   L S  A+ +   K  
Sbjct: 659 LASEGFVKEAQEMLTELCSKGALRKHLMKHF 689



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 227/446 (50%), Gaps = 55/446 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNA+++G+C+A Q+E A ++   +      P+  TY  ++ +LC+RG I  A  V D++ 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R  C P    Y ++++A    G    A+++L+++                  +C +G V 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +R L S GC+PDV+SYN +L+ L    +W   ++LM EM+     PN+VT++ LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S G  
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P++V YNT+L   C     ++  E+  ++ D  CP +  ++N +      +G   R + +
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + +ML  G  PD ITY ++I+  C++G++DEAV LL  M +   +P  ISY I++ G C 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 452 TRR-----------------------------------INESIEVLAAMFEKGCKPNETT 476
             R                                   + ++IE+L  M   GC P+  +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           Y  +I+G+G  G   EA+EL N +V+
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVN 572



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAV-----------------------------DVLRA 289
           G E   V  S LI SLC  G+T +A                                 R 
Sbjct: 90  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL 149

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
           A    + P+AY+Y P++ A C  GR+  A+  LD M   GC P    Y+ IL A C+ G 
Sbjct: 150 AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGG 209

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A+ + E L   GC  +V + N + +A+   G    AL ++ ++ S G EPD ++YN+
Sbjct: 210 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 269

Query: 410 LISCLC---RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           ++  LC   R G V E   L+ +M      P ++++N +I   C+        EVLA M 
Sbjct: 270 VLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 326

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E GC P+   Y  +I+GI   G    A E+ N + S
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 233/436 (53%), Gaps = 25/436 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFA 108
           +GK++E+   +E M+   C PDVV    L+  F +  K ++A R++E ++ +   P V  
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI GF +A+++  A +V++ +   G SPD+VTYN ++  LC  G +E A ++ + ++
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
             +C P V+TY+IL+                   G+CK G V  A   +  +  RGCQP+
Sbjct: 365 EKDCAPDVVTYSILVN------------------GLCKLGKVDDARLLLEMMLERGCQPN 406

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           ++++N ++      GK +EG K++  M      P+VVTYS LI   C+  + +DA  +L 
Sbjct: 407 LVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL- 465

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G++PD  SY  ++   C  G+++ A E +D M   GC P   +Y  I+   C   
Sbjct: 466 -----GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVE 520

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+AL++ + +S+ GC PN+ +Y+ + + L  +     A+ ++  ML KG  PD  TY 
Sbjct: 521 RGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYT 580

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI   C+   +D A      M  +   P  ++YNI+I GFC++  + ++IEV+  M EK
Sbjct: 581 SLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640

Query: 469 GCKPNETTYVLLIEGI 484
           GC P+  TY  L+  +
Sbjct: 641 GCNPDAATYFSLMRSL 656



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 254/506 (50%), Gaps = 47/506 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK D +   ++ M+   C PDV+  T LI    Q    ++A ++ME +++ G
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD  AYNAL++G CK NQ+E  +K+L+ +   G  PD  +YN ++  LC  G  E A 
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+ ++++   C P V+TY  L+       + D+A +LL++M                 G 
Sbjct: 253 KILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF 312

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            +   +  A++ +  +   G  PD+++YN LL  L   GK EE  +L+  M+ +   P+V
Sbjct: 313 SRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDV 372

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTYSIL++ LC+ GK +DA  +L    E+G  P+  +++ +I  +CK G++D   + L+ 
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432

Query: 325 MISDGCLPDIVNYNTILAAFCK-----------------------------NGNADQALE 355
           M    C PD+V Y+T++  +CK                              G  ++A E
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQE 492

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + + ++  GCPP  S Y  +   L        AL M+  M  +G EP+  TY+ LI+ LC
Sbjct: 493 VMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +   V++A+ +L  M      P V +Y  +I GFCK  +++ + +    M + GC+P++ 
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
            Y +LI G    G   +A+E+   ++
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLML 638



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 222/425 (52%), Gaps = 32/425 (7%)

Query: 82  FFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
           FF+ER S+ +           +P    Y ALI+GF +A   ++  ++ + + +R FSPDV
Sbjct: 11  FFRERFSDPS-----------KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDV 59

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           +T+N ++ + C  G ++ A   F   +   C PT  TY ILI       + D+A +LLDE
Sbjct: 60  ITHNTILKAYCQIGDLDRALSHFRGKMW--CSPTAFTYCILIHGLCQCQRIDEAYQLLDE 117

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK G +  A   ++ +  R C PDVI+Y  L+        
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            +E  KLM +M   GL P+ V Y+ L++ LC+  + E+   +L    E G  PD +SY+ 
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++  C+ G+ + A + L+ MI   C PD+V YN+++  FCK    D+A  + E +    
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 365 CPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           C P V +Y T+    +S  D++  A  ++ +M   GI PD +TYN L+  LC+ G ++EA
Sbjct: 298 CAPTVITYTTLIGG-FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             LL  M      P V++Y+I++ G CK  +++++  +L  M E+GC+PN  T+  +I+G
Sbjct: 357 HELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416

Query: 484 IGYGG 488
               G
Sbjct: 417 FCKAG 421



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 221/446 (49%), Gaps = 19/446 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + +  LI    RAG     L     M+A    PDV+    ++K + Q    ++A+     
Sbjct: 25  STYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG 84

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + +  P  F Y  LI G C+  +I+ A ++LD +  +   PD   YN +I  LC  G I
Sbjct: 85  -KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A  V   +L  +C P VITYT LI                  +G C+   + +A + +
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLI------------------VGCCQTNALDEARKLM 185

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             ++  G  PD ++YN LL  L    + EE  KL+ EM+  G EP+  +Y+ +++ LC  
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK E+A  +L    EK   PD  +Y+ L+  +CK  ++D A   L+ M+   C P ++ Y
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++  F +      A  + E +   G  P++ +YN +   L  +G    A  ++  M+ 
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           K   PD +TY+ L++ LC+ G VD+A  LL  M     +P ++++N +I GFCK  +++E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
             +VL  M E  C P+  TY  LI+G
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDG 451



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 203/384 (52%), Gaps = 24/384 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  K DE+   +E MV   C P V+  T LI  F +  +   A RVME + K G  PD+ 
Sbjct: 279 KVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLV 338

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+ G CKA ++E A+++L+ +  +  +PDVVTY+I++  LC  G ++ A  + + +
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C+P ++T+  +I      G+ D+  K+L+ M                 G CK   +
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRM 458

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF  +      G  PD  SY+ +L  L + GK EE +++M  M  +G  P    Y+++
Sbjct: 459 QDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI 512

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC   + ++A+ +L+   E+G  P+ Y+Y  LI+  CK  R++ AI  LD M+  GC
Sbjct: 513 IGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGC 572

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD+  Y +++  FCK    D A + F+ + D GC P+  +YN + S    SG+  +A+ 
Sbjct: 573 VPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIE 632

Query: 391 MISEMLSKGIEPDEITYNSLISCL 414
           ++  ML KG  PD  TY SL+  L
Sbjct: 633 VMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 20/363 (5%)

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P   TY  +I      G  +   ++ +++L     P VIT+  +++A             
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKA------------- 68

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                 C+ G + +A    R      C P   +Y +L+  L    + +E  +L+ EMI +
Sbjct: 69  -----YCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              P+   Y+ LI+ LC+ GK + A +VL+   E+   PD  +Y  LI   C+   LD A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            + ++ M   G  PD V YN +L   CK    ++  ++ E++ + G  P+  SYNT+ + 
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG    A  ++ +M+ K   PD +TYNSL+   C+   +DEA  LL DM   R  PT
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           VI+Y  +I GF +  R+ ++  V+  MF+ G  P+  TY  L++G+   G   EA EL  
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361

Query: 499 ALV 501
            +V
Sbjct: 362 VMV 364



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 33/315 (10%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV------ 265
           + + F R   S   +P   +Y  L+      G  +   ++  EM++R   P+V+      
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 266 ---------------------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
                                      TY ILI  LC+  + ++A  +L    +K   PD
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           A  Y+ LI+  CK G++D A   L  M+   C+PD++ Y +++   C+    D+A ++ E
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLME 186

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+ + G  P+  +YN + + L           ++ EM+  G EPD  +YN++++CLC  G
Sbjct: 187 KMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESG 246

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
             +EA  +L  M   +  P V++YN ++ GFCK  +++E+  +L  M  + C P   TY 
Sbjct: 247 KYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYT 306

Query: 479 LLIEGIGYGGWRAEA 493
            LI G       A+A
Sbjct: 307 TLIGGFSRADRLADA 321



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 19/211 (9%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           +L     +  +  +++     GK +E+   ++ M   GC P       +I       + +
Sbjct: 464 ILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGD 523

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +A+++++++ + G EP+++ Y+ LI+G CK  ++E A  VLD +  +G  PDV TY  +I
Sbjct: 524 EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLI 583

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
              C    +++A++ F  +    C+P  + Y ILI                   G C+ G
Sbjct: 584 DGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILIS------------------GFCQSG 625

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            V +A + ++ +  +GC PD  +Y  L+R+L
Sbjct: 626 NVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 1/137 (0%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYGEPDVFAYNAL 112
           DE+L  ++ M   GC+P++   + LI    + ++   A+ V+++ LEK   PDV  Y +L
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I GFCK N+++ A +    +R  G  PD + YNI+I   C  G +E A +V   +L   C
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGC 642

Query: 173 KPTVITYTILIQATMLE 189
            P   TY  L+++   E
Sbjct: 643 NPDAATYFSLMRSLTTE 659


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 254/473 (53%), Gaps = 18/473 (3%)

Query: 39   QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
            +F KL+    +  KFD  +   E M   G   +    + LI  F +  +   A+ V+  +
Sbjct: 697  EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 756

Query: 99   EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             K G EP++   ++L++G+C + +I  A  ++D++   G+ P+ VT+N +I  L      
Sbjct: 757  MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816

Query: 158  ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
              A  + D+++   C+P ++TY +++      G TD A  LL++M               
Sbjct: 817  SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876

Query: 203  --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              G+CK   +  A    + +E++G +P+V++Y+ L+  L N G+W +  +L+++MI R +
Sbjct: 877  IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936

Query: 261  EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             P+V T+S LI +  ++GK  +A  +     ++ + P   +Y  LI+ +C   RLD A +
Sbjct: 937  NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996

Query: 321  FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
              ++M+S  C PD+V YNT++  FCK    ++ +E+F ++S  G   N  +YN +   L+
Sbjct: 997  MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056

Query: 381  SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             +GD   A  +  EM+S G+ P+ +TYN+L+  LC++G +++A+ +   ++ ++  PT+ 
Sbjct: 1057 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116

Query: 441  SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            +YNI+I G CK  ++ +  ++   +  KG KP+   Y  +I G    G + EA
Sbjct: 1117 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 242/473 (51%), Gaps = 23/473 (4%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R ++ +   D++E    +L K   R  K ++++     MV +   P +V   +L+    +
Sbjct: 145 RASSSVSGGDLRE----RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK 200

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            +K +  + + + +E  G   D++ +N +I+ FC   Q+ LA  +L ++   G+ PD VT
Sbjct: 201 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 260

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
              ++   C R  +  A  + D+++    KP ++ Y  +I +                  
Sbjct: 261 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS------------------ 302

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK   V  AF F + +E +G +P+V++Y  L+  L N  +W +  +L+++MI + + PN
Sbjct: 303 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 362

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+TYS L+ +  ++GK  +A ++        + PD  +Y  LI+  C   R+D A +  D
Sbjct: 363 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 422

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+S GCL D+V+YNT++  FCK    +  +++F ++S  G   N  +YNT+    + +G
Sbjct: 423 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 482

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           D  +A    S+M   GI PD  TYN L+  LC +G +++A+ +  DM+       +++Y 
Sbjct: 483 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 542

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +I G CKT ++ E+  +  ++  KG KP+  TY  ++ G+   G   E   L
Sbjct: 543 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 217/451 (48%), Gaps = 19/451 (4%)

Query: 3    TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
            T+ S +N   + + R+S +        +  +      F  LI   F   K  E++  I+ 
Sbjct: 767  TLSSLLNGYCHSK-RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 825

Query: 63   MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
            MVA GC+PD+V    ++    +   ++ A  ++  +E+   EP V  YN +I G CK   
Sbjct: 826  MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 885

Query: 122  IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
            ++ A  +   + ++G  P+VVTY+ +I  LC+ G    A ++   ++     P V T++ 
Sbjct: 886  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 945

Query: 182  LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
            LI A + EG+  +A KL DEM                 G C    + +A Q    + S+ 
Sbjct: 946  LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 1005

Query: 225  CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            C PDV++YN L++      + EEG ++  EM  RGL  N VTY+ILI  L + G  + A 
Sbjct: 1006 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 1065

Query: 285  DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            ++ +     G+ P+  +Y+ L+   CK+G+L+ A+   +Y+      P I  YN ++   
Sbjct: 1066 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125

Query: 345  CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            CK G  +   ++F  LS  G  P+V +YNTM S     G K  A  +  EM   G  P+ 
Sbjct: 1126 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185

Query: 405  ITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              YN+LI    RDG  + +  L+ +M S  F
Sbjct: 1186 GCYNTLIRARLRDGDREASAELIKEMRSCGF 1216



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 227/459 (49%), Gaps = 26/459 (5%)

Query: 19  SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKL 78
           S   ++RP   ++ F+       +L+    +  K+D  +   + M   G + D+     +
Sbjct: 177 SDMVKSRPFPSIVDFN-------RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 229

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I  F    + + A+ ++  + K G EPD     +L++GFC+ N++  A  ++D++   G+
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            PD+V YN +I SLC    +  AF  F ++ R   +P V+TYT L+              
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN------------- 336

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A + +  +  +   P+VI+Y+ LL   +  GK  E ++L  EM+ 
Sbjct: 337 -----GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 391

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
             ++P++VTYS LI+ LC   + ++A  +      KG   D  SY+ LI+ +CK  R++ 
Sbjct: 392 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 451

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            ++    M   G + + V YNT++  F + G+ D+A E F ++   G  P++ +YN +  
Sbjct: 452 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 511

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G+  +AL +  +M  + ++ D +TY ++I  +C+ G V+EA  L   +     +P
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 571

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            +++Y  ++ G C    ++E   +   M ++G   N+ T
Sbjct: 572 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 211/427 (49%), Gaps = 19/427 (4%)

Query: 77   KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            KL +    E K + AV +  E+++    P +  ++ L+S   K N+ ++   + +++++ 
Sbjct: 665  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 724

Query: 136  GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
            G   +  TY+I+I   C R  +  A  V  ++++   +P ++T + L+            
Sbjct: 725  GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN----------- 773

Query: 196  MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   G C    + +A   V  +   G QP+ +++N L+  L    K  E   L+  M
Sbjct: 774  -------GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826

Query: 256  ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            +++G +P++VTY ++++ LC+ G T+ A ++L   ++  L P    Y+ +I   CK   +
Sbjct: 827  VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 886

Query: 316  DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
            D A+     M + G  P++V Y+++++  C  G    A  +   + +    P+V +++ +
Sbjct: 887  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946

Query: 376  FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              A    G  + A  +  EM+ + I+P  +TY+SLI+  C    +DEA  +   M S   
Sbjct: 947  IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006

Query: 436  RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
             P V++YN +I GFCK +R+ E +EV   M ++G   N  TY +LI+G+   G    A E
Sbjct: 1007 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 1066

Query: 496  LANALVS 502
            +   +VS
Sbjct: 1067 IFKEMVS 1073



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 245/570 (42%), Gaps = 109/570 (19%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +S D     +  LI       + DE+    + MV+ GC  DVV    LI  F + ++   
Sbjct: 392 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 451

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            +++   + + G   +   YN LI GF +A  ++ A +   ++   G SPD+ TYNI++G
Sbjct: 452 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 511

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G +E A  +F+ + +      ++TYT +I+                  GMCK G 
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR------------------GMCKTGK 553

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS- 268
           V +A+    SL  +G +PD+++Y  ++  L   G   E E L T+M   GL  N  T S 
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613

Query: 269 --ILIS--------------SLCRD---GKTEDAVDVLRAAKEK------------GLT- 296
             I +S              SL +D   G  + A+ +LRA   K            GL+ 
Sbjct: 614 GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSE 673

Query: 297 -------------------PDAYSYDPLISAYCKDGRLDLAIEF---------------- 321
                              P    +  L+SA  K  + D+ I                  
Sbjct: 674 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733

Query: 322 -------------------LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
                              L  M+  G  P+IV  +++L  +C +    +A+ + +++  
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  PN  ++NT+   L+       A+ +I  M++KG +PD +TY  +++ LC+ G  D 
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  LL  ME  +  P V+ YN II G CK + +++++ +   M  KG +PN  TY  LI 
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 483 GI-GYGGWRAEAMELANALVSMHAISRDTF 511
            +  YG W ++A  L + ++    I+ D F
Sbjct: 914 CLCNYGRW-SDASRLLSDMIE-RKINPDVF 941



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 246/566 (43%), Gaps = 80/566 (14%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            LI+  F+AG  D++  F   M   G  PD+     L+       +  KA+ + E ++K  
Sbjct: 474  LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             + D+  Y  +I G CK  ++E A  +   L  +G  PD+VTY  M+  LC++G++    
Sbjct: 534  MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593

Query: 162  KVFDQ-----LLRDNCKPTVITYTI---LIQATMLEGQTDKAMKLLDEMGMCKKGMV--- 210
             ++ +     L++++C  +    T+   LI+  +  G     +K + + G+CKK +    
Sbjct: 594  ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDI-KSGVCKKALSLLR 652

Query: 211  ----GQAFQFVRSLESRGCQ--------------------PDVISYNMLLRTLLNMGKWE 246
                  ++ +   L   G                      P +I ++ LL  +  M K++
Sbjct: 653  AFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD 712

Query: 247  EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
                L  +M + G+  N  TYSILI+  CR  +   A+ VL    + G  P+  +   L+
Sbjct: 713  VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 772

Query: 307  SAYCKDGRLDLAIEF-----------------------------------LDYMISDGCL 331
            + YC   R+  A+                                     +D M++ GC 
Sbjct: 773  NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 832

Query: 332  PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            PD+V Y  ++   CK G+ D A  +  K+      P V  YNT+   L        AL +
Sbjct: 833  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892

Query: 392  ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              EM +KGI P+ +TY+SLISCLC  G   +A  LL DM   +  P V +++ +I  F K
Sbjct: 893  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 452  TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH----AIS 507
              ++ E+ ++   M ++   P+  TY  LI G        EA ++   +VS H     ++
Sbjct: 953  EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012

Query: 508  RDT----FKRLNRTFPLLDVYKEISH 529
             +T    F +  R    ++V++E+S 
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQ 1038



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 135/268 (50%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L +T L   K  +   L ++M+     P++V ++ L+S++ +  K +  + + +  +  G
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +  D Y+++ +I+ +C   ++ LA+  L  M+  G  PD V   +++  FC+      A+
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +K+ ++G  P++ +YN +  +L  +     A     E+  KGI P+ +TY +L++ L
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C      +A  LL DM   +  P VI+Y+ ++  F K  ++ E+ E+   M      P+ 
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
            TY  LI G+       EA ++ + +VS
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVS 426



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD K  DA+D+     +    P    ++ L+SA  K  + D+ I     M   G   D+ 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++  FC       AL I  K+  +G  P+  +  ++ +          A+ ++ +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G +PD + YN++I  LC+   V++A     ++E    RP V++Y  ++ G C + R 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +++  +L+ M +K   PN  TY  L++     G   EA EL   +V M
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 246/466 (52%), Gaps = 21/466 (4%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  LI    RAG    +   ++ M  +G   +V++   +IK     RK + A+ + + +E
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939

Query: 100  KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G   PDVF Y+ ++    K+ +++ A ++++ + S+G SP+VVTY+ ++  LC  G +
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 158  ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            + A  +  ++ R  C P ++TY  +I                   G CK G + +A+  +
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIID------------------GHCKLGRIDEAYHLL 1041

Query: 218  RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
              +   GCQP+V++Y +LL      GK E+   L+  M+ +G  PN+ TY+ L+   C+ 
Sbjct: 1042 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKK 1101

Query: 278  GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
             + E A  +L +  +KG  P+  SY+ +I+  CK  ++   +  L+ M+S+ C+PDIV +
Sbjct: 1102 DEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 1161

Query: 338  NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            NTI+ A CK    D A E+F  + + GC PN+ +YN++   L  S    +A  ++ EM  
Sbjct: 1162 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 1221

Query: 398  K-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            K G  PD ITYN++I  LC+   VD A  L + M S    P  ++Y+I+I   CK R ++
Sbjct: 1222 KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 1281

Query: 457  ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E+  VL  M + G  P   TY  LI+G    G   +A+E+   L+S
Sbjct: 1282 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 239/449 (53%), Gaps = 20/449 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D  L+F E  ++  C PD V    +I    +  + + A+R++E +   G  P+VF+YN +
Sbjct: 214 DAVLHFRE--MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTV 271

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + GFCKAN++E A  +L+++ +RG  PDVV+Y  +I  LC    ++ A +V D++++  C
Sbjct: 272 LHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 331

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQ 215
           +P VITY  L+      G  D A++L+ +M                   C++  + +A Q
Sbjct: 332 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQ 391

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            ++ +   GC PD I+Y+ ++      GK  E   L+ +MI RG  P+V   S LI +LC
Sbjct: 392 VLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC 451

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +    + A ++LR +      PD  +Y  LI A CK  RL  A  +LD M+ + C PD+V
Sbjct: 452 KAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVV 511

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN+++   CK+   + A  +F+++   G  P+V +Y+ +  +     +   A  M+  M
Sbjct: 512 TYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM 571

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
                 PD +TY++LI+ LC+ G VD+A  +  +M      P +++YN +I G CK  ++
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++ E+L  M ++ C P+  TY  LI G+
Sbjct: 632 EQAAEMLEIMRKQSCTPDSITYTCLINGL 660



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 246/462 (53%), Gaps = 21/462 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEK 100
            +IK    A K D +L   + M  +G C PDV   + ++    +  K + A R++E ++ K
Sbjct: 918  VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK 977

Query: 101  YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
               P+V  Y++L+ G CKA +++ A  +L R+   G SP++VTYN +I   C  G I+ A
Sbjct: 978  GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 1037

Query: 161  FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            + + ++++   C+P V+TYT+L+ A                   CK G    A   V  +
Sbjct: 1038 YHLLEEMVDGGCQPNVVTYTVLLDA------------------FCKCGKAEDAIGLVEVM 1079

Query: 221  ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              +G  P++ +YN LL       + E   +L++ MI +G  PNVV+Y+ +I+ LC+  K 
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 281  EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
             + V +L         PD  +++ +I A CK  R+D+A E  + +   GC P++V YN++
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 341  LAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
            +   CK+   DQA  +  +++   GC P++ +YNT+   L  S    RA  +  +MLS G
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259

Query: 400  IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            + PD++TY+ +IS LC+   +DEA  +L  M    F P  I+Y  +I GFCKT  +++++
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319

Query: 460  EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E+L  +  KG  P+  T+ + I+ +   G   +A EL   ++
Sbjct: 1320 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 1361



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 228/437 (52%), Gaps = 19/437 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +A + + +L+ +E MV  GC PDVV  T +I    +  + ++A RVM+ ++++  +P+V 
Sbjct: 277 KANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 336

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L+ GFC+   ++ A +++ ++  RG+ P+ +TYN ++   C R  +E A +V   +
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           ++  C P  I Y+ +I                   G CK G + +A   +  +  RGC+P
Sbjct: 397 IQTGCPPDAINYSTIIS------------------GFCKAGKLREAHDLLEQMIRRGCRP 438

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV   + L+  L      +  ++L+   I     P+VV YSILI +LC+  +  +A   L
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +    PD  +Y+ ++   CK  R++ A    D M + G +PD+V Y+ ++ +FCK+
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            N D A ++ E++ +  C P+V +Y+ + + L  +G   +A  +  EML  G  P+ +TY
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI  LC+   V++A  +L  M      P  I+Y  +I G C   R+ E+  VL  M +
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678

Query: 468 KGCKPNETTYVLLIEGI 484
           KGC P+  TY  L+  +
Sbjct: 679 KGCLPDRMTYGTLLRAL 695



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 226/457 (49%), Gaps = 18/457 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    RAGK   +    + M   G K    +   +++      + + AV     + 
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS 223

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K   PD   YN +I+G  K+++++ A ++L+ +   GF+P+V +YN ++   C    +E+
Sbjct: 224 KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVEN 283

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  + +Q++   C P V++YT +I                   G+CK   V +A + +  
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVIN------------------GLCKLDQVDEACRVMDK 325

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  RGCQP+VI+Y  L+     +G  +   +L+ +M  RG  PN +TY+ ++   CR   
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRND 385

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E A  VL+   + G  PDA +Y  +IS +CK G+L  A + L+ MI  GC PD+   +T
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ A CK    D A E+      + C P+V +Y+ +  AL  +     A   +  M+   
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             PD +TYNS++  LC+   +++A  L   M +    P V++Y+I+I  FCK   ++ + 
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++L  M E  C P+  TY  LI G+   G   +A ++
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDV 602



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 227/429 (52%), Gaps = 21/429 (4%)

Query: 58   YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFC 117
            +F  +    G   D   C  L++   + ++   A++V    +    P++F +  LI G C
Sbjct: 830  FFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN-KLCCSPNMFTFTILIHGLC 888

Query: 118  KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTV 176
            +A  I  A ++L  +   G   +V+ +N++I  LCS   ++SA ++F ++    +C P V
Sbjct: 889  RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV 948

Query: 177  ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
             TY+ ++ + +  G+ D A +L+++M                   S+GC P+V++Y+ LL
Sbjct: 949  FTYSTIVDSLVKSGKVDDACRLVEDM------------------VSKGCSPNVVTYSSLL 990

Query: 237  RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
              L   GK +E   L+  M   G  PN+VTY+ +I   C+ G+ ++A  +L    + G  
Sbjct: 991  HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050

Query: 297  PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
            P+  +Y  L+ A+CK G+ + AI  ++ M+  G +P++  YN++L  FCK    ++A ++
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 357  FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
               +   GC PNV SYNT+ + L  +      + ++ +MLS    PD +T+N++I  +C+
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 417  DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK-GCKPNET 475
               VD A  L   ++ +   P +++YN ++ G CK+RR +++  +L  M  K GC P+  
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 476  TYVLLIEGI 484
            TY  +I+G+
Sbjct: 1231 TYNTVIDGL 1239



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 229/460 (49%), Gaps = 23/460 (5%)

Query: 42  KLIKRSFRAGKFDESLYFIE-SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LE 99
           K+++R    G    +L F E +   +G + ++  C  L+    +  + ++A  +    +E
Sbjct: 98  KVLQRLIDPGA---ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIE 154

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                D   Y+ LISGF +A +I  A ++ D +  +G       +  ++  LC  G    
Sbjct: 155 GQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSD 214

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A   F ++ +  C P  +TY  +I       + D A++LL+EM                 
Sbjct: 215 AVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 273

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G CK   V  A   +  + +RGC PDV+SY  ++  L  + + +E  ++M +MI RG +P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+TY  L+   CR G  + AV+++R   E+G  P+A +Y+ ++  +C+   ++ A + L
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             MI  GC PD +NY+TI++ FCK G   +A ++ E++   GC P+V+  +T+  AL  +
Sbjct: 394 QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                A  ++   +     PD + Y+ LI  LC+   + EA   L  M   R  P V++Y
Sbjct: 454 AAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTY 513

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           N ++ G CK+RRIN++  +   M   G  P+  TY ++I 
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 32/440 (7%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
            +  +I    + G+ DE+ + +E MV  GC+P+VV  T L+  F +  K+  A+ ++E++ 
Sbjct: 1021 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            EK   P++F YN+L+  FCK +++E A ++L  +  +G  P+VV+YN +I  LC    + 
Sbjct: 1081 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 1140

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
                + +Q+L +NC P ++T+  +I A     + D A +L + +                
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200

Query: 203  -GMCKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK     QA   +R +   +GC PD+I+YN ++  L    + +   KL  +M+S GL
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 261  EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             P+ VTYSI+ISSLC+    ++A +VL    + G  P A +Y  LI  +CK G LD A+E
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 321  FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             L  ++S G  PD+V ++  +    K G   QA E+ E +   G  P+  +YNT+     
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 381  SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             +     A+ +   M   G EPD  TY +L             VG LVD +S +     +
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTL-------------VGHLVDKKSYKDLLAEV 1427

Query: 441  SYNIIILGFCKTRRINESIE 460
            S +++  GF     ++  +E
Sbjct: 1428 SKSMVDTGFKLNHELSSKLE 1447



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 247/533 (46%), Gaps = 76/533 (14%)

Query: 43   LIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            ++  SF +    D +   +E M    C PDVV  + LI    +    +KA  V + +   
Sbjct: 550  IVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC 609

Query: 102  G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
            G  P++  YN LI G CK N++E A ++L+ +R +  +PD +TY  +I  LC+   +E A
Sbjct: 610  GCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669

Query: 161  FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV----GQAFQF 216
            ++V  ++    C P  +TY  L++A       +   +LL EM   ++G       +  +F
Sbjct: 670  WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRF 729

Query: 217  V---------------------RSLESRGCQ----PDVISYNM------------LLRTL 239
            V                     R L+S+  Q    P    Y +            ++R L
Sbjct: 730  VIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRIL 789

Query: 240  LNMGKWEEGE--------KLMTEMISR----------------------GLEPNVVTYSI 269
             +   WE  E        KL T ++ +                      G   +  T + 
Sbjct: 790  NSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNC 849

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            L+ +L R  + +DA+ V R   +   +P+ +++  LI   C+ G +  A E L  M   G
Sbjct: 850  LLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG 907

Query: 330  CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRA 388
               +++ +N ++   C     D ALE+F+++ + G CPP+V +Y+T+  +L  SG    A
Sbjct: 908  VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967

Query: 389  LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
              ++ +M+SKG  P+ +TY+SL+  LC+ G +DEA  LL  M  +   P +++YN II G
Sbjct: 968  CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027

Query: 449  FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             CK  RI+E+  +L  M + GC+PN  TY +L++     G   +A+ L   +V
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 229/486 (47%), Gaps = 44/486 (9%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            +A K  E +  +E M++N C PD+V    +I    +  + + A  +  ++++ G  P++ 
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194

Query: 108  AYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN+L+ G CK+ + + A  +L  + R +G SPD++TYN +I  LC    ++ A+K+F Q
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +L D   P  +TY+I+I +       D+A  +L+ M                 G CK G 
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
            + +A + ++ L S+G  PDV+++++ +  L   G+  +  +L+  M+  GL P+ VTY+ 
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC-KDGRLDLAIEFLDYMISD 328
            L+   C    TEDAVD+    ++ G  PD  +Y  L+     K    DL  E    M+  
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDT 1434

Query: 329  G----------------CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            G                   D+     I+  F K G+   A ++FE +       NV  +
Sbjct: 1435 GFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ----RNVVLW 1490

Query: 373  NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
            + M         + +A G+   M  +G+EPD +T+ SL++  C  G++D AV   V +  
Sbjct: 1491 SAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISR 1550

Query: 433  TR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                 P V  ++ +I    +   +NE+ +++  M    CKP+  T+  L+      G   
Sbjct: 1551 DYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGM---PCKPSAATWNCLLSAYKICGDFE 1607

Query: 492  EAMELA 497
             A+ +A
Sbjct: 1608 RALRVA 1613



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 206/450 (45%), Gaps = 48/450 (10%)

Query: 79  IKKFFQERKSNKAVRV---------MEILEK--YGEPDVFAYNALISGFCKANQIELANK 127
           I++ F   K N   RV         + +LE+   G  D  A    +  +      E+  K
Sbjct: 39  IREHFALYKKNSLRRVDRWVGSDSPISVLERIVQGASDEQALRVALDEYRGQLSPEIVGK 98

Query: 128 VLDRL--------------RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           VL RL                 G+  ++   N ++  L        A  +F   +     
Sbjct: 99  VLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWG 158

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
              +TY+ LI   +  G+   A +L DEM   +KG+   A                  + 
Sbjct: 159 GDTVTYSTLISGFIRAGKILPAYELFDEMN--RKGLKAHAG----------------VHK 200

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            +LR L + G+  +      EM S+   P+ VTY+ +I+ L +  + +DA+ +L    + 
Sbjct: 201 SILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 259

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  P+ +SY+ ++  +CK  R++ A+  L+ M++ GC PD+V+Y T++   CK    D+A
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             + +K+   GC PNV +Y T+       GD   A+ ++ +M  +G  P+ ITYN+++  
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHV 379

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            CR   ++ A  +L  M  T   P  I+Y+ II GFCK  ++ E+ ++L  M  +GC+P+
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSM 503
                 LI+ +     +A A++ A  L+ M
Sbjct: 440 VACLSTLIDAL----CKAAAIDSAQELLRM 465



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 169/404 (41%), Gaps = 77/404 (19%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            ++ + D +      M+++G  PD V  + +I    + R  ++A  V+E++ K G +P   
Sbjct: 1241 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 1300

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             Y  LI GFCK   ++ A ++L  L S+G  PDVVT++I I  L  RG +  A ++ + +
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC---------------------- 205
            LR    P  +TY  L++       T+ A+ L + M  C                      
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420

Query: 206  -------KKGMVGQAFQFVRSLESR-------------GC-------------------- 225
                    K MV   F+    L S+             GC                    
Sbjct: 1421 KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE 1480

Query: 226  ---QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
               Q +V+ ++ +L   +   + E+   L   M   G+EP+ VT+  L++  C  G  + 
Sbjct: 1481 GMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDA 1540

Query: 283  AVD-VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            AVD  +  +++ GL P    +  +I      GRL L  E  D M+   C P    +N +L
Sbjct: 1541 AVDEFVSISRDYGLEPGVDHFSCVIDLL---GRLGLVNEAEDLMLGMPCKPSAATWNCLL 1597

Query: 342  AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            +A+   G+ ++AL + E        P  +SY  + S +++  DK
Sbjct: 1598 SAYKICGDFERALRVAE------LNPTQASY-LLLSNMYAQYDK 1634


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 240/469 (51%), Gaps = 19/469 (4%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEK 100
           ++++R    GK   +   I+ M      P    CT LI+ F ++   ++A + + +++  
Sbjct: 135 EILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMS 194

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
            G PD   YN +I G CK  ++  A  +++ +   G SPD +TYN +I  L  +G    A
Sbjct: 195 GGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQA 254

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
              +   LR  C P +ITYT+LI+         +A+++L++M M                
Sbjct: 255 VNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAM---------------- 298

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC PD+++YN L+      GK+E+   ++  ++S G++PN VTY+ LI SL   G  
Sbjct: 299 --EGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYW 356

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++  D+L+   E    P   +Y+ L++  CK G LD AI F   M+++ C PDI+ YNT+
Sbjct: 357 DEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTL 416

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L+  CK G  D+ +++   L    C P + +YN +   L   G    A  +  EM+ KGI
Sbjct: 417 LSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGI 476

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PDEIT++SL    CR   ++EA  LL +M     R    +Y  +ILG C+ ++++ +I+
Sbjct: 477 IPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQ 536

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           VL  M +  C P+E  Y  LI+ +  GG   EA +L   L+    + ++
Sbjct: 537 VLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKE 585



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 35/318 (11%)

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S E+   Q D ++ N +L+ L + GK     +L+  M  +   P+  + + LI    R G
Sbjct: 120 SPEAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKG 179

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A   L      G  PD  +Y+ +I   CK+GRL  A++ ++ M   GC PD + YN
Sbjct: 180 LVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYN 239

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+      GN +QA+  +      GCPP + +Y  +   +       RAL ++ +M  +
Sbjct: 240 SIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAME 299

Query: 399 GIEPDEITYNS-----------------------------------LISCLCRDGMVDEA 423
           G  PD +TYNS                                   LI  L   G  DE 
Sbjct: 300 GCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEV 359

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +L  M  T   PT ++YNI++ G CK+  ++ +I   + M  + C P+  TY  L+ G
Sbjct: 360 DDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSG 419

Query: 484 IGYGGWRAEAMELANALV 501
           +   G+  E ++L N LV
Sbjct: 420 LCKEGFIDEGIQLLNLLV 437


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 260/498 (52%), Gaps = 25/498 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG-EPDVFAY 109
           +  E+    E   A GC P VV    +I    +  +   A+ + + +   +G  P V  Y
Sbjct: 45  RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTY 104

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + LI G C+ ++++   K+L+ +  RG +P+ VTYN ++ +L  +G  + AF + +Q+  
Sbjct: 105 STLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAA 164

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GMCKKGMV 210
           + C P +IT+ ++I+    EG+ + A +++DEM                   G+CK+  +
Sbjct: 165 NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRI 224

Query: 211 GQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             A   F R+LE RGC+P+V++Y+ L+  L  M K +E  +L+ +M+  G   N VTYS 
Sbjct: 225 LDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++  L + G+ EDAV VLR  ++ G  PDA +Y+ LI  + K  RL  A+  L  M+  G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P +V Y T+    C++G  D+A+EI + ++  GC PN  +Y+++   L  +G    AL
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403

Query: 390 GMISEML-SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           G   +M   + + P  I Y++LI  LC+ G +DEA   L  M      P V++++I+I G
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            C   RI+  +E+   M E+GC P+  TY  L++ +       EA +L   + S   +S 
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS-DGLSP 522

Query: 509 DTFKRLNRTFPLLDVYKE 526
           D   R      LL+V ++
Sbjct: 523 DRSTRRTMIHGLLEVNRD 540



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 233/446 (52%), Gaps = 22/446 (4%)

Query: 78  LIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    + RK +KA+ +  ++++K   PDV  Y ALI G  K  +++ A  + +  R++G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKA 195
             P VVTYN MI  LC  G IE+A  ++D + +    +PTV+TY+ LI     + + DK 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 196 MKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            KLL+EM                  +  +G   +AF  +  + + GC P++I++ ++++ 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 239 LLNMGKWEEGEKLMTEM--ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           L   G+ E   +++ EM  I  GL P+V+T++ ++  LC++ +  DA +V + A E+G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  LI    K  ++D A++ L  M+  GC  + V Y+T++    K G  + A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++ D GC P+  +YNT+    +       A+G++ EML  G  P  +TY +L   LCR
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKPNET 475
            G  DEAV +L  M +    P  I+Y+ I+ G CK  R+ E++     M  ++   P+  
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
            Y  LI+G+   G   EA E    ++
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMI 446



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 211/436 (48%), Gaps = 21/436 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R  + D+    +E M   GC P+ V    L+     + +S +A  ++E + 
Sbjct: 104 YSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLR--SRGFSPDVVTYNIMIGSLCSRGM 156
             G  P++  +  +I G CK  +IE A +V+D +     G SPDV+T+N ++  LC    
Sbjct: 164 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           I  A  VF + L   C+P V+TY+ LI       + D+A++LL +M              
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+ K G +  A   +R +   GC PD ++YN L+       +  E   L+ EM+  G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P+VVTY+ L   LCR G+ ++AV++L     +G  P+A +Y  ++   CK GR+  A+
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403

Query: 320 EFLDYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            + + M  D  + P ++ Y+ ++   CK G  D+A E  E++   G  P+V +++ + + 
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G     L +   M  +G  PD +TY +L+  LCR   VDEA  L   M S    P 
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPD 523

Query: 439 VISYNIIILGFCKTRR 454
             +   +I G  +  R
Sbjct: 524 RSTRRTMIHGLLEVNR 539



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 20/208 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDV 106
           R+G+FDE++  ++ M A GC P+ +  + ++    +  +  +A+   E +  ++   P V
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AY+ALI G CKA +I+ A + L+R+   G  PDVVT++I+I  LC  G I++  ++F  
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +    C P ++TY  L+                    +C+   V +AF   + + S G  
Sbjct: 480 MAERGCVPDMVTYATLVDR------------------LCRASRVDEAFDLFQQMRSDGLS 521

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           PD  +   ++  LL + + E+ +++  E
Sbjct: 522 PDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 255/473 (53%), Gaps = 18/473 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KFD  +   E M   G   +    + LI  F +  +   A+ V+  +
Sbjct: 83  EFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKM 142

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP++   ++L++G+C + +I  A  ++D++   G+ P+ VT+N +I  L      
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + D+++   C+P ++TY +++      G TD A  LL++M               
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK   +  A    + +E++G +P+V++Y+ L+  L N G+W +  +L+++MI R +
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+V T+S LI +  ++GK  +A  +     ++ + P   +Y  LI+ +C   RLD A +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             ++M+S  C PD+V+Y+T++  FCK    D+ +E+F ++S  G   N  +Y T+   L+
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +GD   A  +  EM+S G+ P+ +TYN+L+  LC++G +++A+ +   ++ ++  PT+ 
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +YNI+I G CK  ++ +  ++   +  KG KP+   Y  +I G    G + EA
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 227/479 (47%), Gaps = 20/479 (4%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
           T+ S +N   + + R+S +        +  +      F  LI   F   K  E++  I+ 
Sbjct: 153 TLSSLLNGYCHSK-RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDR 211

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           MVA GC+PD+V    ++    +   ++ A  ++  +E+   EP V  Y  +I G CK   
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKH 271

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A  +   + ++G  P+VVTY+ +I  LC+ G    A ++   ++     P V T++ 
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI A + EG+  +A KL DEM                    R   P +++Y+ L+     
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEM------------------VKRSIDPSIVTYSSLINGFCM 373

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             + +E +++   M+S+   P+VV+YS LI   C+  + ++ +++ R   ++GL  +  +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI    + G  D+A E    M+SDG  P+I+ YNT+L   CKNG  ++A+ +FE L 
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                P + +YN M   +  +G       +   +  KG++PD + YN++IS  CR G  +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           EA  L  +M+     P    YN +I    +      S E++  M   G   + +T  L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 210/427 (49%), Gaps = 19/427 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL +    E K + AV +  E+++    P +  ++ L+S   K N+ ++   + +++++ 
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   +  TY+I+I   C R  +  A  V  ++++   +P ++T + L+            
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN----------- 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C    + +A   V  +   G QP+ +++N L+  L    K  E   L+  M
Sbjct: 160 -------GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 212

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +++G +P++VTY ++++ LC+ G T+ A  +L   ++  L P    Y  +I   CK+  +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHM 272

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+     M + G  P++V Y+++++  C  G    A  +   + +    P+V +++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             A    G  + A  +  EM+ + I+P  +TY+SLI+  C    +DEA  +   M S   
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V+SY+ +I GFCK +R++E +E+   M ++G   N  TY  LI+G+   G    A E
Sbjct: 393 FPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE 452

Query: 496 LANALVS 502
           +   +VS
Sbjct: 453 IFKEMVS 459



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 26/381 (6%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  +F ++++    P++I ++ L+ A     + D  + L ++M              
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-------------- 107

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               ++ G   +  +Y++L+       +      ++ +M+  G EPN+VT S L++  C 
Sbjct: 108 ----QNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  +AV ++      G  P+  +++ LI       +   A+  +D M++ GC PD+V 
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVT 223

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++   CK G+ D A  +  K+      P V  Y T+   L  +     AL +  EM 
Sbjct: 224 YGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEME 283

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           +KGI P+ +TY+SLISCLC  G   +A  LL DM   +  P V +++ +I  F K  ++ 
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH----AISRDT-- 510
           E+ ++   M ++   P+  TY  LI G        EA ++   +VS H     +S  T  
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403

Query: 511 --FKRLNRTFPLLDVYKEISH 529
             F +  R    +++++E+S 
Sbjct: 404 KGFCKAKRVDEGMELFREMSQ 424


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 254/511 (49%), Gaps = 54/511 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R G F  ++  +E + A GC  DV  C  ++     +   +KA+ ++  L 
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLP 219

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G EPDV +YNA++ G C A +     ++++ +      P++VT+N +I  LC  G+ E
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q+    C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 280 RVHEVLAQMAEHGCTPDIRMYATIID------------------GICKEGHLKVAHEILN 321

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S G +P+V+ YN LL+ L +  +WEE E+L+ EM  +    + VT++IL+   C++G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY- 337
             +  +++L      G  PD  +Y  +I+ +CK+G +D A+  L  M + GC P+ ++Y 
Sbjct: 382 LVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 338 ----------------------------------NTILAAFCKNGNADQALEIFEKLSDV 363
                                             NT++   CK G  +QA+E+ +++   
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KG+ P+ I Y+S+ S L R+G +++ 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK      +IE LA M   GC PNE+TY +LI G
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           +   G+  EA E+   L S  A+ +   K  
Sbjct: 622 LASEGFVKEAQEMLTELCSKGALRKHLMKHF 652



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 226/446 (50%), Gaps = 55/446 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNA+++G+C+A Q+E A ++   +      P+  TY  ++ +LC+RG I  A  V D++ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R  C P    Y ++++A    G    A+++L+++                  +C +G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +R L S GC+PDV+SYN +L+ L    +W   ++LM EM+     PN+VT++ LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S LCR+G  E   +VL    E G TPD   Y  +I   CK+G L +A E L+ M S G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P++V YNT+L   C     ++  E+  ++ D  CP +  ++N +      +G   R + +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + +ML  G  PD ITY ++I+  C++G++DEAV LL  M +   +P  ISY I++ G C 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 452 TRR-----------------------------------INESIEVLAAMFEKGCKPNETT 476
             R                                   + ++IE+L  M   GC P+  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           Y  +I+G+G  G   EA+EL N +V+
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVN 535



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 265 VTYSILISSLCRDGKTEDAV-----------------------------DVLRAAKEKGL 295
           V  S LI SLC  G+T +A                                 R A    +
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVPV 118

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P+AY+Y P++ A C  GR+  A+  LD M   GC P    Y+ IL A C+ G    A+ 
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + E L   GC  +V + N + +A+   G   +AL ++ ++ S G EPD ++YN+++  LC
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 416 ---RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
              R G V E   L+ +M      P ++++N +I   C+        EVLA M E GC P
Sbjct: 239 MAKRWGCVQE---LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTP 295

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   Y  +I+GI   G    A E+ N + S
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPS 325


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 265/523 (50%), Gaps = 58/523 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R+G F  S+  +E+M A GC  D   C  ++    ++   ++AV ++  L 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G E D+ +YNA++ G C A +     +++D +     +P++VT+N +IG LC  G+ E
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q+    C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIID------------------GICKEGHLEVANEILN 310

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----------------------- 255
            + S G +P+V+ YN +L+ L +  +W+E E+L++EM                       
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 256 ------------ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
                       +S G  P+V+TY+ +I+  C++G  ++AV +L++    G  P+  SY 
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   C  GR   A E +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KGI P+ I Y+S+   L R+G V++ 
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK    + +I+  A M   GC PNE+TY +LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
           +   G   EA EL + L S  A+     K L R F + +  +E
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR----KHLMRHFGISNCTQE 649



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 219/408 (53%), Gaps = 20/408 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V AYNA+++G+C+A Q+  A ++   +      P+  T+  ++  LC+RG I  A +V D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++    C P    Y ++++A    G    ++++L+ M                  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +A   +R L   GC+ D++SYN +L+ L    +W + E+LM EM+     PN+VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT+L   C      +A E+  ++    CP +  ++N +      +G   R 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + ++ +MLS G  PD ITY ++I+  C++G++DEAV LL  M S   +P  +SY I++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C   R  ++ E+++ M ++GC PN  T+  LI  +   G   +A+EL
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 143/276 (51%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  ++  ++R L   G+  +  +++ EM  +G  P    Y +++ + CR G   ++V V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L A   KG T D  + + +++A C+ G +D A+  L  +   GC  DIV+YN +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                   E+ +++  V C PN+ ++NT+   L  +G   R   ++++M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y ++I  +C++G ++ A  +L  M S   +P V+ YN ++ G C   R  E+ E+L+ MF
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +K C  ++ T+ +L++     G     +EL   ++S
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD----------------- 312
           LI SLC  G+T +A   L  A +        +Y+ +++ YC+                  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 313 ---------------GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
                          GR+  A+E LD M   GC P    Y+ IL A C++G    ++ + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-- 415
           E +   GC  +  + N + +A+   G    A+G++ ++   G E D ++YN+++  LC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 416 -RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R G V+E   L+ +M      P ++++N +I   C+        EVLA M E GC P+ 
Sbjct: 230 KRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I+GI   G    A E+ N + S
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPS 314


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 265/523 (50%), Gaps = 58/523 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R+G F  S+  +E+M A GC  D   C  ++    ++   ++AV ++  L 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G E D+ +YNA++ G C A +     +++D +     +P++VT+N +IG LC  G+ E
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q+    C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIID------------------GICKEGHLEVANEILN 310

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----------------------- 255
            + S G +P+V+ YN +L+ L +  +W+E E+L++EM                       
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 256 ------------ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
                       +S G  P+V+TY+ +I+  C++G  ++AV +L++    G  P+  SY 
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   C  GR   A E +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KGI P+ I Y+S+   L R+G V++ 
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK    + +I+  A M   GC PNE+TY +LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
           +   G   EA EL + L S  A+     K L R F + +  +E
Sbjct: 611 LASEGLAKEAQELLSELCSRGALR----KHLMRHFGISNCTQE 649



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 219/408 (53%), Gaps = 20/408 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V AYNA+++G+C+A Q+  A ++   +      P+  T+  ++  LC+RG I  A +V D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++    C P    Y ++++A    G    ++++L+ M                  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +A   +R L   GC+ D++SYN +L+ L    +W + E+LM EM+     PN+VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT+L   C      +A E+  ++    CP +  ++N +      +G   R 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + ++ +MLS G  PD ITY ++I+  C++G++DEAV LL  M S   +P  +SY I++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C   R  ++ E+++ M ++GC PN  T+  LI  +   G   +A+EL
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 143/276 (51%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  ++  ++R L   G+  +  +++ EM  +G  P    Y +++ + CR G   ++V V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L A   KG T D  + + +++A C+ G +D A+  L  +   GC  DIV+YN +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                   E+ +++  V C PN+ ++NT+   L  +G   R   ++++M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y ++I  +C++G ++ A  +L  M S   +P V+ YN ++ G C   R  E+ E+L+ MF
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +K C  ++ T+ +L++     G     +EL   ++S
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD----------------- 312
           LI SLC  G+T +A   L  A +        +Y+ +++ YC+                  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 313 ---------------GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
                          GR+  A+E LD M   GC P    Y+ IL A C++G    ++ + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-- 415
           E +   GC  +  + N + +A+   G    A+G++ ++   G E D ++YN+++  LC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 416 -RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R G V+E   L+ +M      P ++++N +I   C+        EVLA M E GC P+ 
Sbjct: 230 KRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I+GI   G    A E+ N + S
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPS 314


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 238/452 (52%), Gaps = 22/452 (4%)

Query: 53  FDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFAY 109
            D+++ F +      G K     C  L+  F +++K+ +A  + +   + G   PD   Y
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKN-HRCGLCSPDSITY 170

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + LI+GFCKA   + A ++LD +  RG  P    YN +I  LC  G ++SA   +  + R
Sbjct: 171 STLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR 230

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            NC P+VITYTIL+ A     +   A  +L++M                 G CK G + +
Sbjct: 231 -NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      +    C PDV +YN+L+       + ++G KL+ EM+  G EPN +TY+ L+ 
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           SL + GK  DA ++ +    +   P  ++++ +I  +CK G+LDLA E    M   GCLP
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DI  YN +++  C+    D A ++ E++++ GCPP+V +YN++ S L  +     A  + 
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             + + G   D +T ++LI  LC+   +D+A  LL +ME     P V++Y I+I GFCK 
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++++S+   + M +KGC P   TY ++I+ +
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 227/455 (49%), Gaps = 19/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           ++ +  ++   +E M+  GC P+VV    LI  F +    ++AV +  ++LE    PDVF
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+CK  + +   K+L  +   G  P+ +TYN ++ SL   G    AF +   +
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           LR +CKP+  T+ ++I                     CK G +  A++  + +  RGC P
Sbjct: 368 LRRDCKPSHFTFNLMIDM------------------FCKVGQLDLAYELFQLMTDRGCLP 409

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+ +YN+++       + ++  +L+  M   G  P+VVTY+ ++S LC+  + ++A +V 
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G   D  +   LI   CK  RLD A + L  M  +G  PD+V Y  ++  FCK 
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D++L  F ++ D GC P V +Y+ +   L  S        ++  ML +G+ PD I Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            S+I  LC+    DEA  L   M+ T   PTV++YN+++   CK  R++E+I +L  M  
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            GC P+  TY  + +G        +A  L  A+ S
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 18/382 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    ++GK+ ++    + M+   CKP       +I  F +  + + A  + +++ 
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD++ YN +ISG C+AN+I+ A ++L+R+   G  PDVVTYN ++  LC    ++
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A++V++ L        V+T + LI       + D A KLL EM                
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK   + ++  F   +  +GC P VI+Y++++  L    +  +G  L+  M+ RG+ 
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ + Y+ +I  LC+    ++A ++ +  K+ G  P   +Y+ L+   CK  RLD AI  
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHL 643

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M SDGCLPD V YN++   F K+   D+A  +F+ +   GC P    Y+ + + L +
Sbjct: 644 LEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVA 703

Query: 382 SGDKIRALGMISEMLSKGIEPD 403
                +A+ +  E L  G + D
Sbjct: 704 EEKMDQAMEIWEEALEAGADVD 725



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 19/365 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+     T N ++ +   +   + A+ +F       C P  ITY+ LI            
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLIN----------- 175

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK     QA++ +  +E RG  P    YN +++ L + G+ +       +M
Sbjct: 176 -------GFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 228

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             R   P+V+TY+IL+ +LC+  +  DA  +L    E G  P+  +Y+ LI+ +CK G +
Sbjct: 229 -QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+   + M+ + C PD+  YN ++  +CK        ++ +++   GC PN  +YNT+
Sbjct: 288 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             +L  SG  I A  +   ML +  +P   T+N +I   C+ G +D A  L   M     
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P + +YNI+I G C+  RI+++ ++L  M E GC P+  TY  ++ G+       EA E
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 496 LANAL 500
           +   L
Sbjct: 468 VYEVL 472



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 8/273 (2%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G + +  T + L+S+  R  K ++A D+ +  +    +PD+ +Y  LI+ +CK      A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              LD M   G +P    YNTI+   C NG  D AL  +  +    C P+V +Y  +  A
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDA 245

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  S     A  ++ +M+  G  P+ +TYN+LI+  C+ G +DEAV L   M      P 
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V +YNI+I G+CK  R  +  ++L  M + GC+PN  TY  L++ +   G   +A  LA 
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365

Query: 499 ALVSMHAISRDTFKRLNRTFPLL-DVYKEISHL 530
            ++      R   K  + TF L+ D++ ++  L
Sbjct: 366 MML------RRDCKPSHFTFNLMIDMFCKVGQL 392


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 259/511 (50%), Gaps = 54/511 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R+G F  S+  +E+M A GC  D   C  ++    ++   ++AV ++  L 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G E D+ +YNA++ G C A +     +++D +     +P++VT+N +IG LC  G+ E
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q+    C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIID------------------GICKEGHLEVANEILN 310

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----------------------- 255
            + S G +P+V+ YN +L+ L +  +W+E E+L++EM                       
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 256 ------------ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
                       +S G  P+V+TY+ +I+  C++G  ++AV +L++    G  P+  SY 
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   C  GR   A E +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KGI P+ I Y+S+   L R+G V++ 
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK    + +I+  A M   GC PNE+TY +LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           +   G   EA EL + L S  A+ +   +  
Sbjct: 611 LASEGLAKEAQELLSELCSRGALRKHLMRHF 641



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 219/408 (53%), Gaps = 20/408 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V AYNA+++G+C+A Q+  A ++   +      P+  T+  ++  LC+RG I  A +V D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++    C P    Y ++++A    G    ++++L+ M                  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +A   +R L   GC+ D++SYN +L+ L    +W + E+LM EM+     PN+VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT+L   C      +A E+  ++    CP +  ++N +      +G   R 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + ++ +MLS G  PD ITY ++I+  C++G++DEAV LL  M S   +P  +SY I++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C   R  ++ E+++ M ++GC PN  T+  LI  +   G   +A+EL
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 143/276 (51%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  ++  ++R L   G+  +  +++ EM  +G  P    Y +++ + CR G   ++V V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L A   KG T D  + + +++A C+ G +D A+  L  +   GC  DIV+YN +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                   E+ +++  V C PN+ ++NT+   L  +G   R   ++++M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y ++I  +C++G ++ A  +L  M S   +P V+ YN ++ G C   R  E+ E+L+ MF
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +K C  ++ T+ +L++     G     +EL   ++S
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD----------------- 312
           LI SLC  G+T +A   L  A +        +Y+ +++ YC+                  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 313 ---------------GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
                          GR+  A+E LD M   GC P    Y+ IL A C++G    ++ + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-- 415
           E +   GC  +  + N + +A+   G    A+G++ ++   G E D ++YN+++  LC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 416 -RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R G V+E   L+ +M      P ++++N +I   C+        EVLA M E GC P+ 
Sbjct: 230 KRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I+GI   G    A E+ N + S
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPS 314


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 259/511 (50%), Gaps = 54/511 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++ + R+G F  S+  +E+M A GC  D   C  ++    ++   ++AV ++  L 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G E D+ +YNA++ G C A +     +++D +     +P++VT+N +IG LC  G+ E
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V  Q+    C P +  Y  +I                   G+CK+G +  A + + 
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIID------------------GICKEGHLEVANEILN 310

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----------------------- 255
            + S G +P+V+ YN +L+ L +  +W+E E+L++EM                       
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 256 ------------ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
                       +S G  P+V+TY+ +I+  C++G  ++AV +L++    G  P+  SY 
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   C  GR   A E +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ SY+T+   L  +G    AL +++ M++KGI P+ I Y+S+   L R+G V++ 
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +  +++ T  R   + YN +I   CK    + +I+  A M   GC PNE+TY +LI+G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           +   G   EA EL + L S  A+ +   +  
Sbjct: 611 LASEGLAKEAQELLSELCSRGALRKHLMRHF 641



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 219/408 (53%), Gaps = 20/408 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V AYNA+++G+C+A Q+  A ++   +      P+  T+  ++  LC+RG I  A +V D
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++    C P    Y ++++A    G    ++++L+ M                  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +A   +R L   GC+ D++SYN +L+ L    +W + E+LM EM+     PN+VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LCR+G  E   +VL    E G TPD   Y  +I   CK+G L++A E L+ M S 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT+L   C      +A E+  ++    CP +  ++N +      +G   R 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + ++ +MLS G  PD ITY ++I+  C++G++DEAV LL  M S   +P  +SY I++ G
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C   R  ++ E+++ M ++GC PN  T+  LI  +   G   +A+EL
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 143/276 (51%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  ++  ++R L   G+  +  +++ EM  +G  P    Y +++ + CR G   ++V V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L A   KG T D  + + +++A C+ G +D A+  L  +   GC  DIV+YN +L   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                   E+ +++  V C PN+ ++NT+   L  +G   R   ++++M   G  PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y ++I  +C++G ++ A  +L  M S   +P V+ YN ++ G C   R  E+ E+L+ MF
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +K C  ++ T+ +L++     G     +EL   ++S
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD----------------- 312
           LI SLC  G+T +A   L  A +        +Y+ +++ YC+                  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 313 ---------------GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
                          GR+  A+E LD M   GC P    Y+ IL A C++G    ++ + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-- 415
           E +   GC  +  + N + +A+   G    A+G++ ++   G E D ++YN+++  LC  
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 416 -RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R G V+E   L+ +M      P ++++N +I   C+        EVLA M E GC P+ 
Sbjct: 230 KRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I+GI   G    A E+ N + S
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPS 314


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 238/453 (52%), Gaps = 23/453 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G+ DE+L  + SM  +GC PD V+   +I     +   N+A  +++ +   G   DV 
Sbjct: 184 RLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVN 243

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N ++ G C   ++  A +++DR+  RG  P+ +TY  ++  LC    +E A  +  ++
Sbjct: 244 TFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRV 303

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              N    V+ +  +I   +L+G+  +A +L + MG                  S+GC P
Sbjct: 304 PELN----VVLFNTVIGRCLLDGKLKEAAELYETMG------------------SKGCPP 341

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D  +Y++L+  L  +G+     KL+ EM  +G  P++VTY+IL+ S CR+G  ++   +L
Sbjct: 342 DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAML 401

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +KGL+ +   Y+ +I A CKD R+D A+ F+  M S G  PDI  YNTI+   C N
Sbjct: 402 EVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              ++A  +FE L   G   N  +YNT+  AL  +G    A+ + ++M+  G   D ++Y
Sbjct: 462 NQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSY 521

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LCRDG VD ++ LL +M     +P  +SYN++I   CKTRR+ +++E+   M  
Sbjct: 522 NGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLN 581

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +   P+  TY  LI G+   GW   A+ L   L
Sbjct: 582 QELTPDIVTYNTLINGLCKMGWMHAALNLLEKL 614



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 218/464 (46%), Gaps = 39/464 (8%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYG-EPDVFAYNA 111
           + +L+ +ES+  +   P   +   L+   F+     +A+ +++ L  ++   P   +YN 
Sbjct: 85  ERALFLLESLPPSRVPP---LRESLLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNT 141

Query: 112 LISGF----CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +++ F    C  + + L  +++ R R     P   T++I   +LC  G  + A  +   +
Sbjct: 142 VLAAFARADCHTDVLSLYRRMVHRDR---VPPTTFTFSIAARALCRLGRADEALTMLRSM 198

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R  C P  + Y  +I A   +G  ++A  LLDEM +                   GC  
Sbjct: 199 ARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL------------------MGCSA 240

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV ++N ++  L  +G+  E  +L+  M+ RG  PN +TY  L+  LC   + E+A  +L
Sbjct: 241 DVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML 300

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E  +      ++ +I     DG+L  A E  + M S GC PD   Y+ ++   CK 
Sbjct: 301 GRVPELNVV----LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKL 356

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEI 405
           G    A+++  ++ D G  P++ +Y  +  +   +G  D IRA  M+  M  KG+  +  
Sbjct: 357 GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA--MLEVMSDKGLSMNLE 414

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            YN +I  +C+D  +D+A+  + +M+S  ++P + +YN II   C   ++ E+  +   +
Sbjct: 415 GYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
             +G   N  TY  LI  +   G   +A+ LAN +V +H  S D
Sbjct: 475 LHEGVVANAITYNTLIHALLRNGSWQDAISLANDMV-LHGCSLD 517


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 243/474 (51%), Gaps = 20/474 (4%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           +ET  + L K  ++ GK  E+   ++ M +    PD   C  +I+ F    + +KAV+V+
Sbjct: 137 EETNNVILQKFCYK-GKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVL 195

Query: 96  EILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +I+   G  PD+  YN +I   CK   +E A ++L+ +   G  PDV+TYN +I  +   
Sbjct: 196 KIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDN 255

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G  + A + + + LR    P +ITYTILI+       T  A+++L+EM            
Sbjct: 256 GCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMA----------- 304

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                  + GC PD+++YN L+      GK+E+   ++  ++  G+ P+ VTY+ L+ SL
Sbjct: 305 -------NEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSL 357

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            R G  ++  ++L+        P   + + LI+  CK+G LD AI FL+ M S  CLPDI
Sbjct: 358 SRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDI 417

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           + YNT+L A CK G  D+A ++   L+D  C P + SYNT+   L   G   +A+ + S+
Sbjct: 418 ITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQ 477

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+  GI PD+ T+ S+I   CR     EAV  L  +    +      Y I++   C  ++
Sbjct: 478 MMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKK 537

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           ++ +I+VL  M    CK NET Y  +I  I   G + +A EL   L+    + +
Sbjct: 538 VDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGK 591



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 181/379 (47%), Gaps = 28/379 (7%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N+++   C +G +  A +V D +   N  P       +I+  +   + DKA+++L
Sbjct: 136 DEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVL 195

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
             M M                   G  PD+I+YNM++  L   G  E   +L+ +M   G
Sbjct: 196 KIMVM------------------SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSG 237

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P+V+TY+ +I  +  +G  + AV+  +    KG  P   +Y  LI    K      A+
Sbjct: 238 CPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCAL 297

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E L+ M ++GC PD+V YN+++   CK G  + A  + + L   G  P+  +YNT+  +L
Sbjct: 298 EVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSL 357

Query: 380 -----WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
                W   D+I  +  IS        P  +T N LI+ LC++G++D A+  L  M S  
Sbjct: 358 SRRGHWDEVDEILKIMSISLQ-----PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYN 412

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P +I+YN ++   CK   ++E+ ++L  + +  C P   +Y  +++G+   G+  +AM
Sbjct: 413 CLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAM 472

Query: 495 ELANALVSMHAISRDTFKR 513
            L + ++    I  DT  R
Sbjct: 473 SLYSQMMENGIIPDDTTHR 491


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 244/461 (52%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D++L     M+    +P VV   + +    ++++ +  V +   ++ +G   +V++ N L
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+  C+ N +  A  VL ++   G  PD +T+N +I   C  G I+ A  +F++++R   
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P VI+Y+ +I      G T  A++LL +M                  +CK  +V  A  
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  RG  PDV++Y+ +L    ++G   E   L  EM+ R + PN VT++IL+  LC
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G   +A  V  A  +KG  P+AY+Y+ L+  YC + ++D A + LD M+  GC P + 
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN ++  +CK    D+A  +  ++S+    P+  +Y+T+   L   G    AL +  EM
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G+ PD +TY++L+  LC+ G +DEA+ LL  M+ ++  P ++ YNI+I G     ++
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + E+ + +F  G +P   TY ++I+G+   G   EA EL
Sbjct: 494 EVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 232/444 (52%), Gaps = 19/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      G+  E++     MV  G +PDV+  + +I    +   ++ A++++  +E
Sbjct: 165 FNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME 224

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P++ AY  +I   CK   +  A  +L  +  RG  PDVVTY+ ++   CS G + 
Sbjct: 225 EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLN 284

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++++  N  P  +T+TIL+                   G+CK+GMV +A     
Sbjct: 285 EATILFNEMVGRNVMPNTVTFTILVD------------------GLCKEGMVSEARCVFE 326

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++  +G +P+  +YN L+       + +E +K++  M+ +G  P V +Y+ILI+  C+  
Sbjct: 327 AMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR 386

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +L    EK LTPD  +Y  L+   C+ GR   A+     M S G LPD++ Y+
Sbjct: 387 RLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+L   CK+G+ D+AL++ + + +    P++  YN +   ++ +G    A  + S++ + 
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFAD 506

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI+P   TY  +I  L ++G+ DEA  L   ME   F P   SYN+II GF + +  + +
Sbjct: 507 GIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTA 566

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I ++  M  K    + +T+ +L++
Sbjct: 567 IRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 18/390 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           ++G    +L  +  M   GCKP++V  T +I    ++   N A+ ++ E++++   PDV 
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ ++ GFC    +  A  + + +  R   P+ VT+ I++  LC  GM+  A  VF+ +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +   +P   TY  L+    L  Q D+A K+LD M                 G CK+  +
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +   PD ++Y+ L++ L  +G+ +E   L  EM S GL P+++TYS L
Sbjct: 389 DEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTL 448

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC+ G  ++A+ +L++ +E  + PD   Y+ LI      G+L++A E    + +DG 
Sbjct: 449 LDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGI 508

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P I  Y  ++    K G +D+A E+F K+ D G  PN  SYN +      + D   A+ 
Sbjct: 509 QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +I EM+ K    D  T+  L+    RD ++
Sbjct: 569 LIDEMVGKRFSADSSTFQMLLDLESRDEII 598



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 184/363 (50%), Gaps = 17/363 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------ 204
           I+ A   F ++LR N +P+V+ +   + +   + Q    + L ++M +            
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V  A   +  +   G QPD I++N L+      G+ +E   L  EM+ RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +P+V++YS +I+ LC+ G T  A+ +LR  +EKG  P+  +Y  +I + CKD  ++ A+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + L  M+  G  PD+V Y+TIL  FC  G+ ++A  +F ++      PN  ++  +   L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  +   M  KG EP+  TYN+L+   C +  +DEA  +L  M      P V
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI+I G+CK RR++E+  +L  M EK   P+  TY  L++G+   G   EA+ L   
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 500 LVS 502
           + S
Sbjct: 433 MCS 435


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 241/467 (51%), Gaps = 19/467 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI    +  K   +   ++ M  +G  P+VV  + +I  F ++ K + A ++  
Sbjct: 42  EWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR 101

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++E    P++  YN L+SG C+   ++ A ++LD +R RG  PD  +Y+ ++  LC  G
Sbjct: 102 QMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 161

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ A KVF+     +C P V+ Y+ LI                   G+CK G + +A +
Sbjct: 162 KIDMALKVFEDNSNGDCPPDVVAYSTLIA------------------GLCKTGRLDEACK 203

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +    C+PDV+++  L+  L    + +E ++++  M  R   PNV+TYS LI  LC
Sbjct: 204 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 263

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G+  DA +V +    +G+ P+  +Y+ LI  +C    +D A+  ++ M + GCLPDI+
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   CK G A +A  +F  +    C P+V +Y+ +            A  +  +M
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L + + PD +T+++L+   C  G+VD+A  LL +M ++   P V +Y  ++ GFCK  R+
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E+  VL  M ++GC+PN  TY  LI+     G    A +L   +V 
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 228/436 (52%), Gaps = 19/436 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELAN 126
           C+ +V+  T +I    +  +  +A      ++K G  P+ + YN LI+GFCK +++  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +L  ++  G +P+VVTY+ +I   C +  +++A+K+F Q++ + C P ++TY  L+   
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS-- 120

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+C+ G++ +A++ +  +  RG QPD  SY+ L+  L   GK +
Sbjct: 121 ----------------GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 164

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
              K+  +  +    P+VV YS LI+ LC+ G+ ++A  +    +E    PD  ++  L+
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK  RL  A + L+ M    C P+++ Y++++   CK G    A E+F+++   G  
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 284

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV +YN++      +     AL ++ EM + G  PD ITYN+LI  LC+ G   EA  L
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             DM++    P VI+Y+ +I GFCK  RI+ +  +   M ++   P+  T+  L+EG   
Sbjct: 345 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 404

Query: 487 GGWRAEAMELANALVS 502
            G   +A  L   +V+
Sbjct: 405 AGLVDDAERLLEEMVA 420



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 235/474 (49%), Gaps = 20/474 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVF 107
           + GK D +L   E      C PDVV  + LI    +  + ++A ++ E + E   EPDV 
Sbjct: 159 KTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV 218

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + AL+ G CK ++++ A +VL+ +  R  +P+V+TY+ +I  LC  G +  A +VF ++
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P V+TY  LI    +    D A+ L++EM                 G+CK G  
Sbjct: 279 IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 338

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    ++++ C PDVI+Y+ L+     + + +    L  +M+ + + P+VVT+S L
Sbjct: 339 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 398

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C  G  +DA  +L        +PD Y+Y  L+  +CK GR+  A   L  M   GC
Sbjct: 399 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 458

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y  ++ AFC+ G    A ++ E++   G  PNV +Y ++      +GD   A  
Sbjct: 459 QPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK 518

Query: 391 MISEM-LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           M+  +   +  + D   Y  ++  LCR G +  A+ LL  ++ +   P    Y  +I G 
Sbjct: 519 MLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578

Query: 450 CKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           C+ + + +++EVL  M   +  +PN   Y  +I+ +   G   EA  LA+ L+ 
Sbjct: 579 CQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 160/379 (42%), Gaps = 90/379 (23%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+  ++    + M+  G +P+VV    LI  F      + A+ +ME + 
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN LI G CK  +   AN++   ++++  +PDV+TY+ +IG  C    I+
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD +L+    P V+T++ L++     G  D A +LL+EM                
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G + +A + ++ +  RGCQP+V++Y  L+      GK     KL+ EM+  G++
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQ 494

Query: 262 PNVVTYSILISS------------------------------------LCRDGKTEDAVD 285
           PNV+TY  LI                                      LCR G+   A++
Sbjct: 495 PNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 554

Query: 286 VLRAAKEKGLTP------------------------------------DAYSYDPLISAY 309
           +L A K+ G  P                                    +A +Y+ +I   
Sbjct: 555 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 614

Query: 310 CKDGRLDLAIEFLDYMISD 328
            ++GR + A    D ++ +
Sbjct: 615 AREGRHEEANALADELLGN 633


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 240/467 (51%), Gaps = 19/467 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI    +  K   +   ++ M  +G  P+VV  + +I  F ++ K + A ++  
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR 220

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++E    P++  YN L+SG C+   ++ A ++LD +R RG  PD  +Y+ ++  LC  G
Sbjct: 221 QMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 280

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ A KVF+     +C P V+ Y+ LI                   G+CK G + +A +
Sbjct: 281 KIDMALKVFEDNSNGDCPPDVVAYSTLIA------------------GLCKAGRLDEACK 322

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +    C+PDV+++  L+  L    + +E ++++  M  R   PNV+TYS LI  LC
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G+  DA +V +    +G+ P+  +Y+ LI  +C    +D A+  ++ M + GCLPDI+
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   CK G A +A  +F  +    C P+V +Y+ +            A  +  +M
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L + + PD +T+++L+   C  G+VD+A  LL +M ++   P V +Y  ++ GFCK  R+
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E+  VL  M ++GC+PN  TY  LI+     G    A  L   +V 
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 239/467 (51%), Gaps = 24/467 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            FD     + +L +   RA + DE+ + +++    G  P+V     +I+   +    +KA
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             ++E + + G  PD   YN +I   CKA       K LD  RS     +V+T+ IMI  
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTA---KALDYFRSMECEKNVITWTIMIDG 135

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC    +  A   F ++ +    P   TY +LI                   G CK   V
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN------------------GFCKVHKV 177

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A+  ++ ++  G  P+V++Y+ ++       K +   KL  +M+  G  PN+VTY+ L
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +S LCR+G  ++A ++L   +E+GL PD +SYD L++  CK G++D+A++  +   +  C
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-AL 389
            PD+V Y+T++A  CK G  D+A ++FEK+ +  C P+V ++  +   L   GD+++ A 
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL-CKGDRLQEAQ 356

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++  M  +   P+ ITY+SLI  LC+ G V +A  +   M      P V++YN +I GF
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C T  ++ ++ ++  M   GC P+  TY  LI+G+   G   EA  L
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 228/436 (52%), Gaps = 19/436 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELAN 126
           C+ +V+  T +I    +  +  +A      ++K G  P+ + YN LI+GFCK +++  A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +L  ++  G +P+VVTY+ +I   C +  +++A+K+F Q++ + C P ++TY  L+   
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS-- 239

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+C+ G++ +A++ +  +  RG QPD  SY+ L+  L   GK +
Sbjct: 240 ----------------GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 283

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
              K+  +  +    P+VV YS LI+ LC+ G+ ++A  +    +E    PD  ++  L+
Sbjct: 284 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALM 343

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK  RL  A + L+ M    C P+++ Y++++   CK G    A E+F+++   G  
Sbjct: 344 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 403

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV +YN++      +     AL ++ EM + G  PD ITYN+LI  LC+ G   EA  L
Sbjct: 404 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             DM++    P VI+Y+ +I GFCK  RI+ +  +   M ++   P+  T+  L+EG   
Sbjct: 464 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 523

Query: 487 GGWRAEAMELANALVS 502
            G   +A  L   +V+
Sbjct: 524 AGLVDDAERLLEEMVA 539



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 228/466 (48%), Gaps = 21/466 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +AG+ DE+    E M  N C+PDVV  T L+    +  +  +A +V+E +E
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363

Query: 100 -KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P+V  Y++LI G CK  Q+  A +V  R+  RG  P+VVTYN +I   C    ++
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 423

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SA  + +++    C P +ITY  LI                   G+CK G   +A +   
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLID------------------GLCKTGRAPEANRLFG 465

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++++ C PDVI+Y+ L+     + + +    L  +M+ + + P+VVT+S L+   C  G
Sbjct: 466 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 525

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +DA  +L        +PD Y+Y  L+  +CK GR+  A   L  M   GC P++V Y 
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 585

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LS 397
            ++ AFC+ G    A  + E++   G  PNV +Y ++      +GD   A  ++  +   
Sbjct: 586 ALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERD 645

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +  + D   Y  ++  LCR G +  A+ LL  ++ +   P    Y  +I G C+ + + +
Sbjct: 646 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 705

Query: 458 SIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++EVL  M   +  +PN   Y  +I+ +   G   EA  LA+ L+ 
Sbjct: 706 AMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 202/397 (50%), Gaps = 21/397 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V+ YN L     +A +I+    +L      G +P+V TY ++I  LC  G ++ A ++ 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           +++      P    Y  +I A                  +CK     +A  + RS+E   
Sbjct: 83  EEMRESGPVPDAAIYNFVIHA------------------LCKARNTAKALDYFRSME--- 121

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+ +VI++ +++  L    +  E      +M  +G  PN  TY++LI+  C+  K   A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L+  KE GL P+  +Y  +I  +C+  ++D A +    M+ +GC+P++V YNT+L+  
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+NG  D+A E+ +++ + G  P+  SY+T+ + L  +G    AL +  +  +    PD 
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           + Y++LI+ LC+ G +DEA  L   M      P V+++  ++ G CK  R+ E+ +VL  
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M ++ C PN  TY  LI+G+   G   +A E+   ++
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 160/379 (42%), Gaps = 90/379 (23%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+  ++    + M+  G +P+VV    LI  F      + A+ +ME + 
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN LI G CK  +   AN++   ++++  +PDV+TY+ +IG  C    I+
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD +L+    P V+T++ L++     G  D A +LL+EM                
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G + +A + ++ +  RGCQP+V++Y  L+      GK     +L+ EM+  G++
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQ 613

Query: 262 PNVVTYSILISS------------------------------------LCRDGKTEDAVD 285
           PNV+TY  LI                                      LCR G+   A++
Sbjct: 614 PNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 673

Query: 286 VLRAAKEKGLTP------------------------------------DAYSYDPLISAY 309
           +L A K+ G  P                                    +A +Y+ +I   
Sbjct: 674 LLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 733

Query: 310 CKDGRLDLAIEFLDYMISD 328
            ++GR + A    D ++ +
Sbjct: 734 AREGRHEEANALADELLGN 752



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 32/244 (13%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A+K++G   + Y+Y+ L  A  +  R+D     L      G  P++  Y  ++   CK+G
Sbjct: 14  ASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSG 73

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG------------------ 390
           + D+A E+ E++ + G  P+ + YN +  AL  + +  +AL                   
Sbjct: 74  DLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMI 133

Query: 391 --------------MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                           ++M  KG  P+E TYN LI+  C+   V  A  LL +M+ +   
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V++Y+ +I GFC+  +++ + ++   M E GC PN  TY  L+ G+   G   EA EL
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 497 ANAL 500
            + +
Sbjct: 254 LDEM 257


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 229/428 (53%), Gaps = 19/428 (4%)

Query: 75  CTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           C  L+  F +++K+ +A  + +  L     PD   Y+ LI+GFCKA   + A ++LD + 
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            RG  P    YN +I  LC  G ++SA   +  + R +C P+VITYTIL+ A     +  
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARIS 119

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            A  +L++M                 G CK G + +A      +    C PDV +YN+L+
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                  + ++G KL+ EM+  G EPN +TY+ L+ SL + GK  DA ++ +    +   
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P  ++++ +I  +CK G+LDLA E    M   GCLPDI  YN +++  C+    D A ++
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            E++++ GCPP+V +YN++ S L  +     A  +   + + G   D +T ++LI  LC+
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
              +D+A  LL +ME     P V++Y I+I GFCK  ++++S+   + M +KGC P   T
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 477 YVLLIEGI 484
           Y ++I+ +
Sbjct: 420 YSIVIDKL 427



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 223/445 (50%), Gaps = 19/445 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    R  K  E+    ++ +   C PD +  + LI  F + R   +A R+++ +EK G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P    YN +I G C   +++ A  V  R   R  +P V+TY I++ +LC    I  A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSA-LVHYRDMQRHCAPSVITYTILVDALCKSARISDAS 122

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + + ++   C P V+TY  LI      G  D+A+ L ++M                 G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+       + ++ +   GC+P+ I+YN L+ +L+  GK+ +   L   M+ R  +P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++++I   C+ G+ + A ++ +   ++G  PD Y+Y+ +IS  C+  R+D A + L+ 
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   GC PD+V YN+I++  CK    D+A E++E L + G   +V + +T+   L  S  
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ EM   G  PD + Y  LI   C+   +D+++    +M      PTVI+Y+I
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422

Query: 445 IILGFCKTRRINESIEVLAAMFEKG 469
           +I   CK+ R+ +   +L  M E+G
Sbjct: 423 VIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 172/356 (48%), Gaps = 19/356 (5%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N ++ +   +   + A+ +F   L   C P  ITY+ LI                   G 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLIN------------------GF 43

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK     QA++ +  +E RG  P    YN +++ L + G+ +       +M  R   P+V
Sbjct: 44  CKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSV 102

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+IL+ +LC+  +  DA  +L    E G  P+  +Y+ LI+ +CK G +D A+   + 
Sbjct: 103 ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 162

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+ + C PD+  YN ++  +CK        ++ +++   GC PN  +YNT+  +L  SG 
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 222

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            I A  +   ML +  +P   T+N +I   C+ G +D A  L   M      P + +YNI
Sbjct: 223 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 282

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +I G C+  RI+++ ++L  M E GC P+  TY  ++ G+       EA E+   L
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 338



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 176/359 (49%), Gaps = 19/359 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L+    ++ +  ++   +E M+  GC P+VV    LI  F +    ++AV +  ++LE  
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF YN LI G+CK  + +   K+L  +   G  P+ +TYN ++ SL   G    AF
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +   +LR +CKP+  T+ ++I                     CK G +  A++  + + 
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDM------------------FCKVGQLDLAYELFQLMT 269

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RGC PD+ +YN+++       + ++  +L+  M   G  P+VVTY+ ++S LC+  + +
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V    +  G   D  +   LI   CK  RLD A + L  M  +G  PD+V Y  ++
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
             FCK    D++L  F ++ D GC P V +Y+ +   L  S        ++  ML +G+
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+S+  R  K ++A D+ +       +PD+ +Y  LI+ +CK      A   LD M   G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P    YNTI+   C NG  D AL  +  +    C P+V +Y  +  AL  S     A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDAS 122

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M+  G  P+ +TYN+LI+  C+ G +DEAV L   M      P V +YNI+I G+
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           CK  R  +  ++L  M + GC+PN  TY  L++ +   G   +A  LA  ++      R 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML------RR 236

Query: 510 TFKRLNRTFPLL-DVYKEISHL 530
             K  + TF L+ D++ ++  L
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQL 258


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 254/509 (49%), Gaps = 55/509 (10%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG 102
           ++ + RA  F  ++  +  +   GC  DV  C  +++    +   ++AVR++ ++L  +G
Sbjct: 153 LEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG 212

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPDV +YNA++ G C A +      +++ + + G  P++VT++ +IG LC  G+ E   
Sbjct: 213 CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVH 272

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           +V  Q+    C P V  Y  +I                   G+CK+  +  A   +  + 
Sbjct: 273 EVHAQMAEHGCAPDVRMYATIID------------------GVCKEERLEVARGILNRMP 314

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S G  P+V+ YN LL+ L +  +WEE E L+ EM  +    + VT++IL+  LC++G  +
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI---------------------- 319
             ++VL    E G  PD  +Y  +I+ +CK+G +D A+                      
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434

Query: 320 -------------EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
                        E +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   GC 
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P++ SY+T+   L  +G+   AL +++ M+ KG+ P+ I Y+S+ S L  +G +++ + +
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             +++ T  R   + YN +I   CK    + +IE LA M   GC PNE+TY +LI G+  
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614

Query: 487 GGWRAEAMELANALVSMHAISRDTFKRLN 515
            G+  EA E+   L S  A+ +   K   
Sbjct: 615 EGFVKEAQEILTELCSKGALRKHLMKHFG 643



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 216/406 (53%), Gaps = 21/406 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNA+++G+C+A Q+  A ++     S   +P+  TY  ++ +LC+RG I  A  V D + 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLA---ASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R  C PT   Y + ++A         A+ +L ++                  +C +G V 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 212 QAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           +A + +R L  S GC+PDV+SYN +LR L    +W   + LM EM++ G  PN+VT+S L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR+G  E   +V     E G  PD   Y  +I   CK+ RL++A   L+ M S G 
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V YNT+L   C     ++A  +  ++ D  CP +  ++N +   L  +G   R + 
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ +ML  G  PD ITY ++I+  C++G++DEAV LL  M +   RP  +SY I++ G C
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              R  ++ E+++ M ++GC PN  T+  LI  +   G   +A+EL
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 484



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 208/394 (52%), Gaps = 19/394 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G F+        M  +GC PDV M   +I    +E +   A  ++  + 
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG  P+V  YN L+ G C A++ E A  +L  +  +    D VT+NI++  LC  G+++
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              +V +Q+L   C P VITYT +I                   G CK+G++ +A   +R
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVIN------------------GFCKEGLIDEAVMLLR 416

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S+ + GC+P+ +SY ++L+ L +  +W + E+LM++MI +G  PN VT++ LI+ LC+ G
Sbjct: 417 SMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 476

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             E A+++L+     G +PD  SY  +I    K G  D A+E L+ M+  G  P+ + Y+
Sbjct: 477 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYS 536

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I +A    G  ++ +++FE + D     +   YN + S+L   G+  RA+  ++ M+S 
Sbjct: 537 SIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           G  P+E TY  LI  L  +G V EA  +L ++ S
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCS 630



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 34/265 (12%)

Query: 268 SILISSLCRDGKTED--------------------AVDVLRAAKEKG---------LTPD 298
           S LI SLC  G+T +                         RA +            + P+
Sbjct: 51  SALIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLAAARRLAASVPVAPN 110

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           AY+Y PL+ A C  GR+  A+  LD M   GC P    Y+  L A C+      A+ +  
Sbjct: 111 AYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLR 170

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCLCRD 417
            L   GC  +V + N +  A+   G    A+ ++ ++L S G EPD ++YN+++  LC  
Sbjct: 171 DLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMA 230

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
                   L+ +M +    P +++++ +I   C+        EV A M E GC P+   Y
Sbjct: 231 RRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMY 290

Query: 478 VLLIEGIGYGGWRAEAMELANALVS 502
             +I+G+     + E +E+A  +++
Sbjct: 291 ATIIDGV----CKEERLEVARGILN 311



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  ++++  ++ M+ NGC PD++  + +I    +   +++A+ ++ ++ 
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   Y+++ S      +I    ++ + ++      D V YN +I SLC RG  +
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            A +    ++   C P   TYTILI+    EG   +A ++L E  +C KG
Sbjct: 585 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTE--LCSKG 632


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 239/450 (53%), Gaps = 22/450 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNAL 112
           D +   +  M  +GC P+ V+   LI    +  + ++A++++E +     EPDV  +N +
Sbjct: 222 DSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDV 281

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G C+A +I  A K+LDR+  RGFS D +TY  ++  LC  G ++ A  + +++     
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP---- 337

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P  + Y  LI   +  G+ ++A  LL                   ++   G +PD  ++
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLL-----------------YNNMVIAGYEPDAYTF 380

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+++  L+  G      +L+ EM+++  EPNV+TY+ILI+  C+ G+ E+A +++ +   
Sbjct: 381 NIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSA 440

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL+ +   Y+ LI A CKDG ++ A++    M   GC PDI  +N+++   CKN   ++
Sbjct: 441 KGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEE 500

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL ++  +   G   N  +YNT+  A        +A  ++ EML +G   D ITYN LI 
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIK 560

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+ G V++ +GL  +M      PT+IS NI+I G C+T ++N++++ L  M  +G  P
Sbjct: 561 ALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  TY  LI G+   G   EA  L N L S
Sbjct: 621 DIVTYNSLINGLCKMGHVQEASNLFNKLQS 650



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 212/452 (46%), Gaps = 56/452 (12%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  RVS + +   +  L+  +     F  +I    RAG+  E+   ++ M+  G   D +
Sbjct: 252 ENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDAL 311

Query: 74  MCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL-DRL 132
               L+    +  + ++A     +L K   P+   YN LISG+  + + E A  +L + +
Sbjct: 312 TYGYLMHGLCRMGQVDEA---RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNM 368

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
              G+ PD  T+NIMI  L  +G + SA ++ ++++    +P VITYTILI     +G+ 
Sbjct: 369 VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           ++A ++++ M                  +CK G + +A Q    +  +GC+PD+ ++N L
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488

Query: 236 LRTLLNMGKWEEGE-----------------------------------KLMTEMISRGL 260
           +  L    K EE                                     KL+ EM+ RG 
Sbjct: 489 INGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             + +TY+ LI +LC+ G  E  + +      KG+ P   S + LIS  C+ G+++ A++
Sbjct: 549 PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALK 608

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           FL  MI  G  PDIV YN+++   CK G+  +A  +F KL   G  P+  +YNT+ S   
Sbjct: 609 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
             G    A  ++ + +  G  P+E+T++ LI+
Sbjct: 669 HEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 33/324 (10%)

Query: 206 KKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           K G+ GQA + +  +     C P   SYN++L  L++         +  +M+SRG+ P V
Sbjct: 146 KAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTV 205

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T+ +++ +LC   + + A  +LR   + G  P++  Y  LI A C++ R+  A++ L+ 
Sbjct: 206 YTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLED 265

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP------------------ 366
           M    C PD+  +N ++   C+ G   +A ++ +++   G                    
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325

Query: 367 -------------PNVSSYNTMFSALWSSGDKIRALGMI-SEMLSKGIEPDEITYNSLIS 412
                        PN   YNT+ S   +SG    A  ++ + M+  G EPD  T+N +I 
Sbjct: 326 VDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMID 385

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            L + G +  A+ LL +M + RF P VI+Y I+I GFCK  R+ E+ E++ +M  KG   
Sbjct: 386 GLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSL 445

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
           N   Y  LI  +   G   EA++L
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQL 469



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 5/243 (2%)

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P   +Y++++  L        A +V      +G++P  Y++  ++ A C    +D A  
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M   GC+P+ V Y T++ A C+N    +AL++ E +  + C P+V ++N +   L 
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G    A  ++  ML +G   D +TY  L+  LCR G VDEA  LL  + +    P  +
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTV 342

Query: 441 SYNIIILGFCKTRRINESIEVL-AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            YN +I G+  + R  E+ ++L   M   G +P+  T+ ++I+G+   G+   A+EL N 
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNE 402

Query: 500 LVS 502
           +V+
Sbjct: 403 MVA 405



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 1/244 (0%)

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DYMIS 327
           +LI  L   G  +    +L+  K++GL      +  ++  Y K G    A   L D    
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C P   +YN +L           A  +F  +   G  P V ++  +  AL    +   
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  ++ +M   G  P+ + Y +LI  LC +  V EA+ LL DM      P V ++N +I 
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           G C+  RI+E+ ++L  M  +G   +  TY  L+ G+   G   EA  L N + + + + 
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVL 343

Query: 508 RDTF 511
            +T 
Sbjct: 344 YNTL 347



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    R GK +++L F++ M+  G  PD+V    LI    +     +A  +   L+  G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
             PD   YN LIS  C       A  +L +    GF P+ VT++I+I  +  +
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 242/447 (54%), Gaps = 21/447 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDV 106
           R  +   +L  +  M+  G +PD+V  + L+  +   ++ ++AV +++   + +Y +P+ 
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY-QPNT 185

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N LI G    N+   A  ++DR+ +RG  PD+ TY  ++  LC RG I+ A  +  +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + +   +  V+ YT +I A                  +C    V  A      ++++G +
Sbjct: 246 MEKGKIEADVVIYTTIIDA------------------LCNYKNVNDALNLFTEMDNKGIR 287

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++YN L+R L N G+W +  +L+++MI R + PNVVT+S LI +  ++GK  +A  +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++ + PD ++Y  LI+ +C   RLD A    + MIS  C P++V YNT++  FCK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               ++ +E+F ++S  G   N  +YNT+   L+ +GD   A  +  +M+S G+ PD IT
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L+  LC+ G +++A+ +   ++ ++  P + +YNI+I G CK  ++ +  ++  ++ 
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEA 493
            KG KPN   Y  +I G    G + EA
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEA 554



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 225/481 (46%), Gaps = 19/481 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S +        ++ +      F  LI   F   K  E++  I+ MVA GC+PD+    
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            ++    +    + A+ +++ +EK   E DV  Y  +I   C    +  A  +   + ++
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+VVTYN +I  LC+ G    A ++   ++     P V+T++ LI A + EG+  +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
            KL DEM                    R   PD+ +Y+ L+       + +E + +   M
Sbjct: 345 EKLYDEM------------------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           IS+   PNVVTY+ LI   C+  + E+ +++ R   ++GL  +  +Y+ LI    + G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D+A +    M+SDG  PDI+ Y+ +L   CK G  ++AL +FE L      P++ +YN M
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              +  +G       +   +  KG++P+ I Y ++IS  CR G+ +EA  L  +M+    
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P   +YN +I    +      S E++  M   G   + +T  ++I  +  G      +E
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626

Query: 496 L 496
           +
Sbjct: 627 M 627



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 210/427 (49%), Gaps = 19/427 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL +    + K + AV +  E+++    P +  +N L+S   K N+ +L   + +R+++ 
Sbjct: 50  KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
             S D+ +YNI+I   C R  +  A  V  ++++   +P ++T + L+       +  +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           + L+D+M             FV        QP+ +++N L+  L    K  E   L+  M
Sbjct: 170 VALVDQM-------------FVMEY-----QPNTVTFNTLIHGLFLHNKASEAVALIDRM 211

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           ++RG +P++ TY  +++ LC+ G  + A+ +L+  ++  +  D   Y  +I A C    +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + A+     M + G  P++V YN+++   C  G    A  +   + +    PNV +++ +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             A    G  + A  +  EM+ + I+PD  TY+SLI+  C    +DEA  +   M S   
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V++YN +I GFCK +R+ E +E+   M ++G   N  TY  LI+G+   G    A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 496 LANALVS 502
           +   +VS
Sbjct: 452 IFKKMVS 458



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+     P  + +N L+S + +    D  + L   M++ R    + SYNI+I 
Sbjct: 64  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            FC+  ++  ++ VL  M + G +P+  T   L+ G  +G   +EA+ L + +  M 
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 148/454 (32%), Positives = 232/454 (51%), Gaps = 61/454 (13%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  YN +I+G CK+N +    ++ + L  RG  PDVVTYN +I SLC  G +E A ++
Sbjct: 35  PTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 94

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GM 204
              +    C P V+TY++LI      G+ D+A +L+ EM                   G+
Sbjct: 95  HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154

Query: 205 CKKGMVGQAFQFVRSLE--SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK+ M  +A + +RSL   S    PD ++++ L+  L   G+ +E   +  +MI+ G  P
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+TY+ L++ LC+  K E A  ++ +  +KG+TPD  +Y  L+ A+CK  R+D A+E L
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274

Query: 323 DYMISDGC-----LPDIVNYNTILAAFCKNGNADQALEIFEKL----------------- 360
             M S GC     +PD V +N ++A  CK GN +QA  +FE++                 
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334

Query: 361 ------------------SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
                              ++G PPNV +YN +   L  SG    A   + EM+S G  P
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITY SL+  LCR    D+A+ L+ +++S  + P  ++YNI++ G  K+ +  ++I VL
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M  KG +P+  T+     G+   G  A  MEL
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMEL 488



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 216/425 (50%), Gaps = 28/425 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           LI    + G+ DE+   I+ M    C   P+++     +    ++  + +A  +M  L  
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172

Query: 101 YG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 PD   ++ LI G CK  QI+ A  V D + + G+ P+V+TYN ++  LC    +
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A  + + ++     P VITY++L+ A                   CK   V +A + +
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDA------------------FCKASRVDEALELL 274

Query: 218 RSLESRGCQPDV-----ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             + SRGC P+V     +++N+L+      G +E+   L  EM+++ L+P+V+T+  LI 
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G+ E A D+L      G+ P+  +Y+ L+   CK GR++ A +FL+ M+S GC+P
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D + Y +++ A C+    D AL++  +L   G  P+  +YN +   LW SG   +A+ ++
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG +PD  T+ +  S L R G +   + LL  + +    P   + + I+   C++
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRS 514

Query: 453 RRINE 457
            ++++
Sbjct: 515 GKLDD 519



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 208/424 (49%), Gaps = 62/424 (14%)

Query: 141 VVTYNIMIGSLCSRGMIESAFKVF-DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           V  YNI++ SLC  G    A ++F  ++ RD   PT++TY  +I            M+L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           +E+                  +CK G + +A +    + SRGC P+V++Y++L+  L  +
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 243 GKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL--TPD 298
           G+ +E  +L+ EM  +  +  PN++TY+  +  LC+   T +A +++R+ ++  L  +PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA---------------- 342
             ++  LI   CK G++D A    D MI+ G +P+++ YN ++                 
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 343 -------------------AFCKNGNADQALEIFEKLSDVGCPPNV-----SSYNTMFSA 378
                              AFCK    D+ALE+   ++  GC PNV      ++N + + 
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
              +G+  +A  +  EM++K ++PD +T+ +LI  LC+ G V+ A  +L  M +    P 
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++YN ++ G CK+ RI E+ + L  M   GC P+  TY  L+  +       +A++L +
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 499 ALVS 502
            L S
Sbjct: 421 ELKS 424



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 23/335 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + G+ DE+    + M+A G  P+V+    L+    +  K  +A  ++E ++
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV-----VTYNIMIGSLCS 153
           +K   PDV  Y+ L+  FCKA++++ A ++L  + SRG +P+V     VT+NI+I   C 
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G  E A  +F++++  N +P V+T+  LI      GQ + A  +LD M           
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G + +A QF+  + S GC PD I+Y  L+  L    + ++  +L++E+ 
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S G +P+ VTY+IL+  L + GKTE A+ VL     KG  PD++++    S   + G L 
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             +E L  +++ G LPD    ++IL   C++G  D
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     +  ++D  L   + M   G   ++   + +I  F + RK   A   M  + 
Sbjct: 91  FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP+   ++ LI+G C   ++  A +++DR+   G  PD++T N ++  LC  G   
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++   C+P  +TY  ++      GQT  AM+LL +M                
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G +  AF     +E +G   ++I+YN+L+    N G+W++G KL+ +MI R + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNVVT+S+LI S  ++GK  +A ++ +    +G+ PD  +Y  LI  +CK+  LD A + 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +D M+S GC P+I  +N ++  +CK    D  LE+F K+S  G   +  +YNT+      
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +  EM+S+ + P+ +TY  L+  LC +G  ++A+ +   +E ++    +  
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           YNIII G C   +++++ ++  ++  KG KP   TY ++I G+   G  +EA
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  ++ L S   K  Q +L   +  ++  +G + ++ T +IMI   C    +  AF  
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P  IT++ LI    LEG+  +A++L+D M                     
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM------------------VEM 187

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD+I+ N L+  L   GK  E   L+ +M+  G +PN VTY  +++ +C+ G+T  A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++LR  +E+ +  DA  Y  +I   CK G LD A    + M   G   +I+ YN ++  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G  D   ++   +      PNV +++ +  +    G    A  +  EM+ +GI PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY SLI   C++  +D+A  ++  M S    P + ++NI+I G+CK  RI++ +E+  
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G    G    A EL   +VS
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 19/345 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           AG++D+    +  M+     P+VV  + LI  F +E K  +A  +  E++ +   PD   
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y +LI GFCK N ++ AN+++D + S+G  P++ T+NI+I   C    I+   ++F ++ 
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                   +TY  LIQ                  G C+ G +  A +  + + SR   P+
Sbjct: 431 LRGVVADTVTYNTLIQ------------------GFCELGKLNVAKELFQEMVSRKVPPN 472

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++Y +LL  L + G+ E+  ++  ++    +E ++  Y+I+I  +C   K +DA D+  
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           +   KG+ P   +Y+ +I   CK G L  A      M  DG  PD   YN ++ A   +G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +A +++++ E+L   G   + S+   +   L     K   L M+S
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 155/308 (50%), Gaps = 8/308 (2%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR+ L   K ++   L  +MI     P V+ +S L S++ +  + +  + + + 
Sbjct: 54  LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + KG+  + Y+   +I+ +C+  +L LA   +  +I  G  P+ + ++T++   C  G 
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +ALE+ +++ ++G  P++ + NT+ + L  SG +  A+ +I +M+  G +P+ +TY  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ +C+ G    A+ LL  ME    +   + Y+III G CK   ++ +  +   M  KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293

Query: 470 CKPNETTYVLLIEGIGYGG-WRAEAMELANAL-------VSMHAISRDTFKRLNRTFPLL 521
              N  TY +LI G    G W   A  L + +       V   ++  D+F +  +     
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 522 DVYKEISH 529
           +++KE+ H
Sbjct: 354 ELHKEMIH 361


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 242/447 (54%), Gaps = 21/447 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDV 106
           R  +   +L  +  M+  G +PD+V  + L+  +   ++ ++AV +++   + +Y +P+ 
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY-QPNT 169

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N LI G    N+   A  ++DR+ +RG  PD+ TY  ++  LC RG I+ A  +  +
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + +   +  V+ YT +I A                  +C    V  A      ++++G +
Sbjct: 230 MEKGKIEADVVIYTTIIDA------------------LCNYKNVNDALNLFTEMDNKGIR 271

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++YN L+R L N G+W +  +L+++MI R + PNVVT+S LI +  ++GK  +A  +
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++ + PD ++Y  LI+ +C   RLD A    + MIS  C P++V YNT++  FCK
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               ++ +E+F ++S  G   N  +YNT+   L+ +GD   A  +  +M+S G+ PD IT
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L+  LC+ G +++A+ +   ++ ++  P + +YNI+I G CK  ++ +  ++  ++ 
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEA 493
            KG KPN   Y  +I G    G + EA
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEA 538



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 225/481 (46%), Gaps = 19/481 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S +        ++ +      F  LI   F   K  E++  I+ MVA GC+PD+    
Sbjct: 149 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 208

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            ++    +    + A+ +++ +EK   E DV  Y  +I   C    +  A  +   + ++
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+VVTYN +I  LC+ G    A ++   ++     P V+T++ LI A + EG+  +A
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 328

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
            KL DEM                    R   PD+ +Y+ L+       + +E + +   M
Sbjct: 329 EKLYDEM------------------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           IS+   PNVVTY+ LI   C+  + E+ +++ R   ++GL  +  +Y+ LI    + G  
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D+A +    M+SDG  PDI+ Y+ +L   CK G  ++AL +FE L      P++ +YN M
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              +  +G       +   +  KG++P+ I Y ++IS  CR G+ +EA  L  +M+    
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P   +YN +I    +      S E++  M   G   + +T  ++I  +  G      +E
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 610

Query: 496 L 496
           +
Sbjct: 611 M 611



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 210/427 (49%), Gaps = 19/427 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL +    + K + AV +  E+++    P +  +N L+S   K N+ +L   + +R+++ 
Sbjct: 34  KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 93

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
             S D+ +YNI+I   C R  +  A  V  ++++   +P ++T + L+       +  +A
Sbjct: 94  RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 153

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           + L+D+M             FV        QP+ +++N L+  L    K  E   L+  M
Sbjct: 154 VALVDQM-------------FVMEY-----QPNTVTFNTLIHGLFLHNKASEAVALIDRM 195

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           ++RG +P++ TY  +++ LC+ G  + A+ +L+  ++  +  D   Y  +I A C    +
Sbjct: 196 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 255

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + A+     M + G  P++V YN+++   C  G    A  +   + +    PNV +++ +
Sbjct: 256 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 315

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             A    G  + A  +  EM+ + I+PD  TY+SLI+  C    +DEA  +   M S   
Sbjct: 316 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 375

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V++YN +I GFCK +R+ E +E+   M ++G   N  TY  LI+G+   G    A +
Sbjct: 376 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 435

Query: 496 LANALVS 502
           +   +VS
Sbjct: 436 IFKKMVS 442



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+     P  + +N L+S + +    D  + L   M++ R    + SYNI+I 
Sbjct: 48  AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            FC+  ++  ++ VL  M + G +P+  T   L+ G  +G   +EA+ L + +  M 
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     +  ++D  L   + M   G   ++   + +I  F + RK   A   M  + 
Sbjct: 189 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 248

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP+   ++ LI+G C   ++  A +++DR+   G  PD++T N ++  LC  G   
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++   C+P  +TY  ++      GQT  AM+LL +M                
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G +  AF     +E +G   ++I+YN+L+    N G+W++G KL+ +MI R + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNVVT+S+LI S  ++GK  +A ++ +    +G+ PD  +Y  LI  +CK+  LD A + 
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +D M+S GC P+I  +N ++  +CK    D  LE+F K+S  G   +  +YNT+      
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +  EM+S+ + P+ +TY  L+  LC +G  ++A+ +   +E ++    +  
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           YNIII G C   +++++ ++  ++  KG KP   TY ++I G+   G  +EA
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  ++ L S   K  Q +L   +  ++  +G + ++ T +IMI   C    +  AF  
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P  IT++ LI    LEG+  +A++L+D M                     
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM------------------VEM 285

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD+I+ N L+  L   GK  E   L+ +M+  G +PN VTY  +++ +C+ G+T  A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++LR  +E+ +  DA  Y  +I   CK G LD A    + M   G   +I+ YN ++  
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G  D   ++   +      PNV +++ +  +    G    A  +  EM+ +GI PD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY SLI   C++  +D+A  ++  M S    P + ++NI+I G+CK  RI++ +E+  
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G    G    A EL   +VS
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 194/424 (45%), Gaps = 59/424 (13%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP----D 105
           +GK  E++  I+ MV  GC+P+ V    ++       KS +    ME+L K  E     D
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC---KSGQTALAMELLRKMEERNIKLD 360

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              Y+ +I G CK   ++ A  + + +  +G + +++TYNI+IG  C+ G  +   K+  
Sbjct: 361 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 420

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            +++    P V+T+++LI + + EG+  +A +L  EM                 G CK+ 
Sbjct: 421 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 480

Query: 209 MVGQAFQFVRSLESRGCQP-----------------------------------DVISYN 233
            + +A Q V  + S+GC P                                   D ++YN
Sbjct: 481 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 540

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L++    +GK    ++L  EM+SR + PN+VTY IL+  LC +G++E A+++    ++ 
Sbjct: 541 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 600

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            +  D   Y+ +I   C   ++D A +    +   G  P +  YN ++   CK G   +A
Sbjct: 601 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +F K+ + G  P+  +YN +  A    GD  +++ +I E+   G   D  T   +I  
Sbjct: 661 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 720

Query: 414 LCRD 417
           L  D
Sbjct: 721 LSDD 724



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  +M+     P  I ++ L S + +    D  + L   ME       + + +I+I 
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+ R++  +   +  + + G +PN  T+  LI G+   G  +EA+EL + +V M
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 221/400 (55%), Gaps = 21/400 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EPDV +YN +ISGFC A  +  A ++L+ ++S GF+PD  T+  +I ++ + G ++ A  
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA-- 166

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
             D L    C P V+TYT LI A     + ++AMKLL+EM                  +C
Sbjct: 167 -MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K  MVG A   V+ +   G  P+V+++N L+      G  ++  KL+  M+++G+ PNVV
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS LI  LC+  K  +A +VL   K +G+TPDA++Y  LI   CK  +++ A + L  M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC PD+V Y++I+ AFCK+G   +A +  +++      P+V +YNT+   L   G  
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405

Query: 386 IRALGMISEMLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             A  ++ +M   G + PD +TY+++I+ LC+  M+ EA  LL  M      P V++Y  
Sbjct: 406 AEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           II G CK  R+ E+  +L  M   GC PN  TY  LI G+
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 505



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 226/437 (51%), Gaps = 24/437 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  D ++  + SM   GC P+VV  T LI  F + +K  +A++++E + + G  P++  
Sbjct: 160 AGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVT 216

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L+   CK + +  A  V+ ++   GF+P+V+T+N ++   C RG ++ A K+   ++
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 276

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P V+TY+ LI       +  +A ++L+EM                 G+CK   + 
Sbjct: 277 AKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIE 336

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A Q +R +   GC PDV+ Y+ ++      GK  E +K + EM  +   P+VVTY+ +I
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 396

Query: 272 SSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
             LC+ GK  +A  +L   +E G + PD  +Y  +I+  CK   L  A + LD M   GC
Sbjct: 397 DGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V Y TI+   CK G  ++A  + + +   GC PNV +Y T+ S L  +     A  
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR--PTVISYNIIILG 448
           ++ EM + G  P+ +TYN++++ LC  G + EA  L+  M+  R    P   +Y  I+  
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 449 FCKTRRINESIEVLAAM 465
              +  + E+ ++L  M
Sbjct: 577 LMSSDLVQEAEQLLEQM 593



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 24/392 (6%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F++N+L+    +  +   A  +          PDV +YNI+I   C+ G + +A ++ ++
Sbjct: 78  FSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEE 137

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P   T+T +I A    G  D AM                       L S GC 
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMD---------------------HLRSMGCD 176

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++Y  L+       K EE  KL+ EM  RG  PN+VTY++L+ +LC+      A DV
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           ++   E G  P+  +++ L+  +CK G +D A + L  M++ G  P++V Y+ ++   CK
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI-RALGMISEMLSKGIEPDEI 405
           +    +A E+ E++   G  P+  +Y+ +   L  + DKI  A  M+  M   G  PD +
Sbjct: 297 SQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKA-DKIEEAEQMLRRMAGSGCTPDVV 355

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+S+I   C+ G + EA   L +M   R  P V++YN +I G CK  +I E+  +L  M
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415

Query: 466 FEKG-CKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E G   P+  TY  +I G+       EA +L
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 447



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 175/343 (51%), Gaps = 23/343 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + G  D++   +  MVA G +P+VV  + LI    + +K  +A  V+E ++
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD F Y+ALI G CKA++IE A ++L R+   G +PDVV Y+ +I + C  G + 
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K   ++ +    P V+TY  +I      G+  +A  +L++M                
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK  M+ +A + +  +   GC PDV++Y  ++  L   G+ EE E L+  M   G 
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVVTY+ LIS LC+  K ++A  V+   +  G  P+  +Y+ +++  C  GR+  A +
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 551

Query: 321 FLDYMISDG---CLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            +  M  DG   C PD   Y TI+ A   +    +A ++ E++
Sbjct: 552 LVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 15/299 (5%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S+N LL+ L+   K  E   L    +    EP+V +Y+I+IS  C  G    A+++L   
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K  G  PDA+++ P+I+A    G LD A   +D++ S GC P++V Y  ++AAF +    
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++A+++ E++ + GCPPN+ +YN +  AL        A  ++ +M+  G  P+ +T+NSL
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +   C+ G VD+A  LL  M +   RP V++Y+ +I G CK+++  E+ EVL  M  +G 
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
            P+  TY  LI G+     +A+ +E A  ++   A S  T        P + VY  I H
Sbjct: 316 TPDAFTYSALIHGL----CKADKIEEAEQMLRRMAGSGCT--------PDVVVYSSIIH 362


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 245/461 (53%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D++L     MV    +P VV   K +    ++++ + AV +   ++ +G   +V++ N L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+  C+ + ++ A  V+ ++   G  PD +T+N +I  LC+ G I+ A  +F++++    
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P VI+Y  +I      G T  A+++  +M                  +CK  +V +A +
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +  RG  PDV++YN +L    ++G+  E  +L  EM+ R + P+ VT++IL+  LC
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G   +A  V     EKG  P+AY+Y+ L+  YC   ++D AI+ L  MI  GC P++ 
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN ++  +CK+   ++A  +  ++S+    P+  +Y+T+   L   G    AL +  EM
Sbjct: 378 SYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEM 437

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G+ PD + Y+ L+   C+ G +DEA+ LL +M   R +P +I Y I+I G     ++
Sbjct: 438 CSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKL 497

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + E+ + +   G +P+  TY ++I+G+   G   EA E 
Sbjct: 498 EVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEF 538



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 229/444 (51%), Gaps = 19/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK  E++     MV +G +P+V+    +I    +   +  AVRV   +E
Sbjct: 169 FNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKME 228

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +  G+P+V  YN +I   CK   +  A + L  +  RG  PDVVTYN ++   CS G + 
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F +++  N  P  +T+ IL+                   G+CK+GMV +A     
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVD------------------GLCKEGMVSEARCVSE 330

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++  +G +P+  +YN L+       + +E  K++  MI +G  PN+ +Y+ILI+  C+  
Sbjct: 331 TMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK 390

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A  +L    EK LTPD  +Y  L+   C+ GR   A+     M S G LPD++ Y+
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FCK+G+ D+AL++ +++ +    PN+  Y  +   ++ +G    A  + S++ + 
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI PD  TYN +I  L ++G+ DEA      ME   F P   SYN+II GF + +  + +
Sbjct: 511 GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I+++  M  K    + +T+ +L++
Sbjct: 571 IQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 189/363 (52%), Gaps = 17/363 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------ 204
           I+ A   F +++R N +P+V+ +   + +   + Q   A+ L ++M +            
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V  A   +  +   G QPD I++N L+  L N GK +E   L  EM+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            EPNV++Y+ +I+ LC++G T  AV V R  ++    P+  +Y+ +I + CKD  ++ A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           EFL  M+  G  PD+V YNTIL  FC  G  ++A  +F+++      P+  ++N +   L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  +   M  KG EP+  TYN+L+   C    +DEA+ +L  M      P +
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI+I G+CK++R+NE+  +L+ M EK   P+  TY  L++G+   G   EA+ L   
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 500 LVS 502
           + S
Sbjct: 437 MCS 439



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 184/376 (48%), Gaps = 18/376 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M  N  KP+VV    +I    ++R  N+AV  + E++++   PDV  YN ++ GFC   Q
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A ++   +  R   PD VT+NI++  LC  GM+  A  V + +     +P   TY  
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           L+    L  Q D+A+K+L  M                 G CK   + +A + +  +  + 
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PD ++Y+ L++ L  +G+  E   L  EM S GL P+++ YSIL+   C+ G  ++A+
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L+   E+ + P+   Y  LI      G+L++A E    + +DG  PDI  YN ++   
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K G +D+A E F K+ D G  P+  SYN +      + D   A+ +I EM+ K    D 
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADS 586

Query: 405 ITYNSLISCLCRDGMV 420
            T+  L+     D ++
Sbjct: 587 STFQMLLDLESHDEII 602



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 114/230 (49%)

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S+   D   +DA+            P    +   + +  K  +   A+   + M   G  
Sbjct: 69  SNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVT 128

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            ++ + N ++   C+  + D A+ +  K+  +G  P+  ++NT+ + L + G    A+G+
Sbjct: 129 HNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            +EM+  G EP+ I+YN++I+ LC++G    AV +   ME  R +P V++YN II   CK
Sbjct: 189 FNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK 248

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            R +NE++E L+ M ++G  P+  TY  ++ G    G   EA  L   +V
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 224/450 (49%), Gaps = 18/450 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PD      LI    +  K N A  + + L   G  P   AY +LI G C AN  + A ++
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +  RG  P  VTYN++I + C RGM+E A  +  +++ D   P V+TY  ++     
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G+ ++A+ L +EM                 G+C++  + QA Q    +E+R   PD  S
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y +L+  L   GK  E  KL   M+  G+ P+ VTY+++I  +C     ++A+++ ++ +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG  P  ++++ LI A+CK G++D A   L  M  DG +PD+V Y+T+++  C     D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  + E +    C P V + NT+   L  +G    A  ++  M+S G  PD +TYN+L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR G  + A  LL DM +    P V++Y  ++ G CK  R+ E+  V A M   GC 
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY  LI G    G     ++L   +V
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMV 457



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 199/404 (49%), Gaps = 18/404 (4%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PD ++Y  LI G  KA ++  A  +  +L   G +P  V Y  +I  LC     +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F  + R  C P+ +TY ++I A+                  CK+GM+ +A   ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDAS------------------CKRGMLEEACDLIK 104

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G  PDV++YN ++  L   G+ EE   L  EM   G  PN  +++ +I  LC+  
Sbjct: 105 KMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 164

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K + A  V    + + + PD++SY  LI    K G+L+ A +    M+  G  P  V YN
Sbjct: 165 KIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   C     D+ALE+F+ +   GC P+  ++N +  A    G    A  ++  M   
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD 284

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY++LIS LC    VD+A  LL DM   + +PTV++ N +I G CK  RI E+
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            EVL AM   G  P+  TY  L+ G    G    A EL + +V+
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 209/421 (49%), Gaps = 19/421 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I  S + G  +E+   I+ M+ +G  PDVV    ++    +  +  +A+ +   +E+ G
Sbjct: 86  IIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLG 145

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+  ++N +I G C+ ++I+ A +V   + +R   PD  +Y I+I  L   G +  A+
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           K+F ++L     P+ +TY ++I                   GMC    + +A +  +S+ 
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIH------------------GMCLAYTLDEALELFKSMR 247

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S+GC+P   ++N+L+      GK +E  +L+  M   G  P+VVTYS LIS LC   + +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA  +L    ++   P   + + LI   CK GR+  A E LD M+S G  PD+V YNT++
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C+ G  ++A E+   +   G  PNV +Y  + S L  +     A G+ ++M S G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+  TY +LI   C  G VD  + L  +M      P  + Y  +    CK+ R   ++E+
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 462 L 462
           L
Sbjct: 488 L 488



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 211/444 (47%), Gaps = 30/444 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+ +E+L     M   GC P+      +I    Q+ K ++A +V   +E     PD +
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  LI G  KA ++  A K+  R+   G +P  VTYN++I  +C    ++ A ++F  +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C+P+  T+ ILI A    G+ D+A +LL  M                 G+C    V
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +  +  R C+P V++ N L+  L   G+ +E  +++  M+S G  P+VVTY+ L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   CR G+TE A ++L     +GL P+  +Y  L+S  CK  RL  A      M S GC
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++  Y  ++  FC  G  D  L++F ++   G  P+   Y T+ + L  SG   RAL 
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL- 485

Query: 391 MISEMLSKGIEP-------DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              E+L +G E        DE+ Y   +  L   G ++ A+G + DM      P      
Sbjct: 486 ---EILREGRESLRSEAWGDEV-YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCA 541

Query: 444 IIILGFCKTRRINESIEVLAAMFE 467
            ++ G CK+ +  E+  VL  + +
Sbjct: 542 SLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 147/277 (53%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  R   PD  SY +L+  L   GK  +   L  +++  G+ P+ V Y+ LI  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA ++      +G  P   +Y+ +I A CK G L+ A + +  MI DG +PD+V YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK+G  ++AL +F ++  +GC PN  S+NT+   L       +A  +  EM ++ 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I PD  +Y  LI  L + G ++EA  L   M  +   P+ ++YN++I G C    ++E++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           E+  +M  KGC+P+  T+ +LI+     G   EA  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRL 277



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 182/379 (48%), Gaps = 38/379 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + GK DE+   ++ M  +G  PDVV  + LI       + + A  ++E ++
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++  +P V   N LI G CKA +I+ A +VLD + S G SPDVVTYN ++   C  G  E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++     P V+TYT L+                   G+CK   + +A     
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVS------------------GLCKANRLPEACGVFA 419

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++S GC P++ +Y  L+    + G+ + G KL  EM+  G+ P+ V Y  L + LC+ G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 279 KTEDAVDVLRAAKEKGLTPDAYS---YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++  A+++LR  +E  L  +A+    Y   +      G++++A+ F+  M+  G LP   
Sbjct: 480 RSARALEILREGRES-LRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPE 538

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
              +++A  CK+G   +A  + E++ D+                +    + +A   + EM
Sbjct: 539 RCASLVAGLCKSGQGGEARAVLEEIMDLA---------------YGGKARGKAAKFVEEM 583

Query: 396 LSKGIEPDEITYNSLISCL 414
           + KG E ++     L+S L
Sbjct: 584 VGKGYEIEDGVLKPLLSTL 602



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 127/248 (51%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  R + P+  +Y ILI  L + GK  DA D+ +     G+TP   +Y  LI   C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D A E    M   GC P  V YN I+ A CK G  ++A ++ +K+ + G  P+V +YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  SG    AL + +EM   G  P+  ++N++I  LC+   +D+A  +  +ME+  
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P   SY I+I G  K  ++NE+ ++   M + G  P+  TY ++I G+       EA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 495 ELANALVS 502
           EL  ++ S
Sbjct: 241 ELFKSMRS 248


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 242/437 (55%), Gaps = 26/437 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G+  ++    E M+  G  PDVV    L+  F +  + ++A+++ +   K G  PDV  
Sbjct: 23  GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVT 82

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNALI+GFCKA++++ A ++L R+ S    PDVVTYN ++  LC  G ++ A  +   ++
Sbjct: 83  YNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IV 139

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK-GMVGQAFQFVRSLESRGCQP 227
                P VITY+ LI                   G+C++   V +A +   S+  +G +P
Sbjct: 140 DKGFSPNVITYSTLIS------------------GLCRELRGVSEALKLFGSVLKQGYEP 181

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V +YN+L+  LL   +  E  +L + ++  GLEP+ +TY++ I  LC+ G+ EDA+ +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +   EKG  PD  S++ +I+  CK+ R+D A   L  M + GC P+ +++NT++   C+ 
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR---ALGMISEMLSKGIEPDE 404
           G   +A+  F+++   G  P V +YN +   L  +  + R   A+ +   M+ KG  PD 
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY++LI  L + G +D+A  LL  ME+    P V +YN +I G C   +++E++E+  A
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421

Query: 465 MFEKGCKPNETTYVLLI 481
           M EKGC P+  TY  +I
Sbjct: 422 MVEKGCVPDTITYGTII 438



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 206/387 (53%), Gaps = 27/387 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+ DE+L   +  V  G  PDVV    LI  F +  K ++A R+++ ++ +   PDV 
Sbjct: 57  KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS--RGMIESAFKVFD 165
            YN+L++G CK  +++ A  ++     +GFSP+V+TY+ +I  LC   RG+ E A K+F 
Sbjct: 117 TYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSE-ALKLFG 172

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            +L+   +P V TY ILI   + E + ++A +L   +                 G+CK G
Sbjct: 173 SVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V  A   ++ ++ +GC PDV+S+N ++  L    + +E E L++ M ++G  PN ++++
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK---DGRLDLAIEFLDYM 325
            LI   CR GK + A+   +   ++G+ P   +Y+ L+   CK   +GR+  AI   D M
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           I  G +PD+V Y+ ++    K G  D A  +   +   GC PNV +YN++ S L      
Sbjct: 353 IEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKV 412

Query: 386 IRALGMISEMLSKGIEPDEITYNSLIS 412
             AL +   M+ KG  PD ITY ++IS
Sbjct: 413 DEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 191/360 (53%), Gaps = 23/360 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +A K DE+   ++ MV+    PDVV    L+    +  + ++A   M I++
Sbjct: 83  YNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEAR--MLIVD 140

Query: 100 KYGEPDVFAYNALISGFCKA-NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K   P+V  Y+ LISG C+    +  A K+   +  +G+ P+V TYNI+I  L     + 
Sbjct: 141 KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVN 200

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++F  L++   +P  ITYT+ I      G+ + A+ +L +M                
Sbjct: 201 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 260

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  V +A   +  +E++GC P+ IS+N L+      GKW++      EM+ RG++
Sbjct: 261 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320

Query: 262 PNVVTYSILISSLCR---DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           P VVTY+IL+  LC+   +G+ ++A+ +  A  EKG  PD  +Y  LI    K G+LD A
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L  M + GC+P++  YN++++  C     D+ALE+F  + + GC P+  +Y T+ SA
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%)

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G  P+ ITYN+L+S LC  G + +A  L   M    + P V++YN ++ GFCK   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           ++E++++     ++G  P+  TY  LI G        EA  +   +VS + +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLV 112


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 245/460 (53%), Gaps = 18/460 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     +  +++  L   + M + G    +   + +I  F + RK + A   M  + 
Sbjct: 91  FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EPD   +N L++G C   ++  A +++DR+   G  P ++T N ++  LC  G + 
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++    +P  +TY  ++      GQT  AM+LL +M                
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G +  AF     +E +G + D+I+YN L+    N G+W++G KL+ +MI R + 
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNVVT+S+LI S  ++GK  +A  +L+   ++G+ P+  +Y+ LI  +CK+ RL+ AI+ 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +D MIS GC PDI+ +N ++  +CK    D  LE+F ++S  G   N  +YNT+      
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG    A  +  EM+S+ + PD ++Y  L+  LC +G +++A+ +   +E ++    +  
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           Y III G C   +++++ ++  ++  KG K +   Y ++I
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 206/417 (49%), Gaps = 19/417 (4%)

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K++ AV +  ++++    P V  +N L S   K  Q EL   +  ++ S+G +  + T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           IMI   C    +  AF    ++++   +P  + +  L+                   G+C
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN------------------GLC 169

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +  V +A + V  +   G +P +I+ N L+  L   GK  +   L+  M+  G +PN V
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  +++ +C+ G+T  A+++LR  +E+ +  DA  Y  +I   CKDG LD A    + M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G   DI+ YNT++  FC  G  D   ++   +      PNV +++ +  +    G  
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM+ +GI P+ ITYNSLI   C++  ++EA+ ++  M S    P ++++NI+
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I G+CK  RI++ +E+   M  +G   N  TY  L++G    G    A +L   +VS
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 224/451 (49%), Gaps = 18/451 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++     M+ +   P V+   +L     + ++    + + + +E  G    ++  +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  ++  A   + ++   G+ PD V +N ++  LC    +  A ++ D+++  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQA 213
             KPT+IT   L+    L G+   A+ L+D M                  MCK G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + +R +E R  + D + Y++++  L   G  +    L  EM  +G + +++TY+ LI  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C  G+ +D   +LR   ++ ++P+  ++  LI ++ K+G+L  A + L  M+  G  P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            + YN+++  FCK    ++A+++ + +   GC P++ ++N + +    +      L +  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM  +G+  + +TYN+L+   C+ G ++ A  L  +M S R RP ++SY I++ G C   
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            + +++E+   + +   + +   Y+++I G+
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 99/196 (50%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           SY   +S+     + D A++    MI    LP ++++N + +A  K    +  L + +++
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G   ++ + + M +          A   + +++  G EPD + +N+L++ LC +  V
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA+ L+  M     +PT+I+ N ++ G C   ++++++ ++  M E G +PNE TY  +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234

Query: 481 IEGIGYGGWRAEAMEL 496
           +  +   G  A AMEL
Sbjct: 235 LNVMCKSGQTALAMEL 250



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 57/116 (49%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  +M+     P  I +N L S + +    +  + L   MES     ++ + +I+I 
Sbjct: 72  AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+ R+++ +   +  + + G +P+   +  L+ G+      +EA+EL + +V M
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 246/476 (51%), Gaps = 26/476 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI     +G  + +++  + M  NGCKP+VV    +I    ++R  N A+  + E++ + 
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD   YN+++ G C   Q+  A ++  R+   G  PDVVTYNI+I SL    ++  A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               +++     P V+TYT ++      GQ ++A++L  +M                  +
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  +V  A +F+  +  RG  P+ ++Y+ +L    N+G+ +E  +L  EM+ R + PN 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +T+SIL+  LC++G   +A  V     EKG+ P+ Y+Y+ L++ YC   +++ A +  + 
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  GC PD+ +YN ++  +C +   D+A  +  ++S     PN  +YNT+   L   G 
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            + A  +  +M S G+ P  +TY+ L++ LC+ G +DEA+ L   M+  +  P +I Y I
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 445 IILGFCKTRRINESIEVLAAMFEK----GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I G      I   +EV   +F K    G +P   TY ++I+G+   G   EA EL
Sbjct: 624 LIEGM----FIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 247/482 (51%), Gaps = 18/482 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K +    +  ++   +Y    M   G    V     LI    +    + AV V   +
Sbjct: 95  EFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM 154

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G +PDV  +  LI+G C   +I++A ++ + +   G  PDV++YN +I  LC+ G  
Sbjct: 155 FKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNT 214

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  VF ++ ++ CKP V+TY  +I +   +   + AM  L EM               
Sbjct: 215 NMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI 274

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G + +A +  + +E  GC+PDV++YN+++ +L       +    ++EM+ +G+
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ ++  LC  G+  +A+ + +  ++KG  PD  +Y+ +I + CKD  ++ A+E
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME 394

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           FL  M+  G  P+ V Y+TIL  FC  G  D+A ++F+++      PN  +++ +   L 
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    A  +   M  KG+EP+  TYN+L++  C    ++EA  +   M      P + 
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLH 514

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SYNI+I G+C +RR++++  +L  M  K   PN  TY  +++G+ Y G   +A EL   +
Sbjct: 515 SYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574

Query: 501 VS 502
            S
Sbjct: 575 CS 576



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 228/462 (49%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK   ++     MV +G +PDV+    LI        +N AV V + +E
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKME 225

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+V  YN +I   CK   +  A   L  +  RG  PD +TYN ++  LC  G + 
Sbjct: 226 QNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLN 285

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F ++ ++ CKP V+TY I+I +                  + K  +V  A  F+ 
Sbjct: 286 EATRLFKRMEQNGCKPDVVTYNIIIDS------------------LYKDRLVNDAADFLS 327

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G  PDV++Y  +L  L  +G+  E  +L  +M  +G +P+VV Y+ +I SLC+D 
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA++ L    ++G+ P+A +Y  ++  +C  G+LD A +    M+    +P+ + ++
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   C+ G   +A  +FE +++ G  PN+ +YN + +          A  +   M+ K
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD  +YN LI+  C    +D+A  LL  M   +  P  ++YN I+ G C   R+ ++
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+   M   G  P   TY +L+ G+   G   EA++L  ++
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSM 609



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 203/397 (51%), Gaps = 17/397 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +   +    K  Q      + +++   G +  V + NI+I  LC    ++ A  V
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           + ++ +   +P VIT+T LI     EG+   A++L +EM                 G+C 
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A    + +E  GC+P+V++YN ++ +L       +    ++EM+ RG+ P+ +T
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ ++  LC  G+  +A  + +  ++ G  PD  +Y+ +I +  KD  ++ A +FL  M+
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  PD+V Y TIL   C  G  ++A+ +F+K+   GC P+V +YNT+  +L       
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+  +SEM+ +GI P+ +TY++++   C  G +DEA  L  +M      P  ++++I++
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G C+   ++E+  V   M EKG +PN  TY  L+ G
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 188/363 (51%), Gaps = 17/363 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------ 204
           ++ A   F ++ R N +P+++ +   + +     Q    + L ++M +            
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V  A      +   G QPDVI++  L+  + N GK +   +L  EM+  G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            EP+V++Y+ LI+ LC  G T  AV V +  ++ G  P+  +Y+ +I + CKD  ++ A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +FL  M+  G  PD + YN+I+   C  G  ++A  +F+++   GC P+V +YN +  +L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +       A   +SEM+ +GI PD +TY +++  LC  G ++EA+ L   ME    +P V
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++YN II   CK R +N+++E L+ M ++G  PN  TY  ++ G    G   EA +L   
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 500 LVS 502
           +V 
Sbjct: 434 MVG 436



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 166/327 (50%), Gaps = 18/327 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G+ +E++   + M   GCKPDVV    +I    ++R  N A+  + E++++   P+   Y
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + ++ GFC   Q++ A ++   +  R   P+ +T++I++  LC  GM+  A  VF+ +  
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              +P + TY  L+    L  + ++A K+ + M                 G C    + +
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +  +   P+ ++YN +++ L  +G+  + ++L  +M S G+ P ++TYSIL++
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G  ++A+ + ++ KEK L PD   Y  LI      G+L++A      + +DG  P
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEK 359
               YN ++    K G +D+A E+F K
Sbjct: 652 PGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 141/267 (52%), Gaps = 28/267 (10%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PNT  L+F +       L+    + G   E+ +  E+M   G +P++     L+  +   
Sbjct: 441 PNT--LTFSI-------LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLR 491

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            K N+A +V EI+   G  PD+ +YN LI+G+C + +++ A  +L ++  +  +P+ VTY
Sbjct: 492 CKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTY 551

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N ++  LC  G +  A ++F ++      PT++TY+IL+                   G+
Sbjct: 552 NTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN------------------GL 593

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G + +A +  +S++ +  +PD+I Y +L+  +   GK E  + L +++ + G++P  
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPG 653

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAK 291
            TY+++I  L ++G +++A ++ R  K
Sbjct: 654 RTYNVMIKGLLKEGLSDEAYELFRKWK 680



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 36/195 (18%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV------------------- 92
           K +E+    E MV  GC PD+     LI  +   R+ +KA                    
Sbjct: 493 KMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYN 552

Query: 93  ----------RVMEILEKYGE-------PDVFAYNALISGFCKANQIELANKVLDRLRSR 135
                     R+++  E + +       P +  Y+ L++G CK   ++ A K+   ++ +
Sbjct: 553 TIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              PD++ Y I+I  +   G +E A  +F +L  D  +P   TY ++I+  + EG +D+A
Sbjct: 613 KLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672

Query: 196 MKLLDEMGMCKKGMV 210
            +L  +  M K  ++
Sbjct: 673 YELFRKWKMMKHNVI 687



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + D AL  F +++ +   P++  +     ++         + + ++M   G+     + N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+CLCR   VD AV +   M     +P VI++  +I G C   +I  ++E+   M   
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 469 GCKPNETTYVLLIEGIGYGG 488
           G +P+  +Y  LI G+   G
Sbjct: 193 GHEPDVISYNTLINGLCNSG 212


>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Brachypodium distachyon]
          Length = 753

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 249/473 (52%), Gaps = 19/473 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++  ++R    GK  ++   I+ MV +G  PD   C +LI+   +  K+NKA +V+E++ 
Sbjct: 294 YLGNLRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMV 353

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD    N LI+  C+  Q+  A  VL+ +R  G SP+ +T+N +I  +C++ M +
Sbjct: 354 LSGGIPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYD 413

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A   + + LR    P V+T T+L+     +  + +AM++LDE+                
Sbjct: 414 KAITFWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDEL---------------- 457

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           SLE  GCQPDV++YN L+       + ++ + ++T +I+ GLEPN  TY IL+ SLC   
Sbjct: 458 SLE--GCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKR 515

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +  D+L   K     PD  +Y+  I+ +CK G LD AI+ L+ M+SD C PDIV YN
Sbjct: 516 RWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYN 575

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+L A  K G  ++AL I   +   G    + +YNT+  AL + G+  +A+ +  EM S 
Sbjct: 576 TLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASG 635

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I PD+ITY SL+   C+  M +EA+ LL    +  F+    ++ ++I   C+  ++  +
Sbjct: 636 RISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAA 695

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            E+L  M  +    N + Y+ ++  +   G   EA  L   L+    + +D+ 
Sbjct: 696 AEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAERLHQELIDCKILKKDSL 748


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 223/450 (49%), Gaps = 18/450 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PD      LI    +  K N A  + + L   G  P   AY +LI G C AN  + A ++
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +  RG  P  VTYN+MI + C RGM+E A  +  +++ D   P V+TY  ++     
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             + ++A+ L +EM                 G+C++  + QA Q    +E++   PD  S
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y +L+  L   GK  E  KL   M+  G+ P+ VTY+++I  +C     ++A+++ ++ +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG  P  ++++ LI A+CK G+LD A   L  M  DG +PD+V Y+T+++  C     D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  + E +    C P V + NT+   L  +G    A  ++  M+S G  PD +TYN+L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR G  + A  LL DM +    P V++Y  ++ G CK  R+ E+  V A M   GC 
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY  LI G    G     ++L   +V
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMV 457



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 198/404 (49%), Gaps = 18/404 (4%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PD ++Y  LI G  KA ++  A  +  +L   G +P  V Y  +I  LC     +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F  + R  C P+ +TY ++I A+                  CK+GM+ +A   ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDAS------------------CKRGMLEEACDLIK 104

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G  PDV++YN ++  L    + EE   L  EM   G  PN  +++ +I  LC+  
Sbjct: 105 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 164

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K + A  V    + K + PD++SY  LI    K G+L+ A +    M+  G  P  V YN
Sbjct: 165 KIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   C     D+ALE+F+ +   GC P+  ++N +  A    G    A  ++  M   
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD 284

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY++LIS LC    VD+A  LL DM   + +PTV++ N +I G CK  RI E+
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            EVL AM   G  P+  TY  L+ G    G    A EL + +V+
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 19/421 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I  S + G  +E+   I+ M+ +G  PDVV    ++    +  +  +A+ +   +E+ G
Sbjct: 86  MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+  ++N +I G C+ ++I+ A +V   + ++   PD  +Y I+I  L   G +  A+
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           K+F ++L     P+ +TY ++I                   GMC    + +A +  +S+ 
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIH------------------GMCLAYTLDEALELFKSMR 247

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S+GC+P   ++N+L+      GK +E  +L+  M   G  P+VVTYS LIS LC   + +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA  +L    ++   P   + + LI   CK GR+  A E LD M+S G  PD+V YNT++
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C+ G  ++A E+   +   G  PNV +Y  + S L  +     A G+ ++M S G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+  TY +LI   C  G VD  + L  +M      P  + Y  +    CK+ R   ++E+
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 462 L 462
           L
Sbjct: 488 L 488



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 211/444 (47%), Gaps = 30/444 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           ++ + +E+L     M   GC P+      +I    Q+ K ++A +V   +E K   PD +
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  LI G  KA ++  A K+  R+   G +P  VTYN++I  +C    ++ A ++F  +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C+P+  T+ ILI A    G+ D+A +LL  M                 G+C    V
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +  +  R C+P V++ N L+  L   G+ +E  +++  M+S G  P+VVTY+ L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   CR G+TE A ++L     +GL P+  +Y  L+S  CK  RL  A      M S GC
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++  Y  ++  FC  G  D  L++F ++   G  P+   Y T+ + L  SG   RAL 
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL- 485

Query: 391 MISEMLSKGIEP-------DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              E+L +G E        DE+ Y   +  L   G ++ A+G + DM      P      
Sbjct: 486 ---EILREGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA 541

Query: 444 IIILGFCKTRRINESIEVLAAMFE 467
            ++ G CK+ +  E+  VL  + +
Sbjct: 542 SLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 146/277 (52%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  R   PD  SY +L+  L   GK  +   L  +++  G+ P+ V Y+ LI  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA ++      +G  P   +Y+ +I A CK G L+ A + +  MI DG +PD+V YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK+   ++AL +F ++  +GC PN  S+NT+   L       +A  +  EM +K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I PD  +Y  LI  L + G ++EA  L   M  +   P+ ++YN++I G C    ++E++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           E+  +M  KGC+P+  T+ +LI+     G   EA  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRL 277



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 38/375 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + GK DE+   ++ M  +G  PDVV  + LI       + + A  ++E ++
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++  +P V   N LI G CKA +I+ A +VLD + S G SPDVVTYN ++   C  G  E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++     P V+TYT L+                   G+CK   + +A     
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVS------------------GLCKANRLPEACGVFA 419

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++S GC P++ +Y  L+    + G+ + G KL  EM+  G+ P+ V Y  L + LC+ G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 279 KTEDAVDVLRAAKEKGLTPDAYS---YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++  A+++LR  +E  L  +A+    Y   +    + G++++A+ F+  M+  G LP   
Sbjct: 480 RSARALEILREGRES-LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPE 538

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
              +++A  CK+G   +A  + E++ D+                +    + +A   + EM
Sbjct: 539 RCASLVAGLCKSGQGGEARAVLEEIMDLA---------------YGGKARGKAAKFVEEM 583

Query: 396 LSKGIEPDEITYNSL 410
           + KG E ++     L
Sbjct: 584 VGKGYEIEDAVLGPL 598



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 11/287 (3%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  R + P+  +Y ILI  L + GK  DA ++ +     G+TP   +Y  LI   C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D A E    M   GC P  V YN ++ A CK G  ++A ++ +K+ + G  P+V +YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  S     AL + +EM   G  P+  ++N++I  LC+   +D+A  +  +ME+  
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P   SY I+I G  K  ++NE+ ++   M + G  P+  TY ++I G+       EA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 495 ELANALVSMHA-ISRDTFK----------RLNRTFPLLDVYKEISHL 530
           EL  ++ S     SR TF           +L+  F LL    +  H+
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 261/505 (51%), Gaps = 26/505 (5%)

Query: 8   INPKSNERVRV-SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           ++ K NE + +  S  ++RP   L+ F        KL     R  ++D  L F + M  N
Sbjct: 46  VDIKVNEAIDLFESMIQSRPLPSLIDFS-------KLFSAVARRKEYDLVLGFCKEMDLN 98

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G + ++     +I  F ++RK   A  V+    K+G EP+   ++ LI+GFC   ++  A
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             ++DR+    + P+VVT N +I  LC +G +  A  + D++++  C+   ITY  ++  
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
               G T  A+ L  +M                  +CK G +  A      +E +G + D
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKAD 278

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y+ ++  L N G+W++G K++ EMI R + PNVVT+S LI    ++GK  +A ++  
Sbjct: 279 VVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYN 338

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G+ PD  +Y  LI  +CK+ RL  A + LD M+S GC P+IV Y+ ++ ++CK  
Sbjct: 339 EMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAK 398

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D  + +F ++S  G   +  +YNT+      SG    A  +  EM+S+G+ P  +TY 
Sbjct: 399 RVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYG 458

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            L+  LC +G + +A+ +   M+ +R    +  YNIII G C   +++++  +  ++  K
Sbjct: 459 ILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVK 518

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEA 493
           G KP+  TY ++I G+   G  +EA
Sbjct: 519 GVKPDVLTYNVMIGGLCKKGSLSEA 543



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 228/469 (48%), Gaps = 18/469 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
             F+     F  LI      G+  E++  ++ MV    +P+VV    LI     + +  +
Sbjct: 133 FGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTE 192

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ +++ + KYG E +   Y  +++  CK+    LA  +  ++  R     VV Y+I+I 
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           SLC  G ++ A  +F+++     K  V+ Y+ +I     +G+ D   K+L EM       
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K+G + +A +    + +RG  PD I+Y+ L+       +  E  +++
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M+S+G EPN+VTYSILI+S C+  + ++ + +      KGL  D  +Y+ L+  +C+ 
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+L++A E    M+S G  P +V Y  +L   C NG   +ALEIFEK+        +  Y
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIY 492

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N +   + ++     A  +   +  KG++PD +TYN +I  LC+ G + EA  L   M+ 
Sbjct: 493 NIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               P+  +YNI+I        +  S+E++  M  +G   + +T  +++
Sbjct: 553 DGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 222/446 (49%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K +E++   ESM+ +   P ++  +KL     + ++ +  +   + ++  G E +++  N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  ++  A  V+ R    GF P+ +T++ +I   C  G +  A  + D+++  
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P V+T   LI                   G+C KG V +A   +  +   GC+ + I
Sbjct: 169 KYRPNVVTVNTLIN------------------GLCLKGRVTEALVLIDRMVKYGCEANEI 210

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  +L  +   G       L  +M  R ++ +VV YSI+I SLC+DG  +DA+ +    
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           + KG+  D  +Y  +I   C DGR D   + L  MI    +P++V ++ ++  F K G  
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A E++ ++   G  P+  +Y+++            A  M+  M+SKG EP+ +TY+ L
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  C+   VD  + L  ++ S       ++YN ++ GFC++ ++N + E+   M  +G 
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
            P+  TY +L++G+   G   +A+E+
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEI 476



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 198/415 (47%), Gaps = 18/415 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+L  I+ MV  GC+ + +    ++ +  +   +  A+ +   +E+   +  V  Y
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + +I   CK   ++ A  + + +  +G   DVV Y+ +IG LC+ G  +   K+  +++ 
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG 307

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P V+T++ LI   + EG+  +A +L +EM                 G CK+  +G+
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q +  + S+GC+P++++Y++L+ +     + + G +L  E+ S+GL  + VTY+ L+ 
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ GK   A ++ +    +G+ P   +Y  L+   C +G L  A+E  + M     + 
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            I  YN I+   C     D A  +F  LS  G  P+V +YN M   L   G    A  + 
Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLF 547

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
            +M   G  P + TYN LI        V  +V L+ +M+   F     +  ++++
Sbjct: 548 RKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVV 602



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 188/386 (48%), Gaps = 20/386 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
            Q+  +I    + G  D++L     M   G K DVV  + +I     + + +   +++ E
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ +   P+V  ++ALI  F K  ++  A ++ + + +RG +PD +TY+ +I   C    
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++ D ++   C+P ++TY+ILI +     + D  M+L  E               
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE--------------- 409

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              + S+G   D ++YN L++     GK    ++L  EM+SRG+ P+VVTY IL+  LC 
Sbjct: 410 ---ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+ + A+++    ++  +      Y+ +I   C   ++D A      +   G  PD++ 
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   CK G+  +A  +F K+ + GC P+  +YN +  A       I ++ +I EM 
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMK 586

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDE 422
            +G   D  T   ++  L  DG +D+
Sbjct: 587 MRGFAADASTIKMVVVML-SDGRLDK 611



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 144/307 (46%), Gaps = 8/307 (2%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR  +   K  E   L   MI     P+++ +S L S++ R  + +  +   + 
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G+  + Y+ + +I+ +C+  +L  A   +   +  G  P+ + ++T++  FC  G 
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A+ + +++ ++   PNV + NT+ + L   G    AL +I  M+  G E +EITY  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ +C+ G    A+ L   ME    + +V+ Y+I+I   CK   +++++ +   M  KG
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 470 CKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVY-KEI 527
            K +   Y  +I G+   G W   A  L         I R+    +     L+DV+ KE 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLR------EMIGRNIIPNVVTFSALIDVFVKEG 328

Query: 528 SHLATKD 534
             L  K+
Sbjct: 329 KLLEAKE 335


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 234/448 (52%), Gaps = 22/448 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   ++ M  +GC P+ ++   LI    +  + N+ ++++E +   G  PDV  +N  
Sbjct: 234 DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 293

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK  +I  A K++DR+  RGF+P+  TY +++  LC  G ++ A      LL    
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVP 349

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P V+ +  LI   +  G+ D+A  ++ E                 S+ S GC PD+ +Y
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHE-----------------SMLSVGCGPDIFTY 392

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+  L   G      +LM EM  +G EPNV+TY+ILI   C++G+ E+A +VL     
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL  +A  Y+ LISA CKD ++  A+     M S GC PDI  +N+++   CK    ++
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 512

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL +++ +   G   N  +YNT+  A    G    AL ++++ML +G   D+ITYN LI 
Sbjct: 513 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 572

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LCR G +++ + L  DM S    P  IS NI+I G C+T  I  ++E L  M  +G  P
Sbjct: 573 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 632

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  TY  LI G+   G   EA+ L + L
Sbjct: 633 DIVTYNSLINGLCKTGRAQEALNLFDKL 660



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 21/418 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           +  E+   ++ M+  G  P+      L+    +  K ++A     +L K   P+V  +N 
Sbjct: 302 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA---RMLLNKVPNPNVVLFNT 358

Query: 112 LISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           LI+G+    +++ A  V+ + + S G  PD+ TYN +I  LC +G + SA ++ +++   
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 418

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P VITYTILI     EG+ ++A  +LDEM                  +CK   V  A
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                 + S+GC+PD+ ++N L+  L  + K+EE   L  +M+  G+  N +TY+ LI +
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             R G  ++A+ ++     +G   D  +Y+ LI A C+ G ++  +   + M+S G  P+
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++ N ++   C+ GN   ALE    +   G  P++ +YN++ + L  +G    AL +  
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 658

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           ++  +GI PD ITYN+LIS  C++GM D+A  LL     + F P  +++ I++  F K
Sbjct: 659 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 187/381 (49%), Gaps = 20/381 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI      G+ DE+   + ESM++ GC PD+     LI    ++     A  +M  +
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  G EP+V  Y  LI  FCK  ++E A  VLD +  +G + + V YN +I +LC    +
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A  +F  +    CKP + T+  LI                   G+CK     +A    
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLI------------------FGLCKVNKFEEALGLY 517

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +   G   + I+YN L+   L  G  +E  KL+ +M+ RG   + +TY+ LI +LCR 
Sbjct: 518 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 577

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G  E  + +      KGL P+  S + LI+  C+ G +  A+EFL  MI  G  PDIV Y
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++   CK G A +AL +F+KL   G  P+  +YNT+ S     G    A  ++S  + 
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697

Query: 398 KGIEPDEITYNSLISCLCRDG 418
            G  P+E+T+  L+S   ++G
Sbjct: 698 SGFIPNEVTWYILVSNFIKEG 718



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 225/506 (44%), Gaps = 60/506 (11%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FDV    +  LI +   AG+F      +  M   G      +   ++K + +     +A 
Sbjct: 111 FDV----YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQAT 166

Query: 93  RVMEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           R++  L+  G    EP   +YN ++      N  ++   V   + S+G SP V T+ +++
Sbjct: 167 RLL--LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 224

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +LC    ++SA  +   + R  C P  I Y  LI A                  + K G
Sbjct: 225 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHA------------------LXKVG 266

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +  + +  +   GC PDV ++N  +  L  M +  E  KL+  M+ RG  PN  TY 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 269 ILISSLCRDGKTEDA---------------------------VDVLRAAKEK-----GLT 296
           +L+  LCR GK ++A                           +D  +A   +     G  
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD ++Y+ LI   CK G L  A E ++ M   GC P+++ Y  ++  FCK G  ++A  +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++S  G   N   YN + SAL        AL M  +M SKG +PD  T+NSLI  LC+
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
               +EA+GL  DM         I+YN +I  F +   + E+++++  M  +GC  ++ T
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           Y  LI+ +   G   + + L   ++S
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMS 592



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 18/311 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
            +  M   GC+P+V+  T LI +F +E +  +A  V++ +   G   +   YN LIS  C
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 470

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  +++ A  +   + S+G  PD+ T+N +I  LC     E A  ++  +L +      I
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY  LI A +  G   +A+KL+++M                  +C+ G + +       +
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S+G  P+ IS N+L+  L   G  +   + + +MI RGL P++VTY+ LI+ LC+ G+ 
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A+++    + +G+ PDA +Y+ LIS +CK+G  D A   L   +  G +P+ V +  +
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710

Query: 341 LAAFCKNGNAD 351
           ++ F K G+ +
Sbjct: 711 VSNFIKEGDQE 721



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 1/265 (0%)

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DY 324
            Y +LI  L   G+ +    +L   K++G+      +  ++  Y + G    A   L D 
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
                C P   +YN +L              +F ++   G  P V ++  +  AL    +
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ +M   G  P+ I Y +LI  L + G V+E + LL +M      P V ++N 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            I G CK  RI+E+ +++  M  +G  PN  TY +L+ G+   G   EA  L N + + +
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 352

Query: 505 AISRDTFKRLNRTFPLLDVYKEISH 529
            +  +T      +   LD  K + H
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMH 377


>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
 gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
          Length = 585

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 233/459 (50%), Gaps = 19/459 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG 102
           ++R    GK  ++   I+ MV +G  PD   C +LI+   +  K+NKA  V+E++    G
Sbjct: 130 LRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGG 189

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD    N LI+  C   Q+  A KVL+ +R  G SP  +T+N +I  +CS  M + A  
Sbjct: 190 VPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAIS 249

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            + + L+    P  +T T+L+     +    +A+++LDE+G+                  
Sbjct: 250 FWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGL------------------ 291

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GCQPDV+SYN L+      G  +  + ++T + + GLEPN  TY IL+ SLC   +  +
Sbjct: 292 EGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSE 351

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             D+L   K+    PD  +Y+  I+ +C+ G LD AI+ L+ M+++ C PDIV YNT+L 
Sbjct: 352 VGDLLAHMKQANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLN 411

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G  ++AL IF  + + GC     +YNT+  AL   G+ I A+ +  EM   GI P
Sbjct: 412 AISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISP 471

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D++TY SL+   C+  M  EA+ LL  M +  F     +++++I   CK      + E+L
Sbjct: 472 DDVTYGSLVMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEIL 531

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             M  +        Y+ ++  +   G   EA  L   LV
Sbjct: 532 RVMVSRNVNHRSAFYLSIVTRVAKSGRVKEAQILHQELV 570



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 133/267 (49%)

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           LR   N GK  +  +++ EM+  G  P+      LI  L R GKT  A  VL      G 
Sbjct: 130 LRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGG 189

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  + + LI+  C +G+L  A++ L+ M   GC P  + +NT++   C +   D+A+ 
Sbjct: 190 VPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAIS 249

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
            +++   +G PP   +   +   +      +RAL ++ E+  +G +PD ++YN+LIS  C
Sbjct: 250 FWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSC 309

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G +  A  +L  + +    P   +Y I++   C  RR +E  ++LA M +   KP+ T
Sbjct: 310 KAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVT 369

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
            Y + I      G+  +A+++   +V+
Sbjct: 370 AYNIFINYFCRYGYLDQAIDVLEVMVN 396



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 85/183 (46%)

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           A  Y   +  +C +G+L  A   +D M+  G +PD      ++    + G  ++A  + E
Sbjct: 123 AECYADSLRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLE 182

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
            +   G  P+  + N + + L   G    A+ ++ +M   G  P  IT+N+LI C+C   
Sbjct: 183 VMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHH 242

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           M D A+    +     + P  ++  +++   CK      ++EVL  +  +GC+P+  +Y 
Sbjct: 243 MYDRAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYN 302

Query: 479 LLI 481
            LI
Sbjct: 303 TLI 305



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 73/164 (44%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y   L   C NG   QA  + +++   G  P+      +   L  +G   +A  ++  M+
Sbjct: 126 YADSLRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMV 185

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  PD IT N LI+ LC +G +  A+ +L DM  T   P+ I++N +I   C     +
Sbjct: 186 LSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYD 245

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +I       + G  P E T  LL++ I        A+E+ + L
Sbjct: 246 RAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDEL 289



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 3/172 (1%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  +E+L    S+  NGC+   +    LI    ++ +   A+ + + +   G  PD  
Sbjct: 415 KRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDV 474

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y +L+ GFCK N  + A ++L+++ + GF     T+++MI SLC     E+A ++   +
Sbjct: 475 TYGSLVMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVM 534

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           +  N       Y  ++      G+  +A  L  E+   K  ++ +A QF+ S
Sbjct: 535 VSRNVNHRSAFYLSIVTRVAKSGRVKEAQILHQELVQSK--VLKEASQFILS 584


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 228/428 (53%), Gaps = 14/428 (3%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++N+A+ ++  + ++G  PD   Y  +I   C    +  A  +L+ +   G + DV T++
Sbjct: 190 RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFD 249

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            ++  +C  G +  A ++ D+++   C P V+TY  L+Q      Q D+A  +L  +   
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 309

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G   +G + +A +   ++  +GCQPD  +Y++L+  L  +G+     +L+
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  +G  PNVVTY+I++ S C++G  +D   +L     KGLT ++  Y+ +I A CKD
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR+D A+  +  M S GC PDI +YNTI+   C N   ++A  +FE L + G   N  +Y
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT+  AL   G    A+ +  EM+  G   D ++YN LI  +C+DG VD ++ LL +M  
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
              +P  +SYNI+I   CK RR+ +++E+   M  +G  P+  TY  LI G+   GW   
Sbjct: 550 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHA 609

Query: 493 AMELANAL 500
           A+ L   L
Sbjct: 610 ALNLLEKL 617



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 234/467 (50%), Gaps = 57/467 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ +E+L  +  M  +GC PD V+   +I     +    +A  ++ E+L      DV 
Sbjct: 187 RLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            ++ ++ G C   ++  A +++DR+ ++G  P V+TY  ++  LC     + A  +  ++
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMV 210
              N    V+ +  +I   + EG+  +A +L + MG+                 CK G +
Sbjct: 307 PELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +R +E +G  P+V++Y ++L +    G W++   L+ EM ++GL  N   Y+ +
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC-------------------- 310
           I +LC+DG+ ++A+ +++  + +G  PD  SY+ +I   C                    
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 311 ---------------KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                          +DGR   A+     MI  GC  D+V+YN ++ A CK+GN D++L 
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + E++++ G  PN  SYN + S L        AL +  +ML++G+ PD +TYN+LI+ LC
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + G +  A+ LL  + +    P +I+YNI+I   CK R ++++  +L
Sbjct: 603 KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 23/362 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I      GK  E+    E+M   GC+PD    + L+    +  + + AVR++  +E
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREME 373

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+V  Y  ++  FCK    +    +L+ + ++G + +   YN MI +LC  G ++
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++    C P + +Y  +I                    +C    + +A     
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYH------------------LCNNEQMEEAEHMFE 475

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +L   G   + I+YN ++  LL  G+W++  +L  EMI  G   +VV+Y+ LI ++C+DG
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + ++ +L    EKG+ P+  SY+ LIS  CK+ R+  A+E    M++ G  PDIV YN
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK G    AL + EKL +    P++ +YN + S  W    K+R L   + +L++
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS--WHC--KVRLLDDAAMLLNR 651

Query: 399 GI 400
            +
Sbjct: 652 AM 653



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 203/429 (47%), Gaps = 36/429 (8%)

Query: 90  KAVRVMEIL-EKYG-EPDVFAYNALISGF----CKANQIELANKVLDRLRSRGFSPDVVT 143
           +A+ +++ L  ++G +P   +YN ++S      C A+ + L  +++ R R     P   T
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDR---VPPTTFT 177

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           + +   +LC  G    A  +   + R  C P  + Y  +I A   +G   +A  LL+EM 
Sbjct: 178 FGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML 237

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +                   GC  DV +++ ++R +  +G+  E  +L+  M+++G  P 
Sbjct: 238 L------------------MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 279

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+TY  L+  LCR  + ++A  +L    E     +   ++ +I     +G+L  A E  +
Sbjct: 280 VMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   GC PD   Y+ ++   CK G    A+ +  ++   G  PNV +Y  +  +   +G
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395

Query: 384 --DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             D  RAL  + EM +KG+  +   YN +I  LC+DG +DEA+GL+ +M S    P + S
Sbjct: 396 MWDDTRAL--LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN II   C   ++ E+  +   + E+G   N  TY  +I  +   G   +A+ LA  ++
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 502 SMHAISRDT 510
            +H  S D 
Sbjct: 514 -LHGCSLDV 521



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 152/359 (42%), Gaps = 46/359 (12%)

Query: 190 GQTDKAMKLLDEM-------------GMCKKGMVGQAFQFVRSLESR-GCQPDVISYNML 235
           G  D+A+ LLD +              + +    G+A   +  L  R G QP   SYN++
Sbjct: 86  GDPDRALSLLDSLPPGFLPLRESLLLPLLRSLPPGRALHLLDQLPRRFGVQPSFRSYNVV 145

Query: 236 LRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L  L       +   L   M+ R  + P   T+ +   +LCR G+  +A+ +LR     G
Sbjct: 146 LSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHG 205

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             PDA  Y  +I A C  G +  A   L+ M+  GC  D+  ++ ++   C  G   +A 
Sbjct: 206 CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAA 265

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALW--SSGDKIRA-LGMISE----------------- 394
            + +++   GC P V +Y  +   L      D+ RA LG + E                 
Sbjct: 266 RLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEG 325

Query: 395 -----------MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
                      M  KG +PD  TY+ L+  LC+ G +  AV LL +ME   F P V++Y 
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYT 385

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I++  FCK    +++  +L  M  KG   N   Y  +I  +   G   EAM L   + S
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H  S DV    +  LIK   + G  D SL  +E M   G KP+ V    LI +  +ER+ 
Sbjct: 515 HGCSLDV--VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 572

Query: 89  NKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             A+ +  ++L +   PD+  YN LI+G CK   +  A  +L++L +    PD++TYNI+
Sbjct: 573 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNC 172
           I   C   +++ A  + ++ +   C
Sbjct: 633 ISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 234/448 (52%), Gaps = 22/448 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   ++ M  +GC P+ ++   LI    +  + N+ ++++E +   G  PDV  +N  
Sbjct: 252 DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 311

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK  +I  A K++DR+  RGF+P+  TY +++  LC  G ++ A      LL    
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVP 367

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P V+ +  LI   +  G+ D+A  ++ E                 S+ S GC PD+ +Y
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHE-----------------SMLSVGCGPDIFTY 410

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+  L   G      +LM EM  +G EPNV+TY+ILI   C++G+ E+A +VL     
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL  +A  Y+ LISA CKD ++  A+     M S GC PDI  +N+++   CK    ++
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 530

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL +++ +   G   N  +YNT+  A    G    AL ++++ML +G   D+ITYN LI 
Sbjct: 531 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 590

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LCR G +++ + L  DM S    P  IS NI+I G C+T  I  ++E L  M  +G  P
Sbjct: 591 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 650

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  TY  LI G+   G   EA+ L + L
Sbjct: 651 DIVTYNSLINGLCKTGRAQEALNLFDKL 678



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 21/418 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           +  E+   ++ M+  G  P+      L+    +  K ++A     +L K   P+V  +N 
Sbjct: 320 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA---RMLLNKVPNPNVVLFNT 376

Query: 112 LISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           LI+G+    +++ A  V+ + + S G  PD+ TYN +I  LC +G + SA ++ +++   
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P VITYTILI     EG+ ++A  +LDEM                  +CK   V  A
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                 + S+GC+PD+ ++N L+  L  + K+EE   L  +M+  G+  N +TY+ LI +
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             R G  ++A+ ++     +G   D  +Y+ LI A C+ G ++  +   + M+S G  P+
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++ N ++   C+ GN   ALE    +   G  P++ +YN++ + L  +G    AL +  
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 676

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           ++  +GI PD ITYN+LIS  C++GM D+A  LL     + F P  +++ I++  F K
Sbjct: 677 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 187/381 (49%), Gaps = 20/381 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI      G+ DE+   + ESM++ GC PD+     LI    ++     A  +M  +
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  G EP+V  Y  LI  FCK  ++E A  VLD +  +G + + V YN +I +LC    +
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A  +F  +    CKP + T+  LI                   G+CK     +A    
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLI------------------FGLCKVNKFEEALGLY 535

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +   G   + I+YN L+   L  G  +E  KL+ +M+ RG   + +TY+ LI +LCR 
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 595

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G  E  + +      KGL P+  S + LI+  C+ G +  A+EFL  MI  G  PDIV Y
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++   CK G A +AL +F+KL   G  P+  +YNT+ S     G    A  ++S  + 
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715

Query: 398 KGIEPDEITYNSLISCLCRDG 418
            G  P+E+T+  L+S   ++G
Sbjct: 716 SGFIPNEVTWYILVSNFIKEG 736



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 234/498 (46%), Gaps = 46/498 (9%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVA-NGCKP---------DVVM---CTKLIKKF 82
           +E+ F+ ++K   RAG   ++   +  M     C+P         DV++   C K++   
Sbjct: 163 RESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNV 222

Query: 83  FQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           F E           +L K   P V+ +  ++   C  N+++ A  +L  +   G  P+ +
Sbjct: 223 FYE-----------MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAI 271

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y  +I +L   G +    K+ +++L   C P V T+   I       +  +A KL+D M
Sbjct: 272 VYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM 331

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+C+ G V +A    R L ++   P+V+ +N L+   ++ G+ 
Sbjct: 332 LLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRL 387

Query: 246 EEGEKLMTE-MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           +E + +M E M+S G  P++ TY+ LI  LC+ G    A +++   + KG  P+  +Y  
Sbjct: 388 DEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTI 447

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI  +CK+GRL+ A   LD M   G   + V YN +++A CK+     AL +F  +S  G
Sbjct: 448 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C P++ ++N++   L        ALG+  +ML +G+  + ITYN+LI    R G + EA+
Sbjct: 508 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L+ DM         I+YN +I   C+   I + + +   M  KG  PN  +  +LI G+
Sbjct: 568 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 627

Query: 485 GYGGWRAEAMELANALVS 502
              G    A+E    ++ 
Sbjct: 628 CRTGNIQHALEFLRDMIH 645



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 226/506 (44%), Gaps = 60/506 (11%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FDV    +  LI +   AG+F  +   +  M   G      +   ++K + +     +A 
Sbjct: 129 FDV----YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQAT 184

Query: 93  RVMEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           R++  L+  G    EP   +YN ++      N  ++   V   + S+G SP V T+ +++
Sbjct: 185 RLL--LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 242

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +LC    ++SA  +   + R  C P  I Y  LI A                  + K G
Sbjct: 243 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHA------------------LSKVG 284

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +  + +  +   GC PDV ++N  +  L  M +  E  KL+  M+ RG  PN  TY 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 269 ILISSLCRDGKTEDA---------------------------VDVLRAAKEK-----GLT 296
           +L+  LCR GK ++A                           +D  +A   +     G  
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 404

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD ++Y+ LI   CK G L  A E ++ M   GC P+++ Y  ++  FCK G  ++A  +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++S  G   N   YN + SAL        AL M  +M SKG +PD  T+NSLI  LC+
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
               +EA+GL  DM         I+YN +I  F +   + E+++++  M  +GC  ++ T
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           Y  LI+ +   G   + + L   ++S
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMS 610



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 18/311 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
            +  M   GC+P+V+  T LI +F +E +  +A  V++ +   G   +   YN LIS  C
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 488

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  +++ A  +   + S+G  PD+ T+N +I  LC     E A  ++  +L +      I
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY  LI A +  G   +A+KL+++M                  +C+ G + +       +
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S+G  P+ IS N+L+  L   G  +   + + +MI RGL P++VTY+ LI+ LC+ G+ 
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A+++    + +G+ PDA +Y+ LIS +CK+G  D A   L   +  G +P+ V +  +
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728

Query: 341 LAAFCKNGNAD 351
           ++ F K G+ +
Sbjct: 729 VSNFIKEGDQE 739



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 5/267 (1%)

Query: 266 TYSILISSLCRDG--KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL- 322
            Y +LI  L   G  KT DA+  L   K++G+      +  ++  Y + G    A   L 
Sbjct: 131 VYYMLIDKLGAAGEFKTTDAL--LMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLL 188

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D      C P   +YN +L              +F ++   G  P V ++  +  AL   
Sbjct: 189 DMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            +   A  ++ +M   G  P+ I Y +LI  L + G V+E + LL +M      P V ++
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N  I G CK  RI+E+ +++  M  +G  PN  TY +L+ G+   G   EA  L N + +
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368

Query: 503 MHAISRDTFKRLNRTFPLLDVYKEISH 529
            + +  +T      +   LD  K + H
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMH 395


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 246/465 (52%), Gaps = 45/465 (9%)

Query: 81  KFFQERKSNKAVR----VMEILEKYGE------------------PDVFAYNALISGFCK 118
           KFF  R S+++V     V++ L + GE                  P +  YN +I+G CK
Sbjct: 34  KFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 93

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           +N++    ++ + L  RG  PDVVTYN +I SLC  G +E A ++   +    C P V+T
Sbjct: 94  SNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-------------------GMCKKGMVGQAFQFVRS 219
           Y++LI      G+ D+A +L+ EM                   G+CK+ M  +A + +RS
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 220 LE--SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           L   S    PD ++++ L+  L   G+ +E      +MI+ G  PNVVTY+ L++ LC+ 
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKA 271

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            K E A  ++ +  +KG+TPD  +Y  L+ A+CK  R+D A+E L  M S GC P++V +
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+I+   CK+  + +A +I  ++ +    P+  ++N + +    +G+  +A  +  EM++
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           K ++PD +T+ +LI  LC+ G V+ A  +L  M +    P V++YN+++ G CK+ RI E
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             E L  M   GC P   TY  L+  +       +A++L + L S
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKS 496



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 238/506 (47%), Gaps = 60/506 (11%)

Query: 49  RAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDV 106
           RAG+   +L  F   M  +G  P +V    +I    +  +    + + E L K G  PDV
Sbjct: 57  RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDV 116

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN LI   CKA  +E A ++   + SRG  P+VVTY+++I  LC  G I+ A ++  +
Sbjct: 117 VTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 176

Query: 167 LLRDNC---------------------------------------KPTVITYTILIQATM 187
           + R +C                                        P  +T++ LI    
Sbjct: 177 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 236

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             GQTD+A    D+M                 G+CK   + +A   + S+  +G  PDVI
Sbjct: 237 KCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 294

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y++L+       + +E  +L+  M SRG  PNVVT++ +I  LC+  ++ +A  +    
Sbjct: 295 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             + L PD  +++ LI+  CK G  + A    + M++    PD++ +  ++   CK G  
Sbjct: 355 YNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + A +I + + ++G PPNV +YN +   L  SG        + EM+S G  P+ +TY SL
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  LCR    D+A+ L+  ++S  + P  ++YNI++ G  K+ +  ++I VL  M  KG 
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 534

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           +P+  T+     G+   G  A  MEL
Sbjct: 535 QPDSFTFAACFGGLHRSGNLAGTMEL 560



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 215/439 (48%), Gaps = 25/439 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           LI    + G+ DE+   I+ M    C   P+++     +    ++  + +A  +M  L  
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 101 YG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 PD   ++ LI G CK  Q + A    D + + G+ P+VVTYN ++  LC    +
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A  + + ++     P VITY++L+ A                   CK   V +A + +
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDA------------------FCKASRVDEALELL 316

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + SRGC P+V+++N ++  L    +  E  ++  ++ +R L P+ VT++ILI+  C+ 
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G  E A  +      K + PD  ++  LI   CK G+++ A + LD M + G  P++V Y
Sbjct: 377 GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 436

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++   CK+G  ++  E  E++   GC P   +Y ++  AL  +     AL ++S++ S
Sbjct: 437 NVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKS 496

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G +PD +TYN L+  L + G  ++A+ +L +M     +P   ++     G  ++  +  
Sbjct: 497 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAG 556

Query: 458 SIEVLAAMFEKGCKPNETT 476
           ++E+L  +  KG  P+ TT
Sbjct: 557 TMELLRVVLAKGMLPDATT 575



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 190/373 (50%), Gaps = 21/373 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + G+ DE+    + M+A G  P+VV    L+    +  K  +A  ++E ++
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PDV  Y+ L+  FCKA++++ A ++L  + SRG +P+VVT+N +I  LC      
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF++  Q+      P  +T+ ILI                   G CK G   QA     
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIA------------------GACKAGNFEQASALFE 387

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + ++  QPDV+++  L+  L   G+ E    ++  M + G+ PNVVTY++L+  LC+ G
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG 447

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E+  + L      G  P++ +Y  L+ A C+  R D A++ +  + S G  PD V YN
Sbjct: 448 RIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYN 507

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K+G  +QA+ + E++   G  P+  ++   F  L  SG+    + ++  +L+K
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAK 567

Query: 399 GIEPDEITYNSLI 411
           G+ PD  T +S++
Sbjct: 568 GMLPDATTCSSIL 580


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 239/449 (53%), Gaps = 20/449 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F KL+    + G   ES    + ++  G  P++      I+   +E   ++AVR++  
Sbjct: 296 TTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC 355

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + + G  PDV  YN +I G C+ +++  A + L ++ + GF P+  TYN +I   C +GM
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++    +    KP   TY  L+     +G  D+AM +       K G+       
Sbjct: 416 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVF------KDGL------- 462

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 +G +P +I YN L++ L   G      +LM EM  +G +P++ TY+++I+ LC+
Sbjct: 463 -----GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G   DA  ++  A  KG  PD ++Y+ L+  YC+  +LD AIE ++ M S G  PD++ 
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT+L   CK   +++ +EIF+ +++ GC PN+ +YNT+  +L +S     A+ ++ EM 
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRI 455
           SKG+ PD +++ +LI+  C+ G +D A GL   ME       T  +YNIII  F +   +
Sbjct: 638 SKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNM 697

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             ++ + + M + GC P+  TY +LI+G 
Sbjct: 698 KMALRLFSEMKKNGCDPDNYTYRVLIDGF 726



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 244/487 (50%), Gaps = 19/487 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ++  + +T     L + D     +  ++      G F+++      M     + DV   T
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYT 229

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             IK F +  +   A+R++  +   G   +  AY  +++GF +    + A ++ D +   
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              PDV T+N ++ +LC +G +  + ++FD++L+    P + T+ I IQ           
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ----------- 338

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+CK+G + +A + +  +   G +PDV++YN ++  L    +  E E+ + +M
Sbjct: 339 -------GLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           ++ G EPN  TY+ +I   C+ G   DA  +L+ A  KG  PD ++Y  L++ +C+DG  
Sbjct: 392 VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP 451

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+      +  G  P I+ YNT++   C+ G    AL++  ++++ GC P++ +YN +
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            + L   G    A  +I + ++KG  PD  TYN+L+   CR   +D A+ L+  M S   
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P VI+YN ++ G CKT +  E +E+  AM EKGC PN  TY  +IE +       EA++
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 496 LANALVS 502
           L   + S
Sbjct: 632 LLGEMKS 638



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 231/464 (49%), Gaps = 23/464 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  D ++  +  +   G +PDVV    +I    ++ +  +A   +  +   G EP+ F
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I G+CK   +  AN++L     +GF PD  TY  ++   C  G  + A  VF   
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    +P++I Y  LI+    +G    A++L++EM                 G+CK G +
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +    ++GC PD+ +YN L+       K +   +L+  M S+G+ P+V+TY+ L
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+  K+E+ +++ +A  EKG  P+  +Y+ +I + C   +++ A++ L  M S G 
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIF---EKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            PD+V++ T++  FCK G+ D A  +F   EK  DV      ++YN + SA     +   
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVS--HTTATYNIIISAFSEQLNMKM 699

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           AL + SEM   G +PD  TY  LI   C+ G V++    L++     F P++ ++  ++ 
Sbjct: 700 ALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLN 759

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
             C   ++ E++ ++  M +K   P+    +   +  G+  + A
Sbjct: 760 CLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHITYHA 803



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 192/391 (49%), Gaps = 18/391 (4%)

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           + +  +I+ A    +R+      P V +YN ++  L   G    A KV+ ++     +  
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           V TYTI I++                   C+ G    A + +R++   GC  + ++Y  +
Sbjct: 225 VYTYTIRIKS------------------FCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 266

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +      G  +   +L  EM+   L P+V T++ L+ +LC+ G   ++  +     ++G+
Sbjct: 267 VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P+ ++++  I   CK+G LD A+  L  +  +G  PD+V YNT++   C+     +A E
Sbjct: 327 CPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE 386

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
              K+ + G  PN  +YN++       G  + A  ++ + + KG +PDE TY SL++  C
Sbjct: 387 CLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFC 446

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +DG  D+A+ +  D      RP++I YN +I G C+   I  +++++  M EKGCKP+  
Sbjct: 447 QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIW 506

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           TY L+I G+   G  ++A  L    ++   I
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAITKGCI 537



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 36/307 (11%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR------------------------ 258
           +G +  + +Y  +L+ L   GK+ E E L++EM S                         
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172

Query: 259 ------------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
                         +P+V +Y+ +++ L   G    A  V    K+K +  D Y+Y   I
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
            ++C+ GR   A+  L  M   GC  + V Y T++  F + G+ D+A E+F+++ +    
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+V+++N +  AL   G  + +  +  ++L +G+ P+  T+N  I  LC++G +D AV L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L  +     RP V++YN +I G C+  R+ E+ E L  M   G +PN+ TY  +I+G   
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 487 GGWRAEA 493
            G   +A
Sbjct: 413 KGMVVDA 419


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/457 (32%), Positives = 239/457 (52%), Gaps = 26/457 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G+  ++    E M+  G  PDVV    L+  F +  K ++A+++ +   K G  PDV  
Sbjct: 98  GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVT 157

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNALI+GFCKA++++ A ++L R+ S    PDVVTYN ++  LC  G ++ A  +   ++
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IV 214

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK-GMVGQAFQFVRSLESRGCQP 227
                P VITY+ LI                   G+C++   +  A Q +  +   GC+P
Sbjct: 215 DKGFSPNVITYSTLIS------------------GLCRELRRLESARQLLEKMVLNGCKP 256

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D++SYN L+  L       E  KL   ++ +G EP V TY+ILI  L ++ +  +A ++ 
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               + GL PDA +Y   I   CK GR++ A+  L  M   GC+PD+V++N ++   CK 
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D+A  +   +   GC PN  S+NT+      +G   +A+    EML +G++P  +TY
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 436

Query: 408 NSLISCLCR---DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           N L+  LC+   +G + EA+ L   M      P V++Y+ +I G  K  +++++  +L A
Sbjct: 437 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 496

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M  KGC PN  TY  LI G+       EA+EL  A+V
Sbjct: 497 MEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 231/426 (54%), Gaps = 22/426 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           PD      L++   +  K  KA R +E L   G  D+  +N  ISG C+A++I  A  V 
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D +R  GF P+ +TYN ++  LC+ G +  A  +++++++    P V+TY  L+      
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G+ D+A+K+ D  G  K+G V                PDV++YN L+       K +E +
Sbjct: 134 GKLDEALKIFD--GAVKRGFV----------------PDVVTYNALINGFCKADKLDEAQ 175

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +++  M+S  L P+VVTY+ L++ LC++G+ ++A  ++    +KG +P+  +Y  LIS  
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGL 232

Query: 310 CKD-GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           C++  RL+ A + L+ M+ +GC PDIV+YN ++    +     +AL++F  +   G  P 
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE 292

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V +YN +   L        A  + S ++  G+EPD ITY   I  LC+ G V++A+ +L 
Sbjct: 293 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           DM+     P V+S+N +I G CK +R++E+  +L+ M  KGC PN  ++  LI G    G
Sbjct: 353 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412

Query: 489 WRAEAM 494
              +AM
Sbjct: 413 KWKKAM 418



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 229/444 (51%), Gaps = 23/444 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +A K DE+   ++ MV+    PDVV    L+    +  + ++A   M I++
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR--MLIVD 215

Query: 100 KYGEPDVFAYNALISGFCKA-NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K   P+V  Y+ LISG C+   ++E A ++L+++   G  PD+V+YN +I  L     + 
Sbjct: 216 KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS 275

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K+F  +LR   +P V TY ILI   + E + ++A +L   +                
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G V  A   ++ ++ +GC PDV+S+N ++  L    + +E E L++ M ++G  
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK---DGRLDLA 318
           PN ++++ LI   CR GK + A+   +   ++G+ P   +Y+ L+   CK   +GR+  A
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           I   D MI  G +PD+V Y+ ++    K G  D A  +   +   GC PNV +YN++ S 
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L        AL +   M+ KG  PD ITY ++IS LC+  MVD+A+ L          PT
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575

Query: 439 VISYNIIILGFCKTRRINESIEVL 462
              Y  +I G C   R++E++++L
Sbjct: 576 SGMYFSLIDGLCAVARVDEALKLL 599



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 196/371 (52%), Gaps = 26/371 (7%)

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQ 184
           + V D+L  R +SPD  T  I++ SL   G IE A +  +QLL +  C   + T+ I I 
Sbjct: 2   HTVYDKL-VRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD--ISTFNIYIS 58

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G+C+   +G A      +   G  P+ I+YN LL  L N G+
Sbjct: 59  ------------------GLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGR 100

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
             + + L   MI  G  P+VVTY+ L+   C+ GK ++A+ +   A ++G  PD  +Y+ 
Sbjct: 101 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNA 160

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI+ +CK  +LD A   L  M+S+  +PD+V YN+++   CKNG  D+A  +   + D G
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKG 217

Query: 365 CPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
             PNV +Y+T+ S L     ++  A  ++ +M+  G +PD ++YN+LI  L R+  V EA
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + L   +    + P V +YNI+I G  K  R+NE+ E+ + + + G +P+  TY + I+G
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337

Query: 484 IGYGGWRAEAM 494
           +   G   +A+
Sbjct: 338 LCKAGRVEDAL 348



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 159/276 (57%), Gaps = 5/276 (1%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  +  +LLR+LL  GK E+  + + +++ +GL  ++ T++I IS LCR  +  DA  V
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               ++ G  P+  +Y+ L+S  C  GR+  A    + MI  G  PD+V YNT+L  FCK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D+AL+IF+     G  P+V +YN + +    +     A  ++  M+S+ + PD +T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT-RRINESIEVLAAM 465
           YNSL++ LC++G VDEA  L+VD     F P VI+Y+ +I G C+  RR+  + ++L  M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              GCKP+  +Y  LI G+      +EA++L  +++
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +  + +E+      +V +G +PD +  T  I    +  +   A+ +++ +++ G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV ++NA+I+G CK  +++ A  +L  + ++G SP+ +++N +I   C  G  + A 
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK---KGMVGQAFQFVR 218
             F ++L+   KPTV+TY IL+                   G+CK   +G + +A     
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVD------------------GLCKARQEGRIKEAITLFD 460

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++  +G  PDV++Y+ L+  L   GK ++  +L+  M ++G  PNV TY+ LIS LC   
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A+++  A  EKG  PD  +Y  +ISA CK   +D A+   D  +  G +P    Y 
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580

Query: 339 TILAAFCKNGNADQALEIFE 358
           +++   C     D+AL++ +
Sbjct: 581 SLIDGLCAVARVDEALKLLQ 600



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 36/207 (17%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +PDAY+   L+ +  K G+++ A  F++ ++  G L DI  +N  ++  C+      A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQT 71

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +F+                                    M   G  P+ ITYN+L+S LC
Sbjct: 72  VFDG-----------------------------------MRKHGFWPNRITYNALLSGLC 96

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G + +A  L   M    + P V++YN ++ GFCK  +++E++++     ++G  P+  
Sbjct: 97  NGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVV 156

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
           TY  LI G        EA  +   +VS
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVS 183


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/472 (32%), Positives = 247/472 (52%), Gaps = 18/472 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    RAGK++ +L  +  M A GCKP++     L+    +  + ++A+R++  +   G
Sbjct: 50  LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV  YN LIS   KA ++  A  +   +R RG  PD  TYN +I  L   G  + A 
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++ +++ R  C P V+TY+ LI     +G+T KA KL  EM                  +
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G V  A + +  ++ RG +P V++YN L+     +G   E   L+ EM   G +P+V
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTYS LI+ L +  + ++A  VL+  +++G  PD  +Y+ LI+   K G L+ A    D 
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M S GC PD+V Y+T++ A  K    + A  +FE++  VG  P++ +Y ++ + L  +G 
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  + SEM  KG+ PD ITYN+ ++ L R G   EA  +  DM+ +   P V +Y+ 
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++LG  KT+ ++++  +L  + E+GC  +   +   +E +   G   EA EL
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHEL 521



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 239/458 (52%), Gaps = 19/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    +AG+ +E+    E + A    PDVV  + LI    +  K   A+ V+  ++
Sbjct: 12  YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+++ YN L+    KA Q + A ++L  +R  G  PDV TYN +I +L   G + 
Sbjct: 72  AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF +F ++    C P   TY  LI      G++ KAM+LL+EM                
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM---------------- 175

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             E  GC PDV++Y+ L+  L   G+  +  KL  EM  RG +P+ +T++ L+ +L + G
Sbjct: 176 --ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + +DA+++L   KE+G+ P   +Y+ LI+ + K G L  A   LD M  +GC PD+V Y+
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K    D+A ++ +K+   GCPP+  +YNT+ + L  +G    A  +   M SK
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY++LI+ L +   V+ A  L  +MES   +P + +Y  II    K  +++++
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + + M  KG  P+  TY   +  +G GG   EA ++
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 247/513 (48%), Gaps = 22/513 (4%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           +T+V C+         +   AE R N  +   DV+   +  LI    +AG+  E+     
Sbjct: 83  NTLVDCLGKAGQFDEALRLLAEMRDNGCVP--DVR--TYNCLISTLGKAGRLSEAFTLFA 138

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            M   GC PD      LI    +  +S KA+ ++E +E++G  PDV  Y++LI+G  K  
Sbjct: 139 EMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDG 198

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +   A K+   ++ RG  PD +T+  ++ +L   G ++ A ++ D++     KP V+TY 
Sbjct: 199 ETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYN 258

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            LI      G   +A  LLDEM                 G+ K   + +A Q ++ +E  
Sbjct: 259 ALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE 318

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC PD I+YN L+  L   G   +  +L   M S+G  P+VVTYS LI++L +  + E A
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +    +  G+ PD ++Y  +I+   K G++D A      M   G  PD++ YN  L +
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             + G   +A +IFE + + G  P+V++Y+ +   L  + +   A G++ E++ +G   D
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            + ++  +  L   G VDEA  LL    S    P   SYN +I    K  R++E+   L 
Sbjct: 499 SLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLE 558

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + E+G KP+  +Y  LI  +G  G    A EL
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFEL 591



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 245/470 (52%), Gaps = 18/470 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+  +++  +E M  +GC PDV+  + LI    ++ ++ KA ++ + ++
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +PD   + AL+    KA +++ A ++LD ++ RG  P VVTYN +I      G + 
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+ + D++ R+ CKP V+TY+ LI   +   Q D+A ++L +M                
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K G++  A +    ++S+GC PDV++Y+ L+  L    + E    L  EM S G++
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P++ TY  +I+ L + G+ +DA  +    + KGL+PD  +Y+  +++  + GR   A + 
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + M   G LPD+  Y+ +L    K    D A  + ++L + GC  +   ++     L S
Sbjct: 452 FEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTS 511

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G+   A  ++    SKG+ P   +YN+LI  L + G V EA   L D++    +P ++S
Sbjct: 512 WGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS 571

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           Y+ +I    +T +I+ + E+L  M ++G K +  +Y  L+  +   G RA
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWGARA 621



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 218/408 (53%), Gaps = 17/408 (4%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           ++ +  P+V  YN+L++   KA Q E A  + + L++  ++PDVV+Y+ +I SL   G  
Sbjct: 1   MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E+A +V  ++    CKP + TY  L+      GQ D+A++LL EM               
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              + K G + +AF     +  RGC PD  +YN L+  L  +G+ ++  +L+ EM   G 
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+V+TYS LI+ L +DG+T  A  + +  K +G  PD+ ++  L+ A  K GR+D A+E
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            LD M   G  P +V YN ++A F K G+  +A  + +++   GC P+V +Y+ + + L 
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     A  ++ +M  +G  PD ITYN+LI+ L + G++++A  L   M+S    P V+
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +Y+ +I    K  R+  +  +   M   G +P+  TY  +I  +G  G
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 207/369 (56%), Gaps = 19/369 (5%)

Query: 135 RGF-SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           +GF SP+VVTYN ++ +L   G  E A  +F++L      P V++Y+ LI +    G+ +
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
            A++++ EM                  +++GC+P++ +YN L+  L   G+++E  +L+ 
Sbjct: 62  AALEVVAEM------------------QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLA 103

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM   G  P+V TY+ LIS+L + G+  +A  +    +E+G  PD ++Y+ LI    K G
Sbjct: 104 EMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVG 163

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R   A+E L+ M   GC PD++ Y++++    K+G   +A ++F+++   G  P+  ++ 
Sbjct: 164 RSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFT 223

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +  AL  +G    AL ++ EM  +G++P  +TYN+LI+   + G + EA  LL +M+  
Sbjct: 224 ALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P V++Y+ +I G  K  +++E+ +VL  M ++GC P+  TY  LI G+G  G   +A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343

Query: 494 MELANALVS 502
             L + + S
Sbjct: 344 GRLFDRMKS 352


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/448 (32%), Positives = 239/448 (53%), Gaps = 21/448 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G F ++      M   G  PDV   T  +K F    +   A+R++  +   G E +  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 110 NALISGFCKAN-QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
            A+ISGF K N QIE A  + D +  +G  PD++T+N +I  LC +G ++ + K+F +++
Sbjct: 185 CAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P + T+ I IQ                  G+C+KG + +A + + S+ S G  PD
Sbjct: 244 KRGVCPNLFTFNIFIQ------------------GLCRKGAIDEAARLLESIVSEGLTPD 285

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           VISYN L+       K  E E  + +M++ G+EPN  TY+ +I+  C+ G  ++A  +LR
Sbjct: 286 VISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
            A  KG  PD ++Y  LI+  C DG ++ A+      +  G    I+ YNT++    K G
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              QAL++ + + + GC P++ +YN + + L   G    A G++++ ++KG  PD  T+N
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C+   +D+A+ +L  M S    P VI+YN ++ G CK R+++  ++   AM EK
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           GC PN  TY +LIE        +EAMEL
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMEL 553



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 227/445 (51%), Gaps = 20/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    + G   ES      ++  G  P++      I+   ++   ++A R++E + 
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV +YN LI GFCK +++  A   L ++ + G  P+  TYN +I   C  GM++
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A K+    +     P   TY+ LI     +G  ++AM +                 F  
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV-----------------FYE 381

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++E +G +  +I YN L++ L   G   +  +LM +M+  G  P++ TY+++++ LC+ G
Sbjct: 382 AME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA  +L  A  KG  PD ++++ LI  YCK   +D AIE LD M+S G  PD++ YN
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+L   CK    D  ++ F+ + + GC PN+ +YN +  +         A+ +  EM ++
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINE 457
           G+ PD +T  +LI  LC +G +D+A  L V +E   +F  +   +NI+I  FC+   ++ 
Sbjct: 561 GLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSM 620

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIE 482
           + ++   M    C P+  TY ++I+
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 229/459 (49%), Gaps = 19/459 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F   I+   R G  DE+   +ES+V+ G  PDV+    LI  F +  K  +A   +  + 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+ F YN +I+GFCKA  ++ A+K+L     +GF PD  TY+ +I  LC+ G + 
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VF + +    K ++I Y  L++    +G   +A++L+ +M                
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G +  A   +    ++GC PD+ ++N L+         ++  +++  M+S G+ 
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+TY+ L++ LC+  K ++ VD  +A  EKG TP+  +Y+ LI ++CKD ++  A+E 
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALW 380
              M + G  PDIV   T++   C NG  D+A E+F  +  +     + + +N M +A  
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
              +   A  +  +M      PD  TY  +I   C+ G +D A   L++  S    P+  
Sbjct: 614 EKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFT 673

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +   ++   C T R++E++ ++  M + G  P E   + 
Sbjct: 674 TCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVNSIF 712



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 203/399 (50%), Gaps = 18/399 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++  + +  +++ A  V +R+      P V +YN ++  L   G    A KV+ ++
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P V T+TI +++  + G+   A++LL+ M                    +GC+ 
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM------------------PGQGCEF 179

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +SY  ++          E   L  EM+ +G+ P+++T++ LI  LC+ G  +++  + 
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G+ P+ ++++  I   C+ G +D A   L+ ++S+G  PD+++YNT++  FCK+
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +A     K+ + G  PN  +YNT+ +    +G    A  ++ + + KG  PDE TY
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           +SLI+ LC DG ++ A+ +  +     F+ ++I YN ++ G  K   + ++++++  M E
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            GC P+  TY L++ G+   G  ++A  + N  ++   I
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 179/427 (41%), Gaps = 62/427 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  +I    +AG    +   +   +  G  PD    + LI     +   N+A+ V  
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E +EK  +  +  YN L+ G  K   +  A +++  +   G SPD+ TYN+++  LC  G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A  + +  +   C P + T+  LI     +   DKA+++LD M             
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK   +       +++  +GC P++I+YN+L+ +     K  E  +L  EM +R
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDV--------------------LRAAKEK----- 293
           GL P++VT   LI  LC +G+ + A ++                    + A  EK     
Sbjct: 561 GLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSM 620

Query: 294 -----------GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
                         PD Y+Y  +I +YCK G +DLA  FL   IS G +P       +L 
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLN 680

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C      +A+ I   +   G  P     N++F A      ++ A  ++ E L   ++ 
Sbjct: 681 CLCVTHRLSEAVVIINLMVQNGIVP--EEVNSIFEA---DKKEVAAPKIVVEYL---LKK 732

Query: 403 DEITYNS 409
             ITY S
Sbjct: 733 SHITYYS 739



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 111/306 (36%), Gaps = 71/306 (23%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVL--------------------RAAKEKG---- 294
           G +  + TY  +I  L   GK E   DVL                    R    KG    
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 295 ------------LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
                         P   SY+ +++   + G    A +    M   G  PD+  +   + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           +FC  G    AL +   +   GC  N  SY  + S  +    +I A  +  EML +GI P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 403 DEITYNSLISC-----------------------------------LCRDGMVDEAVGLL 427
           D +T+N LI                                     LCR G +DEA  LL
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             + S    P VISYN +I GFCK  ++ E+   L  M   G +PNE TY  +I G    
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334

Query: 488 GWRAEA 493
           G    A
Sbjct: 335 GMMQNA 340


>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
 gi|223945693|gb|ACN26930.1| unknown [Zea mays]
 gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
          Length = 582

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 233/466 (50%), Gaps = 19/466 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG 102
           ++R    GK  ++   I+ MV +G  PD   C +LI+   +   +NKA  V+E++    G
Sbjct: 130 LRRHCNNGKLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMVLSGG 189

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD    N LI   C   Q+  A KVL+ +R  G SP  +T+N +I  +CS  + + A  
Sbjct: 190 VPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYDRAVS 249

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            + + L+    P  +T T+L+     +    +A+++LDE                  L+ 
Sbjct: 250 FWKEQLKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDE------------------LDL 291

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GCQP V+SYN L+      G  ++ + ++T + + GLEPN  TY IL+ SLC   +  +
Sbjct: 292 EGCQPHVVSYNTLISASCKAGCLKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSE 351

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             D+L   K+    PD  +Y+  I+ +C+ G LD AI+ L+ M+S+ C PDIV YNT+L 
Sbjct: 352 VGDLLAHMKQANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLN 411

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G   +AL IF  + + GC     +YNT+  AL   GD I A+ +  EM+  GI P
Sbjct: 412 AISKRGMVQEALGIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINP 471

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D++TY SLI   C+  M  EA+ LL  M +  F     +++++I   CK  +   + E+L
Sbjct: 472 DDVTYGSLIMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQALCKGCKAEAAAEIL 531

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
             M  +        Y+ ++  +   G   EA  L   L    ++ R
Sbjct: 532 RVMVSRNVNHRSAFYLSIVTRVAKSGRLKEAQILHQELYRARSLKR 577



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 131/271 (48%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y   LR   N GK  +  +++ EM+  G  P+      LI  L R G T  A  VL    
Sbjct: 126 YAYSLRRHCNNGKLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMV 185

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G  PD  + + LI   C +G+L  A++ L+ M   GC P  + +NT++   C +   D
Sbjct: 186 LSGGVPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYD 245

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+  +++   +G PP   +   +   +      +RAL ++ E+  +G +P  ++YN+LI
Sbjct: 246 RAVSFWKEQLKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDELDLEGCQPHVVSYNTLI 305

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           S  C+ G + +A  +L  + +    P   +Y I++   C  RR +E  ++LA M +   K
Sbjct: 306 SASCKAGCLKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHK 365

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+ T Y + I      G   +A+++   +VS
Sbjct: 366 PDVTAYNIFINYFCRYGHLDQAIDVLEMMVS 396


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/475 (31%), Positives = 242/475 (50%), Gaps = 34/475 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  D +L F + M   GC P+VV    LI  + + RK +    ++  +   G
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP++ +YN +I+G C+  +++  + VL  +  RG+S D VTYN +I   C  G    A 
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  ++LR    P+VITYT LI +                  MCK G + +A +F+  + 
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHS------------------MCKAGNMNRATEFLDQMR 372

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG  P+  +Y  L+      G   E  +++ EMI  G  P+VVTY+ LI+  C  GK  
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA+ VL   KEKGLTPD  SY  ++S +C+   +D A+     M++ G  PD + Y++++
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC+     +A ++F+++  VG PP+  +Y  + +A    GD  +A+ + +EM+ KG+ 
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII--------------- 446
           PD +TY+ LI+ L +     EA  LL+ +      P+ ++Y+ +I               
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            GFC    + E+ +V  +M EK  KP+ T Y ++I G   GG   +A  L   +V
Sbjct: 613 KGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 218/415 (52%), Gaps = 20/415 (4%)

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELANKVLDRLRSRGFSPDVVTYNI 146
           +KA+ ++ + + +G  P V +YNA++    ++ + I  A  V   +     SP+V TYNI
Sbjct: 151 DKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNI 210

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I   C  G ++ A + FD++ +  C P V+TY  LI                   G CK
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID------------------GYCK 252

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              +   F+ +RS+  +G +P++ISYN+++  L   G+ +E   ++TEM  RG   + VT
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C++G    A+ +       GL+P   +Y  LI + CK G ++ A EFLD M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P+   Y T++  F + G  ++A  + +++ D G  P+V +YN + +    +G  +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ +M  KG+ PD ++Y++++S  CR   VDEA+ +   M +   +P  I+Y+ +I
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            GFC+ RR  E+ ++   M   G  P+E TY  LI      G   +A++L N +V
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 229/462 (49%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVM-EI 97
           F  ++K   R    D++L  +    A+G  P V+    ++    + +++ + A  V  E+
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+    P+VF YN LI GFC A  +++A +  DR+  +G  P+VVTYN +I   C    I
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +  F++   +     +P +I+Y ++I     EG+  +   +L EM               
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CK+G   QA      +   G  P VI+Y  L+ ++   G      + + +M  RGL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN  TY+ L+    + G   +A  VL+   + G +P   +Y+ LI+ +C  G++  AI 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+ M   G  PD+V+Y+T+L+ FC++ + D+AL +  K+   G  P+  +Y+++     
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                  A  +  EML  G+ PDE TY +LI+  C +G + +A+ L  +M      P V+
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +Y+++I G  K  R  E+  +L  +F +   P++ TY  LIE
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 210/394 (53%), Gaps = 19/394 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN-IMIGSLCSRGMIESAFKVFDQL 167
           ++ ++  + +   I+ A  ++   ++ GF P V++YN ++  ++ S+  I  A  VF ++
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+    P V TY ILI+   L G  D A++  D M                  E +GC P
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRM------------------EKKGCLP 238

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++YN L+     + K ++G +L+  M  +GLEPN+++Y+++I+ LCR+G+ ++   VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G + D  +Y+ LI  YCK+G    A+     M+  G  P ++ Y +++ + CK 
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++A E  +++   G  PN  +Y T+       G    A  ++ EM+  G  P  +TY
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI+  C  G + +A+ +L DM+     P V+SY+ ++ GFC++  ++E++ V   M  
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG KP+  TY  LI+G        EA +L + ++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 6/287 (2%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R+   DE+L     MVA G KPD +  + LI+ F ++R++ +A  + + + + G  PD F
Sbjct: 462 RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF 521

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI+ +C    ++ A ++ + +  +G  PDVVTY+++I  L  +     A ++  +L
Sbjct: 522 TYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581

Query: 168 LRDNCKPTVITYTILIQ-ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
             +   P+ +TY  LI+  + +E ++   + L+   G C KGM+ +A Q   S+  +  +
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKS--VVSLIK--GFCMKGMMTEADQVFESMLEKNHK 637

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  +YN+++      G   +   L  EM+  G   + VT   L+ +L ++GK  +   V
Sbjct: 638 PDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSV 697

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           +          +A     L+    ++G +D+ ++ L  M  DG LP+
Sbjct: 698 IANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 147/448 (32%), Positives = 239/448 (53%), Gaps = 21/448 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G F ++      M   G  PDV   T  +K F    +   A+R++  +   G E +  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 110 NALISGFCKAN-QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
            A+ISGF K N QIE A  + D +  +G  PD++T+N +I  LC +G ++ + K+F +++
Sbjct: 185 CAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P + T+ I IQ                  G+C+KG + +A + + S+ S G  PD
Sbjct: 244 KRGVCPNLFTFNIFIQ------------------GLCRKGAIDEAARLLESIVSEGLTPD 285

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           VISYN L+       K  E E  + +M++ G+EPN  TY+ +I+  C+ G  ++A  +LR
Sbjct: 286 VISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
            A  KG  PD ++Y  LI+  C DG ++ A+      +  G    I+ YNT++    K G
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              QAL++ + + + GC P++ +YN + + L   G    A G++++ ++KG  PD  T+N
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C+   +D+A+ +L  M S    P VI+YN ++ G CK R+++  ++   AM EK
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           GC PN  TY +LIE        +EAMEL
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMEL 553



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 226/445 (50%), Gaps = 20/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    + G   ES      ++  G  P++      I+   ++   ++A R++E + 
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV +YN LI GFCK +++  A   L ++ + G  P+  TYN +I   C  GM++
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A K+    +     P   TY+ LI     +G  ++AM +                 F  
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV-----------------FYE 381

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++E +G +  +I YN L++ L   G   +  +LM +M+  G  P++ TY+++++ LC+ G
Sbjct: 382 AME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA  +L  A  KG  PD ++++ LI  YCK   +D AIE LD M+S G  PD++ YN
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+L   CK    D  ++ F+ + + GC PN+ +YN +  +         A+ +  EM ++
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINE 457
           G+ PD +T  +LI  LC +G +D+A  L V +E   +F  +   +NI+I  FC    ++ 
Sbjct: 561 GLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSM 620

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIE 482
           + ++   M    C P+  TY ++I+
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 226/450 (50%), Gaps = 19/450 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  DE+   +ES+V+ G  PDV+    LI  F +  K  +A   +  +   G EP+ F
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I+GFCKA  ++ A+K+L     +GF PD  TY+ +I  LC+ G +  A  VF + 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    K ++I Y  L++    +G   +A++L+ +M                 G+CK G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +    ++GC PD+ ++N L+         ++  +++  M+S G+ P+V+TY+ L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+  K ++ VD  +A  EKG TP+  +Y+ LI ++CKD ++  A+E    M + G 
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            PDIV   T++   C NG  D+A E+F  +  +     + + +N M +A     +   A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  +M      PD  TY  +I   C+ G +D A   L++  S    P+  +   ++   
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           C T R++E++ ++  M + G  P E   + 
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEEVNSIF 712



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 203/399 (50%), Gaps = 18/399 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++  + +  +++ A  V +R+      P V +YN ++  L   G    A KV+ ++
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P V T+TI +++  + G+   A++LL+ M                    +GC+ 
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM------------------PGQGCEF 179

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +SY  ++          E   L  EM+ +G+ P+++T++ LI  LC+ G  +++  + 
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G+ P+ ++++  I   C+ G +D A   L+ ++S+G  PD+++YNT++  FCK+
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +A     K+ + G  PN  +YNT+ +    +G    A  ++ + + KG  PDE TY
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           +SLI+ LC DG ++ A+ +  +     F+ ++I YN ++ G  K   + ++++++  M E
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            GC P+  TY L++ G+   G  ++A  + N  ++   I
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 173/388 (44%), Gaps = 64/388 (16%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F E+M   G K  +++   L+K   ++    +A+++M+ + ++G  PD++ YN +++G C
Sbjct: 379 FYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K   +  AN +L+   ++G  PD+ T+N +I   C +  ++ A ++ D +L     P VI
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY  L+                   G+CK   +       +++  +GC P++I+YN+L+ 
Sbjct: 498 TYNTLLN------------------GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK---- 293
           +     K  E  +L  EM +RGL P++VT   LI  LC +G+ + A ++    +++    
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599

Query: 294 --------------------------------GLTPDAYSYDPLISAYCKDGRLDLAIEF 321
                                              PD Y+Y  +I +YCK G +DLA  F
Sbjct: 600 YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L   IS G +P       +L   C      +A+ I   +   G  P     N++F A   
Sbjct: 660 LLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP--EEVNSIFEA--- 714

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNS 409
              ++ A  ++ E L   ++   ITY S
Sbjct: 715 DKKEVAAPKIVVEYL---LKKSHITYYS 739



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 111/306 (36%), Gaps = 71/306 (23%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVL--------------------RAAKEKG---- 294
           G +  + TY  +I  L   GK E   DVL                    R    KG    
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 295 ------------LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
                         P   SY+ +++   + G    A +    M   G  PD+  +   + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           +FC  G    AL +   +   GC  N  SY  + S  +    +I A  +  EML +GI P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 403 DEITYNSLISC-----------------------------------LCRDGMVDEAVGLL 427
           D +T+N LI                                     LCR G +DEA  LL
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             + S    P VISYN +I GFCK  ++ E+   L  M   G +PNE TY  +I G    
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334

Query: 488 GWRAEA 493
           G    A
Sbjct: 335 GMMQNA 340


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 230/465 (49%), Gaps = 47/465 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           R G+ DE+L  +  M  +GC PD V+                                  
Sbjct: 187 RLGRADEALALLRGMARHGCVPDAVL---------------------------------- 212

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +I   C    +  A  +L+ +   G + DV T++ ++  +C  G +  A ++ D+++
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQ 215
              C P V+TY  L+Q      Q D+A  +L  +             G   +G + +A +
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATE 332

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
              ++  +GCQPD  +Y++L+  L  +G+     +L+ EM  +G  PNVVTY+I++ S C
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 392

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G  +D   +L     KGLT ++  Y+ +I A CKDGR+D A+  +  M S GC PDI 
Sbjct: 393 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YNTI+   C N   ++A  +FE L + G   N  +YNT+  AL   G    A+ +  EM
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G   D ++YN LI  +C+DG VD ++ LL +M     +P  +SYNI+I   CK RR+
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 572

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +++E+   M  +G  P+  TY  LI G+   GW   A+ L   L
Sbjct: 573 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 178/362 (49%), Gaps = 23/362 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I      GK  E+    E+M   GC+PD    + L+    +  +   AVR++  +E
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 373

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+V  Y  ++  FCK    +    +L+ + ++G + +   YN MI +LC  G ++
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++    C P + +Y  +I                    +C    + +A     
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYH------------------LCNNEQMEEAEHMFE 475

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +L   G   + I+YN ++  LL  G+W++  +L  EMI  G   +VV+Y+ LI ++C+DG
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + ++ +L    EKG+ P+  SY+ LIS  CK+ R+  A+E    M++ G  PDIV YN
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK G    AL + EKL +    P++ +YN + S  W    K+R L   + +L++
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS--WHC--KVRLLDDAAMLLNR 651

Query: 399 GI 400
            +
Sbjct: 652 AM 653



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 204/429 (47%), Gaps = 36/429 (8%)

Query: 89  NKAVRVMEIL-EKYG-EPDVFAYNALISGF----CKANQIELANKVLDRLRSRGFSPDVV 142
            +A+ +++ L  ++G +P   +YN ++S      C A+ + L  +++ R R     P   
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDR---VPPTTF 176

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T+ +   +LC  G  + A  +   + R  C P  + Y  +I A   +G   +A  LL+EM
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +                   GC  DV +++ ++R +  +G+  E  +L+  M+++G  P
Sbjct: 237 LLM------------------GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 278

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            V+TY  L+  LCR  + ++A  +L    E     +   ++ +I     +G+L  A E  
Sbjct: 279 GVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELY 334

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   GC PD   Y+ ++   CK G    A+ +  ++   G  PNV +Y  +  +   +
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 394

Query: 383 G--DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           G  D  RAL  + EM +KG+  +   YN +I  LC+DG +DEA+GL+ +M S    P + 
Sbjct: 395 GMWDDTRAL--LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SYN II   C   ++ E+  +   + E+G   N  TY  +I  +   G   +A+ LA  +
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512

Query: 501 VSMHAISRD 509
           + +H  S D
Sbjct: 513 I-LHGCSLD 520



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H  S DV    +  LIK   + G  D SL  +E M   G KP+ V    LI +  +ER+ 
Sbjct: 515 HGCSLDV--VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 572

Query: 89  NKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             A+ +  ++L +   PD+  YN LI+G CK   +  A  +L++L +    PD++TYNI+
Sbjct: 573 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNC 172
           I   C   +++ A  + ++ +   C
Sbjct: 633 ISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     R  ++D  L F + M  NG + D+   T +I  + +++K   A  V+    
Sbjct: 102 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 161

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EPD   ++ L++GFC   ++  A  ++DR+      PD+VT + +I  LC +G + 
Sbjct: 162 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 221

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++    +P  +TY  ++      G +  A+ L  +M                
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 281

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK G    A      +E +G + DV++Y+ L+  L N GKW++G K++ EMI R + 
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVT+S LI    ++GK  +A ++      +G+ PD  +Y+ LI  +CK+  L  A + 
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M+S GC PDIV Y+ ++ ++CK    D  + +F ++S  G  PN  +YNT+      
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG    A  +  EM+S+G+ P  +TY  L+  LC +G +++A+ +   M+ +R    +  
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           YNIII G C   +++++  +  ++ +KG KP+  TY ++I G+   G  +EA
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 231/470 (49%), Gaps = 18/470 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L ++     F  L+      G+  E++  ++ MV    +PD+V  + LI     + + ++
Sbjct: 163 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 222

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ +++ + +YG +PD   Y  +++  CK+    LA  +  ++  R     VV Y+I+I 
Sbjct: 223 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 282

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           SLC  G  + A  +F+++     K  V+TY+ LI     +G+ D   K+L EM       
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K+G + +A +    + +RG  PD I+YN L+          E  ++ 
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M+S+G EP++VTYSILI+S C+  + +D + + R    KGL P+  +Y+ L+  +C+ 
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+L+ A E    M+S G  P +V Y  +L   C NG  ++ALEIFEK+        +  Y
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N +   + ++     A  +   +  KG++PD +TYN +I  LC+ G + EA  L   M+ 
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
               P   +YNI+I        +  S+E++  M   G   + +T  ++I+
Sbjct: 583 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 222/446 (49%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K ++++   ESM+ +   P  +   +L     + ++ +  +   + +E  G E D++   
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ +C+  ++  A  VL R    G+ PD +T++ ++   C  G +  A  + D+++  
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P ++T + LI                   G+C KG V +A   +  +   G QPD +
Sbjct: 199 KQRPDLVTVSTLIN------------------GLCLKGRVSEALVLIDRMVEYGFQPDEV 240

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  +L  L   G       L  +M  R ++ +VV YSI+I SLC+DG  +DA+ +    
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           + KG+  D  +Y  LI   C DG+ D   + L  MI    +PD+V ++ ++  F K G  
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A E++ ++   G  P+  +YN++            A  M   M+SKG EPD +TY+ L
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 420

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  C+   VD+ + L  ++ S    P  I+YN ++LGFC++ ++N + E+   M  +G 
Sbjct: 421 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 480

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
            P+  TY +L++G+   G   +A+E+
Sbjct: 481 PPSVVTYGILLDGLCDNGELNKALEI 506



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 19/378 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
            Q+  +I    + G FD++L     M   G K DVV  + LI     + K +   +++ E
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 334

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ +   PDV  ++ALI  F K  ++  A ++ + + +RG +PD +TYN +I   C    
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++FD ++   C+P ++TY+ILI +                   CK   V    + 
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINS------------------YCKAKRVDDGMRL 436

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            R + S+G  P+ I+YN L+      GK    ++L  EM+SRG+ P+VVTY IL+  LC 
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+   A+++    ++  +T     Y+ +I   C   ++D A      +   G  PD+V 
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 556

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   CK G+  +A  +F K+ + GC P+  +YN +  A       I ++ +I EM 
Sbjct: 557 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 616

Query: 397 SKGIEPDEITYNSLISCL 414
             G   D  T   +I  L
Sbjct: 617 VCGFSADSSTIKMVIDML 634



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR  +   K  +   L   MI     P  + ++ L S++ R  + +  +   + 
Sbjct: 65  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 124

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +  G+  D Y+   +I+ YC+  +L  A   L      G  PD + ++T++  FC  G 
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A+ + +++ ++   P++ + +T+ + L   G    AL +I  M+  G +PDE+TY  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ LC+ G    A+ L   ME    + +V+ Y+I+I   CK    ++++ +   M  KG
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 470 CKPNETTYVLLIEGI-GYGGW 489
            K +  TY  LI G+   G W
Sbjct: 305 IKADVVTYSSLIGGLCNDGKW 325



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 98/202 (48%)

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +T    SY   +     D +++ AI+  + MI    LP  +++N + +A  +    D  L
Sbjct: 60  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 119

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
              + +   G   ++ +   M +        + A  ++      G EPD IT+++L++  
Sbjct: 120 GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 179

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C +G V EAV L+  M   + RP +++ + +I G C   R++E++ ++  M E G +P+E
Sbjct: 180 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 239

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY  ++  +   G  A A++L
Sbjct: 240 VTYGPVLNRLCKSGNSALALDL 261


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 245/477 (51%), Gaps = 18/477 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KF+  +   E M   G   D+   +  I  F +  + + A+ V+  
Sbjct: 84  VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EPD+   ++L++G+C + +I  A  ++D++   G+ PD  T+  +I  L     
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + DQ+++  C+P ++TY  ++      G  D A+ LL +M              
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK   +  A      ++++G +PDV +Y+ L+  L N G+W +  +L+++MI R 
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNVVT+S LI +  ++GK  +A  +     ++ + PD ++Y  LI+ +C   RLD A 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + MIS  C P++V Y+T++  FCK    ++ +E+F ++S  G   N  +Y T+    
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           + + D   A  +  +M+S G+ P+ +TYN L+  LC++G + +A+ +   ++ +   P +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +YNI+I G CK  ++ +  E+   +  KG  PN   Y  +I G    G + EA  L
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 202/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+PD+V    ++    +    + A+ +++ +E
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K   E DV  YN +I G CK   ++ A  +   + ++G  PDV TY+ +I  LC+ G   
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P V+T++ LI A + EG+  +A KL DEM                
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A      + S+ C P+V++Y+ L++      + EEG +L  EM  RGL 
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            N VTY+ LI    +    ++A  V +     G+ P+  +Y+ L+   CK+G+L  A+  
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            +Y+      PDI  YN ++   CK G  +   E+F  LS  G  PNV +YNTM S    
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            G K  A  ++ +M   G  P+  TYN+LI    RDG  + +  L+ +M S  F
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 53/375 (14%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  +F  +++    P+++ +  L+ A     + +  + L ++M              
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-------------- 109

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               ++ G   D+ +Y++ +       +      ++ +M+  G EP++VT S L++  C 
Sbjct: 110 ----QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  DAV ++    E G  PD +++  LI       +   A+  +D M+  GC PD+V 
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y T++   CK G+ D AL + +K+       +V  YNT+   L        AL + +EM 
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI---------------- 440
           +KGI PD  TY+SLISCLC  G   +A  LL DM   +  P V+                
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345

Query: 441 -------------------SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
                              +Y+ +I GFC   R++E+  +   M  K C PN  TY  LI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405

Query: 482 EGIGYGGWRAEAMEL 496
           +G        E MEL
Sbjct: 406 KGFCKAKRVEEGMEL 420



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 142/260 (54%), Gaps = 2/260 (0%)

Query: 232 YNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           Y  +LR  L ++ K ++   L  +M+     P++V ++ L+S++ +  K E  + +    
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D Y+Y   I+ +C+  +L LA+  L  M+  G  PDIV  +++L  +C +   
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             A+ + +++ ++G  P+  ++ T+   L+       A+ ++ +M+ +G +PD +TY ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC+ G +D A+ LL  ME  +    V+ YN II G CK + +++++ +   M  KG 
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289

Query: 471 KPNETTYVLLIEGI-GYGGW 489
           +P+  TY  LI  +  YG W
Sbjct: 290 RPDVFTYSSLISCLCNYGRW 309



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 22/275 (8%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE+ +  E M++  C P+VV  + LIK F + ++  + + +   + + G   +   Y 
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI GF +A   + A  V  ++ S G  P+++TYNI++  LC  G +  A  VF+ L R 
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY I+I+                  GMCK G V   ++   +L  +G  P+VI
Sbjct: 498 TMEPDIYTYNIMIE------------------GMCKAGKVEDGWELFCNLSLKGVSPNVI 539

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN ++      G  EE + L+ +M   G  PN  TY+ LI +  RDG  E + ++++  
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +  G   DA S   L++    DGRLD +  FLD +
Sbjct: 600 RSCGFAGDA-STIGLVTNMLHDGRLDKS--FLDML 631


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 260/487 (53%), Gaps = 29/487 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +L  +  M  +GC P+ V+   LI    +  + N+A++++E +   G  PD   +N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK ++I  A K+++R+  RGF+PD +TY  ++  LC  G +++A  +F ++     
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI----P 343

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAF 214
           KPT + +  LI   +  G+ D A  +L +M                  G  KKG+VG A 
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + +R + ++GC+P+V SY +L+     +GK +E   L+ EM + GL+PN V ++ LIS+ 
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++ +  +AV++ R    KG  PD Y+++ LIS  C+   +  A+  L  MIS+G + + 
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YNT++ AF + G   +A ++  ++   G   +  +YN++   L  +G+  +A  +  +
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           ML  G+ P  I+ N LI+ LCR GMV+EAV    +M      P ++++N +I G C+  R
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           I + + +   +  +G  P+  TY  L+  +  GG+  +A  L +  +       D F   
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGI------EDGFVPN 697

Query: 515 NRTFPLL 521
           +RT+ +L
Sbjct: 698 DRTWSIL 704



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 219/448 (48%), Gaps = 49/448 (10%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP   +YN ++      N  ++A  V   + SR   P + T+ +++ +LC+   ++SA  
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V   + +  C P  + Y  LI +     + ++A++LL+EM                 G+C
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISY-------------------------------NM 234
           K   + +A + V  +  RG  PD I+Y                               N 
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352

Query: 235 LLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           L+   +  G+ ++ + ++++M+ S G+ P+V TY+ LI    + G    A++VLR  + K
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  P+ YSY  L+  +CK G++D A   L+ M +DG  P+ V +N +++AFCK     +A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           +EIF ++   GC P+V ++N++ S L    +   AL ++ +M+S+G+  + +TYN+LI+ 
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 532

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             R G + EA  L+ +M         I+YN +I G C+   ++++  +   M   G  P+
Sbjct: 533 FLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALV 501
             +  +LI G+   G   EA+E    +V
Sbjct: 593 SISCNILINGLCRSGMVEEAVEFQKEMV 620



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 190/384 (49%), Gaps = 20/384 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI      G+ D++   +  MV + G  PDV     LI  ++++     A+ V+  +
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
              G +P+V++Y  L+ GFCK  +I+ A  +L+ + + G  P+ V +N +I + C    I
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++F ++ R  CKP V T+  LI                   G+C+   +  A   +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLIS------------------GLCEVDEIKHALWLL 511

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R + S G   + ++YN L+   L  G+ +E  KL+ EM+ +G   + +TY+ LI  LCR 
Sbjct: 512 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRA 571

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ + A  +       GL P + S + LI+  C+ G ++ A+EF   M+  G  PDIV +
Sbjct: 572 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 631

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++   C+ G  +  L +F KL   G PP+  +YNT+ S L   G    A  ++ E + 
Sbjct: 632 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIE 691

Query: 398 KGIEPDEITYNSLISCLCRDGMVD 421
            G  P++ T++ L+  L     +D
Sbjct: 692 DGFVPNDRTWSILLQSLVPQETLD 715



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 162/331 (48%), Gaps = 18/331 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   ++ G    +L  +  M   GCKP+V   T L+  F +  K ++A  ++  + 
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+   +N LIS FCK ++I  A ++   +  +G  PDV T+N +I  LC    I+
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   ++ +      +TY  LI A +  G+  +A KL++EM                
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C+ G V +A      +   G  P  IS N+L+  L   G  EE  +   EM+ RG  
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P++VT++ LI+ LCR G+ ED + + R  + +G+ PD  +Y+ L+S  CK G +  A   
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           LD  I DG +P+   ++ +L +       D+
Sbjct: 686 LDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 175/369 (47%), Gaps = 24/369 (6%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +G+      Y ++IG L S G     FK  D+LL       ++    L  + M +   D
Sbjct: 98  QKGYRHSFDVYQVLIGKLGSNG----EFKTIDRLLMQMKDEGIVFKESLFISIMRD--YD 151

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
           KA            G  GQ  + +  + +   C+P   SYN++L  L++    +    + 
Sbjct: 152 KA------------GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 199

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M+SR + P + T+ +++ +LC   + + A+ VLR   + G  P++  Y  LI +  K 
Sbjct: 200 YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKC 259

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R++ A++ L+ M   GC+PD   +N ++   CK    ++A ++  ++   G  P+  +Y
Sbjct: 260 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITY 319

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-E 431
             + + L     KI  +    ++  +  +P  + +N+LI      G +D+A  +L DM  
Sbjct: 320 GYLMNGLC----KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVT 375

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           S    P V +YN +I G+ K   +  ++EVL  M  KGCKPN  +Y +L++G    G   
Sbjct: 376 SYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKID 435

Query: 492 EAMELANAL 500
           EA  L N +
Sbjct: 436 EAYNLLNEM 444



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  LIK   RAG+ D++    E M+ +G  P  + C  LI    +     +AV  
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEF 615

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
             E++ +   PD+  +N+LI+G C+A +IE    +  +L++ G  PD VTYN ++  LC 
Sbjct: 616 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G +  A  + D+ + D   P   T++IL+Q+ + +   D+
Sbjct: 676 GGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 9/175 (5%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++     NG       +  ++ D G    +    ++F ++    DK    G  + ++
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEG----IVFKESLFISIMRDYDKAGFPGQTTRLM 163

Query: 397 SK-----GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            +       EP   +YN ++  L        A  +  DM S +  PT+ ++ +++   C 
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCA 223

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
              ++ ++ VL  M + GC PN   Y  LI  +       EA++L   +  M  +
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 278


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 230/465 (49%), Gaps = 47/465 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           R G+ DE+L  +  M  +GC PD V+                                  
Sbjct: 171 RLGRADEALALLRGMARHGCVPDAVL---------------------------------- 196

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +I   C    +  A  +L+ +   G + DV T++ ++  +C  G +  A ++ D+++
Sbjct: 197 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 256

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQ 215
              C P V+TY  L+Q      Q D+A  +L  +             G   +G + +A +
Sbjct: 257 TKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATE 316

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
              ++  +GCQPD  +Y++L+  L  +G+     +L+ EM  +G  PNVVTY+I++ S C
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 376

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G  +D   +L     KGLT ++  Y+ +I A CKDGR+D A+  +  M S GC PDI 
Sbjct: 377 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 436

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YNTI+   C N   ++A  +FE L + G   N  +YNT+  AL   G    A+ +  EM
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G   D ++YN LI  +C+DG VD ++ LL +M     +P  +SYNI+I   CK RR+
Sbjct: 497 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 556

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +++E+   M  +G  P+  TY  LI G+   GW   A+ L   L
Sbjct: 557 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 178/362 (49%), Gaps = 23/362 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I      GK  E+    E+M   GC+PD    + L+    +  +   AVR++  +E
Sbjct: 298 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 357

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+V  Y  ++  FCK    +    +L+ + ++G + +   YN MI +LC  G ++
Sbjct: 358 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 417

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++    C P + +Y  +I                    +C    + +A     
Sbjct: 418 EAMGLIQEMRSQGCNPDICSYNTIIYH------------------LCNNEQMEEAEHMFE 459

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +L   G   + I+YN ++  LL  G+W++  +L  EMI  G   +VV+Y+ LI ++C+DG
Sbjct: 460 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 519

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + ++ +L    EKG+ P+  SY+ LIS  CK+ R+  A+E    M++ G  PDIV YN
Sbjct: 520 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 579

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK G    AL + EKL +    P++ +YN + S  W    K+R L   + +L++
Sbjct: 580 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS--WHC--KVRLLDDAAMLLNR 635

Query: 399 GI 400
            +
Sbjct: 636 AM 637



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 186/398 (46%), Gaps = 30/398 (7%)

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G  +A +  L  +++ R R     P   T+ +   +LC  G  + A  +   + R  C 
Sbjct: 135 GGLPRARRFALYRRMVHRDR---VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV 191

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P  + Y  +I A   +G   +A  LL+EM +                   GC  DV +++
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLM------------------GCAADVNTFD 233

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            ++R +  +G+  E  +L+  M+++G  P V+TY  L+  LCR  + ++A  +L    E 
Sbjct: 234 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL 293

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
               +   ++ +I     +G+L  A E  + M   GC PD   Y+ ++   CK G    A
Sbjct: 294 ----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSA 349

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLI 411
           + +  ++   G  PNV +Y  +  +   +G  D  RAL  + EM +KG+  +   YN +I
Sbjct: 350 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL--LEEMSAKGLTLNSQGYNGMI 407

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+DG +DEA+GL+ +M S    P + SYN II   C   ++ E+  +   + E+G  
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            N  TY  +I  +   G   +A+ LA  ++ +H  S D
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMI-LHGCSLD 504



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H  S DV    +  LIK   + G  D SL  +E M   G KP+ V    LI +  +ER+ 
Sbjct: 499 HGCSLDV--VSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 556

Query: 89  NKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             A+ +  ++L +   PD+  YN LI+G CK   +  A  +L++L +    PD++TYNI+
Sbjct: 557 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 616

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNC 172
           I   C   +++ A  + ++ +   C
Sbjct: 617 ISWHCKVRLLDDAAMLLNRAMAAVC 641


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 247/494 (50%), Gaps = 26/494 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRA-----GKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           P T +LS     + F+ L+   FR+        D++L     M+     P +V   K++ 
Sbjct: 26  PGTGMLSI---PSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILT 82

Query: 81  KFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              + ++ +  + +   ++ +G P +V+  N LI+ FC  N++  A  VL ++   G  P
Sbjct: 83  SITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQP 142

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  ++  +I  LC  G I  A  +FD+++ +  +P V+ Y  LI      G T  A++LL
Sbjct: 143 DTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M                  +CK     QAF     + ++G  P++++ N L+  L N+
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+W+    L+ EM+   + PN ++ + ++ +LC++G    A DV+    + G+ PD  +Y
Sbjct: 263 GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTY 322

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             LI  +C    +D A++  D M+  GC P++ +YNT++  +CK    D+A+ +FE++  
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               PN  +YNT+   L   G    A+ +  EM++ G  PD +TY  L+  LC++  +D+
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +E +   P +  Y I+I G C+   + ++ ++ + +  KG KPN  TY ++  
Sbjct: 443 AMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTH 502

Query: 483 GIGYGGWRAEAMEL 496
           G+   G   EA +L
Sbjct: 503 GLCKRGLLDEATKL 516



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 20/473 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK     G+  E+L+  + M+  G +PDVV+   LI    +   ++ A+R++  +E
Sbjct: 147 FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSME 206

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K   +PDV  Y  LI   CK  Q   A  +   + ++G SP++VT N ++ +LC+ G  +
Sbjct: 207 KGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWK 266

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + ++++     P  I+ T ++ A                  +CK+GMV QA   V 
Sbjct: 267 HVNTLLNEMVDSKIMPNAISLTTVVDA------------------LCKEGMVAQAHDVVD 308

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G +PDV++Y  L+       + +E  K+   M+ +G  PNV +Y+ LI+  C+  
Sbjct: 309 MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE 368

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+ +      + L P+  +Y+ LI   C  GRL  AI     M++ G +PD+V Y 
Sbjct: 369 RMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYR 428

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CKN + D+A+ + + +      P++  Y  +   +  +G+   A  + S + SK
Sbjct: 429 ILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK 488

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+  TYN +   LC+ G++DEA  L ++M+         +YN I  GF +    + +
Sbjct: 489 GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRA 548

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGW-RAEAMELANALVSMHAISRDT 510
           I++L  M  +G   + +T  LL+  +   G  ++EA +L +    +    +DT
Sbjct: 549 IQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDT 601



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 123/269 (45%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           +N      L+    ++       M+     P++V ++ +++S+ +  +    + + R   
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+  + Y+ + LI+++C   R++ A   L  ++  GC PD  ++ T++   C  G   
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL +F+K+   G  P+V  Y T+ + L  +G    A+ ++  M     +PD + Y +LI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+D    +A  L  +M +    P +++ N ++   C          +L  M +    
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANAL 500
           PN  +   +++ +   G  A+A ++ + +
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMM 310



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%)

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           S Y     LD A+   + M+     P IV++  IL +  K       L +  K+   G P
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            NV + N + ++         A  +++++L  G +PD  ++ +LI  LC +G + EA+ L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              M    F+P V+ Y  +I G CKT   + +I +L +M +  C+P+   Y  LI  +  
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 487 GGWRAEAMELANALVS 502
              + +A  L + +++
Sbjct: 227 DRQQTQAFNLFSEMIT 242


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 235/459 (51%), Gaps = 20/459 (4%)

Query: 39  QFMKLIKRSFRAGKF-DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           QF KL+    +   + D  +   + M   G  PD      LI  FFQ ++ +    V+  
Sbjct: 123 QFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAK 182

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +  +  +N LI+G CK  +   A ++ D + +RG+ PDV TY  +I  LC  G 
Sbjct: 183 IIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE 242

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
             +A  +F ++    C+P V+TY+ +I +                  +CK   V +A   
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDS------------------LCKDRRVNEALDI 284

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              ++++G  P++ +YN L++ L N  +W E   ++ EM+S  + PN+VT+S+LI+  C+
Sbjct: 285 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 344

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G   +A  VL+   E G+ P+  +Y  L++ Y     +  A +  D MI+ GC PD+ +
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +CK     +A ++F ++   G  P++ SYNT+   L   G    A  +   ML
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G  PD  TY+ L+   C+ G + +A  L   M+ST  +P ++ YNI+I   CK+R + 
Sbjct: 465 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 524

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           E+ ++ + +F +G +PN   Y  +I G+   G   EA+E
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 226/443 (51%), Gaps = 25/443 (5%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L   +    F  LI    + GKF +++   + MVA G +PDV   T +I       K  +
Sbjct: 186 LGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC---KIGE 242

Query: 91  AVRVMEILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            V    +  K GE    PDV  Y+ +I   CK  ++  A  +   ++++G SP++ TYN 
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I  LC+      A  + ++++  N  P ++T+++LI                     CK
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI------------------FCK 344

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G V +A   ++++   G +P+V++Y+ L+       +  E  KL   MI++G +P+V +
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ILI+  C+  +  +A  +      +GLTPD  SY+ LI   C+ GRL  A +    M+
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           ++G LPD+  Y+ +L  FCK G   +A  +F  +      PN+  YN +  A+  S +  
Sbjct: 465 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 524

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  + SE+  +G++P+   Y ++I+ LC++G++DEA+    +ME     P   SYN+II
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVII 584

Query: 447 LGFCKTRRINESIEVLAAMFEKG 469
            GF + +  + +++++  M EKG
Sbjct: 585 RGFLQHKDESRAVQLIGEMREKG 607



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 207/410 (50%), Gaps = 19/410 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSR 154
            +L +   P +  +N L+S   K      A   L + +   G SPD  T +++I      
Sbjct: 111 HMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQL 170

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++  F V  ++++   + T++T+  LI                   G+CK G  GQA 
Sbjct: 171 QRVDLGFSVLAKIIKLGLQLTIVTFNTLIN------------------GLCKVGKFGQAV 212

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    + +RG QPDV +Y  ++  L  +G+      L  +M   G +P+VVTYS +I SL
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL 272

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+D +  +A+D+    K KG++P+ ++Y+ LI   C   R   A   L+ M+S   +P+I
Sbjct: 273 CKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNI 332

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V ++ ++  FCK GN  +A  + + ++++G  PNV +Y+++ +      + + A  +   
Sbjct: 333 VTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDV 392

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M++KG +PD  +YN LI+  C+   + EA  L  +M      P ++SYN +I G C+  R
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           + E+ ++   M   G  P+  TY +L++G    G+ A+A  L  A+ S +
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 18/358 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+PDVV  + +I    ++R+ N+A+ +   ++  G  P++F YN+LI G C  ++   A
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + +L+ + S    P++VT++++I   C  G +  A  V   +     +P V+TY+ L+  
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             L+ +  +A KL D M                 G CK   +G+A Q    +  +G  PD
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           ++SYN L+  L  +G+  E   L   M++ G  P++ TYSIL+   C+ G    A  + R
Sbjct: 437 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A +   L P+   Y+ LI A CK   L  A +    +   G  P++  Y TI+   CK G
Sbjct: 497 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG 556

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             D+ALE F  + + GCPPN  SYN +        D+ RA+ +I EM  KG   D  T
Sbjct: 557 LLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     R  ++D  L F + M  NG + D+   T +I  + +++K   A  V+    
Sbjct: 73  FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EPD   ++ L++GFC   ++  A  ++DR+      PD+VT + +I  LC +G + 
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++    +P  +TY  ++      G +  A+ L  +M                
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK G    A      +E +G + DV++Y+ L+  L N GKW++G K++ EMI R + 
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVT+S LI    ++GK  +A ++      +G+ PD  +Y+ LI  +CK+  L  A + 
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M+S GC PDIV Y+ ++ ++CK    D  + +F ++S  G  PN  +YNT+      
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG    A  +  EM+S+G+ P  +TY  L+  LC +G +++A+ +   M+ +R    +  
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           YNIII G C   +++++  +  ++ +KG KP+  TY ++I G+   G  +EA
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 231/470 (49%), Gaps = 18/470 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L ++     F  L+      G+  E++  ++ MV    +PD+V  + LI     + + ++
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ +++ + +YG +PD   Y  +++  CK+    LA  +  ++  R     VV Y+I+I 
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           SLC  G  + A  +F+++     K  V+TY+ LI     +G+ D   K+L EM       
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K+G + +A +    + +RG  PD I+YN L+          E  ++ 
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M+S+G EP++VTYSILI+S C+  + +D + + R    KGL P+  +Y+ L+  +C+ 
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+L+ A E    M+S G  P +V Y  +L   C NG  ++ALEIFEK+        +  Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N +   + ++     A  +   +  KG++PD +TYN +I  LC+ G + EA  L   M+ 
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
               P   +YNI+I        +  S+E++  M   G   + +T  ++I+
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 222/446 (49%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K ++++   ESM+ +   P  +   +L     + ++ +  +   + +E  G E D++   
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ +C+  ++  A  VL R    G+ PD +T++ ++   C  G +  A  + D+++  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P ++T + LI                   G+C KG V +A   +  +   G QPD +
Sbjct: 170 KQRPDLVTVSTLIN------------------GLCLKGRVSEALVLIDRMVEYGFQPDEV 211

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  +L  L   G       L  +M  R ++ +VV YSI+I SLC+DG  +DA+ +    
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           + KG+  D  +Y  LI   C DG+ D   + L  MI    +PD+V ++ ++  F K G  
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A E++ ++   G  P+  +YN++            A  M   M+SKG EPD +TY+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  C+   VD+ + L  ++ S    P  I+YN ++LGFC++ ++N + E+   M  +G 
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
            P+  TY +L++G+   G   +A+E+
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEI 477



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 19/378 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
            Q+  +I    + G FD++L     M   G K DVV  + LI     + K +   +++ E
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ +   PDV  ++ALI  F K  ++  A ++ + + +RG +PD +TYN +I   C    
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++FD ++   C+P ++TY+ILI +                   CK   V    + 
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINS------------------YCKAKRVDDGMRL 407

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            R + S+G  P+ I+YN L+      GK    ++L  EM+SRG+ P+VVTY IL+  LC 
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+   A+++    ++  +T     Y+ +I   C   ++D A      +   G  PD+V 
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   CK G+  +A  +F K+ + GC P+  +YN +  A       I ++ +I EM 
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587

Query: 397 SKGIEPDEITYNSLISCL 414
             G   D  T   +I  L
Sbjct: 588 VCGFSADSSTIKMVIDML 605



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR  +   K  +   L   MI     P  + ++ L S++ R  + +  +   + 
Sbjct: 36  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +  G+  D Y+   +I+ YC+  +L  A   L      G  PD + ++T++  FC  G 
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A+ + +++ ++   P++ + +T+ + L   G    AL +I  M+  G +PDE+TY  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ LC+ G    A+ L   ME    + +V+ Y+I+I   CK    ++++ +   M  KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 470 CKPNETTYVLLIEGI-GYGGW 489
            K +  TY  LI G+   G W
Sbjct: 276 IKADVVTYSSLIGGLCNDGKW 296



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 98/202 (48%)

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +T    SY   +     D +++ AI+  + MI    LP  +++N + +A  +    D  L
Sbjct: 31  ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
              + +   G   ++ +   M +        + A  ++      G EPD IT+++L++  
Sbjct: 91  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C +G V EAV L+  M   + RP +++ + +I G C   R++E++ ++  M E G +P+E
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY  ++  +   G  A A++L
Sbjct: 211 VTYGPVLNRLCKSGNSALALDL 232


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 230/453 (50%), Gaps = 18/453 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GKFD+   F+  M  NG   D+V    LI  + +E    +A  +M  +   G +P +F
Sbjct: 130 KDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLF 189

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNA+I+G CK  +   A  +L  + + G SPD  TYN ++   C R     A ++F ++
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           LR    P +++++ LI         D+A+    +M                 G C+ G +
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +GC  DVI+YN +L  L       + +KL  EM+ RG  P+  T++ L
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+DG    A+ +     ++ + PD  +Y+ LI  +CK G ++ A E  D MIS   
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ + Y  ++ A+C  G+  +A  +++ + + G  P + + NT+      SGD  +A  
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +  M++KG+ PD I+YN+LI+   R+  +D+A   +  ME     P +I+YN+++ GFC
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +  R+ E+  VL  M EKG  P+ +TY  LI G
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALING 582



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 222/464 (47%), Gaps = 19/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI+   +A K  E       + + G    +  C  L+    +      A  V  E++
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               E +V+  N +++  CK  + +     L  +   G   D+VTYN +IG+ C  G++E
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF++ + +     KP++ TY  +I                   G+CKKG   +A   + 
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIIN------------------GLCKKGRYARAKGILI 212

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + + G  PD  +YN LL        + E +++  EM+ +G+ P++V++S LI+   R+ 
Sbjct: 213 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR 272

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + A+   R  K+ GL PD   Y  L+  YC++G +  A++  D M+  GC+ D++ YN
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TIL   CK      A ++F+++ + G  P+  ++ T+       G+  +AL +   M  +
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I+PD + YN+LI   C+ G +++A  L   M S +  P  I+Y I+I  +C    ++E+
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +   M EKG KP   T   +I+G    G  ++A E    +++
Sbjct: 453 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 18/386 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  L+  S R   F E+      M+  G  PD+V  + LI  F + R  ++A+     
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++K+G  PD   Y  L+ G+C+   +  A K+ D +  +G   DV+ YN ++  LC   M
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  A K+FD+++     P   T+T LI     +G   KA+ L   M              
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G CK G + +A +    + SR   P+ I+Y +L+    ++G   E  +L   MI +G
Sbjct: 404 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 463

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++P +VT + +I   CR G +  A + L     KG+ PD  SY+ LI+ + ++  +D A 
Sbjct: 464 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            +++ M  +G LPDI+ YN ++  FC+ G   +A  +  K+ + G  P+ S+Y  + +  
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGH 583

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEI 405
            +  +   A     EML +G  PD++
Sbjct: 584 VTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 145/277 (52%)

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C  + + +++L+RT +   K  EG +    + S+G   ++   + L+  L +    E A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +V R     G+  + Y+ + +++A CKDG+ D    FL  M  +G   D+V YNT++ A+
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+ G  ++A EI   ++D G  P++ +YN + + L   G   RA G++ EML+ G+ PD 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TYN+L+   CR     EA  +  +M      P ++S++ +I  F + R +++++     
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M + G  P+   Y +L+ G    G   EA+++ + ++
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 236/469 (50%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     M+     P  V   +L+    + ++      +   ++ +G  P
Sbjct: 41  KSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPP 100

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+  N LI+ FC  N+   A  VL ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 101 DVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLF 160

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T+ A++LL  M                  +CK 
Sbjct: 161 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 220

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     +  +G  PD+ +Y  L+ +L N+ +W+    L+ +MI+  + P+VV +
Sbjct: 221 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 280

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A DV+     +G+ P+  +Y+ L+  +C    +D A++  D M+ 
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           +G  P++++YNT++  +CK    D+A  +FE++      PN  +YNT+   L   G    
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM++ G  PD  TY  L+  LC+   +DEA+ LL  +E +   P +  Y I+I 
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 460

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG +PN  TY ++I G+   G   EA +L
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 220/444 (49%), Gaps = 19/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+     GK  ++L+  + M+  G +P+VV    LI    +   +N A+R++  +E
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 199

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   +PDV  Y ++I   CK  Q+  A  +  ++  +G SPD+ TY  +I SLC+    +
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWK 259

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + +Q++     P V+ ++ ++ A                  +CK+G + +A   V 
Sbjct: 260 HVTTLLNQMINSKIMPDVVIFSTVVDA------------------LCKEGKITEAHDVVD 301

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V++YN L+       + +E  K+   M+  G  PNV++Y+ LI+  C+  
Sbjct: 302 MMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQ 361

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A  +     +K L P+  +Y+ L+   C  GRL  AI     M++ G +PD+  Y 
Sbjct: 362 RMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CK  + D+A+ + + +      P++  Y  +   +  +G+   A  + S + SK
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 481

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  TY  +I+ LCR G++DEA  L ++M+     P   +YN I  G  + +    +
Sbjct: 482 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 541

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I++L  M  +G   + +T  LL+E
Sbjct: 542 IQLLQEMLARGFSADVSTTTLLVE 565



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 194/424 (45%), Gaps = 23/424 (5%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            ++N   S     N ++ A    +R+      P  V +N ++ S+       + F + +Q
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P V T  ILI +                   C     G AF  +  +   G Q
Sbjct: 93  MDSFGIPPDVYTLNILINS------------------FCHLNRPGFAFSVLAKILKLGLQ 134

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  ++  L+R L   GK  +   L  +MI  G +PNVVTY  LI+ LC+ G T  A+ +
Sbjct: 135 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 194

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           LR+ ++    PD   Y  +I + CKD ++  A      M+  G  PDI  Y +++ + C 
Sbjct: 195 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                    +  ++ +    P+V  ++T+  AL   G    A  ++  M+ +G+EP+ +T
Sbjct: 255 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 314

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+L+   C    +DEAV +   M    + P VISYN +I G+CK +R++++  +   M 
Sbjct: 315 YNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 374

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
           +K   PN  TY  L+ G+ + G   +A+ L + +V+   I      R+     LLD   +
Sbjct: 375 QKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRI-----LLDYLCK 429

Query: 527 ISHL 530
            SHL
Sbjct: 430 KSHL 433



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +     ++ + G +P+V   T +I    +    ++A ++   ++  G  PD  
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  G  +  +   A ++L  + +RGFS DV T  +++  LC   + +S  ++  + 
Sbjct: 524 TYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 583

Query: 168 LR 169
           ++
Sbjct: 584 VQ 585


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 243/463 (52%), Gaps = 11/463 (2%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGKFD++   I  M+  G  PD    +K+I       K  KA  + E +++ G  P V+ 
Sbjct: 438 AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYT 497

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI  FCKA  I+ A K  D +  +G +P+VVTY  +I +      +  A ++F+ +L
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESRGCQ- 226
            + CKP V+TYT LI      GQ +KA ++   M G  +   + + F+    L+   C+ 
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK----LDHNNCEG 613

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+VI+Y  L+  L    + +E  +L+  M++ G EPN + Y  +I   C+ GK +DA +V
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                E+G +P+ Y+Y   I    KD RLDL ++ L  M+ + C P++V Y  ++   CK
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D+A ++  K+ + GC PNV +Y  M      SG   + L +  +M SKG  P+ IT
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y  LI+  C +G++DEA  LL +M+ T +   ++S+  II GF  ++    SI +L  + 
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELS 851

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--MHAIS 507
           E    P ++ Y +LI+     G    A++L   + S   HA+S
Sbjct: 852 ENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVS 894



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 233/554 (42%), Gaps = 91/554 (16%)

Query: 9   NPKSNERVRVSSSAETRPNTH-----LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           N  +++RV +    E + + H     LL+F         L+++  R G ++ +L  +  +
Sbjct: 152 NVNADDRVPLKFLMEIKDDDHELLRRLLNF---------LVRKCCRNGWWNMALEELGRL 202

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQI 122
              G KP       LI+ F +  K + A  V  E+L      D +  +      CK  + 
Sbjct: 203 KDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKC 262

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
             A  ++D   +  F PD V YN M+  LC   + E A  +  ++   +C P V+TY IL
Sbjct: 263 REAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRIL 320

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           +   + +GQ  +  ++L  M                   CK      A++  + +   GC
Sbjct: 321 LSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGC 380

Query: 226 QPDVISYNMLL-----------------------------------------RTLLNMGK 244
           QP  + YN+ +                                         R L   GK
Sbjct: 381 QPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGK 440

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           +++  K++ EM+ +G  P+  TYS +I  LC   K E A  +    K  G+ P  Y+Y  
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI ++CK G +  A ++ D M+  GC P++V Y  ++ A+ K      A E+FE +   G
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEM--------LSKGIE--------PDEITYN 408
           C PNV +Y  +      +G   +A  + + M        + K  +        P+ ITY 
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +L+  LC+   V EA  LL  M +    P  I Y+ +I GFCK  ++ ++ EV   M E+
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680

Query: 469 GCKPNETTYVLLIE 482
           G  PN  TY   I+
Sbjct: 681 GYSPNLYTYSSFID 694



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 189/426 (44%), Gaps = 27/426 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L++K  +    N A+  +  L+ +G +P    YNALI  F +A++++ A  V   + S  
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F  D  T +    SLC  G    AF + D+   ++  P  + Y  ++             
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVS------------ 287

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+  +  +A   +  + S  C P+V++Y +LL   L  G+    +++++ MI
Sbjct: 288 ------GLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR-- 314
           + G  PN   ++ LI + C+      A  + +   + G  P    Y+  I + C +    
Sbjct: 342 TEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQP 401

Query: 315 ----LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
               LDL  +    M+  G + + VN +      C  G  DQA +I  ++   G  P+ S
Sbjct: 402 SSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS 461

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+ +   L  +    +A  +  EM   GI P   TY  LI   C+ G++ +A     +M
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P V++Y  +I  + K +++  + E+   M  +GCKPN  TY  LI+G    G  
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQI 581

Query: 491 AEAMEL 496
            +A ++
Sbjct: 582 EKACQI 587



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 65/400 (16%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N ++   C  G    A +   +L     KP+  TY  LIQ  +   + DK    LD   +
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFL---RADK----LDTAYL 232

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K+ M+  AF             D  + +    +L   GK  E   L+ E  +    P+ 
Sbjct: 233 VKREMLSYAFVM-----------DRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDT 279

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y+ ++S LC     E+A+D+L   +     P+  +Y  L+S   + G+L      L  
Sbjct: 280 VFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSM 339

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI++GC P+   +N+++ A+CK+ +   A ++F+K+   GC P    YN    ++ S+ +
Sbjct: 340 MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEE 399

Query: 385 KIRA--LGMI----SEMLSKGIEPDEITYNSLISCLCRDGMVDEA--------------- 423
           +  +  L ++    SEML  G+  +++  ++   CLC  G  D+A               
Sbjct: 400 QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPD 459

Query: 424 -------VGLLVD-------------MESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
                  +G L D             M+     P+V +Y I+I  FCK   I ++ +   
Sbjct: 460 DSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFD 519

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            M  KGC PN  TY  LI    +   +A+ M +A+ L  M
Sbjct: 520 EMLHKGCTPNVVTYTALI----HAYLKAKQMPVADELFEM 555



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 58/358 (16%)

Query: 66  NGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIE 123
           N C+ P+V+    L+    +  +  +A  +++ +  +G EP+   Y+A+I GFCK  +++
Sbjct: 609 NNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQ 668

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A +V  ++  RG+SP++ TY+  I  L     ++   KV  ++L ++C P V+ YT ++
Sbjct: 669 DAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMV 728

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
                 G+TD+A KL+ +M                 G  K G + Q  +  R + S+GC 
Sbjct: 729 DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCA 788

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEM--------------ISRGLEPNVVT------ 266
           P+ I+Y +L+    + G  +E  KL+ EM              I  G     +T      
Sbjct: 789 PNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLD 848

Query: 267 -------------YSILISSLCRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCK 311
                        Y ILI +  + G+ E A+D+L   ++       + Y Y  LI     
Sbjct: 849 ELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSH 908

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
             ++D A+E    MIS   +P++     ++    K     +AL+    LSD  C  ++
Sbjct: 909 ASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQ----LSDSICQMDI 962



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 29/282 (10%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           F+  + D  L  +  M+ N C P+VV+ T+++    +  K+++A ++M  +E+ G  P+V
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             Y A+I GF K+ +IE   ++   + S+G +P+ +TY ++I   CS G+++ A+K+ D+
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDK---AMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           +     K T     IL    ++EG + +   ++ LLDE+                  E+ 
Sbjct: 817 M-----KQTYWPKHILSHRKIIEGFSQEFITSIGLLDELS-----------------ENE 854

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP--NVVTYSILISSLCRDGKTE 281
               D + Y +L+   +  G+ E    L+ E+ S       N   Y+ LI +L    K +
Sbjct: 855 SVPVDSL-YRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVD 913

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            A+++  +   K + P+      LI    K  +   A++  D
Sbjct: 914 KALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSD 955


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 258/515 (50%), Gaps = 53/515 (10%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +F      + ++++    + K D+++     MV +   P +    KL+    + +K +  
Sbjct: 45  AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + + E +++ G   +++ YN LI+ FC+ +QI LA  +L ++   G+ P +VT + ++  
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
            C    I  A  + DQ++    +P  IT+T LI    L  +  +A+ L+D M        
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224

Query: 203 ---------GMCKKGMVGQAFQFVRSLES------------------------------- 222
                    G+CK+G +  AF  +  +E+                               
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284

Query: 223 ----RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G +P+VI+Y+ L+  L N  +W +  +L+++MI R + PNVVT++ LI +  ++G
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  +A  +     ++ + PD ++Y  LI+ +C   RLD A    + MIS  C P++V YN
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FCK    D+ +E+F ++S  G   N  +Y T+    + + D   A  +  +M+S 
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+ +TYN+L+  LC++G +++A+ +   ++ ++  PT+ +YNI+I G CK  ++ + 
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            ++  ++  KG KP+   Y  +I G    G + EA
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 18/369 (4%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            R FS     Y  ++ +      ++ A  +F  +++    P++  +  L+ A     + D
Sbjct: 43  GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
             + L ++M                  +  G   ++ +YN+L+       +      L+ 
Sbjct: 103 LVISLGEKM------------------QRLGISHNLYTYNILINCFCRRSQISLALALLG 144

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M+  G EP++VT S L++  C   +  DAV ++    E G  PD  ++  LI       
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +   A+  +D M+  GC P++V Y  ++   CK G+ D A  +  K+       NV  Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+  +L     +  AL + +EM +KG+ P+ ITY+SLISCLC      +A  LL DM   
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +  P V+++N +I  F K  ++ E+ ++   M ++   P+  TY  LI G        EA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384

Query: 494 MELANALVS 502
             +   ++S
Sbjct: 385 KHMFELMIS 393



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 57/116 (49%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G+   M+     P    +N L+S + +    D  + L   M+       + +YNI+I 
Sbjct: 69  AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  +I+ ++ +L  M + G +P+  T   L+ G  +G   ++A+ L + +V M
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 241/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     M+     P +   TKL+    + +  +  + +   ++ +G  P
Sbjct: 33  KSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPP 92

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +++  N LI+ FC   ++  A  VL ++   G  P++ T+N +I  LC  G I     +F
Sbjct: 93  NIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLF 152

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 153 DKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 212

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V QAF     +  +G  P + +YN L+  L N+ +W+    L+ EM++  + PNVV +
Sbjct: 213 RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF 272

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A DV+    ++G+ P+  +Y+ L+  +C    +D A++  D M+ 
Sbjct: 273 STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 332

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD+V+Y+T++  +CK    ++A+ +FE++      PN  +Y+T+   L   G    
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD ++Y  L+  LC++  +DEA+ LL  +E +   P +  Y I+I 
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 452

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG  PN  TY ++I G+   G  AEA +L
Sbjct: 453 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 218/444 (49%), Gaps = 19/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+     GK  E L+  + M+  G +P+VV    LI    +   ++ A+R++  +E
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   +PDV  Y ++I   CK  Q+  A  +   +  +G SP + TYN +I +LC+    +
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + ++++     P V+ ++ ++ A                  +CK+G V +A   V 
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDA------------------LCKEGKVMEAHDVVD 293

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V++YN L+       + +E  K+   M+ +G  P+VV+YS LI+  C+  
Sbjct: 294 MMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ 353

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E A+ +      K L P+  +Y  L+   C  GRL  AI     M++ G +PD V+Y 
Sbjct: 354 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 413

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CKN   D+A+ + + +      P++  Y  +   +  +G+   A  + S + SK
Sbjct: 414 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 473

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  TY  +I+ LC+ G++ EA  L  +M+   + P   +YN+I  GF +       
Sbjct: 474 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 533

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I++L  M  +G   + +T  +L+E
Sbjct: 534 IQLLQEMLARGFSADVSTSTVLVE 557



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 201/410 (49%), Gaps = 19/410 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    + G    ++  + SM    C+PDVV+ T +I    ++R+  +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ +   P +F YN+LI   C   + +    +L+ + +    P+VV ++ ++ +L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  A  V D +++   +P V+TY  L+    L  + D+A+K+ D M         
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK   + +A      +  +   P+ ++Y+ L+  L ++G+ ++   L  E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG  P+ V+Y IL+  LC++ + ++A+ +L+A +   + PD   Y  +I   C+ G 
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A +    + S G  P++  Y  ++   C+ G   +A ++F ++   G  PN  +YN 
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +      + + +R + ++ EML++G   D  T   L+  L  DG+ D++V
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL-DQSV 568



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 18/395 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           ++N   S     N ++ A    +R+      P +  +  ++ S+       +   +  Q+
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P + T  ILI +                   C    +G AF  +  +   G QP
Sbjct: 86  DSFGIPPNIYTLNILINS------------------FCHLQRLGFAFSVLAKILKLGHQP 127

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++ ++N L+R L   GK  E   L  +MI  G +PNVVTY  LI+ LC+ G T  A+ +L
Sbjct: 128 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R+ ++    PD   Y  +I + CKD ++  A      MI  G  P I  YN+++ A C  
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                   +  ++ +    PNV  ++T+  AL   G  + A  ++  M+ +G+EP+ +TY
Sbjct: 248 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 307

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+   C    +DEAV +   M    F P V+SY+ +I G+CK +RI +++ +   M  
Sbjct: 308 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 367

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K   PN  TY  L+ G+ + G   +A+ L + +V+
Sbjct: 368 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)

Query: 366 PPNV--SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           PP+   SS+NT  S   +      AL   + ML     P    +  L+  + +       
Sbjct: 19  PPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV 78

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + L   M+S    P + + NI+I  FC  +R+  +  VLA + + G +PN  T+  LI G
Sbjct: 79  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 138

Query: 484 IGYGGWRAEAMELANALV 501
           +   G   E + L + ++
Sbjct: 139 LCVEGKIGEVLHLFDKMI 156



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +     ++ + G  P+V   T +I    Q+    +A ++   +++ G  P+  
Sbjct: 456 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 515

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  GF + N+     ++L  + +RGFS DV T  +++  L   G+ +S  ++  + 
Sbjct: 516 TYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 575

Query: 168 LR 169
           L+
Sbjct: 576 LQ 577


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 241/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     M+     P +   TKL+    + +  +  + +   ++ +G  P
Sbjct: 42  KSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPP 101

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +++  N LI+ FC   ++  A  VL ++   G  P++ T+N +I  LC  G I     +F
Sbjct: 102 NIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLF 161

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 162 DKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 221

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V QAF     +  +G  P + +YN L+  L N+ +W+    L+ EM++  + PNVV +
Sbjct: 222 RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF 281

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A DV+    ++G+ P+  +Y+ L+  +C    +D A++  D M+ 
Sbjct: 282 STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 341

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD+V+Y+T++  +CK    ++A+ +FE++      PN  +Y+T+   L   G    
Sbjct: 342 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 401

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD ++Y  L+  LC++  +DEA+ LL  +E +   P +  Y I+I 
Sbjct: 402 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 461

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG  PN  TY ++I G+   G  AEA +L
Sbjct: 462 GMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 218/444 (49%), Gaps = 19/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+     GK  E L+  + M+  G +P+VV    LI    +   ++ A+R++  +E
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   +PDV  Y ++I   CK  Q+  A  +   +  +G SP + TYN +I +LC+    +
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + ++++     P V+ ++ ++ A                  +CK+G V +A   V 
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDA------------------LCKEGKVMEAHDVVD 302

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V++YN L+       + +E  K+   M+ +G  P+VV+YS LI+  C+  
Sbjct: 303 MMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ 362

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E A+ +      K L P+  +Y  L+   C  GRL  AI     M++ G +PD V+Y 
Sbjct: 363 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 422

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CKN   D+A+ + + +      P++  Y  +   +  +G+   A  + S + SK
Sbjct: 423 ILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSK 482

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  TY  +I+ LC+ G++ EA  L  +M+   + P   +YN+I  GF +       
Sbjct: 483 GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRG 542

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I++L  M  +G   + +T  +L+E
Sbjct: 543 IQLLQEMLARGFSADVSTSTVLVE 566



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 201/410 (49%), Gaps = 19/410 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    + G    ++  + SM    C+PDVV+ T +I    ++R+  +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ +   P +F YN+LI   C   + +    +L+ + +    P+VV ++ ++ +L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  A  V D +++   +P V+TY  L+    L  + D+A+K+ D M         
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK   + +A      +  +   P+ ++Y+ L+  L ++G+ ++   L  E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG  P+ V+Y IL+  LC++ + ++A+ +L+A +   + PD   Y  +I   C+ G 
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A +    + S G  P++  Y  ++   C+ G   +A ++F ++   G  PN  +YN 
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +      + + +R + ++ EML++G   D  T   L+  L  DG+ D++V
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL-DQSV 577



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 18/395 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           ++N   S     N ++ A    +R+      P +  +  ++ S+       +   +  Q+
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P + T  ILI +                   C    +G AF  +  +   G QP
Sbjct: 95  DSFGIPPNIYTLNILINS------------------FCHLQRLGFAFSVLAKILKLGHQP 136

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++ ++N L+R L   GK  E   L  +MI  G +PNVVTY  LI+ LC+ G T  A+ +L
Sbjct: 137 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R+ ++    PD   Y  +I + CKD ++  A      MI  G  P I  YN+++ A C  
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                   +  ++ +    PNV  ++T+  AL   G  + A  ++  M+ +G+EP+ +TY
Sbjct: 257 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 316

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+   C    +DEAV +   M    F P V+SY+ +I G+CK +RI +++ +   M  
Sbjct: 317 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 376

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K   PN  TY  L+ G+ + G   +A+ L + +V+
Sbjct: 377 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 165/339 (48%), Gaps = 19/339 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +  MV +   P+VV+ + ++    +E K  +A  V++++ K G EP+V  YNAL+ G C
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 324

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
             ++++ A KV D +  +GF+PDVV+Y+ +I   C    IE A  +F+++ R    P  +
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY+ L+                   G+C  G +  A      + +RG  PD +SY +LL 
Sbjct: 385 TYSTLMH------------------GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 426

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L    + +E   L+  +    ++P++  Y+I+I  +CR G+ E A D+      KGL P
Sbjct: 427 YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHP 486

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           + ++Y  +I+  C+ G L  A +    M   G  P+   YN I   F +N    + +++ 
Sbjct: 487 NVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 546

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +++   G   +VS+   +   L   G       ++SE L
Sbjct: 547 QEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)

Query: 366 PPNV--SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           PP+   SS+NT  S   +      AL   + ML     P    +  L+  + +       
Sbjct: 28  PPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV 87

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + L   M+S    P + + NI+I  FC  +R+  +  VLA + + G +PN  T+  LI G
Sbjct: 88  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 147

Query: 484 IGYGGWRAEAMELANALV 501
           +   G   E + L + ++
Sbjct: 148 LCVEGKIGEVLHLFDKMI 165



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +     ++ + G  P+V   T +I    Q+    +A ++   +++ G  P+  
Sbjct: 465 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 524

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  GF + N+     ++L  + +RGFS DV T  +++  L   G+ +S  ++  + 
Sbjct: 525 TYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 584

Query: 168 LR 169
           L+
Sbjct: 585 LQ 586


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 237/447 (53%), Gaps = 23/447 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   +  M  +GC P+ V+   LI    +  + N+A++++E +   G  PDV  +N +
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G C+ N+I    K++DR+  RGF+P+ +TY +++  LC  G ++ A      LL    
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVP 340

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLL-DEM-----------------GMCKKGMVGQAF 214
            P  + +TILI   +  G+ D+A   L D+M                 G+CKKG++G A 
Sbjct: 341 TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAV 400

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             V  + + GC P++I+Y  LL       + EE   ++ EM ++G E N++ Y++L+ +L
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRAL 460

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++GK   A+D+L    +KG  PD ++++ LI   CK  R + A+     M+ DG + + 
Sbjct: 461 CKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANT 520

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YNT++ AF + G   +AL++   +   GCP +  +YN +  A    G   +ALG+  E
Sbjct: 521 VTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDE 580

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ K + P  I+ N LI+ LCR G V  A+ LL DM      P V++YN +I G CK   
Sbjct: 581 MVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGN 640

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLI 481
           I E+  +   +  +G +P+  TY  LI
Sbjct: 641 IREAFNLFNKLQAEGIQPDAITYNTLI 667



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 210/454 (46%), Gaps = 49/454 (10%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+L K   P V+ +  ++   C  N+++ A  +L  +   G  P+ V Y  +I +L  R 
Sbjct: 198 EMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRD 257

Query: 156 MIESAFKVFDQLLRDNCKPTV-----------------------------------ITYT 180
            +  A K+ +++    C P V                                   ITY 
Sbjct: 258 RVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG 317

Query: 181 ILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQFVR-SLESRGCQ 226
           +L+      G+ D+A  LL+++             G  K G + +A  F+   +   GC+
Sbjct: 318 VLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDV ++N L+  L   G       ++ +M + G  PN++TY+ L+   C+  + E+A  V
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L     KG   +   Y+ L+ A CK+G++  A++ L  M   GC PDI  +NT++   CK
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               + AL ++  +   G   N  +YNT+  A    G    AL ++++ML +G   DEIT
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT 557

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI   C+ G  ++A+GL  +M      P+ IS N++I G C+  ++  ++E+L  M 
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +G  P+  TY  LI G+   G   EA  L N L
Sbjct: 618 HRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 207/431 (48%), Gaps = 50/431 (11%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP   +YN ++     AN   +A  V   + S+G  P V T+ +++ +LC    +++A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +   + +  C P  + Y  LI A     + ++A+KLL+EM +                  
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFL------------------ 271

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC PDV ++N ++  L  + +  EG KL+  M+ RG  PN +TY +L++ LCR GK ++
Sbjct: 272 MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDE 331

Query: 283 AVDVLRAAK--------------------------------EKGLTPDAYSYDPLISAYC 310
           A  +L                                    + G  PD ++++ LI   C
Sbjct: 332 AQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K G +  A++ ++ M ++GC P+++ Y T+L  FCK    ++A  +  ++S  G   N+ 
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIM 451

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            YN +  AL  +G   +AL M+ EM  KG +PD  T+N+LI  LC+    ++A+ L  DM
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                    ++YN +I  F +   I E+++++  M  +GC  +E TY  LI+     G  
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGAT 571

Query: 491 AEAMELANALV 501
            +A+ L + +V
Sbjct: 572 EKALGLFDEMV 582



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 18/282 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +  + +E+ Y +  M A G + +++    L++   +  K  KA+ ++ E+ +K  +PD+F
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI G CK ++ E A  +   +   G   + VTYN +I +    G I+ A K+ + +
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C    ITY  LI+A    G T+KA+ L DEM                 G+C+ G V
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +R +  RG  PDV++YN L+  L  MG   E   L  ++ + G++P+ +TY+ L
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           I   CR G  +DA  +L    E    P+  ++  L+S + K+
Sbjct: 667 ICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 10/282 (3%)

Query: 206 KKGMVGQAFQFVRSLESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           +  + GQA + +  L+ +G   C+P   SYN++L  L++         +  EM+S+G+ P
Sbjct: 149 RANLPGQATRML--LDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIP 206

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            V T+ +++ +LC   + ++A  +LR   + G  P++  Y  LI A  K  R++ A++ L
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   GCLPD+  +N ++   C+     +  ++ +++   G  PN  +Y  + + L   
Sbjct: 267 EEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD-MESTRFRPTVIS 441
           G    A      +L+K   P+++ +  LI+   + G +DEA   L D M     RP V +
Sbjct: 327 GKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFT 382

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +N +I G CK   +  +++++  M   GC PN  TY  L++G
Sbjct: 383 FNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDG 424



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%)

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C P   +YN +L           A  +F ++   G  P V ++  +  AL    +   A 
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M   G  P+ + Y +LI  L +   V+EA+ LL +M      P V ++N +I G 
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           C+  RI+E  +++  M  +G  PN+ TY +L+ G+   G   EA  L N
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN 337



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 8/124 (6%)

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           EP   +YN ++  L        A  +  +M S    PTV ++ +++   C    ++ +  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR-DTFK------- 512
           +L  M + GC PN   Y  LI  +       EA++L   +  M  +   DTF        
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 513 RLNR 516
           RLNR
Sbjct: 290 RLNR 293


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 272/513 (53%), Gaps = 31/513 (6%)

Query: 30  LLSFDVKETQF-MKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +LS  +  T F   ++ ++F A  + D +L  +  M  +GC P+ V+   LI    +  +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            N+A++++E +   G  PD   +N +I G CK ++I  A K+++R+  RGF+PD +TY  
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           ++  LC  G +++A  +F ++     KP ++ +  LI   +  G+ D A  +L +M    
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G  K+G+VG A + +  + ++GC+P+V SY +L+     +GK +E 
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             ++ EM + GL+PN V ++ LIS+ C++ +  +AV++ R    KG  PD Y+++ LIS 
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C+   +  A+  L  MIS+G + + V YNT++ AF + G   +A ++  ++   G P +
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +YN++   L  +G+  +A  +  +ML  G  P  I+ N LI+ LCR GMV+EAV    
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M      P ++++N +I G C+  RI + + +   +  +G  P+  T+  L+  +  GG
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683

Query: 489 WRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
           +  +A  L +  +       D F   +RT+ +L
Sbjct: 684 FVYDACLLLDEGI------EDGFVPNHRTWSIL 710



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 218/424 (51%), Gaps = 22/424 (5%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++L +   P +F +  ++  FC  N+I+ A  +L  +   G  P+ V Y  +I SL    
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A ++ +++    C P   T+  +I       + ++A K+++ M             
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-S 257
               G+CK G V  A    + L  R  +P+++ +N L+   +  G+ ++ + ++++M+ S
Sbjct: 327 YLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G+ P+V TY+ LI    ++G    A++VL   + KG  P+ YSY  L+  +CK G++D 
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   L+ M +DG  P+ V +N +++AFCK     +A+EIF ++   GC P+V ++N++ S
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L    +   AL ++ +M+S+G+  + +TYN+LI+   R G + EA  L+ +M       
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             I+YN +I G C+   ++++  +   M   G  P+  +  +LI G+   G   EA+E  
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622

Query: 498 NALV 501
             +V
Sbjct: 623 KEMV 626



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 20/384 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI      G+ D++   +  MV + G  PDV     LI  +++E     A+ V+  +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
              G +P+V++Y  L+ GFCK  +I+ A  VL+ + + G  P+ V +N +I + C    I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++F ++ R  CKP V T+  LI                   G+C+   +  A   +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLIS------------------GLCEVDEIKHALWLL 517

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R + S G   + ++YN L+   L  G+ +E  KL+ EM+ +G   + +TY+ LI  LCR 
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ + A  +       G  P   S + LI+  C+ G ++ A+EF   M+  G  PDIV +
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++   C+ G  +  L +F KL   G PP+  ++NT+ S L   G    A  ++ E + 
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697

Query: 398 KGIEPDEITYNSLISCLCRDGMVD 421
            G  P+  T++ L+  +     +D
Sbjct: 698 DGFVPNHRTWSILLQSIIPQETLD 721



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 162/331 (48%), Gaps = 18/331 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   ++ G    +L  +  M   GCKP+V   T L+  F +  K ++A  V+  + 
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+   +N LIS FCK ++I  A ++   +  +G  PDV T+N +I  LC    I+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   ++ +      +TY  LI A +  G+  +A KL++EM                
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C+ G V +A      +   G  P  IS N+L+  L   G  EE  +   EM+ RG  
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P++VT++ LI+ LCR G+ ED + + R  + +G+ PD  +++ L+S  CK G +  A   
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           LD  I DG +P+   ++ +L +       D+
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 59/398 (14%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+      Y ++IG L + G     FK  D+LL       ++    L  + M +   DKA
Sbjct: 106 GYRHSFDVYQVLIGKLGANG----EFKTIDRLLIQMKDEGIVFKESLFISIMRD--YDKA 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                       G  GQ  + +  + +   C+P   SYN++L  L++    +    +  +
Sbjct: 160 ------------GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+SR + P + T+ +++ + C   + + A+ +LR   + G  P++  Y  LI +  K  R
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267

Query: 315 LDLAIEFLDYMISDGCLPDI-----------------------------------VNYNT 339
           ++ A++ L+ M   GC+PD                                    + Y  
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SK 398
           ++   CK G  D A ++F ++      P +  +NT+     + G    A  ++S+M+ S 
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI PD  TYNSLI    ++G+V  A+ +L DM +   +P V SY I++ GFCK  +I+E+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             VL  M   G KPN   +  LI          EA+E+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 235/466 (50%), Gaps = 14/466 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RA    ++L     M+ +   P         +   +  ++  A+ ++  + ++G  PD  
Sbjct: 154 RADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAV 213

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  +I        +  A  +LD +   G + DV T+N ++  LC  G +  A ++ D++
Sbjct: 214 LYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRM 273

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAF 214
           +   C P+V+TY  L+Q      Q D+A  +L  +             G   +G + +A 
Sbjct: 274 MTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARAT 333

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    + S+GC PDV +Y++L+  L  +G++    +++ EM  +G  PN+VTYS L+ S 
Sbjct: 334 ELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 393

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CR+G  +DA  +L     KG + ++  Y+ +I A CKDG+LD A   +  M S GC PDI
Sbjct: 394 CRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI 453

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YNT++   C N   ++A  IF  L + G   N  +YNT+  AL  +G     L + SE
Sbjct: 454 CTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASE 513

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           ML  G + D I+YN LI  LC++G VD ++ LL +M +   +P   SYN++I   CK  +
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +++E+   M  +G  P+  TY  LI G+   GW   A+ L   L
Sbjct: 574 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 232/432 (53%), Gaps = 21/432 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G+  E+   ++ M+  GC P VV    L++   + R++++A     +L +  E +V   N
Sbjct: 261 GRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC---AMLGRLPEVNVVMLN 317

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I G     ++  A ++ + + S+G  PDV TY+I++  LC  G   SA ++ D++   
Sbjct: 318 TVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEK 377

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
            C P ++TY+ L+ +    G  D A  +LD+M       + + F    S+ S+G      
Sbjct: 378 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM-------LAKGF----SMNSQG------ 420

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            YN ++  L   GK ++  +L+ EM S+G +P++ TY+ +I  LC +   E+A  + R  
Sbjct: 421 -YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E+G+  +  +Y+ LI A  ++GR    +     M+  GC  D+++YN ++ A CK GN 
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+++ + E++   G  PN  SYN + + L  +G    AL +  EML++G+ PD +TYN+L
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 599

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+ LC+ G    A+ LL  + +    P +++YNI+I   CK R ++++  +L      G 
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 471 KPNETTYVLLIE 482
            PNE T+ ++++
Sbjct: 660 VPNERTWGMMVQ 671



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 200/388 (51%), Gaps = 27/388 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           +V       +I+     GK   +    E M + GC PDV   + L+    +  +   AVR
Sbjct: 310 EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR 369

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +++ +E+ G  P++  Y+ L+  FC+    + A  +LD++ ++GFS +   YN +I +LC
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
             G ++ A ++  ++    CKP + TY  +I                    +C   ++ +
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH------------------LCNNDLMEE 471

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R+L   G   + I+YN L+  LL  G+W+EG +L +EM+  G + +V++Y+ LI 
Sbjct: 472 AEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIK 531

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +LC++G  + ++ +L     KG+ P+ +SY+ LI+  CK G++  A+E    M++ G  P
Sbjct: 532 ALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 591

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG-- 390
           DIV YNT++   CK G    AL + EKL +    P++ +YN + S  W    K+R L   
Sbjct: 592 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS--WHC--KVRLLDDA 647

Query: 391 --MISEMLSKGIEPDEITYNSLISCLCR 416
             ++ + +S GI P+E T+  ++    R
Sbjct: 648 AMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 52/316 (16%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  +I    + GK D++   ++ M + GCKPD+  CT               
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI--CT--------------- 455

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
                            YN +I   C  + +E A  +   L   G   + +TYN +I +L
Sbjct: 456 -----------------YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G  +   ++  ++L   C+  VI+Y  LI+A   EG  D++M LL+EM         
Sbjct: 499 LRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM--------- 549

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                     ++G +P+  SYNML+  L   GK  +  +L  EM+++GL P++VTY+ LI
Sbjct: 550 ---------VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC+ G T  A+++L     + + PD  +Y+ LIS +CK   LD A   LD  IS G +
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660

Query: 332 PDIVNYNTILAAFCKN 347
           P+   +  ++  F + 
Sbjct: 661 PNERTWGMMVQNFVRQ 676



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 157/390 (40%), Gaps = 81/390 (20%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV--------------GQAFQFVR 218
            P +   ++ ++  +     D+A+ LLD +   +   +              G+A   + 
Sbjct: 71  HPALSLSSLPLRPILAAADPDRALALLDSLPASRLPPLRESLLLPLLRSLPPGRALHLLD 130

Query: 219 SLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            +  R    P   SYN++L TL       +   L   M+   + P   T+ +   +LCR 
Sbjct: 131 QMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 190

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISA----------------------------- 308
           G+  DA+ +LR     G  PDA  Y  +I A                             
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTF 250

Query: 309 ------YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ---------- 352
                  C  GR+  A   +D M++ GC+P +V Y  +L   C+   AD+          
Sbjct: 251 NDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE 310

Query: 353 ---------------------ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                                A E++E +   GCPP+V +Y+ +   L   G    A+ M
Sbjct: 311 VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  KG  P+ +TY++L+   CR+GM D+A  +L  M +  F      YN II   CK
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLI 481
             +++++  ++  M  +GCKP+  TY  +I
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMI 460



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 32/285 (11%)

Query: 250 KLMTEMISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            L+ +M  R  + P+  +Y++++S+L R     DA+ + R      + P  +++     A
Sbjct: 127 HLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARA 186

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C+ GR   A+  L  M   GC+PD V Y T++ A    G   +A  + +++  +GC  +
Sbjct: 187 LCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAAD 246

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL- 427
           V+++N +   L   G    A  ++  M+++G  P  +TY  L+  LCR    DEA  +L 
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLG 306

Query: 428 ------VDMESTRFR------------------------PTVISYNIIILGFCKTRRINE 457
                 V M +T  R                        P V +Y+I++ G CK  R   
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++ +L  M EKGC PN  TY  L+      G   +A  + + +++
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLA 411



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 1/168 (0%)

Query: 318 AIEFLDYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           A+  LD M     + P   +YN +L+   +      AL ++ ++     PP   ++    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL   G    AL ++  M   G  PD + Y ++I  L   G V EA  LL +M      
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             V ++N ++LG C   R+ E+  ++  M  +GC P+  TY  L++G+
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGL 292



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 387 RALGMISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           RAL ++ +M  +  + P   +YN ++S L R     +A+ L   M   R  PT  ++ + 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH- 504
               C+  R  +++ +L  M   GC P+   Y  +I  +   G  AEA  L + ++ M  
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 505 AISRDTFKRL 514
           A   +TF  L
Sbjct: 244 AADVNTFNDL 253


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 245/498 (49%), Gaps = 29/498 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    +   +   L     M + G  PDV     LI  F   R+   A  V+  L 
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +N LI G C   +I  A  + D+    GF PDVVTY  ++  LC  G   
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++   +++ NC+P VI Y  +I +                  +CK   V +AF    
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDS------------------LCKDRQVTEAFNLFS 314

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + ++G  PD+ +YN L+  L N+ +W+    L+ EM++  + PNVV +S ++ +LC++G
Sbjct: 315 EMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 374

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A DV+    ++G+ PD  +Y  L+  +C    +D A++  D M+  GC+P++ +YN
Sbjct: 375 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 434

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +C+    D+A+ + E++S  G   +  +YNT+   L   G    A+ +  EM++ 
Sbjct: 435 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 494

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY  L+  LC++  + EA+ LL  +E +     ++ YNI I G C+   +  +
Sbjct: 495 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 554

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD--------- 509
            ++ + +  KG +P+  TY ++I G+   G   EA +L   +   +  SRD         
Sbjct: 555 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM-DENGCSRDGCIYNTIIR 613

Query: 510 TFKRLNRTFPLLDVYKEI 527
            F R N TF    + +E+
Sbjct: 614 GFLRSNETFGATQLLQEM 631



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 221/446 (49%), Gaps = 19/446 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME- 96
           T F  LI+     GK  E+L+  +  +  G +PDVV    L+    +   ++ A+R++  
Sbjct: 221 TTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS 280

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +++K   P+V AYN +I   CK  Q+  A  +   + ++G SPD+ TYN +I +LC+   
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +    + ++++     P V+ ++ ++ A                  +CK+GM+  A   
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDA------------------LCKEGMIAIAHDV 382

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  RG +PDV++Y  L+       + +E  K+   M+ +G  PNV +Y+ILI+  C+
Sbjct: 383 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 442

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + + A+ +L     +GL  D  +Y+ LI   C  GRL  AI     M++ G +PD+V 
Sbjct: 443 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  +L   CKN +  +A+ + + +       ++  YN     +  +G+   A  + S + 
Sbjct: 503 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 562

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           SKG++PD  TYN +I  LC+ G++DEA  L   M+          YN II GF ++    
Sbjct: 563 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETF 622

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
            + ++L  M  +G   + +T  L++E
Sbjct: 623 GATQLLQEMLAEGFSADVSTTTLIVE 648



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 193/389 (49%), Gaps = 18/389 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    ++  + SMV   C+P+V+    +I    ++R+  +A  +  E++ K   PD+F
Sbjct: 267 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI   C   + +    +L+ + +    P+VV ++ ++ +LC  GMI  A  V D +
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           ++   +P V+TYT L+    L  + D+A+K+ D M                 G C+   +
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +G   D ++YN L+  L ++G+ +    L  EM++ G  P++VTY IL
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC++    +A+ +L+A +   L  D   Y+  I   C+ G L+ A +    + S G 
Sbjct: 507 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 566

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+  YN ++   CK G  D+A ++F K+ + GC  +   YNT+      S +   A  
Sbjct: 567 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQ 626

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGM 419
           ++ EML++G   D  T   ++  L  DG+
Sbjct: 627 LLQEMLAEGFSADVSTTTLIVEMLSDDGL 655



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 140/276 (50%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P  + +  LL ++  M  +     L T+M S G+ P+V T +ILI+S C   +   A  V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    + G  PD  +++ LI   C +G++  A+   D  I +G  PD+V Y T++   CK
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN   A+ +   +    C PNV +YNT+  +L        A  + SEM++KGI PD  T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YNSLI  LC          LL +M +++  P V+ ++ ++   CK   I  + +V+  M 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++G +P+  TY  L++G        EA+++ + +V 
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 1/197 (0%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A+   + M+     P  V++  +L +  K  +    L +  ++   G PP+V + N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + ++         A  +++++L  G +PD  T+N+LI  LC +G + EA+ L        
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F+P V++Y  ++ G CK    + +I +L +M +K C+PN   Y  +I+ +       EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 495 ELANALVSMHAISRDTF 511
            L + +++   IS D F
Sbjct: 311 NLFSEMIT-KGISPDIF 326



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDV----VMCTKLIKKFFQERKSNKAVRVMEILEKYGEP 104
           RAG+ + +     ++ + G +PDV    +M   L K+   + ++NK  R M+  E     
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD-EANKLFRKMD--ENGCSR 603

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           D   YN +I GF ++N+   A ++L  + + GFS DV T  +++  L   G+ +S
Sbjct: 604 DGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQS 658


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 238/478 (49%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           KF+  ++F+  M   G   D+V    LI  + +E    +A +++      G EP +  YN
Sbjct: 272 KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYN 331

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A++ G CK  + + A  VL  +   G +P+  TYN ++  +C R  I  A ++FD++ R 
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +++++ LI      G   +A+    EM                 G C+ G +  A
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    + +RGC  DV++YN  L  L     + + + L  EM+ RG+ P+  T++ LI  
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+DG  + A+++  A     L PD  +Y+ LI  +CK G +  A E  D MI    +PD
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y T+L  FC +G   +AL + +++ + G  PN+ + NT+      SGD  +A   +S
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+S GI PD  +YN+LI    ++  +++A  L+ +ME    +  +I+YN+I+ GFC   
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEG 691

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++ E+ +VL  M E G  P+  TY  LI G        EA    + ++    +  D F
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 20/470 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L++   +A K  E     + +   G    +  C KL+    +    + A  +  E++   
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            E +V+  N +++  CK  + E     L  +  +G   D+VTYN +I + C  G++E AF
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ +       +P ++TY  ++                   G+CK G   +A   +  + 
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILY------------------GLCKIGKYDRAKDVLIEML 354

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  P+  +YN LL  +       E +++  EM  RG+ P++V++S LI  L R+G   
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+   R  +  G+ PD   Y  LI  +C++G L  A++  D M++ GC  D+V YNT L
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK      A  +F ++ + G  P+  ++ T+       G+  +AL +   M+   ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD++TYN+LI   C+ G +  A  L  DM      P  ISY  ++ GFC +  + E++ +
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              M EKG +PN  T   LI+G    G   +A E  + ++S + I  D+F
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS-NGIIPDSF 643



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 195/393 (49%), Gaps = 18/393 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+  + +A ++   ++    LR +G S  +   N ++G L   G ++ A++++ +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R   +  V T  I++ A                  +CK         F+  +E +G   D
Sbjct: 250 RGGIELNVYTLNIMVNA------------------LCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN L+      G  EE  +L+    SRG+EP ++TY+ ++  LC+ GK + A DVL 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              + GLTP+A +Y+ L+   C+   +  A E  D M   G LPD+V++++++    +NG
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +  QAL  F ++   G  P+   Y  +      +G    AL M  EML++G   D +TYN
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           + ++ LC+  M  +A  L  +M      P   ++  +I G+CK   +++++ +  AM   
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             KP++ TY  LI+G    G    A EL + ++
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 52/294 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+   + G  D++L   E+MV    KPD V                          
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV-------------------------- 538

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN LI GFCKA ++  A ++ D +  +   PD ++Y  ++   CS G++  
Sbjct: 539 --------TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  + DQ+L    +P ++T   LI+                  G C+ G + +A++++  
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIK------------------GYCRSGDMPKAYEYLSK 632

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           + S G  PD  SYN L+   L     E+   L+ EM  RGL+ N++TY+++++  C +GK
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            ++A  VLR   E G+ PD  +Y  LI+ +     +  A  F D M+  G +PD
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 142/284 (50%), Gaps = 4/284 (1%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y++L+RT +   K  EG +    +  +G+  ++   + L+  L R G  + A ++     
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+  + Y+ + +++A CKD + +  + FL  M   G   DIV YNT++ A+C+ G  +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A ++    S  G  P + +YN +   L   G   RA  ++ EML  G+ P+  TYN+L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             +CR   + EA  +  +M      P ++S++ +I    +   + +++     M   G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS----MHAISRDTF 511
           P+   Y +LI+G    G  ++A+++ + +++    M  ++ +TF
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 245/509 (48%), Gaps = 54/509 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +++ + R G F  ++  ++ + A GC  D   C  ++    ++   ++ V ++  L  +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPD+ +YNA++ G C A + +   +++  +   G  P+V T+N +I  LC  G+ E   
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           +   Q+    C P +  Y  +I                   G+CK G    A   +  + 
Sbjct: 269 EALSQMPEHGCTPDLRMYATIID------------------GICKDGHHEVANDILSRMP 310

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S G +P+V+ YN +L+ L +  +WEE E L+ EM       + VT++IL+   C++G  +
Sbjct: 311 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI---------------------- 319
             +++L    E G  PD  +Y  +I+ +CK+G +D A+                      
Sbjct: 371 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 430

Query: 320 -------------EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
                        E + +MI  GCLP+ V +NT++   CK G  +QA+E+ +++   GC 
Sbjct: 431 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCS 490

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P++ SY+T+   L  +G    AL +++ M++KGI P+ I Y+S+ S L R+G  D+ + +
Sbjct: 491 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 550

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              ++    R     YN +I   CK    + +I+  A M   GC PNE+TY +LI G+  
Sbjct: 551 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 610

Query: 487 GGWRAEAMELANALVSMHAISRDTFKRLN 515
            G   EA +L + L S  A+ +   +   
Sbjct: 611 EGLVREAQDLLSELCSRRAVRKHLVRHFG 639



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 232/438 (52%), Gaps = 22/438 (5%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           + LI+      ++  A R ++         V AYNA+I+G+C+A Q+  A ++   +   
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAA--GVVAYNAMIAGYCRAGQVAAARRLAAAVP-- 103

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG---QT 192
              P+  TY  ++ SLC+RG+I  A  V D++    C  T     ++++A    G     
Sbjct: 104 -VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 193 DKAMKLLDEMG--------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            +A+++L   G              +C++G V +  + +R L S GC+PD++SYN +L+ 
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +W++ E+LM EM+  G  PNV T++ LI+ LCR+G  E   + L    E G TPD
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
              Y  +I   CKDG  ++A + L  M S G  P++V YNT+L   C     ++A ++  
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++    CP +  ++N +      +G   R + ++ +ML  G  PD ITY ++I+  C++G
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           +VDEAV LL +M +   +P  ISY I++ G C+  R  ++ E+++ M ++GC PN  T+ 
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462

Query: 479 LLIEGIGYGGWRAEAMEL 496
            LI  +   G   +A+EL
Sbjct: 463 TLINFMCKKGLVEQAIEL 480



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 209/396 (52%), Gaps = 19/396 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G F++    +  M  +GC PD+ M   +I    ++     A  ++  + 
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 310

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG +P+V  YN ++ G C A + E A  +L  +       D VT+NI++   C  G+++
Sbjct: 311 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              ++ +Q+L   C P VITYT +I                   G CK+G+V +A   ++
Sbjct: 371 RVIELLEQMLEHGCIPDVITYTTVIN------------------GFCKEGLVDEAVMLLK 412

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++ + GC+P+ ISY ++L+ L    +W + ++L++ MI +G  PN VT++ LI+ +C+ G
Sbjct: 413 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 472

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             E A+++L+     G +PD  SY  +I    K G+ + A+E L+ MI+ G  P+ + Y+
Sbjct: 473 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 532

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           ++ +A  + G  D+ +++F+ + D     + + YN + S+L    +  RA+   + M+S 
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 592

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           G  P+E TY  LI  L  +G+V EA  LL ++ S R
Sbjct: 593 GCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 10/268 (3%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+R+L   G+  +  + +    + G    VV Y+ +I+  CR G+   A  +  A     
Sbjct: 50  LIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + P+AY+Y P++ + C  G +  A+  LD M   GC       + IL A C+ G    A+
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
              + L   GC  +  + N + SA+   G     + ++ ++ S G EPD ++YN+++  L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C     D+   L+V+M      P V ++N +I   C+     +  E L+ M E GC P+ 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I+GI   G      E+AN ++S
Sbjct: 284 RMYATIIDGICKDGHH----EVANDILS 307


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 238/478 (49%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           KF+  ++F+  M   G   D+V    LI  + +E    +A +++      G EP +  YN
Sbjct: 272 KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYN 331

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A++ G CK  + + A  VL  +   G +P+  TYN ++  +C R  I  A ++FD++ R 
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +++++ LI      G   +A+    EM                 G C+ G +  A
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    + +RGC  DV++YN  L  L     + + + L  EM+ RG+ P+  T++ LI  
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+DG  + A+++  A     L PD  +Y+ LI  +CK G +  A E  D MI    +PD
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y T+L  FC +G   +AL + +++ + G  PN+ + NT+      SGD  +A   +S
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+S GI PD  +YN+LI    ++  +++A  L+ +ME    +  +I+YN+I+ GFC   
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEG 691

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++ E+ +VL  M E G  P+  TY  LI G        EA    + ++    +  D F
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 20/470 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L++   +A K  E     + +   G    +  C KL+    +    + A  +  E++   
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            E +V+  N +++  CK  + E     L  +  +G   D+VTYN +I + C  G++E AF
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ +       +P ++TY  ++                   G+CK G   +A   +  + 
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILY------------------GLCKIGKYDRAKDVLIEML 354

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  P+  +YN LL  +       E +++  EM  RG+ P++V++S LI  L R+G   
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+   R  +  G+ PD   Y  LI  +C++G L  A++  D M++ GC  D+V YNT L
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK      A  +F ++ + G  P+  ++ T+       G+  +AL +   M+   ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD++TYN+LI   C+ G +  A  L  DM      P  ISY  ++ GFC +  + E++ +
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              M EKG +PN  T   LI+G    G   +A E  + ++S + I  D+F
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS-NGIIPDSF 643



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 195/393 (49%), Gaps = 18/393 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+  + +A ++   ++    LR +G S  +   N ++G L   G ++ A++++ +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R   +  V T  I++ A                  +CK         F+  +E +G   D
Sbjct: 250 RGGIELNVYTLNIMVNA------------------LCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN L+      G  EE  +L+    SRG+EP ++TY+ ++  LC+ GK + A DVL 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              + GLTP+A +Y+ L+   C+   +  A E  D M   G LPD+V++++++    +NG
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +  QAL  F ++   G  P+   Y  +      +G    AL M  EML++G   D +TYN
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           + ++ LC+  M  +A  L  +M      P   ++  +I G+CK   +++++ +  AM   
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             KP++ TY  LI+G    G    A EL + ++
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 52/294 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+   + G  D++L   E+MV    KPD V                          
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV-------------------------- 538

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN LI GFCKA ++  A ++ D +  +   PD ++Y  ++   CS G++  
Sbjct: 539 --------TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  + DQ+L    +P ++T   LI+                  G C+ G + +A++++  
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIK------------------GYCRSGDMPKAYEYLSK 632

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           + S G  PD  SYN L+   L     E+   L+ EM  RGL+ N++TY+++++  C +GK
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            ++A  VLR   E G+ PD  +Y  LI+ +     +  A  F D M+  G +PD
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 142/284 (50%), Gaps = 4/284 (1%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y++L+RT +   K  EG +    +  +G+  ++   + L+  L R G  + A ++     
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+  + Y+ + +++A CKD + +  + FL  M   G   DIV YNT++ A+C+ G  +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A ++    S  G  P + +YN +   L   G   RA  ++ EML  G+ P+  TYN+L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             +CR   + EA  +  +M      P ++S++ +I    +   + +++     M   G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS----MHAISRDTF 511
           P+   Y +LI+G    G  ++A+++ + +++    M  ++ +TF
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 252/480 (52%), Gaps = 17/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F+ G  D+++   E+M ++  KP++V    +I    +     KA  ++E + 
Sbjct: 100 FNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMI 159

Query: 100 KYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + G    PD+  YN LI+ F +A++I  A    +++++ G +PDV+T NI++  +C  G 
Sbjct: 160 RKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGD 219

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +E A ++ D +      P VITY  +I A  + G+  +A ++L  M              
Sbjct: 220 VEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLD 279

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G CK GM+ +A + +  +      PDVI+Y +L+  L  +G+ +    L+ E++ +G  P
Sbjct: 280 GFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP 339

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V+ Y+ L+  LC+ G+ E+A  +++    +G       Y  L+S YC+ G +  A E L
Sbjct: 340 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+S   +P +  YN +L    K+G+  +A+ +   L   G  P+V +YNT+   L  +
Sbjct: 400 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 459

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                A  +  EM S+G  P+++T  S++  LCR G VD+A  L+V+M   R  P V+ Y
Sbjct: 460 NRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 519

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +I G CK+ R++++  VL AM  +G   ++  Y  LI  + +GG  AEAM + + +V+
Sbjct: 520 TSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVA 579



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 217/438 (49%), Gaps = 22/438 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   +RA +  E+  F E M A G  PDV+ C  L+    ++    +A+ +++ ++
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV  YN++I   C A ++  A ++L   ++   SPD+VT+N ++   C  GM+ 
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEIL---KTMSCSPDLVTFNTLLDGFCKAGMLP 288

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +V +++ R+N  P VITYTIL+                   G+C+ G V  AF  + 
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVN------------------GLCRVGQVQVAFYLLE 330

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G  PDVI+Y  L+  L   G+ EE  KL+ EM  RG    VV YS L+S  CR G
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A ++L       + P  ++Y+ ++    KDG +  A+  +  +++ G +PD+V YN
Sbjct: 391 NVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 450

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK     +A ++ ++++  GC PN  +  ++   L   G    A  ++ EM  K
Sbjct: 451 TLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 510

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ + Y SLI  LC+   +D+A  +L  M          +Y  +I+      R+ E+
Sbjct: 511 RHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEA 570

Query: 459 IEVLAAMFEKGCKPNETT 476
           + +   M  +G  P+ +T
Sbjct: 571 MAMYDEMVARGFLPDGST 588



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 239/489 (48%), Gaps = 43/489 (8%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
            HLL   VK           FR GK  + L      + +GC P++V    LI+      K
Sbjct: 31  NHLLDILVKSGHH-------FRTGKVYKDL------LHSGCSPNLVTFKILIRG---NCK 74

Query: 88  SNKAVRVMEILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           + +A+R +E L    E    PDV+ +N LI G  K    + A K+ + + S    P++VT
Sbjct: 75  AGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVT 134

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCK--PTVITYTILIQATMLEGQTDKAMKLLDE 201
           YN +I  LC  G +E A ++ ++++R   K  P ++TY  LI A                
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA---------------- 178

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               +   + +A  F   +++ G  PDV++ N+L+  +   G  EE  +++  M   G  
Sbjct: 179 --FYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+TY+ +I +LC  GK  +A ++L   K    +PD  +++ L+  +CK G L  A+E 
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEIL---KTMSCSPDLVTFNTLLDGFCKAGMLPRALEV 293

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M  +  LPD++ Y  ++   C+ G    A  + E++   G  P+V +Y ++   L  
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG+   A  ++ EM  +G     + Y+SL+S  CR G V +A  +L +M S    P + +
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YNI++ G  K   I++++ +++ +  +G  P+  TY  LI+G+       EA +LA+ + 
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473

Query: 502 SMHAISRDT 510
           S      D 
Sbjct: 474 SRGCFPNDV 482



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 27/441 (6%)

Query: 86  RKSNKAVRVMEILEKYGEPD-----VFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           R+S++    ++  +  GE D     V +YN L+    K+       KV   L   G SP+
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPN 61

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +VT+ I+I   C  G    A +    L   +  P V  + +LI     +G  D+A+KL +
Sbjct: 62  LVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQ--PDVISYNMLLRTLLN 241
            M                 G+CK G + +A + +  +  +G +  PD+++YN L+     
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             +  E      +M + G+ P+V+T +IL+S +C+DG  E+A+++L   K  G  PD  +
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ +I A C  G++  A E L  M    C PD+V +NT+L  FCK G   +ALE+ E++ 
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                P+V +Y  + + L   G    A  ++ E++ +G  PD I Y SL+  LC+ G ++
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  L+ +M     R  V+ Y+ ++ G+C+   ++++ E+LA M      P   TY +++
Sbjct: 359 EAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418

Query: 482 EGIGYGGWRAEAMELANALVS 502
            G+   G  ++A+ L + LV+
Sbjct: 419 GGLIKDGSISKAVSLISDLVA 439



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 167/354 (47%), Gaps = 27/354 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----PD 105
           AGK  E+   +++M    C PD+V    L+  F    K+    R +E+LE+       PD
Sbjct: 252 AGKVVEAAEILKTM---SCSPDLVTFNTLLDGFC---KAGMLPRALEVLEEMCRENILPD 305

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y  L++G C+  Q+++A  +L+ +  +G+ PDV+ Y  ++  LC  G IE A K+  
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++    C+  V+ Y+ L+      G   KA ++L EM                 G+ K G
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A   +  L +RG  PDV++YN L+  L    +  E   L  EM SRG  PN VT  
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++  LCR G+ +DA  ++     K   P+   Y  LI   CK  R+D A   LD M   
Sbjct: 486 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           G   D   Y  ++ +    G   +A+ +++++   G  P+ S+  T+  A  S+
Sbjct: 546 GVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 599


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 238/470 (50%), Gaps = 19/470 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++   FRAG  + ++  I+SMV+ G KP +V    ++K   +  + +KA  V   ++  G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV ++N LI GFC+A ++E A +    +R R  +PDVV+++ +IG    RG ++ A 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           +   ++      P  + YT++I                   G C+ G++ +A +    + 
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIG------------------GFCRAGLMLEALRVRDEMV 361

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC PDV++YN LL  L    +  + E+L+ EM  RG+ P++ T++ LI   CRDG  E
Sbjct: 362 AFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIE 421

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+       ++ L PD  +Y+ LI   C+ G L  A E  D M S    P+ V Y+ ++
Sbjct: 422 KALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            + C+ G  D A    +++ + G  PN+ +YN++      SG+  +    + +M    + 
Sbjct: 482 DSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVM 541

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD ITYN+LI    ++G + EA  LL  ME+   +P  ++YN+II GF     + E+  V
Sbjct: 542 PDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWV 601

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              M  +G +P+  TY+ +I G    G   ++ +L + ++       D F
Sbjct: 602 YKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 188/374 (50%), Gaps = 19/374 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    RAG+ +E+L F + M      PDVV  + LI  F +  + + A   +  + 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++G  PD   Y  +I GFC+A  +  A +V D + + G  PDVVTYN ++  LC    + 
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ +++      P + T+T LI                   G C+ G + +A QF  
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIH------------------GYCRDGNIEKALQFFD 428

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++  +  +PD+++YN L+  +   G   +  +L  +M SR + PN VTYSILI S C  G
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A   L     KG+ P+  +Y+ +I  YC+ G +    +FL  M  D  +PD++ YN
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  + K G   +A  + + + +    P+  +YN + S     G+   A  +  +M ++
Sbjct: 549 TLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR 608

Query: 399 GIEPDEITYNSLIS 412
           GIEPD  TY S+I+
Sbjct: 609 GIEPDRYTYMSMIN 622



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 163/307 (53%), Gaps = 5/307 (1%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK    G+    +  +E R   PDV+++N+++      G  E    L+  M+S+G++P +
Sbjct: 170 CKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGL 229

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ ++  L R+G+ + A +V RA    G+ PD  S++ LI  +C+ G L+ A+ F   
Sbjct: 230 VTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M      PD+V+++ ++  F + G  D A E   ++ + G  P+   Y  +      +G 
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            + AL +  EM++ G  PD +TYN+L++ LC++  + +A  LL +M+     P + ++  
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G+C+   I ++++    + ++  +P+  TY  LI+G+   G   +A EL +    MH
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD---DMH 466

Query: 505 AISRDTF 511
             SR+ F
Sbjct: 467 --SREIF 471



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 155/292 (53%), Gaps = 3/292 (1%)

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           +   A++ V S  S   + +  + N+++ +     ++ E + +++EM  R + P+VVT++
Sbjct: 142 LTADAYRLVLSSNS---EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHN 198

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +++ +  R G  E A+ ++ +   KG+ P   +Y+ ++    ++GR D A E    M + 
Sbjct: 199 VMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDAC 258

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD+ ++N ++  FC+ G  ++AL  ++++      P+V S++ +       G+   A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
              + EM   G+ PD + Y  +I   CR G++ EA+ +  +M +    P V++YN ++ G
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            CK RR++++ E+L  M E+G  P+  T+  LI G    G   +A++  + +
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/427 (32%), Positives = 216/427 (50%), Gaps = 53/427 (12%)

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            P+  TYN +I +LC RG +  A  V D +L   C P V+TY IL++AT       +AM+
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L+D M                 GMC +G V  A + +R+L S GC+P  ++YN +L+ L 
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT---- 296
           +  +W + ++L+TEM+     PN  T++++I SLCR G  + A+ +L    + G T    
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 297 -------------------------------PDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
                                          PD  +Y+ L+   C   R   A E +D M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
             +GCLPD V +NT++   C+ G    A+E+F+++ D GC PN  +Y+T+ S L  +   
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL + +EM  KG  PD+I Y  L  CL  D  ++EA+  +  ++ +   P  + YN I
Sbjct: 304 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           +LG C+  +   +I+++A M   GC P++ TYV+LIEG+ Y G+  EA EL   L S   
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422

Query: 506 ISRDTFK 512
           +     K
Sbjct: 423 LVNSLIK 429



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 213/411 (51%), Gaps = 19/411 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI      G+  ++L  ++ M+  GC PDVV    L++   + R   +A+ +++++ 
Sbjct: 10  YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   YN L+ G C    ++ A ++L  L S G  P  V YN ++  LCS     
Sbjct: 70  AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  ++LR+NC P   T+ ++I +   +G   +A++LL++M                
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C++  V  A   +  ++S GC+PD+++YN LL+ L +  +W + E+LM  M   G  
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ VT++ LI  LC+ G   DA++V +   +KG TP++ +Y  +IS   K  +LD A+E 
Sbjct: 250 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + M   G  PD + Y  +      +   ++A++   KL D G  P+   YN +   L  
Sbjct: 310 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 368

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +G    A+ +++ M+S G  PD++TY  LI  L  +G ++EA  LL+ + S
Sbjct: 369 NGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 419



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 132/237 (55%)

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++PN  TY+ LI +LC  G+  DA+ VL     +G  PD  +Y+ L+ A CK      A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E +D M ++GC P+ V YN ++   C  G+ D ALE+   L   GC P+  +YNT+   L
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            S+     A  +++EML +   P+E T+N +I  LCR G++ +A+ LL  M        +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++YN II G C+ R ++ ++ +L+ M   GCKP+  TY  L++G+       +A EL
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 20/288 (6%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F  +I    R G   +++  +E M  +GC  ++V    +I    ++R  + A+ ++
Sbjct: 146 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 205

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
             ++ YG +PD+  YN L+ G C A +   A +++D +   G  PD VT+N +IG LC +
Sbjct: 206 SKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK 265

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G++  A +VF Q+    C P  ITY+ +I       + D+A++L +EMG           
Sbjct: 266 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG----------- 314

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                   +G  PD I Y +L   L +    EE  + + ++   G+ P+ V Y+ ++  L
Sbjct: 315 -------HKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 366

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           CR+GKTE A+D++      G  PD  +Y  LI     +G L+ A E L
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 60/103 (58%)

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++P+  TYN LI  LC  G V +A+ +L DM      P V++YNI++   CK R   +++
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E++  M  +GC PN  TY +L++G+   G   +A+EL   L S
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS 105


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 241/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     ++     P +V   KL+    + +  +  + +   ++ +G  P
Sbjct: 30  KSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPP 89

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V+  N LI+ FC  N++  A  VL ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 90  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 149

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     +  +G  PD+ +Y  L+  L N+ +W+    L+ +M++  + P+VV +
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A +++    ++G+ PD  +Y  L+  +C    +D A++  D M+ 
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD+++Y T++  +CK    D+A+ +FE++      P+  +YNT+   L   G    
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD +TY+ L+  LC++  ++EA+ LL  +E++   P +  YNIII 
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG  P+  TY ++I G+   G   EA +L
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 227/452 (50%), Gaps = 19/452 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI+     GK  E+L+  + M+  G +P+VV    LI    +   ++ A+R++  
Sbjct: 127 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 186

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E+   +PDV  Y ++I   CK  Q+  A  +  ++  +G SPD+ TY  ++ +LC+   
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +    + +Q++     P V+ ++ ++ A                  +CK+G V +A + 
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDA------------------LCKEGKVTEAHEI 288

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  RG +PDV++Y  L+       + +E  K+   M+ +G  P+V++Y+ LI+  C+
Sbjct: 289 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             K + A+ +      K   PD  +Y+ L+   C  GRL  AI     M++ G +PD+V 
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+ +L + CKN + ++A+ + + +      P++  YN +   +  +G+   A  + S + 
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           SKG+ P   TYN +I  LC+ G+++EA  L ++M+     P   +YN I  GF +     
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +I++L  M  +G   + +T  LL+E +   G
Sbjct: 529 RAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 231/453 (50%), Gaps = 23/453 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+  ++L  +  M  +GC PD V+   +I     +    +A  ++ E+L      DV 
Sbjct: 192 RLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVN 251

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N ++ G C    +  A +++DR+   G +P VVTY  ++  LC     + A+ +  ++
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV 311

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              N    V+    +I+  + EG+  +A +L + MG                  S+GC P
Sbjct: 312 PEVN----VVMLNTVIRGCLAEGKLARATELYEMMG------------------SKGCPP 349

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV +YN+L+  L  +G+     +++ EM  +G  PN+VTYS L+ S CR+G  +DA  +L
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KG + ++  Y+ +I A  KDG+LD A+  +  M S GC PDI  YNTI+   C N
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D+A  IF  L + G   N  +YNT+  AL  SG     L + +EM+  G   D ++Y
Sbjct: 470 DQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSY 529

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LC++G VD ++ LL +M +   +P   SYN++I   CK  ++ +++E+   M  
Sbjct: 530 NGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 589

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +G  P+  TY  LI G+   GW   A+ L   L
Sbjct: 590 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 230/432 (53%), Gaps = 21/432 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G   E+   ++ M+ +GC P VV    L++   + R++++A     +L +  E +V   N
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY---AMLGRVPEVNVVMLN 320

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I G     ++  A ++ + + S+G  PDV TYNI++  LC  G   SA ++ D++   
Sbjct: 321 TVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK 380

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
            C P ++TY+ L+ +    G  D A  +LD+M    KG          S+ S+G      
Sbjct: 381 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS--AKGF---------SMNSQG------ 423

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            YN ++  L   GK +E  +L+ EM S+G +P++ TY+ +I  LC + + ++A  +    
Sbjct: 424 -YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E+G+  +  +Y+ LI A    GR    +   + M+  GC  D+V+YN ++ A CK GN 
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+++ + E++   G  PN  SYN + + L  +G    AL +  EML++G+ PD +TYN+L
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+ LC+ G    A+ LL  + +    P +++YNI+I   CK R ++++  +L      G 
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 471 KPNETTYVLLIE 482
            PNE T+ ++++
Sbjct: 663 VPNERTWGMMVQ 674



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 194/388 (50%), Gaps = 27/388 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           +V       +I+     GK   +    E M + GC PDV     L+    +  +   AVR
Sbjct: 313 EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +++ +E+ G  P++  Y+ L+  FC+    + A  +LD++ ++GFS +   YN +I +L 
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
             G ++ A ++  ++    CKP + TY  +I                    +C    + +
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH------------------LCNNDQMDE 474

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A     +L   G   + I+YN L+  LL+ G+W+EG +L  EM+  G   +VV+Y+ LI 
Sbjct: 475 AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIK 534

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +LC++G  + ++ +L     KG+ P+ +SY+ LI+  CK G++  A+E    M++ G  P
Sbjct: 535 ALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 594

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DIV YNT++   CK G    AL + EKL +    P++ +YN + S  W    K+R L   
Sbjct: 595 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS--WHC--KVRLLDDA 650

Query: 393 SEMLSK----GIEPDEITYNSLISCLCR 416
           S +L K    GI P+E T+  ++    R
Sbjct: 651 SMLLDKAVSGGIVPNERTWGMMVQNFVR 678



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 23/406 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   +YNA++S   +A+    A  +  R+      P   T+ +   +LC  G    A  +
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              + R  C P  + Y  +I A + +G   +A  LLDEM +                   
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL------------------M 244

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC  DV ++N ++  L  +G   E  +L+  M+  G  P+VVTY  L+  LCR  + ++A
Sbjct: 245 GCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA 304

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L    E     +    + +I     +G+L  A E  + M S GC PD+  YN ++  
Sbjct: 305 YAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG 360

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G    A+ + +++ + GC PN+ +Y+T+  +   +G    A  M+ +M +KG   +
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMN 420

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
              YN +I  L +DG +DEA+ L+ +M+S   +P + +YN II   C   +++E+  +  
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG 480

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            + E+G   N  TY  LI  + + G   E + LAN +V +H    D
Sbjct: 481 NLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV-LHGCPLD 525



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  +I    + GK DE++  ++ M + GCKPD+  CT               
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDI--CT--------------- 458

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
                            YN +I   C  +Q++ A  +   L   G   + +TYN +I +L
Sbjct: 459 -----------------YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G  +   ++ ++++   C   V++Y  LI+A   EG  D++M LL+EM         
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM--------- 552

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                     ++G +P+  SYNML+  L   GK  +  +L  EM+++GL P++VTY+ LI
Sbjct: 553 ---------MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC+ G T  A+++L     + + PD  +Y+ LIS +CK   LD A   LD  +S G +
Sbjct: 604 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIV 663

Query: 332 PDIVNYNTILAAFCK 346
           P+   +  ++  F +
Sbjct: 664 PNERTWGMMVQNFVR 678



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 1/168 (0%)

Query: 318 AIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           A+  LD M       P   +YN +L+   +      AL ++ ++     PP   ++    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL   G    AL ++  M   G  PD + Y ++I  L   G V EA  LL +M      
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             V ++N ++LG C    + E+  ++  M   GC P+  TY  L+ G+
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGL 295



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%)

Query: 387 RALGMISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           RAL ++ +M  +  + P   +YN+++S L R     +A+ L   M   R  PT  ++ + 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
               C+  R  +++ +L  M   GC P+   Y  +I  +   G  AEA  L + ++ M
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLM 244


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 246/477 (51%), Gaps = 18/477 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KFD  + F E M   G   ++     +I    +  + + A+ ++  
Sbjct: 66  VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G  P +   N+L++GFC  N+I  A  ++D++   G+ PD VT+  ++  L     
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + ++++   C+P ++TY  +I      G+ D A+ LL++M              
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   V  A      ++++G +PDV +Y+ L+  L N G+W +  +L+++M+ R 
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNVVT++ LI +  ++GK  +A  +     ++ + P+  +Y+ LI+ +C   RLD A 
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M+S  CLPD+V YNT++  FCK       +E+F  +S  G   N  +Y T+    
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           + + D   A  +  +M+S G+ P+ +TYN+L+  LC++G +++A+ +   ++ ++  P +
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +YNI+  G CK  ++ +  ++  ++  KG KP+   Y  +I G    G + EA  L
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 226/455 (49%), Gaps = 19/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
              +  E++  ++ MV  G +PD V  T L+   FQ  K+++AV ++E ++ K  +PD+ 
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y A+I+G CK  + +LA  +L+++       DVV Y+ +I SLC    ++ A  +F ++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                +P V TY+ LI      G+   A +LL +M                 LE R   P
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-----------------LE-RKINP 308

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V+++N L+      GK  E EKL  EMI R ++PN+VTY+ LI+  C   + ++A  + 
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                K   PD  +Y+ LI+ +CK  ++   +E    M   G + + V Y T++  F + 
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            + D A  +F+++   G  PN+ +YNT+   L  +G   +A+ +   +    +EPD  TY
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +   +C+ G V++   L   +     +P VI+YN +I GFCK     E+  +   M E
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G  P+  TY  LI      G +A + EL   + S
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 210/460 (45%), Gaps = 54/460 (11%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S +         + +      F  L+   F+  K  E++  +E MV  GC+PD+V   
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            +I    +  + + A+ ++  +EK   E DV  Y+ +I   CK   ++ A  +   + ++
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PDV TY+ +I  LC+ G    A ++   +L     P V+T+  LI A   EG+  +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            KL DEM                 G C    + +A Q    + S+ C PDV++YN L+  
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389

Query: 239 LLNMGKWEEGEKLM-----------------------------------TEMISRGLEPN 263
                K  +G +L                                     +M+S G+ PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           ++TY+ L+  LC++GK E A+ V    ++  + PD Y+Y+ +    CK G+++   +   
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            +   G  PD++ YNT+++ FCK G  ++A  +F K+ + G  P+  +YNT+  A    G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           DK  +  +I EM S     D  TY  L++ +  DG +D+ 
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 18/346 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  +F ++++    P+++ ++ L+ A          MK  D               F
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAI-------AKMKKFD-----------LVISF 87

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              +E  G   ++ +YN+++  L    +      ++ +M+  G  P++VT + L++  C 
Sbjct: 88  GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  +AV ++    E G  PD  ++  L+    +  +   A+  ++ M+  GC PD+V 
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++   CK G  D AL +  K+       +V  Y+T+  +L        AL + +EM 
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           +KGI PD  TY+SLISCLC  G   +A  LL DM   +  P V+++N +I  F K  ++ 
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E+ ++   M ++   PN  TY  LI G        EA ++   +VS
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 1/267 (0%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L R  L   K +E   L  EM+     P++V +S L+S++ +  K +  +      +  G
Sbjct: 36  LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           ++ + Y+Y+ +I+  C+  +L  A+  L  M+  G  P IV  N++L  FC      +A+
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +++ ++G  P+  ++ T+   L+       A+ ++  M+ KG +PD +TY ++I+ L
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G  D A+ LL  ME  +    V+ Y+ +I   CK R +++++ +   M  KG +P+ 
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 475 TTYVLLIEGI-GYGGWRAEAMELANAL 500
            TY  LI  +  YG W   +  L++ L
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDML 302



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 55/116 (47%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+     P  + ++ L+S + +    D  +     ME       + +YNI+I 
Sbjct: 49  AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             C+  +++ ++ +L  M + G  P+  T   L+ G  +G   +EA+ L + +V M
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 240/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +       DE+L     M+     P  V   +L+    + +  +  + +   ++ +G  P
Sbjct: 44  KPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPP 103

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+    +I+  C  N+++ A   L ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     + ++G  P++++YN L+  L  + +W+    LM EM+   + P+V T 
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + ++ +LC++G   +A DV+     +G+ P+  +Y+ L+  +C    +D+A++  D M+ 
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C+ ++++YNT++  +CK  + D+A+ +FE++S     PN  +YNT+   L   G    
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD +TY +L   LC++  +D+A+ LL  +E + + P +  Y  I+ 
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   + ++ ++ + +  KG +PN  TY ++I G+   G  AEA +L
Sbjct: 464 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 19/445 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI+     GK  E+L+  + M+  G +P+VV    LI    +   ++ A+R++  
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E+   +P+V  ++ LI   CK  Q+  A  +   + ++G SP++VTYN +I  LC    
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +    + ++++     P V T   ++ A                  +CK+GMV +A   
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDA------------------LCKEGMVAEAHDV 302

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  RG +P+V++YN L+       + +   K+   M+ +    NV++Y+ LI+  C+
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A+ +      + LTP+  +Y+ LI   C  GRL  AI     M++ G +PD+V 
Sbjct: 363 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y T+    CKN + D+A+ + + +      P++  Y T+   +  +G+   A  + S + 
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           SKG++P+  TYN +I  LC+ G++ EA  L  +M      P   +YN+I  GF +     
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLI 481
            +IE+L  M  +G   + +T  LL+
Sbjct: 543 RTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 19/410 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    + G    ++  + SM    C+P+VV+ + LI    ++R+  +A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ K   P++  YN+LI G CK  + +    +++ +      PDV T N ++ +L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  GM+  A  V D ++    +P V+TY  L+    L  + D A+K+ D M         
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK   V +A      +  +   P+ ++YN L+  L ++G+ ++   L  E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG  P++VTY  L   LC++   + A+ +L+A +     PD   Y  ++   C+ G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A +    + S G  P++  YN ++   CK G   +A ++F +++  GC PN  +YN 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +      + + +R + ++ EML++G   D  T   L+  L  DG+ D++V
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSV 579



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 127/271 (46%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S+N      L+    +E       M+ +   P+ V ++ L++S+ +       + + R  
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G+ PD Y+   +I++ C   R+D A   L  ++  G  PD   + T++   C  G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +AL +F+K+   G  PNV +Y T+ + L   G+   A+ ++  M     +P+ + +++L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+D  V EA  +  +M +    P +++YN +I G CK         ++  M +   
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            P+  T   +++ +   G  AEA ++ + ++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 53/292 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G   E+   ++ M+  G +P+VV    L+       + + AV+V + ++ K    +V 
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI+G+CK   ++ A  + + +  +  +P+ VTYN +I  LC  G ++ A  +F ++
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------- 202
           +     P ++TY  L          DKAM LL  +                         
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 203 ---------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
                                      G+CK+G++ +A +    +   GC P+  +YN++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            R  L   +     +L+ EM++RG   +V T ++L+  L  DG  +    +L
Sbjct: 532 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 92/188 (48%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A+   + M+     P  V++N +L +  K  +    L +  ++   G PP+V +   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + ++L        A   ++++L  G +PD  T+ +LI  LC +G + EA+ L   M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F+P V++Y  +I G CK    + +I +L +M +  C+PN   +  LI+ +       EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 495 ELANALVS 502
            + + +++
Sbjct: 231 NIFSEMIT 238



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%)

Query: 366 PPNVSS-YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           PP +SS +NT  S          AL   + ML K   P  + +N L++ + +       +
Sbjct: 31  PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L   M+S    P V +  I+I   C   R++ +   LA + + G +P+ TT+  LI G+
Sbjct: 91  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150

Query: 485 GYGGWRAEAMELANALV 501
              G   EA+ L + ++
Sbjct: 151 CVEGKIGEALHLFDKMI 167


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 240/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +       DE+L     M+     P  V   +L+    + +  +  + +   ++ +G  P
Sbjct: 44  KPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPP 103

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+    +I+  C  N+++ A   L ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     + ++G  P++++YN L+  L  + +W+    LM EM+   + P+V T 
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + ++ +LC++G   +A DV+     +G+ P+  +Y+ L+  +C    +D+A++  D M+ 
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C+ ++++YNT++  +CK  + D+A+ +FE++S     PN  +YNT+   L   G    
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD +TY +L   LC++  +D+A+ LL  +E + + P +  Y  I+ 
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   + ++ ++ + +  KG +PN  TY ++I G+   G  AEA +L
Sbjct: 464 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 19/445 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI+     GK  E+L+  + M+  G +P+VV    LI    +   ++ A+R++  
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E+   +P+V  ++ LI   CK  Q+  A  +   + ++G SP++VTYN +I  LC    
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +    + ++++     P V T   ++ A                  +CK+GMV +A   
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDA------------------LCKEGMVAEAHDV 302

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  RG +P+V++YN L+       + +   K+   M+ +    NV++Y+ LI+  C+
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A+ +      + LTP+  +Y+ LI   C  GRL  AI     M++ G +PD+V 
Sbjct: 363 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y T+    CKN + D+A+ + + +      P++  Y T+   +  +G+   A  + S + 
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           SKG++P+  TYN +I  LC+ G++ EA  L  +M      P   +YN+I  GF +     
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLI 481
            +IE+L  M  +G   + +T  LL+
Sbjct: 543 RTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 19/410 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    + G    ++  + SM    C+P+VV+ + LI    ++R+  +A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ K   P++  YN+LI G CK  + +    +++ +      PDV T N ++ +L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  GM+  A  V D ++    +P V+TY  L+    L  + D A+K+ D M         
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK   V +A      +  +   P+ ++YN L+  L ++G+ ++   L  E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG  P++VTY  L   LC++   + A+ +L+A +     PD   Y  ++   C+ G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A +    + S G  P++  YN ++   CK G   +A ++F +++  GC PN  +YN 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +      + + +R + ++ EML++G   D  T   L+  L  DG+ D++V
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSV 579



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 157/369 (42%), Gaps = 54/369 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    +  +  E+      M+  G  P++V    LI    +  +      +M E++
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    PDVF  N ++   CK   +  A+ V+D +  RG  P+VVTYN ++   C R  ++
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A KVFD ++  +C   VI+Y  LI         DKAM L +EM                
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML-------------------------- 235
            G+C  G +  A      + +RG  PD+++Y  L                          
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 236 ---------LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
                    L  +   G+ E+   L + + S+GL+PNV TY+I+I  LC+ G   +A  +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                + G +P+  +Y+ +   + ++      IE L+ M++ G   D V+  T+L     
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLS 571

Query: 347 NGNADQALE 355
           +   DQ+++
Sbjct: 572 DDGLDQSVK 580



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 127/271 (46%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S+N      L+    +E       M+ +   P+ V ++ L++S+ +       + + R  
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G+ PD Y+   +I++ C   R+D A   L  ++  G  PD   + T++   C  G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +AL +F+K+   G  PNV +Y T+ + L   G+   A+ ++  M     +P+ + +++L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+D  V EA  +  +M +    P +++YN +I G CK         ++  M +   
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            P+  T   +++ +   G  AEA ++ + ++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 53/292 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G   E+   ++ M+  G +P+VV    L+       + + AV+V + ++ K    +V 
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI+G+CK   ++ A  + + +  +  +P+ VTYN +I  LC  G ++ A  +F ++
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------- 202
           +     P ++TY  L          DKAM LL  +                         
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 203 ---------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
                                      G+CK+G++ +A +    +   GC P+  +YN++
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            R  L   +     +L+ EM++RG   +V T ++L+  L  DG  +    +L
Sbjct: 532 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 92/188 (48%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A+   + M+     P  V++N +L +  K  +    L +  ++   G PP+V +   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + ++L        A   ++++L  G +PD  T+ +LI  LC +G + EA+ L   M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F+P V++Y  +I G CK    + +I +L +M +  C+PN   +  LI+ +       EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 495 ELANALVS 502
            + + +++
Sbjct: 231 NIFSEMIT 238



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%)

Query: 366 PPNVSS-YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           PP +SS +NT  S          AL   + ML K   P  + +N L++ + +       +
Sbjct: 31  PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L   M+S    P V +  I+I   C   R++ +   LA + + G +P+ TT+  LI G+
Sbjct: 91  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150

Query: 485 GYGGWRAEAMELANALV 501
              G   EA+ L + ++
Sbjct: 151 CVEGKIGEALHLFDKMI 167



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 47/235 (20%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI 79
           S  E  PNT           +  LI      G+  +++     MVA G  PD+V    L 
Sbjct: 377 SRQELTPNT---------VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 80  KKFFQERKSNKAVRVMEILE-------------------KYGE----------------- 103
               + R  +KA+ +++ +E                   + GE                 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+V+ YN +I G CK   +  A+K+   +   G SP+  TYN++              ++
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA--FQF 216
            +++L       V T T+L+     +G      ++L ++ +  +  +G+   FQF
Sbjct: 548 LEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIVILYERNLGETLLFQF 602


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 242/453 (53%), Gaps = 37/453 (8%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +   P++  YN LI G C  ++I  A ++  R++  G +PDVVTY  +I  LC  G 
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN 189

Query: 157 IESAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           I  A K+  ++L D      NCKP VITY I++                   G+CK G  
Sbjct: 190 INIALKLHQEMLNDISRYEINCKPNVITYNIIVD------------------GLCKVGRE 231

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A Q    ++++G  P +ISYN L+      GKWEE ++L+ EM+ +GL+P++VT+++L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I +LC++GK  +A  +L    E G+ PD  +Y+ LI  +C  G L+ A E    M S GC
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+++YN ++  + K    ++A++++ ++  VG  PNV +Y+++   ++ +G    A  
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + S M + GI  +  TY   +  LC++  + EA+ L  +++S+ F+  + + N +I G C
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS---MHAIS 507
           K  ++  + E+   +  +G +PN  TY ++I G      R   ++ AN L+     +  +
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGF----CREGQVDKANVLIQKMEANGCT 527

Query: 508 RD--TFKRLNRTF----PLLDVYKEISHLATKD 534
            D  T+  L R F     L +V + +  +A KD
Sbjct: 528 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 211/444 (47%), Gaps = 24/444 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL---- 98
           LIK      +  E+      M   GC PDVV    LIK        N A+++ + +    
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 99  ---EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
              E   +P+V  YN ++ G CK  + + A ++ + ++++G  P +++YN +I   C  G
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             E + ++ D++L    +P ++T+ +LI     EG+  +A KLL  M             
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C  G +  A +   S+ S+GC+PDVISYN+L+       K EE  KL  EM+  
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  PNV+TY  L+  +   GK +DA  +    K  G+  ++Y+Y   +   CK+  L  A
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           ++    + S     +I N N ++   CK G  + A E+FEKLS+ G  PNV +Y  M   
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
               G   +A  +I +M + G  PD ITYN+L+        ++E V LL  M      P 
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564

Query: 439 VISYNIIILGFCKTRRINESIEVL 462
            I+ +I++    K  +  E + +L
Sbjct: 565 AITCSIVVDMLSKDEKYQECLHLL 588



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 24/405 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + ++N L+SG  K         + +++R  G S D  T NI++  LC+   +   F  
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F  +LR    P ++TY  LI+                  G+C +  + +A +    ++  
Sbjct: 127 FAGILRRGYSPNIVTYNTLIK------------------GLCMEHRISEATRLFLRMQKL 168

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM---ISR---GLEPNVVTYSILISSLCRD 277
           GC PDV++Y  L++ L   G      KL  EM   ISR     +PNV+TY+I++  LC+ 
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKV 228

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A  +    K +G+ P   SY+ LI  +C  G+ + +   LD M+  G  PD+V +
Sbjct: 229 GREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTF 288

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++   CK G   +A ++   + + G  P++ +YN++       GD   A  +   M S
Sbjct: 289 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG EPD I+YN LI+   +   V+EA+ L  +M     RP VI+Y+ ++ G     ++++
Sbjct: 349 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 408

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + ++ + M   G   N  TY + ++G+       EAM+L   L S
Sbjct: 409 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 221/455 (48%), Gaps = 24/455 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +  E       ++  G  P++V    LIK    E + ++A R+   ++K G  PDV  Y 
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178

Query: 111 ALISGFCKANQIELANKVLDRLRSR------GFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
            LI G C    I +A K+   + +          P+V+TYNI++  LC  G  + A ++F
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           +++      P++I+Y  LI      G+ +++ +LLDEM                  +CK+
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G V +A + +  +   G  PD+++YN L+     +G      +L   M S+G EP+V++Y
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI+   +  K E+A+ +       G  P+  +YD L+      G++D A +    M +
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 418

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G   +   Y   L   CKN    +A+++F +L        + + N +   L  +G    
Sbjct: 419 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 478

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  +  ++ ++G EP+ +TY  +I   CR+G VD+A  L+  ME+    P +I+YN ++ 
Sbjct: 479 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 538

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           GF ++ ++ E +++L  M +K   P+  T  ++++
Sbjct: 539 GFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 167/329 (50%), Gaps = 18/329 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK++ES   ++ M+  G +PD+V    LI    +E K  +A +++ ++ + G  PD+  
Sbjct: 263 AGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 322

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+LI GFC    +  A ++   + S+G  PDV++YN++I        +E A K+++++L
Sbjct: 323 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 382

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P VITY  L++   L G+ D A KL   M                 G+CK   + 
Sbjct: 383 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 442

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +    L+S   + ++ + N L+  L   GK E   +L  ++ + G EPNVVTY+I+I
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              CR+G+ + A  +++  +  G TPD  +Y+ L+  + +  +L+  ++ L  M      
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKL 360
           PD +  + ++    K+    + L +  + 
Sbjct: 563 PDAITCSIVVDMLSKDEKYQECLHLLPRF 591



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 19/275 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+     G  + +     SM + GC+PDV+    LI  + +  K  +A+++  E+L
Sbjct: 323 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 382

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P+V  Y++L+ G   A +++ A K+   +++ G + +  TY I +  LC    + 
Sbjct: 383 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 442

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K+F +L   N K  +     LI      G+ + A +L +++                
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C++G V +A   ++ +E+ GC PD+I+YN L+R      K EE  +L+  M  + + 
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGL 295
           P+ +T SI++  L +D K ++ + +L R   +KG+
Sbjct: 563 PDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 309 YCKDGRLDL--AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +CK G +    A+ F   M+     P + ++N +L+   K  +  Q   ++ ++   G  
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            +  + N + + L +           + +L +G  P+ +TYN+LI  LC +  + EA  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM------FEKGCKPNETTYVLL 480
            + M+     P V++Y  +I G C T  IN ++++   M      +E  CKPN  TY ++
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 481 IEGIGYGGWRAEAMEL 496
           ++G+   G   EA +L
Sbjct: 222 VDGLCKVGREDEAKQL 237



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 6/212 (2%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP   S++ L+S   K           + M   G   D    N +L   C      +   
Sbjct: 66  TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
            F  +   G  PN+ +YNT+   L        A  +   M   G  PD +TY +LI  LC
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 416 RDGMVDEAVGLLVDM--ESTRF----RPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
             G ++ A+ L  +M  + +R+    +P VI+YNII+ G CK  R +E+ ++   M  +G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             P+  +Y  LI G    G   E+  L + ++
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 241/473 (50%), Gaps = 23/473 (4%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R ++ +   D++E    +L K   R  K  +++     MV     P +V   +L+    +
Sbjct: 42  RASSSVSGGDLRE----RLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVK 97

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            +K +  + + + +E  G   D++ +N +I+ FC   Q+ LA  VL ++   G+ PD VT
Sbjct: 98  MKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVT 157

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
              ++   C R  +  A  + D+++    +P ++ Y  +I +                  
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDS------------------ 199

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK   V  A  F + +  +G +P+V++Y  L+  L N G+W +  +L+ +MI R + PN
Sbjct: 200 LCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPN 259

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+TYS L+ +  ++GK  +A ++        + PD  +Y  LI+  C   R+D A +  D
Sbjct: 260 VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+S GC PD+V+YNT++  FCK    +  +++F K+S  G   N  +YNT+    +  G
Sbjct: 320 LMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVG 379

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           D  +A    S+M S G+ PD  TYN L+  LC +G++++A+ +  DM+ +     +++Y 
Sbjct: 380 DVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYT 439

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +I G CKT ++ ++  +  ++  KG KP+  TY  ++ G+   G + E   L
Sbjct: 440 TVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 230/460 (50%), Gaps = 28/460 (6%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
            +TRP   ++ F+       +L+    +  K+D  +   + M   G + D+     +I  
Sbjct: 77  VKTRPFPSIVDFN-------RLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129

Query: 82  FFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           F    + + A+ V+  + K G EPD     +L++GFC+ N++  A  ++D++   G+ PD
Sbjct: 130 FCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPD 189

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +V YN +I SLC    +  A   F ++ R   +P V+TYT L+                 
Sbjct: 190 IVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN---------------- 233

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G    A + +R +  R   P+VI+Y+ LL   +  GK  E +++  EM+   +
Sbjct: 234 --GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSI 291

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P++VTYS LI+ LC   + ++A  +      KG  PD  SY+ LI+ +CK  R++  ++
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + V YNT++  F + G+ D+A E F ++   G  P++ +YN +   L 
Sbjct: 352 LFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLC 411

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G   +AL +  +M    ++ D +TY ++I  +C+ G V++A GL   +     +P ++
Sbjct: 412 DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIV 471

Query: 441 SYNIIILGFCKTRRINESIEVL-AAMFEKGCKPNETTYVL 479
           +Y  ++ G C T+ +   +E L   M ++G   N++   L
Sbjct: 472 TYTTMMSGLC-TKGLQHEVEALYTKMKQEGLMKNDSMLCL 510



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 137/268 (51%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L +T L   K  +   L  EM+     P++V ++ L+S++ +  K +  + + +  +  G
Sbjct: 56  LSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG 115

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +  D Y+++ +I+ +C   ++ LA+  L  M+  G  PD V   +++  FC+      A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +K+ ++G  P++ +YN +  +L  +     AL    E+  KGI P+ +TY +L++ L
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C  G  ++A  LL DM   +  P VI+Y+ ++  F K  ++ E+ E+   M      P+ 
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
            TY  LI G+       EA ++ + +VS
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVS 323



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 106/228 (46%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD K  DA+++ R   +    P    ++ L+SA  K  + D+ I     M   G   D+ 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++  FC       AL +  K+  +G  P+  +  ++ +          A+ ++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G  PD + YN++I  LC+   V++A+    ++     RP V++Y  ++ G C + R 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           N++  +L  M ++   PN  TY  L++     G   EA E+   +V M
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 247/474 (52%), Gaps = 22/474 (4%)

Query: 42  KLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           +++ +SF + GK  +     E M+ NG  PD +    LI  + ++ + ++A R+ E +  
Sbjct: 12  RVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVS 71

Query: 101 YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            G EP ++ YN+L++ FCK  +++ A ++   +  +GF PDVVTY+ +I  LC  G +  
Sbjct: 72  VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTE 131

Query: 160 AFK-VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A + +F +++   C    + Y  LI                   G+CK   + +A++ + 
Sbjct: 132 ALEMLFHKMIERGCSANTVAYNALIN------------------GLCKDENIERAYKLLE 173

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S+G  PD I+YN +L  L  MGK  E ++    M SRG  P+VV Y+ L+ +L ++G
Sbjct: 174 EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           KT++A+ + +    KG  PD  +Y+ ++    +   +D A E    M++ GC P+   Y+
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L+  C+    D A ++ E++S +G  P+V +YN +   L  +    +A  + S M+  
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD ++Y+ +++ LC+   V +A  L   M   +  P V+++NI++ G CK  +++E+
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
            ++L  M   GC P+   Y  L+ G+   G   +A  L  A+     +S D FK
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS-DCFK 466



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 220/416 (52%), Gaps = 18/416 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ + +  ++  FCK  ++    K+ +++   G SPD + YNI+I     +G ++ A ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           +++++    +P++ TY  L+ A   E +  +AM+L   M                 G+CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 207 KGMVGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            G V +A + +   +  RGC  + ++YN L+  L      E   KL+ EM S+G  P+ +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ ++S LCR GK  +A     +   +G +PD  +Y+ L+ A  K+G+ D A++    +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           I+ G +PD V YN+IL    +  N D+A E+F+K+   GC PN ++Y+ + S    +   
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM   G  PD +TYN L+  LC+  +VD+A  L   M      P ++SY+++
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + G CKT +++++  +   M E+   P+  T+ +L++G+   G   EA +L + + 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 198/368 (53%), Gaps = 18/368 (4%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           R  SP+  T+ +++ S C +G +   +K+F+Q+L +   P  I Y ILI     +G+ D+
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A +L +EM                   CK+  + +A +  +++  +G +PDV++Y+ ++ 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 238 TLLNMGKWEEG-EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
            L   GK  E  E L  +MI RG   N V Y+ LI+ LC+D   E A  +L     KG  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  +Y+ ++S  C+ G++  A +F D M S G  PD+V YN +L A  K G  D+A+++
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F+ +   G  P+  +YN++   L    +   A  M  +M++ G  P+  TY+ ++S  CR
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
              VD+A  +L +M      P V++YNI++ G CKT  ++++ E+ + M + GC P+  +
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 477 YVLLIEGI 484
           Y +++ G+
Sbjct: 362 YSVVLNGL 369



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 154/281 (54%), Gaps = 1/281 (0%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           R C P+  ++ ++L++    GK  +G KL  +M+  G+ P+ + Y+ILI    + G+ ++
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +       GL P  Y+Y+ L++A+CK+ ++  A+E    M   G  PD+V Y+TI++
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 343 AFCKNGNADQALE-IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             CK G   +ALE +F K+ + GC  N  +YN + + L    +  RA  ++ EM SKG  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD ITYN+++S LCR G V EA      M S  + P V++YN ++    K  + +E++++
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              +  KG  P+  TY  ++ G+       EA E+   +V+
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVA 282


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 249/488 (51%), Gaps = 25/488 (5%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +RP   L+ F        +L     R  ++D  L   + M   G   ++   + +I    
Sbjct: 66  SRPRPRLIDFS-------RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           + RK + A   M  + K G EPD   ++ LI+G C   ++  A +++DR+   G  P ++
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N ++  LC  G +  A  + D+++    +P  +TY  +++     GQT  AM+LL +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G +  AF     +E +G + D+I Y  L+R     G+W
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++G KL+ +MI R + P+VV +S LI    ++GK  +A ++ +   ++G++PD  +Y  L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  +CK+ +LD A   LD M+S GC P+I  +N ++  +CK    D  LE+F K+S  G 
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  +YNT+       G    A  +  EM+S+ + PD ++Y  L+  LC +G  ++A+ 
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +   +E ++    +  YNIII G C   +++++ ++  ++  KG KP+  TY ++I G+ 
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 486 YGGWRAEA 493
             G  +EA
Sbjct: 539 KKGSLSEA 546



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 219/461 (47%), Gaps = 43/461 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF-FQERKSNKAVRVMEILEKYGEPDVF 107
           + G  D +      M   G K D+++ T LI+ F +  R  + A  + +++++   PDV 
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A++ALI  F K  ++  A ++   +  RG SPD VTY  +I   C    ++ A  + D +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +   C P + T+ ILI                   G CK  ++    +  R +  RG   
Sbjct: 379 VSKGCGPNIRTFNILIN------------------GYCKANLIDDGLELFRKMSLRGVVA 420

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D ++YN L++    +GK E  ++L  EM+SR + P++V+Y IL+  LC +G+ E A+++ 
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++  +  D   Y+ +I   C   ++D A +    +   G  PD+  YN ++   CK 
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-------------------- 387
           G+  +A  +F K+ + G  PN  +YN +  A    GD  +                    
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTL 600

Query: 388 --ALGMISEMLSKGIEPDEITYNSLIS--CLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
             AL  ++ ML  G EPD  T+ +L+   CL  +  V +A  L  +M++  ++P V++YN
Sbjct: 601 RFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYN 660

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +I G      I++   VL  MFE+GC+PN  T    I G+
Sbjct: 661 TVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 210/435 (48%), Gaps = 42/435 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+    AG++D+    +  M+     PDVV  + LI  F +E K  +A  +  E++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD   Y +LI GFCK NQ++ AN +LD + S+G  P++ T+NI+I   C   +I+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++F ++         +TY  LIQ     G+ + A +L  EM                
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C  G   +A +    +E    + D+  YN+++  + N  K ++   L   +  +G++
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG-------- 313
           P+V TY+I+I  LC+ G   +A  + R  +E G +P+  +Y+ LI A+  +G        
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584

Query: 314 --------------RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD--QALEIF 357
                          L  A+  L  M+  G  PD+  + T+L  FC   NA    A  +F
Sbjct: 585 IEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLF 644

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           + +  +G  PNV +YNT+   L +     +  G++ +M  +G +P+ +T ++ IS LC+ 
Sbjct: 645 KNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704

Query: 418 GMVDEAVGLLVDMES 432
            +   A+ LL  ME+
Sbjct: 705 DLHGSAILLLRKMEN 719



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 192/399 (48%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ L S   +  Q +L   +  ++  +G + ++ T +IMI   C    +  AF  
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P  +T++ LI    LEG+  +A++L+D M                     
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM------------------VEM 171

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P +I+ N L+  L   GK  +   L+  M+  G +PN VTY  ++  +C+ G+T  A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++LR  +E+ +  DA  Y  +I   CKDG LD A    + M   G   DI+ Y T++  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G  D   ++   +      P+V +++ +       G    A  +  EM+ +GI PD
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY SLI   C++  +D+A  +L  M S    P + ++NI+I G+CK   I++ +E+  
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G    G    A EL   +VS
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 7/293 (2%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     GK + +    + MV+   +PD+V    L+       +  KA+ + E +EK  
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            E D+  YN +I G C A++++ A  +   L  +G  PDV TYNIMIG LC +G +  A 
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++  D   P   TY ILI+A + EG   K+ KL++E+  C   +     +F  S  
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTL 607

Query: 222 SR----GCQPDVISYNMLLRT--LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           +R    G +PDV ++  LLR   L       +   L   M + G +PNVVTY+ +I  L 
Sbjct: 608 ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
                     VL    E+G  P+A +    IS  CK      AI  L  M +D
Sbjct: 668 NGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND 720



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 1/261 (0%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR+ +   K ++   L  EM      P ++ +S L S + R  + +  +D+ + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + KG+  + Y+   +I+  C+  +L LA   +  +I  G  PD V ++T++   C  G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +ALE+ +++ ++G  P + + N + + L  +G    A+ +I  M+  G +P+E+TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++  +C+ G    A+ LL  ME  + +   + Y+III G CK   ++ +  +   M  KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 470 CKPNETTYVLLIEGIGYGG-W 489
            K +   Y  LI G  Y G W
Sbjct: 278 FKADIIIYTTLIRGFCYAGRW 298



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 110/236 (46%)

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+Y   + S   D K +DAVD+ +        P    +  L S   +  + DL ++    
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G   ++   + ++   C+      A     K+  +G  P+  +++T+ + L   G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL ++  M+  G +P  IT N+L++ LC +G V +AV L+  M  T F+P  ++Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++   CK+ +   ++E+L  M E+  K +   Y ++I+G+   G    A  L N +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +SDG     V+Y   L +   +   D A+++F++++     P +  ++ +FS +  +   
Sbjct: 31  VSDG--KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQY 88

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
              L +  +M  KGI  +  T + +I+C CR   +  A   +  +    + P  ++++ +
Sbjct: 89  DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           I G C   R++E++E++  M E G KP   T   L+ G+   G  ++A+ L + +V
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 8/165 (4%)

Query: 29  HLLSFD-VKETQFMKLIKR---SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           HL   D  K  + ++ IKR   S  A     +L  +  M+  G +PDV   T L++ F  
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCL 631

Query: 85  ERKSN--KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
           E  ++   A  + + ++  G +P+V  YN +I G    N I     VLD++  RG  P+ 
Sbjct: 632 EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           VT +  I  LC + +  SA  +  ++  DN +       ILI  T
Sbjct: 692 VTKSTFISGLCKQDLHGSAILLLRKMENDN-EDVTTKKKILIHIT 735


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 234/449 (52%), Gaps = 23/449 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG    +L  +E M + G  PD    T +I         + A   M+ L   G +P+V  
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVT 59

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y ALI+ F +A ++E A K+L+ +R RG  P++VTYN+++ +LC   M+ +A  V  +++
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                P V+T+  L+                   G CK+G V  A + +  + ++G +P+
Sbjct: 120 EGGFAPNVMTFNSLVD------------------GFCKRGNVDDARKLLGIMVAKGMRPN 161

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y+ L+  L    K+ E ++++ EM + G+ P+  TYS LI  LC+  K E+A  +LR
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G TPD   Y  +I A+CK G+L  A + L  M      PD+V YNT++   CK G
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 349 NADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              +A  I +++ + G   P+V +Y+T+ + L  S   + A  ++  M   G  PD +TY
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            ++I  LC+ G ++EA  LL  M+     P V++Y  +I G CK R+++E+  V+  M  
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            GC PN  TY  ++ G+   G   EA +L
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQL 430



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           C A  +  A ++L+ ++S GF+PD  T+  +I ++ + G ++ A    D L    C P V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRS 219
           +TYT LI A     + ++AMKLL+EM                  +CK  MVG A   V+ 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +   G  P+V+++N L+      G  ++  KL+  M+++G+ PNVVTYS LI  LC+  K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A +VL   K  G+TPDA++Y  LI   CK  +++ A + L  M   GC PD+V Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+ AFCK+G   +A +  +++      P+V +YNT+   L   G    A  ++ +M   G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 400 -IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            + PD +TY+++I+ LC+  M+ EA  LL  M      P V++Y  II G CK  R+ E+
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
             +L  M   GC PN  TY  LI G+
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGL 383



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 228/444 (51%), Gaps = 24/444 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I     AG  D ++  + SM   GC P+VV  T LI  F + +K  +A++++E + + G
Sbjct: 31  IITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 87

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++  YN L+   CK + +  A  V+ ++   GF+P+V+T+N ++   C RG ++ A 
Sbjct: 88  CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 147

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+   ++    +P V+TY+ LI       +  +A ++L+EM                 G+
Sbjct: 148 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGL 207

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   + +A Q +R +   GC PDV+ Y+ ++      GK  E +K + EM  +   P+V
Sbjct: 208 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 267

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           VTY+ +I  LC+ GK  +A  +L   +E G + PD  +Y  +I+  CK   L  A + LD
Sbjct: 268 VTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLD 327

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   GC PD+V Y TI+   CK G  ++A  + + +   GC PNV +Y T+ S L  + 
Sbjct: 328 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 387

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR--PTVIS 441
               A  ++ EM + G  P+ +TYN++++ LC  G + EA  L+  M+  R    P   +
Sbjct: 388 KVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAAT 447

Query: 442 YNIIILGFCKTRRINESIEVLAAM 465
           Y  I+     +  + E+ ++L  M
Sbjct: 448 YRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 24/347 (6%)

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C+ G + +A ++ +++      P   T+T +I A    G  D AM               
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD-------------- 46

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   L S GC P+V++Y  L+       K EE  KL+ EM  RG  PN+VTY++L+
Sbjct: 47  -------HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 99

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +LC+      A DV++   E G  P+  +++ L+  +CK G +D A + L  M++ G  
Sbjct: 100 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 159

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI-RALG 390
           P++V Y+ ++   CK+    +A E+ E++   G  P+  +Y+ +   L  + DKI  A  
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKA-DKIEEAEQ 218

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           M+  M   G  PD + Y+S+I   C+ G + EA   L +M   R  P V++YN +I G C
Sbjct: 219 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC 278

Query: 451 KTRRINESIEVLAAMFEKG-CKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K  +I E+  +L  M E G   P+  TY  +I G+       EA +L
Sbjct: 279 KLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 3/158 (1%)

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C  G+   ALE+ E++   G  P+  ++  + +A+ ++GD     G +  + S G +P+ 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD---LDGAMDHLRSMGCDPNV 57

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY +LI+   R   ++EA+ LL +M      P +++YN+++   CK   +  + +V+  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           M E G  PN  T+  L++G    G   +A +L   +V+
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA 155


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 236/469 (50%), Gaps = 19/469 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     M+     P  V   +L+    + ++      +   ++ +G  P
Sbjct: 43  KSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPP 102

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+  N LI+ FC  N++  A  VL ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 103 DVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLF 162

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T+ A++LL  M                  +CK 
Sbjct: 163 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 222

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     +  +G  PD+ +Y  L+ +L N+ +W+    L+ +MI+  + P+VV +
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 282

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A DV+     +G+ P+  +Y+ L+  +C    +D A++  D M+ 
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           +G  P++++YNT++  +CK    D+A  +FE++      PN  +YNT+       G    
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQD 401

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM++ G  PD  TY  L+  LC+   +DEA+ LL  +E +   P +  Y I+I 
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG +PN  TY ++I G+   G   EA +L
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 220/444 (49%), Gaps = 20/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+     GK  ++L+  + M+  G +P+VV    LI    +   +N A+R++  +E
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   +PDV  Y ++I   CK  Q+  A  +  ++  +G SPD+ TY  +I SLC+    +
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWK 261

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + +Q++     P V+ ++ ++ A                  +CK+G + +A   V 
Sbjct: 262 HVTTLLNQMINSKIMPDVVIFSTVVDA------------------LCKEGKITEAHDVVD 303

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V++YN L+       + +E  K+   M+  G  PNV++Y+ LI+  C+  
Sbjct: 304 MMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQ 363

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A  +     +K L P+  +Y+ L+   C  GRL  AI     M++ G +PD+  Y 
Sbjct: 364 RMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYR 422

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CK  + D+A+ + + +      P++  Y  +   +  +G+   A  + S + SK
Sbjct: 423 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  TY  +I+ LCR G++DEA  L ++M+     P   +YN I  G  + +    +
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 542

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
           I++L  M  +G   + +T  LL+E
Sbjct: 543 IQLLQEMLARGFSADVSTTTLLVE 566



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 201/410 (49%), Gaps = 20/410 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    + G  + ++  + SM    C+PDVV+ T +I    ++R+  +A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +   +   G  PD+F Y +LI   C   + +    +L+++ +    PDVV ++ ++ +L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G I  A  V D ++    +P V+TY  L+    L+ + D+A+K+ D M         
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK   + +A      +  +   P+ ++YN L+    ++G+ ++   L  E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHE 408

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++ G  P++ TY IL+  LC+    ++A+ +L+  +   + PD   Y  +I   C+ G 
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A +    + S G  P++  Y  ++   C+ G  D+A ++F ++   GC P+  +YNT
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +   L  + + +RA+ ++ EML++G   D  T   L+  LC D + D++V
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL-DQSV 577



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 193/424 (45%), Gaps = 24/424 (5%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            ++N   S     N ++ A    +R+      P  V +N ++ S+       + F + +Q
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P V T  ILI +                   C    +G AF  +  +   G Q
Sbjct: 95  MDSFGIPPDVYTLNILINS------------------FCHLNRLGFAFSVLAKILKLGHQ 136

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  ++  L+R L   GK  +   L  +MI  G +PNVVTY  LI+ LC+ G T  A+ +
Sbjct: 137 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 196

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           LR+ ++    PD   Y  +I + CKD ++  A      M+  G  PDI  Y +++ + C 
Sbjct: 197 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                    +  ++ +    P+V  ++T+  AL   G    A  ++  M+ +G+EP+ +T
Sbjct: 257 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 316

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+L+   C    +DEAV +   M    + P VISYN +I G+CK +R++++  +   M 
Sbjct: 317 YNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 376

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
           +K   PN  TY  L+     G  + +A+ L + +V+   I      R+     LLD   +
Sbjct: 377 QKELIPNTVTYNTLMHXCHVGRLQ-DAIALFHEMVAHGQIPDLATYRI-----LLDYLCK 430

Query: 527 ISHL 530
            SHL
Sbjct: 431 KSHL 434



 Score = 45.1 bits (105), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +     ++ + G +P+V   T +I    +    ++A ++   ++  G  PD  
Sbjct: 465 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 524

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  G  +  +   A ++L  + +RGFS DV T  +++  LC   + +S  ++  + 
Sbjct: 525 TYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 584

Query: 168 LR 169
           ++
Sbjct: 585 VQ 586


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 228/464 (49%), Gaps = 19/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   + GK  ++    ++M ++GC PDVV  + +I    +  +   AVR+ + +E
Sbjct: 94  YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+ALI G CKA +++ A ++L +++    +PD +TYN++I  LC  G +E
Sbjct: 154 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVE 213

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
           +A   FD++L   CKP V TY ILI      G TD A   L +                 
Sbjct: 214 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273

Query: 204 ---MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              + K   + +A   +  + + GC P + +YN LL  L  MG+ EE   L+ +++  G 
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ LI  L ++ ++ +A  + +    +GL  D   Y  LI    + G++  A  
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M S GC+PD+V  +T++    K G    A+ IF+ +   G  PN   Y+ +   L 
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     AL M+++M      PD ITYN LI  LC+ G V+ A     +M     +P V 
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 513

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +YNI+I GFCK    + +  V   M    C  N  TY  LI G+
Sbjct: 514 TYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGL 557



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 228/494 (46%), Gaps = 54/494 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G+ +E++  +  +V NGC PDVV  T LI    +E++S +A ++ + +   G   D  
Sbjct: 33  KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI    +  +I  A+ V   + S G  PDVVT + MI  L   G I +A ++F  +
Sbjct: 93  CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 152

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P  + Y+ LI       + D A+++L +M                 G+CK G V
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG--------------------------- 243
             A  F   +   GC+PDV +YN+L+      G                           
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272

Query: 244 ---------KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
                    K EE   LM ++ + G  P + TY+ L++ LC+ G+ E+A+D+LR   + G
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            TPD  +Y  LI    K+ R   A +    M   G   D V Y  ++    + G   QA 
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +++ ++  GC P+V + +TM   L  +G    A+ +   M ++G+ P+E+ Y++LI  L
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+   +D A+ +L  M+     P  I+YNI+I G CK+  +  +      M E GCKP+ 
Sbjct: 453 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 512

Query: 475 TTYVLLIEGIGYGG 488
            TY +LI G    G
Sbjct: 513 YTYNILISGFCKAG 526



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 199/441 (45%), Gaps = 67/441 (15%)

Query: 16  VRVSSSAETR---PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV 72
           VR+  S E R   PN         E  +  LI    +A K D +L  +  M    C PD 
Sbjct: 146 VRIFKSMEARGLAPN---------EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 196

Query: 73  VMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKAN----------- 120
           +    LI    +      A     E+LE   +PDV+ YN LISGFCKA            
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256

Query: 121 -------------------------QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
                                    +IE A  +++++ + G +P + TYN ++  LC  G
Sbjct: 257 ETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMG 316

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +E A  +  +++ + C P V+TYT LI     E ++ +A KL  EM +           
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL----------- 365

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                  RG   D + Y  L+R LL  GK  +   +   M S G  P+VVT S +I  L 
Sbjct: 366 -------RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 418

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G+   AV + ++ + +GL P+   Y  LI   CK  ++D A+E L  M    C PD +
Sbjct: 419 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK+G+ + A   F+++ + GC P+V +YN + S    +G+   A G+  +M
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538

Query: 396 LSKGIEPDEITYNSLISCLCR 416
            S     + +TY +LIS LC+
Sbjct: 539 SSSRCSANVVTYGALISGLCK 559



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 201/429 (46%), Gaps = 53/429 (12%)

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +IE A  +++++ + G +P + TYN ++  LC  G +E A  +  +++ + C P V+TYT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 181 ILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLESR 223
            LI     E ++ +A KL  EM +                  + G + QA    +++ S 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC PDV++ + ++  L   G+     ++   M +RGL PN V YS LI  LC+  K + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L   K+   TPD  +Y+ LI   CK G ++ A  F D M+  GC PD+  YN +++ 
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 344 FCKNGNAD------------------------------------QALEIFEKLSDVGCPP 367
           FCK GN D                                    +A+ + EK++  GC P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
            +++YN + + L   G    A+ ++ +++  G  PD +TY SLI  L ++    EA  L 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M         + Y  +I    +T +I ++  V   M   GC P+  T   +I+G+   
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 488 GWRAEAMEL 496
           G    A+ +
Sbjct: 421 GRIGAAVRI 429



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 182/390 (46%), Gaps = 55/390 (14%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           IE A  + +++  + C PT+ TY  L+                   G+CK G + +A   
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLN------------------GLCKMGRLEEAIDL 43

Query: 217 VRSLESRGCQPDVIS-----------------------------------YNMLLRTLLN 241
           +R +   GC PDV++                                   Y  L+R LL 
Sbjct: 44  LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQ 103

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            GK  +   +   M S G  P+VVT S +I  L + G+   AV + ++ + +GL P+   
Sbjct: 104 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 163

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI   CK  ++D A+E L  M    C PD + YN ++   CK+G+ + A   F+++ 
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRA-LGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           + GC P+V +YN + S    +G+   A   +  E    G   D  TY +++  L ++  +
Sbjct: 224 EAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKI 283

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EAV L+  + +    PT+ +YN ++ G CK  R+ E+I++L  + + GC P+  TY  L
Sbjct: 284 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRDT 510
           I+G+G      EA +L   + ++  ++ DT
Sbjct: 344 IDGLGKEKRSFEAYKLFKEM-ALRGLALDT 372



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 9/267 (3%)

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K EE   LM ++ + G  P + TY+ L++ LC+ G+ E+A+D+LR   + G TPD  +Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI    K+ R   A +    M   G   D V Y  ++    + G   QA  +++ ++  
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P+V + +TM   L  +G    A+ +   M ++G+ P+E+ Y++LI  LC+   +D A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +L  M+     P  I+YN++I G CK+  +  +      M E GCKP+  TY +LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 484 IGYGGWRAEAMELANALVSMHAISRDT 510
               G         N   + H+++++T
Sbjct: 241 FCKAG---------NTDAASHSLAQET 258


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 251/500 (50%), Gaps = 56/500 (11%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVMEILE-KYG-EPDVFAY 109
           F  ++  ++ +   GC  DV  C  ++     +  S ++A+R++  L   +G +PDV +Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           NA++ G C A +      +++ +   G  P+VVT+N +IG LC  G+ E   +V  Q++ 
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P +  Y     AT+L+G             +CK+G +  A + +  + S G +P+V
Sbjct: 289 HGCTPDIRMY-----ATVLDG-------------VCKEGHLEVAHEILDRMPSYGLKPNV 330

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN +L+ L +  +WE+ E+L+ EM       + VT++IL+   C++G     +++L  
Sbjct: 331 VCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQ 390

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAI------------------------------ 319
             E G  PD  +Y  +I+ +CK+G +D A+                              
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450

Query: 320 -----EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
                + +  MI  GC P+ V +NT++   CK G  +QA+E+ +++   GC P++ SY+T
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  +G    AL +++ M++KG+ P+ I Y+S+ S L ++G ++  + +  +++   
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            R   + YN +I   CK    + +IE LA M   GC PNE+TY +LI G+   G+  EA 
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630

Query: 495 ELANALVSMHAISRDTFKRL 514
           E+   L S  A+ +   K  
Sbjct: 631 EMLTELCSKGALRKHFMKHF 650



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 218/410 (53%), Gaps = 25/410 (6%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNA++SG+C+A Q+  A ++     S    P+  TY  ++ +LC+RG I  A  V D++ 
Sbjct: 86  YNAMVSGYCRAGQLASARRLA---ASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 169 RDNCKPTVITYTILIQATMLEGQTD---KAMKLLDEM---------GMC---------KK 207
           R  C P    Y ++++A    G       A+++L ++         G C         + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 208 GMVGQAFQFVRSLE-SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G V +A + +R L  S GC PDV+SYN +L+ L    +W   + LM EM+  G  PNVVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ LI  LCR+G  E    VL    + G TPD   Y  ++   CK+G L++A E LD M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S G  P++V YNT+L   C     +QA E+  ++ D  CP +  ++N +      +G   
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           R + ++ +ML  G  PD ITY ++I+  C++G++DEAV LL  M +   RP  ISY I++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G C   R  ++ ++++ M E+GC PN  T+  +I  +   G   +A+EL
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 210/394 (53%), Gaps = 19/394 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G F+     +  MV +GC PD+ M   ++    +E     A  +++ + 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG +P+V  YN ++ G C A + E A ++L  +       D VT+NI++   C  G++ 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              ++ +Q+L   C P VITYT +I                   G CK+G++ +A   ++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVIN------------------GFCKEGLIDEAVMLLK 424

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S+ + GC+P+ ISY ++L+ L +  +W + E LM++MI +G  PN VT++ +I+ LC+ G
Sbjct: 425 SMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKG 484

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             E A+++L+     G +PD  SY  +I    K G+ D A+E L+ M++ G  P+ + Y+
Sbjct: 485 LVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 544

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I +A  K G  ++ +++F+ + DV    +   YN + S+L   G   RA+  ++ M+S 
Sbjct: 545 SIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSS 604

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           G  P+E TY  LI  L  +G V EA  +L ++ S
Sbjct: 605 GCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 51/272 (18%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + G  DE++  ++SM A GC+P+ +                          
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI-------------------------- 436

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                   +Y  ++ G C A +   A  ++ ++  +G SP+ VT+N +I  LC +G++E 
Sbjct: 437 --------SYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A ++  Q+L + C P +I+Y+ +I      G+TD+A++LL+ M                 
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            + K+G + +  Q   +++    + D + YN ++ +L   G  +   + +  M+S G  P
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           N  TY+ILI  L  +G  ++A ++L     KG
Sbjct: 609 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 126/335 (37%), Gaps = 106/335 (31%)

Query: 268 SILISSLCRDGKTE-------------------------------DAVDVLRAAKEKGLT 296
           S LI SLC  G+T                                      R A    + 
Sbjct: 53  SALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPVP 112

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP------------------------ 332
           P+AY+Y P++ A C  GR+  A+  LD M   GC P                        
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 333 --------------DIVNYNTILAAFC-KNGNADQALEIFEKL-SDVGCPPNVSSYNTMF 376
                         D+ N N +L A C + G+ D+AL +   L +  GC P+V SYN + 
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM---VDEAVGLLVD---- 429
             L  +    R   ++ EM+  G  P+ +T+N+LI  LCR+G+   V + +  +VD    
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 430 ----------------------------MESTRFRPTVISYNIIILGFCKTRRINESIEV 461
                                       M S   +P V+ YN ++ G C   R  ++ E+
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           LA MF+  C  ++ T+ +L++     G     +EL
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIEL 387



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 3/176 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G  ++++  ++ M+ NGC PD++  + +I    +  K+++A+ ++ ++ 
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+++ S   K  +I    ++ D ++      D V YN +I SLC RG  +
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
            A +    ++   C P   TYTILI+    EG   +A ++L E  +C KG + + F
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTE--LCSKGALRKHF 646


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 249/488 (51%), Gaps = 25/488 (5%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +RP   L+ F        +L     R  ++D  L   + M   G   ++   + +I    
Sbjct: 66  SRPRPRLIDFS-------RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           + RK + A   M  + K G EPD   ++ LI+G C   ++  A +++DR+   G  P ++
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N ++  LC  G +  A  + D+++    +P  +TY  +++     GQT  AM+LL +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G +  AF     +E +G + D+I Y  L+R     G+W
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++G KL+ +MI R + P+VV +S LI    ++GK  +A ++ +   ++G++PD  +Y  L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  +CK+ +LD A   LD M+S GC P+I  +N ++  +CK    D  LE+F K+S  G 
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  +YNT+       G    A  +  EM+S+ + PD ++Y  L+  LC +G  ++A+ 
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +   +E ++    +  YNIII G C   +++++ ++  ++  KG KP+  TY ++I G+ 
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 486 YGGWRAEA 493
             G  +EA
Sbjct: 539 KKGSLSEA 546



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 192/399 (48%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ L S   +  Q +L   +  ++  +G + ++ T +IMI   C    +  AF  
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P  +T++ LI    LEG+  +A++L+D M                     
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM------------------VEM 171

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P +I+ N L+  L   GK  +   L+  M+  G +PN VTY  ++  +C+ G+T  A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++LR  +E+ +  DA  Y  +I   CKDG LD A    + M   G   DI+ Y T++  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G  D   ++   +      P+V +++ +       G    A  +  EM+ +GI PD
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY SLI   C++  +D+A  +L  M S    P + ++NI+I G+CK   I++ +E+  
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G    G    A EL   +VS
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 174/355 (49%), Gaps = 19/355 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+    AG++D+    +  M+     PDVV  + LI  F +E K  +A  +  E++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD   Y +LI GFCK NQ++ AN +LD + S+G  P++ T+NI+I   C   +I+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              ++F ++         +TY  LIQ                  G C+ G +  A +  +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQ------------------GFCELGKLEVAKELFQ 446

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + SR  +PD++SY +LL  L + G+ E+  ++  ++    +E ++  Y+I+I  +C   
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K +DA D+  +   KG+ PD  +Y+ +I   CK G L  A      M  DG  P+   YN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++ A    G+A ++ ++ E++   G   + S+   +   L     K   L M+S
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 135/272 (49%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY   LR+ +   K ++   L  EM      P ++ +S L S + R  + +  +D+ + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + KG+  + Y+   +I+  C+  +L LA   +  +I  G  PD V ++T++   C  G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +ALE+ +++ ++G  P + + N + + L  +G    A+ +I  M+  G +P+E+TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++  +C+ G    A+ LL  ME  + +   + Y+III G CK   ++ +  +   M  KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            K +   Y  LI G  Y G   +  +L   ++
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +SDG     V+Y   L +   +   D A+++F++++     P +  ++ +FS +  +   
Sbjct: 31  VSDG--KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQY 88

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
              L +  +M  KGI  +  T + +I+C CR   +  A   +  +    + P  ++++ +
Sbjct: 89  DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           I G C   R++E++E++  M E G KP   T   L+ G+   G  ++A+ L + +V
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 239/468 (51%), Gaps = 19/468 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG 102
           ++R   +GK  ++   I+ MV +G  P+   C ++I+   +  K+NKA  V+E++    G
Sbjct: 144 LRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGG 203

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD  + N LI+  C+  Q+  A +VL+ +R  G SP  +T+N +I  + ++ M + A  
Sbjct: 204 VPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAIS 263

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            + + LR    P  +T T+L+          KA+++LDE+                SLE 
Sbjct: 264 FWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDEL----------------SLE- 306

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GCQPDV++YN L+      G+  + + ++T + + GLEPN  TY IL+ +LC   + ++
Sbjct: 307 -GCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDE 365

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             D+L    +    PD  +Y+  I+ +CK G LD AI+ L+ M+ + C PDIV  NT+L 
Sbjct: 366 VCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLN 425

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G  ++AL I   + + G    + +YNT+  AL    +  +A+ +  EMLS GI P
Sbjct: 426 AISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISP 485

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+ITY SL+   C+  M DEA+ LL  M +  F     ++ ++I   C+  ++  + E+ 
Sbjct: 486 DDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEIT 545

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
             M  K   P  +    ++  +   GW  EA  L   LV    +  D 
Sbjct: 546 KVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVECEILKEDA 593



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 5/244 (2%)

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+  +   C  GK   A  V+      G  P+      +I    K G+ + A   L+ M+
Sbjct: 140 YADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMV 199

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G +PD ++ N ++A  C+ G    AL++ E +   GC P+  ++NT+   +++     
Sbjct: 200 LSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYD 259

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA+    E L  G  P E+T   L+  +C++    +A+ +L ++     +P V++YN +I
Sbjct: 260 RAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALI 319

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMHA 505
              CK  R+N++  +L  +  +G +PN TTY +L+  +     W     E+ + L  M+ 
Sbjct: 320 SASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWD----EVCDLLEDMNQ 375

Query: 506 ISRD 509
           ++RD
Sbjct: 376 VNRD 379



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D   T +   I    + G  D+++  +E MV N C PD+V C  L+    ++    +A+ 
Sbjct: 379 DPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALG 438

Query: 94  VMEILEKYGEPDVF-AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +   + + G   V   YN LI    K  +++ A  + D + S G SPD +TY  ++   C
Sbjct: 439 IARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFC 498

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            + M + A  + +Q+L    +    T+ ++IQA   +G+ + A ++   M
Sbjct: 499 KKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVM 548


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 237/461 (51%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D++L     MV    +P VV   K +  F ++++ +  V +   ++ +    +V++ N L
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+  C+ N ++ +  VL ++   G  PD +T+N +I  LC+ G I+ A ++F+++++   
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P VI+YT +I      G T  A+ +  +M                  +CK  +V  A +
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +  RG  P+V +YN ++    N+G+  E  +L  EM+ R + PN VT++IL+  LC
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G   +A  V     EKG+ PD  +Y+ L+  YC    ++ A +  + MI  GC P   
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN ++  +CK+   D+A  +  ++      P+  +Y+T+   L   G    AL +  EM
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G  P+ +TY  L+   C+ G +DEA+ LL  M+  +  P ++ Y I+I G     ++
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + E+ + +F  G +P+  TY ++I+G+   G   EA +L
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDL 535



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 220/452 (48%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R    D S+  +  M   G  PD +    LI     E K  +AV +  E++++  EP+V 
Sbjct: 140 RLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI 199

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  +I+G CK     +A  V  ++   G  P+VVTY+ +I SLC   ++  A +   ++
Sbjct: 200 SYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P V TY  ++      GQ ++A +L  EM                 G+CK+GMV
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A     ++  +G +PD+ +YN L+          E +K+   MI +G  P   +Y+IL
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C+  + ++A  +L     K L PD  +Y  L+   C+ GR   A+     M S G 
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP 439

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y  +L  FCK+G+ D+AL++ + + +    PN+  Y  +   ++ +G    A  
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKE 499

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + S++   G  PD  TY  +I  L ++G+ DEA  L   ME   F P   SYN++I GF 
Sbjct: 500 LFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 559

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           + +  + +I ++  M  K    N +T+ +L++
Sbjct: 560 QNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 18/392 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    ++   + M  NGCKP+VV  + +I    ++R  N A+  + E++E+   P+VF
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+++ GFC   Q+  A ++   +  R   P+ VT+ I++  LC  GM+  A  VF+ +
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P + TY  L+    L+   ++A K+ + M                 G CK   +
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +   PD ++Y+ L++ L  +G+ +E   L  EM S G  PN+VTY IL
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+ G  ++A+ +L++ KEK L P+   Y  LI      G+L++A E    +  DG 
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PDI  Y  ++    K G +D+A ++F K+ D G  PN  SYN M      + D   A+ 
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +I EM+ K    +  T+  L+    +D ++ +
Sbjct: 570 LIDEMVGKRFSVNLSTFQMLLDLESQDEIISQ 601



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 186/363 (51%), Gaps = 17/363 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------ 204
           ++ A   F +++R N +P+V+ +   + +   + Q    + L ++M +            
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V  +   +  +   G  PD I++N L+  L N GK +E  +L  EM+ RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            EPNV++Y+ +I+ LC+ G T  AVDV +  ++ G  P+  +Y  +I + CKD  ++ A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           EFL  M+  G  P++  YN+I+  FC  G  ++A  +F+++      PN  ++  +   L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  +   M  KG+EPD  TYN+L+   C   +++EA  +   M      P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI+I G+CK+RR++E+  +LA M+ K   P+  TY  L++G+   G   EA+ L   
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 500 LVS 502
           + S
Sbjct: 434 MCS 436



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 150/288 (52%), Gaps = 19/288 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + G   E+    E+M   G +PD+     L+  +  +R  N+A +V EI+ 
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P   +YN LI+G+CK+ +++ A  +L  +  +  +PD VTY+ ++  LC  G  +
Sbjct: 366 RKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F ++      P ++TY IL+                   G CK G + +A + ++
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLD------------------GFCKHGHLDEALKLLK 467

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S++ +  +P+++ Y +L+  +   GK E  ++L +++   G  P++ TY+++I  L ++G
Sbjct: 468 SMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEG 527

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
            +++A D+ R  ++ G  P++ SY+ +I  + ++     AI  +D M+
Sbjct: 528 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 94/199 (47%)

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           D  +S    +  +D A+     M+     P +V +   L +F K       + +  ++  
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                NV S N + + L        ++ ++ +M   GI PD IT+N+LI+ LC +G + E
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           AV L  +M      P VISY  +I G CKT   + +++V   M + GCKPN  TY  +I+
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241

Query: 483 GIGYGGWRAEAMELANALV 501
            +       +AME  + +V
Sbjct: 242 SLCKDRLVNDAMEFLSEMV 260


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 251/508 (49%), Gaps = 26/508 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            + V E    +L+     A + DE++   +  M   GC P+VV C  L+K    E++  +
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEE 179

Query: 91  AVRVMEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
           A+ ++  + + G     P+V  YN +I G CKA  ++ A  VL  +  +G   DVVTY+ 
Sbjct: 180 ALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYST 239

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           +I  LC    ++ A  V   ++    KP V+TY  +I         D+A  +L  M    
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG 299

Query: 203 -------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+CK   V +A   ++ +  +  +PD+ +YN L+   L+ G+W+E  
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           + + EM +RGL+P+VVTYS+L+  LC++GK  +A  +      KG+ P+   Y  L+  Y
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
              G +    + LD M+++G  P+   +N +L A+ K    D+A+ IF ++S  G  P+V
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y  +  AL   G    A+   ++M++ G+ P+ + +NSL+  LC     ++A  L  +
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M     RP V+ +N I+   C   ++  +  ++ +M   G +PN  +Y  LI G    G 
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599

Query: 490 RAEAMELANALVSM----HAISRDTFKR 513
             EA +L + +VS+      IS DT  R
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLR 627



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 239/466 (51%), Gaps = 18/466 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +A   D +   ++ M+  G K DVV  + +I    + +  ++A  V++ +++K  +PDV 
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I G CKA  ++ A  VL  +  +G  PDVVTYN +I  LC    ++ A  V   +
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           +  + KP + TY  LI   +  G+  + ++ L+EM                  +CK G  
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G +P+V  Y +LL      G   +   L+  M++ G+ PN   ++I+
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + +  +    ++A+ +     + GL+PD  +Y  LI A CK GR+D A+   + MI+DG 
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V +N+++   C     ++A E+F ++ D G  PNV  +NT+   L + G  + A  
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +I  M   G+ P+ I+YN+LI   C  G  DEA  LL  M S   +P +ISY+ ++ G+C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           KT RI+ +  +   M  KG  P   TY  +++G+ +    +EA EL
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 248/494 (50%), Gaps = 20/494 (4%)

Query: 29  HLLSFDVKE--TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           H++   VK     +  +I    +A   D +   ++ M+  G KPDVV    +I    + +
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 87  KSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
             ++A  V++ +++K  +PD+  YN LI G+    + +   + L+ + +RG  PDVVTY+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
           +++  LC  G    A K+F  ++R   KP V  Y IL+      G       LLD M   
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                            KK M+ +A      +   G  PDV++Y +L+  L  +G+ ++ 
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
                +MI+ G+ PN V ++ L+  LC   + E A ++     ++G+ P+   ++ ++  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C +G++ +A   +D M   G  P++++YNT++   C  G  D+A ++ + +  VG  P+
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           + SY+T+      +G    A  +  EML KG+ P  +TY++++  L       EA  L +
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M  +  +  + +YNII+ G CKT  ++E+ ++  ++  K  +PN  T+ ++I+ +  GG
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738

Query: 489 WRAEAMELANALVS 502
            + +AM+L  ++ S
Sbjct: 739 RKKDAMDLFASIPS 752



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 206/424 (48%), Gaps = 27/424 (6%)

Query: 89  NKAVRVMEILEKYGEP-DVFAYNALISGFCKA---NQIELANKVLDRLR---SRGFSPDV 141
           + A+++ + L  +  P  V A+N L++   +A   +  ELA  + +R+    S    PD+
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            TY+I+ G  C  G IE  F  F  +L+   +   +    L+       + D+AM +L  
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL-- 148

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-- 259
                          +R +   GC P+V+S N LL+ L N  + EE  +L+  M   G  
Sbjct: 149 ---------------LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG 193

Query: 260 -LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              PNVVTY+ +I  LC+    + A  VL+   +KG+  D  +Y  +I   CK   +D A
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L +MI  G  PD+V YNTI+   CK    D+A  + + + D G  P+V +YNT+   
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +    RA G++  M+ K ++PD  TYN LI      G   E V  L +M +    P 
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++Y++++   CK  +  E+ ++   M  KG KPN T Y +L+ G    G  A+  +L +
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433

Query: 499 ALVS 502
            +V+
Sbjct: 434 LMVA 437



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 201/416 (48%), Gaps = 18/416 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+      M+  G KP+V +   L+  +           +++++   G  P+ +
Sbjct: 386 KNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N ++  + K   I+ A  +  R+   G SPDVVTY I+I +LC  G ++ A   F+Q+
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + D   P  + +  L+       + +KA +L  EM                  +C +G V
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + + S+E  G +P+VISYN L+      G+ +E  +L+  M+S GL+P++++Y  L
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+ G+ ++A  + R    KG+TP A +Y  ++       R   A E    MI  G 
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN IL   CK    D+A +IF+ L      PN+ ++  M   L+  G K  A+ 
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + + + S G+ P+ +TY  ++  + ++G++DE   L + ME +   P  +  N II
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAII 801



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 18/392 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNA 111
            DE+++    M  +G  PDVV    LI    +  + + AV +  +++     P+   +N+
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+ G C  ++ E A ++   +  +G  P+VV +N ++ +LC+ G +  A ++ D + R  
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
            +P VI+Y  LI    L G+TD+A +LLD M                 G CK G +  A+
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              R +  +G  P  ++Y+ +L+ L +  ++ E ++L   MI  G + ++ TY+I+++ L
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+    ++A  + ++   K L P+  ++  +I    K GR   A++    + S G +P++
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNV 759

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V Y  ++    + G  D+   +F  +   GC P+    N +  +L   G+ +RA   +S+
Sbjct: 760 VTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSK 819

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           +       +  T + LIS   R+   + A  L
Sbjct: 820 IDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 260/521 (49%), Gaps = 42/521 (8%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  V+ ++ MKL+          E++Y    M   G KPDVV    L+K
Sbjct: 147 QADTVVYNHLLNVLVEGSK-MKLL----------ETVY--SEMGERGIKPDVVTFNTLMK 193

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +   G  PD   +  L+ GF +   I+ A +V  R+   G SP
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSP 253

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     Q + +  +P  ITY   +                
Sbjct: 254 TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVN--------------- 298

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C+ G VG A + +  +   G  PDV +YN+++  L   G+ EE + ++ +M+ RG
Sbjct: 299 ---GLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++ T++ LI +LC   + E+A+D+ R    KGL+PD Y+++ LI+A CK G   LA+
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M S GC PD V YNT++   C  G   +AL++ +++   GCP +  +YNT+   L
Sbjct: 416 RLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGL 475

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M  +GI  + IT+N+LI  LC+D  +D+A  L+  M S   +P  
Sbjct: 476 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNN 535

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+YN I+  +CK   I ++ ++L  M   G + +  TY  LI G+   G    A++L   
Sbjct: 536 ITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595

Query: 500 L---------VSMHAISRDTFKRLNRTFPLLDVYKEISHLA 531
           +          + + + +  F+R N T   +++++E++ + 
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRR-NNTRDAMNLFREMTEVG 635



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 231/444 (52%), Gaps = 20/444 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +ANG +PD +     +    Q      A++VM+++ + G
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEG 320

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +++  CK  Q+E A  +L+++  RG  PD+ T+N +I +LCS   +E A 
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEAL 380

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  Q+      P V T+ ILI A    G    A++L +EM                  +
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM------------------K 422

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S GC PD ++YN L+  L ++GK  +   L+ EM S G   + VTY+ +I  LC+  + E
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++ +A +++ LI   CKD R+D A + +  MIS+G  P+ + YN+IL
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I + ++  G   +V +Y T+ + L  +G    AL ++  M  KG+ 
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR 602

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
                YN +I  L R     +A+ L  +M      P   +Y I+  G C+    I E+ +
Sbjct: 603 ATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFD 662

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
            L  M +KG  P  +++ +L EG+
Sbjct: 663 FLLEMVDKGFIPEFSSFRMLAEGL 686



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 226/467 (48%), Gaps = 18/467 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  L+K   RA +   ++  +E M ++G  PD    T L++ F +E     A+RV   +L
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML 247

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P     N LI+G+CK  ++E A   + +  + GF PD +TYN  +  LC  G + 
Sbjct: 248 EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG 307

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A KV D ++++   P V TY I++      GQ ++A  +L++M                
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +C    + +A    R +  +G  PDV ++N+L+  L  +G  +   +L  EM S G  
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ VTY+ LI +LC  GK   A+D+L+  +  G      +Y+ +I   CK  R++ A E 
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEV 487

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M   G   + + +NT++   CK+   D A ++  ++   G  PN  +YN++ +    
Sbjct: 488 FDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK 547

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            GD  +A  ++  M + G E D +TY +LI+ LC+ G    A+ LL  M     R T  +
Sbjct: 548 QGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKA 607

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           YN +I    +     +++ +   M E G  P+  TY ++  G+  GG
Sbjct: 608 YNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 232/455 (50%), Gaps = 20/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  +++    E MV+ G KP+ V+ T LIK   QE +  +AVR++++++K G +PDV 
Sbjct: 458 RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I G CK+ ++E A   L  +  RG  P+V TY  +I   C  G ++ A + F ++
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L     P  +  T LI                   G CK+G   +A    R +  R   P
Sbjct: 578 LGCGIAPNDVVCTALID------------------GYCKEGSTTEATSIFRCMLGRSVHP 619

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV +Y+ L+  LL  GK +   +L++E + +GL P+V TY+ +IS  C+ G    A  + 
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +KG++P+  +Y+ LI+  CK G ++ A E  D +   G   + V Y TI+  +CK+
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A  +F++++  G PP+   Y+ +       G+  +AL +  E + KG      + 
Sbjct: 740 GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SL 798

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+   C+ G V EA  LL DM     +P  ++Y I+I   CKT  + E+ +    M +
Sbjct: 799 NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   PN  TY  L+ G    G R+E   L + +++
Sbjct: 859 RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIA 893



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 240/481 (49%), Gaps = 19/481 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           RAG+ DE+    + M   G   DV   + LI  F ++++  +A  ++E +  K  +P   
Sbjct: 283 RAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY ALI GF +      A +V + + +RG   ++ TYN ++  +C  G +E A  + +++
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    KP   TY  +I+  + E  T +   LL EM                 G+C+ G +
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    + S G +P+ + Y  L++  +  G+++E  +++  M  +G++P+V+ Y+ +
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  K E+A D L    E+GL P+ Y+Y  LI  YCK G + +A  +   M+  G 
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V    ++  +CK G+  +A  IF  +      P+V +Y+ +   L  +G    A+ 
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++SE L KG+ PD  TYNS+IS  C+ G + +A  L   M      P +I+YN +I G C
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I  + E+   +  KG   N  TY  +I+G    G  ++A  L + + ++  +  D+
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM-TLKGVPPDS 761

Query: 511 F 511
           F
Sbjct: 762 F 762



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 241/530 (45%), Gaps = 89/530 (16%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALI 113
           E+   +E M + G KP  V  T LI  F ++  S +A RV E +L +  + ++F YNAL+
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI------------------------- 148
            G CK   +E A+ +L+ +   G  PD  TYN MI                         
Sbjct: 384 KGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLV 443

Query: 149 ----------GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
                       LC  G IE A +VF+ ++    KP  + YT LI+  + EG+  +A+++
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L  M                 G+CK   + +A  ++  +  RG +P+V +Y  L+     
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+ +  ++   EM+  G+ PN V  + LI   C++G T +A  + R    + + PD  +
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI    ++G+L  A+E L   +  G +PD+  YN+I++ FCK G   +A ++ E + 
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 362 DVGCPPNVSSYNTMFSAL-----------------------------------WSSGDKI 386
             G  PN+ +YN + + L                                     SG+  
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +A  +  EM  KG+ PD   Y++LI    ++G  ++A+ L ++     F  T  S N ++
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALM 802

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            GFCK+ ++ E+ ++L  M +K  KP+  TY +LI+     G+  EA + 
Sbjct: 803 DGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 230/510 (45%), Gaps = 53/510 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + G FDE++ F      NG    ++ C  L+    +  K     R    +L
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E     DV+ Y  LI+   +A   +   ++L  +  +G SP +VTYN++IG LC  G ++
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++   + +      V TY+ILI     + +  +A  +L+EM                
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  ++G  G+AF+    + +RG + ++ +YN L++ +   G  E+ + L+ EMI  G++
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 262 PNVVTYS-----------------------------------ILISSLCRDGKTEDAVDV 286
           P+  TY+                                   ++I+ LCR G  EDA  V
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G+ P+A  Y  LI  + ++GR   A+  L  M   G  PD++ YN+++   CK
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +   ++A +   ++ + G  PNV +Y  +      SG+   A     EML  GI P+++ 
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVV 588

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
             +LI   C++G   EA  +   M      P V +Y+ +I G  +  ++  ++E+L+   
Sbjct: 589 CTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           EKG  P+  TY  +I G    G   +A +L
Sbjct: 649 EKGLVPDVFTYNSIISGFCKQGGIGKAFQL 678



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 17/390 (4%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  LI    R GK   ++  +   +  G  PDV     +I  F ++    KA ++ E + 
Sbjct: 624  YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            + G  P++  YNALI+G CKA +IE A ++ D +  +G + + VTY  +I   C  G + 
Sbjct: 684  QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             AF++FD++      P    Y+ LI     EG T+KA+ L  E                 
Sbjct: 744  KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMD 803

Query: 203  GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            G CK G V +A Q +  +  +  +PD ++Y +L+      G  +E E+   +M  R L P
Sbjct: 804  GFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMP 863

Query: 263  NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            N +TY+ L+S     G+  +   +      K + PD  ++  +I A+ K+G     ++ +
Sbjct: 864  NALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLV 923

Query: 323  DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            D M+  G        + ++   C+  +  + L++ EK+ + G   ++++ +T+      +
Sbjct: 924  DDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKA 983

Query: 383  GDKIRALGMISEMLSKGIEPDEITYNSLIS 412
            G    A  ++  M+     PD    N LI+
Sbjct: 984  GKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 142/301 (47%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G  KKG+  +A  F    +  G    ++  N LL  LL   K E   +    M+   +  
Sbjct: 175 GYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLH 234

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V TY+ LI++  R G  ++   +L   +EKG +P   +Y+ +I   C+ G +D A E  
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELK 294

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G + D+  Y+ ++  F K     +A  + E++   G  P   +Y  +       
Sbjct: 295 KLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQ 354

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD   A  +  EML++G++ +  TYN+L+  +C+ G +++A  LL +M     +P   +Y
Sbjct: 355 GDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N +I G+ K +  +   ++L+ M +    P   T  ++I G+   G   +A  +   +VS
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS 474

Query: 503 M 503
           +
Sbjct: 475 L 475



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V + +LI    + G  ++AV     AK  G        + L+S   K  +L+L   F + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+    L D+  Y  ++ A  + GNA +   +  ++ + GC P++ +YN +   L  +G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +   M  KG+  D  TY+ LI    +     EA  +L +M S   +P  ++Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I GF +     E+  V   M  +G K N  TY  L++G+   G   +A  L N ++ M 
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI-MV 405

Query: 505 AISRDT 510
            I  DT
Sbjct: 406 GIKPDT 411



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 126/329 (38%), Gaps = 66/329 (20%)

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVV------------------------------ 265
           + T LN   WE     +  ++S  L P+VV                              
Sbjct: 45  ITTFLNQKNWES----LLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQK 100

Query: 266 --TYSILISSLCRD-------------------GKTEDAVDVLRAAKEKGLTPD------ 298
             ++SIL   LC                     G +E    ++++ KE  L         
Sbjct: 101 LQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENS 160

Query: 299 -----AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
                   ++ LI  Y K G  D A+ F      +G +  ++  N +L+   K    +  
Sbjct: 161 NNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELF 220

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
              +  + +     +V +Y  + +A + +G+      ++ EM  KG  P  +TYN +I  
Sbjct: 221 WRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGG 280

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LCR G VDEA  L   M+       V +Y+I+I GF K +R  E+  +L  MF KG KP 
Sbjct: 281 LCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPG 340

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVS 502
              Y  LI+G    G   EA  +   +++
Sbjct: 341 HVAYTALIDGFMRQGDSGEAFRVKEEMLA 369


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 230/443 (51%), Gaps = 19/443 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKY 101
           LIK   RA +   ++  +E M ++G  PD    T L++ F +E     A+RV  +++E  
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P     N LI+G+CK  ++E A   + +  + GF PD VTYN  +  LC  G +  A 
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           KV D +L++   P V TY  +I      G+ D+A           KG+V Q       + 
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA-----------KGIVNQ-------MV 364

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RGC PD  ++N L+  L +  + EE   L  E+  +GL P+V T++ILI++LC+ G   
Sbjct: 365 DRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 424

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
             + +    K  G TPD  +Y+ LI   C  G+L  A++ L+ M S+GC    V YNTI+
Sbjct: 425 LGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTII 484

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            A CK    ++A E+F+++   G   +  ++NT+   L  +     A  +I +M+ +G++
Sbjct: 485 DALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 544

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ ITYNS+++  C+ G + +A  +L  M +  F   V++Y  +I G CK  R   ++++
Sbjct: 545 PNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 604

Query: 462 LAAMFEKGCKPNETTYVLLIEGI 484
           L  M  KG +P    Y  +I+ +
Sbjct: 605 LRGMRIKGIRPTPKAYNPVIQSL 627



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 219/446 (49%), Gaps = 21/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K  ES+Y    M   G +PDVV    LIK   +  +   AV ++E +  +G  PD   + 
Sbjct: 179 KLLESVY--NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+ GF +   IE A +V  ++   G SP  VT N++I   C  G +E A     Q + D
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P  +TY   +                   G+C+ G V  A + +  +   G  PDV 
Sbjct: 297 GFEPDQVTYNTFVH------------------GLCQNGHVSHALKVMDLMLQEGHDPDVF 338

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN ++  L   G+ +E + ++ +M+ RG  P+  T++ LI +L    + E+A+D+ R  
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             KGL+PD Y+++ LI+A CK G   L I   + M S GC PD V YN ++   C  G  
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             AL++  ++   GCP +  +YNT+  AL        A  +  +M ++GI    +T+N+L
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL 518

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+   +D+A  L+  M     +P  I+YN I+  +CK   I ++ ++L  M   G 
Sbjct: 519 IDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +  TY  LI G+   G    A++L
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKL 604



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 234/459 (50%), Gaps = 23/459 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD V     +    Q    + A++VM+++ + G
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +I+   K  +++ A  +++++  RG  PD  T+N +I +L S+  +E A 
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +L      P V T+ ILI A                  +CK G      +    ++
Sbjct: 393 DLARELTVKGLSPDVYTFNILINA------------------LCKVGDPHLGIRLFEEMK 434

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S GC PD ++YN+L+  L +MGK      L+ EM S G   + VTY+ +I +LC+  + E
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++  A +++ LI   CK  R+D A E ++ M+ +G  P+ + YN+IL
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK GN  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KGI 
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
           P    YN +I  L R   + +A+ L  +M      P  ++Y I+    C+    I E+ +
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFD 674

Query: 461 VLAAMFEKGCKPNETTYVLLIEG---IGYGGWRAEAMEL 496
            L  M  KG  P  +++ +L EG   +G   +   A+EL
Sbjct: 675 FLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIEL 713



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 237/466 (50%), Gaps = 22/466 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEIL 98
           + +++++   AG FD     +  M   G +   V+    ++ + + R+ + AV  V+  L
Sbjct: 92  YEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQL 151

Query: 99  EK--YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +   +G + D   +N L++   + ++++L   V + +  RG  PDVVT N +I +LC   
Sbjct: 152 DNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAH 211

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            + +A  + +++      P   T+T L+Q  + EG  + A+++  +M             
Sbjct: 212 QVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM------------- 258

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +E+ GC P  ++ N+L+     MG+ E+    + + I+ G EP+ VTY+  +  LC
Sbjct: 259 ----MEA-GCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLC 313

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G    A+ V+    ++G  PD ++Y+ +I+   K+G LD A   ++ M+  GCLPD  
Sbjct: 314 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +NT++ A       ++AL++  +L+  G  P+V ++N + +AL   GD    + +  EM
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G  PDE+TYN LI  LC  G +  A+ LL +MES     + ++YN II   CK  RI
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E+ EV   M  +G   +  T+  LI+G+       +A EL   +V
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 152/283 (53%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  RG QPDV++ N L++ L    +      ++ EM S G+ P+  T++ L+     +G 
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E A+ V     E G +P   + + LI+ YCK GR++ A+ ++   I+DG  PD V YNT
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
            +   C+NG+   AL++ + +   G  P+V +YNT+ + L  +G+   A G++++M+ +G
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             PD  T+N+LI  L     ++EA+ L  ++      P V ++NI+I   CK    +  I
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +   M   GC P+E TY +LI+ +   G    A++L N + S
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMES 470


>gi|388490582|gb|AFK33357.1| unknown [Medicago truncatula]
          Length = 389

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 217/405 (53%), Gaps = 22/405 (5%)

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           + K NQ   + ++LDRL  +G  P+VVTY+I+I +      ++ A K+ D ++    KP 
Sbjct: 2   YGKLNQ---SMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPN 58

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           +++Y +L+                   G+CK+G    A +  + L  +G +P V+S+N+L
Sbjct: 59  LVSYNVLLT------------------GLCKEGRTEDAIKLFKELPEKGFKPCVVSHNIL 100

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           LR+L   G+W+E  +LM  M   G  P+VVTY++LI+SL  DG+ E A  VL    + G 
Sbjct: 101 LRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGF 160

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
              A SY+P+I+  CK+GR+DL ++ LD MI+     +   YN I A  C+ G   +A  
Sbjct: 161 KVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAI-ALLCERGMVKEAFL 219

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I E+L      P    Y  + + L   G    A  ++ EM   G  PD  TY+SLI  +C
Sbjct: 220 ILERLGKKQNYPISDFYKNVITLLCRKGSTYPAFQILYEMTVHGFTPDSYTYSSLIRGMC 279

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R+GM+DEA+ +   +E   + P V +YN +ILG CK++RI+ SIE+   M  KGC PNE 
Sbjct: 280 REGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEM 339

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 520
           TY + +E + +      A  L N L     +S+ T +RL   + L
Sbjct: 340 TYNIFVEALAFEEEMELAATLLNELYLKGVLSQSTVERLFMQYAL 384



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 198/368 (53%), Gaps = 19/368 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           GK ++S+  ++ ++  G  P+VV  + LI+  ++ER  ++A+++++ I+ K G+P++ +Y
Sbjct: 3   GKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSY 62

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L++G CK  + E A K+   L  +GF P VV++NI++ SLC  G  + A+++   + R
Sbjct: 63  NVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDR 122

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQ 212
           D   P+V+TY +LI +  ++G+ ++A K+LDEM                  +CK+G V  
Sbjct: 123 DGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDL 182

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             Q +  + +R    +  +YN  +  L   G  +E   ++  +  +   P    Y  +I+
Sbjct: 183 VVQCLDQMINRRFHLNGGTYNA-IALLCERGMVKEAFLILERLGKKQNYPISDFYKNVIT 241

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LCR G T  A  +L      G TPD+Y+Y  LI   C++G LD A++    +   G +P
Sbjct: 242 LLCRKGSTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVP 301

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            + NYN ++   CK+   D ++EIF+ + + GC PN  +YN    AL    +   A  ++
Sbjct: 302 HVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEMELAATLL 361

Query: 393 SEMLSKGI 400
           +E+  KG+
Sbjct: 362 NELYLKGV 369



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 164/319 (51%), Gaps = 17/319 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI+ +++    DE++  ++ ++A G KP++V    L+    +E ++  A+++  E+ EK 
Sbjct: 30  LIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG 89

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P V ++N L+   C   + + A +++  +   G +P VVTYN++I SL   G IE AF
Sbjct: 90  FKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAF 149

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
           KV D++ +   K +  +Y  +I     EG+ D  ++ LD+M                 +C
Sbjct: 150 KVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALLC 209

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GMV +AF  +  L  +   P    Y  ++  L   G      +++ EM   G  P+  
Sbjct: 210 ERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGSTYPAFQILYEMTVHGFTPDSY 269

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS LI  +CR+G  ++A+ +    +E G  P   +Y+ LI   CK  R+D++IE    M
Sbjct: 270 TYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMM 329

Query: 326 ISDGCLPDIVNYNTILAAF 344
           ++ GC+P+ + YN  + A 
Sbjct: 330 VNKGCMPNEMTYNIFVEAL 348


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 239/468 (51%), Gaps = 19/468 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG 102
           ++R   +GK  ++   I+ MV +G  P+   C ++I+   +  K+NKA  V+E++    G
Sbjct: 223 LRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGG 282

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD  + N LI+  C+  Q+  A +VL+ +R  G SP  +T+N +I  + ++ M + A  
Sbjct: 283 VPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAIS 342

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            + + LR    P  +T T+L+          KA+++LDE+                SLE 
Sbjct: 343 FWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDEL----------------SLE- 385

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GCQPDV++YN L+      G+  + + ++T + + GLEPN  TY IL+ +LC   + ++
Sbjct: 386 -GCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDE 444

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             D+L    +    PD  +Y+  I+ +CK G LD AI+ L+ M+ + C PDIV  NT+L 
Sbjct: 445 VCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLN 504

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G  ++AL I   + + G    + +YNT+  AL    +  +A+ +  EMLS GI P
Sbjct: 505 AISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISP 564

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+ITY SL+   C+  M DEA+ LL  M +  F     ++ ++I   C+  ++  + E+ 
Sbjct: 565 DDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEIT 624

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
             M  K   P  +    ++  +   GW  EA  L   LV    +  D 
Sbjct: 625 KVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVECEILKEDA 672



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 5/244 (2%)

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+  +   C  GK   A  V+      G  P+      +I    K G+ + A   L+ M+
Sbjct: 219 YADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMV 278

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G +PD ++ N ++A  C+ G    AL++ E +   GC P+  ++NT+   +++     
Sbjct: 279 LSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYD 338

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA+    E L  G  P E+T   L+  +C++    +A+ +L ++     +P V++YN +I
Sbjct: 339 RAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALI 398

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMHA 505
              CK  R+N++  +L  +  +G +PN TTY +L+  +     W     E+ + L  M+ 
Sbjct: 399 SASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWD----EVCDLLEDMNQ 454

Query: 506 ISRD 509
           ++RD
Sbjct: 455 VNRD 458



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D   T +   I    + G  D+++  +E MV N C PD+V C  L+    ++    +A+ 
Sbjct: 458 DPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALG 517

Query: 94  VMEILEKYGEPDVF-AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +   + + G   V   YN LI    K  +++ A  + D + S G SPD +TY  ++   C
Sbjct: 518 IARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFC 577

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            + M + A  + +Q+L    +    T+ ++IQA   +G+ + A ++   M
Sbjct: 578 KKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVM 627


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 237/463 (51%), Gaps = 18/463 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L     R  ++D  L   + M   G   D+     +I  F + RK   A   M  + 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP+   +N L++G C   ++  A +++D +      PD++T N ++  LC +  + 
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVS 212

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  +++ + C+P   TY  ++      G T  A+ LL +M                
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK G +  A  F   +E++G + +V +YN L+ +  + G+W++G +L+ +MI+R + 
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNVVT+S LI SL ++GK  +A D+      +G+ P+  +Y+ LI   C D RLD A + 
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +D M+S GC PDI  YN ++  FCK    D  + +F K+S  G   +  +Y+T+      
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           S   I A  +  EM+S+G+ P  +TY  L+  LC +G ++EA+G+L  M   +    +  
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           YNIII G C   +++++  +  ++  KG K +  +Y +++ G+
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGL 555



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 218/436 (50%), Gaps = 20/436 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDVFAYNALISGFCKANQIEL 124
           G +P+ V    L+     E +  +AV +++  +L ++  PD+   N +++G C  +++  
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH-VPDLITLNTIVNGLCLKDRVSE 213

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A  ++ R+ + G  P+  TY  ++  +C  G   SA  +  ++     KP V+TYTI+I 
Sbjct: 214 AVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIID 273

Query: 185 ATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
               +G+ D A+    EM                   C  G      Q +R + +R   P
Sbjct: 274 NLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++++ L+ +L+  GK  E + L  EMI+RG+EPN +TY+ LI  LC D + ++A  ++
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KG  PD ++Y+ LI+ +CK  ++D  +     M   G + D V Y+T++  FC++
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQS 453

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                A ++F+++   G  P + +Y  +   L  +G+   ALG++ +M    +E D   Y
Sbjct: 454 RKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIY 513

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I  +C    VD+A  L   + S   +  + SYNI++ G CK   ++E+  +   M E
Sbjct: 514 NIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKE 573

Query: 468 KGCKPNETTYVLLIEG 483
            G +P+  TY  LI  
Sbjct: 574 DGYEPDGCTYNTLIRA 589



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 215/436 (49%), Gaps = 20/436 (4%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +K +       +L     P V  +N L     +  Q +L   +  ++  +G + D+ T N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
           IMI   C R  +  AF    ++ +   +P  +T+  L+    LEG+  +A++L+D M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+C K  V +A   +  + + GCQP+  +Y  +L  +   G     
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L+ +M  R ++P+VVTY+I+I +LC+DG+ +DA+      + KG+  + ++Y+ LI +
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           +C  GR D   + L  MI+    P++V ++ ++ +  K G   +A +++ ++   G  PN
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPN 369

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +YN++   L +      A  M+  M+SKG +PD  TYN LI+  C+   VD+ + L  
Sbjct: 370 TITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR 429

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            M         ++Y+ +I GFC++R++  + +V   M  +G  P   TY +L++G+   G
Sbjct: 430 KMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG 489

Query: 489 WRAEAMELANALVSMH 504
              EA+ +   L  MH
Sbjct: 490 ELEEALGI---LDQMH 502



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 215/437 (49%), Gaps = 19/437 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +  E++  I  M+ANGC+P+      ++ +  +   +  A+ ++  +E    +P V  Y 
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK  +++ A      + ++G   +V TYN +IGS CS G  +   ++   ++  
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P V+T++ LI + + EG+  +A  L +EM                   +RG +P+ I
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEM------------------ITRGIEPNTI 371

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN L+  L N  + +E  ++M  M+S+G +P++ TY+ILI+  C+  + +D + + R  
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +G+  D  +Y  LI  +C+  +L +A +    M+S G  P I+ Y  +L   C NG  
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++AL I +++       ++  YN +   + ++     A  +   + SKG++ D  +YN +
Sbjct: 492 EEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIM 551

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +S LC+   + EA  L   M+   + P   +YN +I    +   I  S++++  M   G 
Sbjct: 552 LSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF 611

Query: 471 KPNETTYVLLIEGIGYG 487
             + +T  ++++ +  G
Sbjct: 612 SSDASTVKIVMDMLSSG 628



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 162/335 (48%), Gaps = 20/335 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G++D+    +  M+     P+VV  + LI    +E K  +A  +  E++ +  EP+   Y
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+LI G C   +++ AN+++D + S+G  PD+ TYNI+I   C    ++   ++F ++  
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
                  +TY+ LIQ                  G C+   +  A +  + + S+G  P +
Sbjct: 434 RGMIADTVTYSTLIQ------------------GFCQSRKLIVAKKVFQEMVSQGVHPGI 475

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y +LL  L + G+ EE   ++ +M    +E ++  Y+I+I  +C   K +DA  +  +
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              KG+  D  SY+ ++S  CK   L  A      M  DG  PD   YNT++ A  +  +
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
              ++++ E++   G   + S+   +   L SSG+
Sbjct: 596 ITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGE 629



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SY   LR+ L   K ++   L   M+     P V+ ++ L   L R  + +  + + +  
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           + KG+  D Y+ + +I+ +C+  +L  A   +  +   G  P+ V +NT+L   C  G  
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A+E+ + +      P++ + NT+ + L        A+ +I+ M++ G +P++ TY  +
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ +C+ G    A+ LL  ME  + +P V++Y III   CK  R+++++   + M  KG 
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296

Query: 471 KPNETTYVLLIEGI-GYGGW 489
           K N  TY  LI     +G W
Sbjct: 297 KANVFTYNSLIGSFCSFGRW 316



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 98/220 (44%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           D K +DAV + ++       P    ++ L     +  + DL +     M   G   D+  
Sbjct: 68  DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            N ++  FC+      A     K+  +G  PN  ++NT+ + L   G    A+ ++  M+
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
                PD IT N++++ LC    V EAV L+  M +   +P   +Y  I+   CK+    
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++++L  M  +  KP+  TY ++I+ +   G   +A+  
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSF 287



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 1/138 (0%)

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           +SSY     +      K  A+ +   ML     P  I +N L   L R    D  + L  
Sbjct: 55  MSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCK 114

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            ME       + + NI+I  FC+ R++  +   +  +F+ G +PN  T+  L+ G+   G
Sbjct: 115 QMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG 174

Query: 489 WRAEAMELANALV-SMHA 505
              EA+EL + +V S H 
Sbjct: 175 RVFEAVELVDCMVLSQHV 192


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 232/461 (50%), Gaps = 18/461 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKY 101
           LI+      + D++    + M   G  P V  C  ++  F +  ++ KA V   E+    
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +  V  +N +I+  CK  +++ A + +  + + G  P+VVTYN +I   CSRG +E A 
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD +     KP   TY   I     EG+ ++A  +L++M                 G 
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C KG +  AF +   +   G  P V +YNML+  L    K +E + ++ EM  +GL P+ 
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ILI+  CR G  + A  +      KG+ P   +Y  LI    K GR+  A +  + 
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G  PD++ +N ++   C NGN D+A  + +++  +   P+  ++NT+       G 
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I EM S+GI+PD I+YN+LIS   + G + +A  +  +M S  F PT+++YN 
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +I G CK    + + ++L  M  KG  PN+ TY+ LIEGIG
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 19/204 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+  ++    E +V  G  PD++M   LI         ++A  +++ ++
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    PD   +N L+ G C+  ++E A ++++ ++SRG  PD ++YN +I     RG ++
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF+V D++L     PT++TY  LIQ                  G+CK      A Q ++
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQ------------------GLCKNEEGDHAEQLLK 565

Query: 219 SLESRGCQPDVISYNMLLRTLLNM 242
            + S+G  P+  +Y  L+  + N+
Sbjct: 566 EMISKGITPNDNTYLSLIEGIGNV 589


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 245/487 (50%), Gaps = 33/487 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  +  L+F   M  NGC P+VV    +I  + + RK  +A +++ ++   G
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++ +YN +I+G C+  Q++  +++L+ +  R + PD VT+N +I   C+ G    A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  +++++   P V+TYT LI +    G  ++AM+ LD+M                 G 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            ++G + QA+Q ++ +   G  P +I+YN L+     +G+ E+   L+ EMI RG  P+V
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+YS +IS  CR+ + E A  +      KG++PD  +Y  LI   CK  RL    +    
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S G  PD V Y +++ A+C  G+ D+AL + +++   G  P++ +YN + +       
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLI-SC--------------LCRDGMVDEAVGLLVD 429
              A  ++ ++L +   P+EITYN+LI +C               C  G+++EA  +L  
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLES 628

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M    ++     YN+II G  K   I ++  +   M   G  P+  T + L + + + G 
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688

Query: 490 RAEAMEL 496
             E  +L
Sbjct: 689 EVELNQL 695



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 233/466 (50%), Gaps = 27/466 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM--EI 97
           F  ++K   R    +++L  +    + G  P V+    ++    + ++S K    +  E+
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +E    P+V+ YN LI GFC A  +E+       +   G  P+VVTYN +I + C    I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             AFK+   +      P +I+Y ++I     EGQ  +  ++L+EM               
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G C  G   QA      +   G  P+V++Y  L+ ++   G      + + +M  RGL
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN  TY+ LI    + G  + A  +++   E G TP   +Y+ LI+ +C  GR++ A  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  MI  G +PD+V+Y+TI++ FC+N   ++A ++  ++   G  P+V++Y+++   L 
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 381 SSGDKIRALG----MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
               K R LG    +  EMLS G+ PDE+TY SLI+  C +G +D+A+ L  +M    F 
Sbjct: 495 ----KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           P +++YN++I GF K  R  E+  +L  +  +   PNE TY  LI+
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 226/436 (51%), Gaps = 20/436 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELA 125
           CK    +   ++K   +    NKA+ ++ + + YG  P V +YNA++    +  Q +++A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +   +   G SP+V TYNI+I   C+ G +E     F ++ R+ C P V+TY  +I A
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                              CK   +G+AF+ +R +  +G  P++ISYN+++  L   G+ 
Sbjct: 248 ------------------YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  +++ EM  R   P+ VT++ LI+  C  G    A+ +     + GL+P+  +Y  L
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I++ CK G L+ A+EFLD M   G  P+   Y T++  F + G   QA +I +++ + G 
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P + +YN + +     G    A G++ EM+ +G  PD ++Y+++IS  CR+  +++A  
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L V+M +    P V +Y+ +I G CK RR+ E  ++   M   G  P+E TY  LI    
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 486 YGGWRAEAMELANALV 501
             G   +A+ L + ++
Sbjct: 530 IEGDLDKALRLHDEMI 545



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 208/396 (52%), Gaps = 19/396 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC-SRGMIESAFKVFDQL 167
           ++ ++    + N I  A  +++  +S GF P V++YN ++ ++  ++  ++ A  +F ++
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +     P V TY ILI+                  G C  G +     F   +E  GC P
Sbjct: 195 VESGVSPNVYTYNILIR------------------GFCTAGNLEMGLFFFGEMERNGCLP 236

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++YN ++     + K  E  KL+  M  +GL PN+++Y+++I+ LCR+G+ ++  ++L
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++   PD  +++ LI+ YC  G    A+     M+ +G  P++V Y T++ + CK 
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++A+E  +++ D G  PN  +Y T+       G   +A  ++ EM+  G  P  ITY
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI+  C  G +++A GLL +M    F P V+SY+ II GFC+ + + ++ ++   M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           KG  P+  TY  LI+G+       E  +L   ++S+
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 167/400 (41%), Gaps = 68/400 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    +AG  + ++ F++ M   G  P+    T LI  F Q+    +A ++M E++
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P +  YNALI+G C   ++E A+ +L  +  RGF PDVV+Y+ +I   C    +E
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++  +++     P V TY+ LIQ    + +  +   L  EM                
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C +G + +A +    +  +G  PD+++YN+L+       + +E ++L+ +++     
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585

Query: 262 PNVVTYSILISS---------------LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           PN +TY+ LI +                C  G   +A  VL +  +KG   +   Y+ +I
Sbjct: 586 PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVII 645

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVN----------------YNTIL--------- 341
             + K G ++ A      M+  G  P  V                  N +L         
Sbjct: 646 HGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI 705

Query: 342 --AAFCK--------NGNADQALEIFEKLSDVGCPPNVSS 371
             AA  K         GN D    + + ++  G  P  S+
Sbjct: 706 TEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSA 745


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 245/466 (52%), Gaps = 20/466 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           R+FR    +++L     MV     P +V   +L     + +     V + + +E  G   
Sbjct: 67  RTFR--NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISH 124

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV +   LI+ FC+   ++    VL ++   G  P+V+T++ +I   C  G I  A ++F
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF 184

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKK 207
           D ++    KP V +Y+I+I+     G+T + +KLL+ M                  +CK 
Sbjct: 185 DVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD 244

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            +V +A      ++  G  P V++Y  L+  L N+G+W+E   L+ EM    + P++V +
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S+LI  +C++G+  +A  +L+   E G+ PD  +Y+ L++ YC    +  A +  + MIS
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G +PD+ +++ ++  +CK    D+A ++F++++  G  P+  SYNT+ S L  +   + 
Sbjct: 365 KGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLE 424

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  +  +M S G  P+ +TY+ L+ CL + G +D+A+GL   ME++  +P +++YNI+I 
Sbjct: 425 AEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMID 484

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           G CK  +  ++ E+ A +  KG +PN       I+G+  GG   EA
Sbjct: 485 GMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 195/397 (49%), Gaps = 18/397 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +  L S   +    +    +  ++   G S DV++  I+I   C    ++  F V
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P VIT++ LI    +EG+  +A++L D M                   +R
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM------------------VAR 190

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P+V SY+++++ L  +GK  E  KL+  M   G EP+VV Y+ ++  LC+D    +A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V +    K  G+ P   +Y  LI      GR   A   L+ M     +PD+V ++ ++  
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G   +A  I + ++++G  P+V++YNT+ +      + + A  +   M+SKG  PD
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             +++ L++  C+   +DEA  L  +M      P  +SYN +I G C+ RR  E+ E+  
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M   G  PN  TY +L++ +   G+  +AM L  A+
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM 467



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 19/399 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK   ++   + MVA G KP+V   + +IK   +  K+ + ++++E ++
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EPDV  YN ++   CK   +  A  +  +++  G  P VVTY  +I  L + G  +
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF + +++   N  P ++ +++LI                    MCK+G V +A   ++
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDI------------------MCKEGEVSEARVILK 325

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G +PDV +YN L+       +  E  K+   MIS+G  P+V ++SIL++  C+  
Sbjct: 326 TMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAK 385

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +      +GL PD  SY+ LIS  C+  R   A E    M S+G  P++V Y+
Sbjct: 386 RIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYS 445

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L    K G  DQA+ +F  + + G  P++ +YN M   +   G    A  + +E+  K
Sbjct: 446 ILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK 505

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           G++P+       I  +C+ G++DEA      ME     P
Sbjct: 506 GLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 27/361 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +PN H  S          +IK   R GK  E +  +E M   GC+PDVV+   ++ +  +
Sbjct: 193 KPNVHSYSI---------IIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCK 243

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           +R  N+AV +   ++  G  P V  Y +LI G     + + A  +L+ ++     PD+V 
Sbjct: 244 DRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVA 303

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM- 202
           ++++I  +C  G +  A  +   +     +P V TY  L+    L  +  +A K+ + M 
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G CK   + +A Q    +  RG  PD +SYN L+  L    +  
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPL 423

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E E+L  +M S G  PN+VTYSIL+  L + G  + A+ + RA +  GL PD  +Y+ +I
Sbjct: 424 EAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMI 483

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK G+   A E    +   G  P+       +   CK G  D+A + F ++    C 
Sbjct: 484 DGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCS 543

Query: 367 P 367
           P
Sbjct: 544 P 544



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 3/273 (1%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SY    RT  N+    +       M++    P++V +  L S+L R    +  V + +  
Sbjct: 61  SYRHKNRTFRNI---NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQM 117

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D  S   LI+ +C+   +D     L  +I  G  P+++ ++T++  FC  G  
Sbjct: 118 EMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKI 177

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A+E+F+ +   G  PNV SY+ +   L   G     + ++  M   G EPD + YN++
Sbjct: 178 GRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  LC+D +V+EAV +   M+ T   PTV++Y  +I G     R  E+  +L  M     
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI 297

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            P+   + +LI+ +   G  +EA  +   +  M
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 242/474 (51%), Gaps = 23/474 (4%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
            R ++ +   D++E    +L K   R  K ++++     MV +   P +V   +L+    
Sbjct: 41  VRASSSVSGGDLRE----RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIV 96

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           + +K +  + + + +E  G   D++ +N +I+ FC   Q+ LA  +L ++   G+ PD V
Sbjct: 97  KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T   ++   C R  +  A  + D+++    KP ++ Y  +I +                 
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS----------------- 199

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK   V  AF F + +E +G +P+V++Y  L+  L N  +W +  +L+++MI + + P
Sbjct: 200 -LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+TYS L+ +  ++GK  +A ++        + PD  +Y  LI+  C   R+D A +  
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+S GCL D+V+YNT++  FCK    +  +++F ++S  G   N  +YNT+    + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD  +A    S+M   GI PD  TYN L+  LC +G +++A+ +  DM+       +++Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +I G CKT ++ E+  +  ++  KG KP+  TY  ++ G+   G   E   L
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 227/459 (49%), Gaps = 26/459 (5%)

Query: 19  SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKL 78
           S   ++RP   ++ F+       +L+    +  K+D  +   + M   G + D+     +
Sbjct: 74  SDMVKSRPFPSIVDFN-------RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I  F    + + A+ ++  + K G EPD     +L++GFC+ N++  A  ++D++   G+
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            PD+V YN +I SLC    +  AF  F ++ R   +P V+TYT L+              
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN------------- 233

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A + +  +  +   P+VI+Y+ LL   +  GK  E ++L  EM+ 
Sbjct: 234 -----GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
             ++P++VTYS LI+ LC   + ++A  +      KG   D  SY+ LI+ +CK  R++ 
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            ++    M   G + + V YNT++  F + G+ D+A E F ++   G  P++ +YN +  
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G+  +AL +  +M  + ++ D +TY ++I  +C+ G V+EA  L   +     +P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            +++Y  ++ G C    ++E   +   M ++G   N+ T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 135/268 (50%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L +T L   K  +   L ++M+     P++V ++ L+S++ +  K +  + + +  +  G
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +  D Y+++ +I+ +C   ++ LA+  L  M+  G  PD V   +++  FC+      A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +K+ ++G  P++ +YN +  +L  +     A     E+  KGI P+ +TY +L++ L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C      +A  LL DM   +  P VI+Y+ ++  F K  ++ E+ E+   M      P+ 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
            TY  LI G+       EA ++ + +VS
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVS 323



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 19/239 (7%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +S D     +  LI       + DE+    + MV+ GC  DVV    LI  F + ++   
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            +++   + + G   +   YN LI GF +A  ++ A +   ++   G SPD+ TYNI++G
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G +E A  +F+ + +      ++TYT +I+                  GMCK G 
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR------------------GMCKTGK 450

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           V +A+    SL  +G +PD+++Y  ++  L   G   E E L T+M   GL  N  T S
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD K  DA+D+     +    P    ++ L+SA  K  + D+ I     M   G   D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++  FC       AL I  K+  +G  P+  +  ++ +          A+ ++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G +PD + YN++I  LC+   V++A     ++E    RP V++Y  ++ G C + R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +++  +L+ M +K   PN  TY  L++     G   EA EL   +V M
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 242/481 (50%), Gaps = 32/481 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  V+ ++ MKL+          ES+Y    M A G KPDVV    L+K
Sbjct: 143 QADTVVYNHLLNVLVEGSK-MKLL----------ESVY--SEMGARGIKPDVVTFNTLMK 189

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +   G  PD   +  L+ GF +   IE A +V  R+   G S 
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     Q + D  +P  ITY   +                
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN--------------- 294

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C+   VG A + +  +   G  PDV +YN+++  L   G+ EE + ++ +M+ RG
Sbjct: 295 ---GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++ T++ LI++LC   + E+A+D+ R    KG++PD Y+++ LI+A CK G   LA+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M + GC PD V YNT++   C  G   +AL++ + +   GCP +  +YNT+   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M  +GI  + IT+N+LI  LC+D  +D+A GL+  M S   +P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN 531

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+YN I+  +CK   I ++ ++L  M   G + +  TY  LI G+   G    A+++   
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 500 L 500
           +
Sbjct: 592 M 592



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 222/439 (50%), Gaps = 19/439 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  L+K   RA +   ++  +E M + G  PD    T L++ F +E     A+RV   +L
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E          N LI+G+CK  ++E A   + +  + GF PD +TYN  +  LC    + 
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KV D ++++   P V TY I++                    +CK G + +A   + 
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNC------------------LCKNGQLEEAKGILN 345

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RGC PD+ ++N L+  L    + EE   L  ++  +G+ P+V T++ILI++LC+ G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A+ +    K  G TPD  +Y+ LI   C  G+L  A++ L  M S GC    + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI+   CK    ++A E+F+++   G   N  ++NT+   L        A G+I++M+S+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ ITYNS+++  C+ G + +A  +L  M +  F   V++Y  +I G CK  R   +
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 459 IEVLAAMFEKGCKPNETTY 477
           ++VL  M  KG +P    Y
Sbjct: 586 LKVLRGMRIKGMRPTPKAY 604



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 234/444 (52%), Gaps = 20/444 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD +     +    Q      A++VM+++ + G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +++  CK  Q+E A  +L+++  RG  PD+ T+N +I +LC+   +E A 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  Q+      P V T+ ILI A    G    A++L +EM                  +
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM------------------K 418

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC PD ++YN L+  L ++GK  +   L+ +M S G   + +TY+ +I  LC+  + E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++ +A +++ LI   CKD ++D A   ++ MIS+G  P+ + YN+IL
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KG+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
           P    YN ++  L R   + +A+ L  +M      P  ++Y I+  G C+    I E+ +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
            +  M +KG  P  +++ +L EG+
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 70/351 (19%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------------- 268
           +RG +PDV+++N L++ L    +      ++ EM SRG+ P+  T++             
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 269 ----------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY---- 302
                                 +LI+  C+ G+ EDA+  ++     G  PD  +Y    
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 303 ------------------------DPLISAY-------CKDGRLDLAIEFLDYMISDGCL 331
                                   DP +  Y       CK+G+L+ A   L+ M+  GCL
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDI  +NT++AA C     ++AL++  +++  G  P+V ++N + +AL   GD   AL +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM + G  PDE+TYN+LI  LC  G + +A+ LL DMEST    + I+YN II G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             RI E+ EV   M  +G   N  T+  LI+G+       +A  L N ++S
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMIS 524



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 40/322 (12%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V  Y  ++R L  +G  +  + L+ EM   G +  +      + S       +DAVD+
Sbjct: 74  PEV--YEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 287 LRAAKEK--GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +    +   G+  D   Y+ L++   +  ++ L       M + G  PD+V +NT++ A 
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD-------KIR---------- 387
           C+      A+ + E++S  G  P+ +++ T+       G        K R          
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 388 ------------------ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                             ALG I + ++ G EPD+ITYN+ ++ LC++  V  A+ ++  
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P V +YNI++   CK  ++ E+  +L  M ++GC P+ TT+  LI  +  G  
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 490 RAEAMELANALVSMHAISRDTF 511
             EA++LA   V++  +S D +
Sbjct: 372 LEEALDLARQ-VTVKGVSPDVY 392



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+V    +  LI    +AG+   +L  +  M   G +P       +++  F+      A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           + +   + + GE PD   Y  +  G C+    I+ A   +  +  +GF P+  ++ ++  
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 680

Query: 150 SLCSRGM 156
            L + GM
Sbjct: 681 GLLNLGM 687


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 243/500 (48%), Gaps = 56/500 (11%)

Query: 27  NTHLLSFDVKE--TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           N+ ++S  +K   T F  LIK   RA +   ++  +E M + G  PD    T L++ F +
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIE 258

Query: 85  ERKSNKAVRVMEILEKYGEPDV-FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           E   N A+R+ E +   G P      N L+ G+CK  +IE     +D + + GF PD  T
Sbjct: 259 EGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT 318

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           +N ++  LC  G ++ A ++ D +L++   P + TY  LI                   G
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI------------------FG 360

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G V +A + +  +  R   P+ ++YN L+ TL    + EE  +L   + S+G+ P+
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V T++ LI  LC       A+++    K KG  PD ++Y+ LI + C  GRL+ A+  L 
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLK 480

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M S GC  ++V YNT++  FCKN   ++A EIF+++   G   NV +YNT+   L  + 
Sbjct: 481 EMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNR 540

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  ++ +ML +G++PD+ TYNSL++  CR G + +A  ++  M S    P  ++Y 
Sbjct: 541 RVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYG 600

Query: 444 IIILGFCKT-----------------------------------RRINESIEVLAAMFEK 468
            +ILG  K                                    +R +E++ +   M EK
Sbjct: 601 TLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660

Query: 469 GCKPNETTYVLLIEGIGYGG 488
           G  P+  TY ++  G+  GG
Sbjct: 661 GDPPDAVTYKVVFRGLCSGG 680



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 254/482 (52%), Gaps = 19/482 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + +++++  + G F      ++ M   GC+        LI+ + +    ++AV V++I+E
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIME 167

Query: 100 K-YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           + +G + D F YN L++     N+++L   V  R+ SRG  PDV T+NI+I +LC    I
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + +++      P   T+T L+Q  + EG  + A+++ ++M               
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CK+G + +   F+  + + G +PD  ++N L+  L  +G  +   +++  M+  G 
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P++ TY+ LI  LC+ G+ E+AV++L     +  +P+  +Y+ LIS  CK+ +++ A E
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               + S G LPD+  +N+++   C   N   A+E+FE++   GC P+  +YN +  +L 
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           S G    AL ++ EM S G   + +TYN+LI   C++  ++EA  +  +ME       V+
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN +I G CK RR+ E+ +++  M  +G KP++ TY  L+      G   +A ++   +
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587

Query: 501 VS 502
            S
Sbjct: 588 TS 589



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 239/467 (51%), Gaps = 19/467 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  L++     G  + +L   E MVA GC    V    L+  + +E +  + +  ++
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +   G  PD F +N+L++G C+   ++ A ++LD +   GF PD+ TYN +I  LC  G
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +E A ++ +Q++  +  P  +TY  LI     E Q ++A +L   +             
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+C       A +    ++++GC PD  +YNML+ +L + G+ EE   L+ EM S 
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G   NVVTY+ LI   C++ + E+A ++    + +G++ +  +Y+ LI   CK+ R++ A
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            + +D M+ +G  PD   YN++L  FC+ G+  +A +I + ++  GC P+  +Y T+   
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G    A  ++  +  KG+     TYN +I  L R+    EAV L  +M      P 
Sbjct: 606 LSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPD 665

Query: 439 VISYNIIILGFCK-TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++Y ++  G C     I E+++ L  M +KG  P+ +++++L EG+
Sbjct: 666 AVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 246/488 (50%), Gaps = 25/488 (5%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAV 92
           +++   F+ LI+   +   FDE++  ++ M    G K D      L+       K  K V
Sbjct: 137 EIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKL-KLV 195

Query: 93  RVM--EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            ++   ++ +  +PDV  +N LI   C+A+QI  A  +++ + S G SPD  T+  ++  
Sbjct: 196 EIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQG 255

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
               G +  A ++ +Q++   C  + +T  +L+     EG+ ++ +  +DEM        
Sbjct: 256 FIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+C+ G V  A + +  +   G  PD+ +YN L+  L  +G+ EE  +++ 
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +MI R   PN VTY+ LIS+LC++ + E+A ++ R    KG+ PD  +++ LI   C   
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
              LA+E  + M + GC PD   YN ++ + C  G  ++AL + +++   GC  NV +YN
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+      +     A  +  EM  +GI  + +TYN+LI  LC++  V+EA  L+  M   
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME 555

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P   +YN ++  FC+   I ++ +++  M   GC+P+  TY  LI G+   G     
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAG----R 611

Query: 494 MELANALV 501
           +ELA+ L+
Sbjct: 612 VELASRLL 619



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 214/421 (50%), Gaps = 19/421 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ +E L FI+ M   G +PD      L+    +      A+ +++++ + G +PD+F
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF 352

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G CK  ++E A ++L+++  R FSP+ VTYN +I +LC    +E A ++   L
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P V T+  LIQ   L      AM+L +EM                  +C +G +
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   ++ +ES GC  +V++YN L+       + EE E++  EM  +G+  NVVTY+ L
Sbjct: 473 EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTL 532

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC++ + E+A  ++     +GL PD ++Y+ L++ +C+ G +  A + +  M S+GC
Sbjct: 533 IDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V Y T++    K G  + A  +   +   G      +YN +  AL+       A+ 
Sbjct: 593 EPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVR 652

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDG-MVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           +  EM+ KG  PD +TY  +   LC  G  + EAV  LV+M    F P   S+ ++  G 
Sbjct: 653 LFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712

Query: 450 C 450
           C
Sbjct: 713 C 713



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 189/375 (50%), Gaps = 21/375 (5%)

Query: 126 NKVLDRL----RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           + +LD L    +   F P  V Y  ++  L   G   S  +V  ++    C+    T+ I
Sbjct: 86  DSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLI 145

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI++       D+A+ ++D M                  E  G + D  +YN LL  L++
Sbjct: 146 LIESYAKFELFDEAVAVVDIME-----------------EEFGLKLDAFTYNFLLNVLVD 188

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             K +  E + + M+SRG++P+V T++ILI +LCR  +   A+ ++      GL+PD  +
Sbjct: 189 GNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKT 248

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           +  L+  + ++G ++ A+   + M++ GC    V  N ++  +CK G  ++ L   +++S
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS 308

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           + G  P+  ++N++ + L   G    AL ++  ML +G +PD  TYNSLI  LC+ G V+
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EAV +L  M    F P  ++YN +I   CK  ++ E+ E+   +  KG  P+  T+  LI
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 428

Query: 482 EGIGYGGWRAEAMEL 496
           +G+        AMEL
Sbjct: 429 QGLCLTNNHRLAMEL 443



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 54/382 (14%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD     +  LI    + G+ +E++  +  M+     P+ V    LI    +E +  +A 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  +L   G  PDV  +N+LI G C  N   LA ++ + ++++G  PD  TYN++I SL
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA-------------------------- 185
           CSRG +E A  +  ++    C   V+TY  LI                            
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526

Query: 186 ----TMLEG-----QTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRS 219
               T+++G     + ++A +L+D+M M                 C+ G + +A   V++
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           + S GC+PD ++Y  L+  L   G+ E   +L+  +  +G+     TY+ +I +L R+ +
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG-RLDLAIEFLDYMISDGCLPDIVNYN 338
           T +AV + R   EKG  PDA +Y  +    C  G  +  A++FL  M   G LPD  ++ 
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706

Query: 339 TILAAFCKNGNADQALEIFEKL 360
            +    C     D  +++  ++
Sbjct: 707 MLAEGLCALSMEDTLIKLVNRV 728



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 19/297 (6%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
           ++   E M   GC PD      LI       +  +A+ +++ +E  G   +V  YN LI 
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GFCK  +IE A ++ D +  +G S +VVTYN +I  LC    +E A ++ DQ+L +  KP
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
              TY  L+      G   KA  ++  M                 G+ K G V  A + +
Sbjct: 560 DKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLL 619

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R+++ +G      +YN +++ L    +  E  +L  EM+ +G  P+ VTY ++   LC  
Sbjct: 620 RTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSG 679

Query: 278 G-KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           G    +AVD L    +KG  PD  S+  L    C     D  I+ ++ ++      D
Sbjct: 680 GGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSD 736



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 118/312 (37%), Gaps = 71/312 (22%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ V Y  ++  L +DG       VL+  K  G      ++  LI +Y K    D A+  
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 322 LDY------------------------------------MISDGCLPDIVNYNTILAAFC 345
           +D                                     M+S G  PD+  +N ++ A C
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 346 K-----------------------------------NGNADQALEIFEKLSDVGCPPNVS 370
           +                                    GN + AL I E++   GCP +  
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           + N +       G     L  I EM ++G  PD  T+NSL++ LCR G V  A+ +L  M
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
               F P + +YN +I G CK   + E++E+L  M  +   PN  TY  LI  +      
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 491 AEAMELANALVS 502
            EA ELA  L S
Sbjct: 403 EEATELARVLTS 414


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 238/483 (49%), Gaps = 27/483 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI+   +  + +++L F+  MV+ G  PDV   T +I     E + ++A + +E + 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P+V  Y  LI G CK  +++ A  +L ++R +   P  VTYN +I  LC      
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERAS 132

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+ + ++++   C P + TYT LI       ++D A+++ +++                
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 203 -GMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            G+CK+G + +A   F R ++S  C P+ ++YN L+     MGK +E   L+  M   G 
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ L++  C+  + +DA D+L     KGLTPD  ++  L+   C++ RL  A+ 
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M    C P +  YNTIL  +C+    ++A +    L ++ CPPNV S+N M   L 
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLC 370

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTV 439
                  A+ ++ E   +   PD + Y ++I  LCR+  VDEA  +   M E     P  
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+Y+ +I G C    ++ +        EKGC PN  TY LLI+         +A EL + 
Sbjct: 431 ITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDD 486

Query: 500 LVS 502
           +V 
Sbjct: 487 MVQ 489



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 210/393 (53%), Gaps = 22/393 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   Y +LI G CK  ++E A   L ++ S+GF PDV TY  +I +LC    +  A K  
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           +++   N  P V+TYT+LI                   G+CK G V +A   +  +  + 
Sbjct: 70  EEMANRNLTPNVVTYTVLID------------------GLCKGGRVDEAVALLSKMRKK- 110

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P  ++YN L+  L    +  E   L+ EM+  G  P++ TY+ LI+  C+  K++DA+
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAA 343
            V      +G  PD  +Y  LI   CK+GRL  AI+    MI  G C+P+ V YN++++ 
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC+ G  D+A+ + E++++ G  P+V +Y T+ +          A  ++++M  KG+ PD
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+ SL+  LCR+  + +AV +L +M      PTV +YN I+ G+C+  ++ E+ + + 
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + E  C PN  ++ ++I G+      +EAMEL
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 173/316 (54%), Gaps = 20/316 (6%)

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           ++C    +TYT LIQ                  G+CK   + QA  F+  + S+G  PDV
Sbjct: 5   NSCSADFVTYTSLIQ------------------GLCKVKRLEQALIFLGKMVSKGFHPDV 46

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y  ++  L    +  E  K + EM +R L PNVVTY++LI  LC+ G+ ++AV +L  
Sbjct: 47  YTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK 106

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            ++K   P A +Y+ LIS  CK  R   A + L+ M+  GC+PDI  Y T++  FCK+  
Sbjct: 107 MRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-IEPDEITYN 408
           +D AL +FE+L   G  P+V +Y+ +   L   G    A+ +   M+  G   P+ +TYN
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLIS  CR G +DEA+ LL  M  T   P V++Y  ++ GFCK  R++++ ++L  M  K
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 469 GCKPNETTYVLLIEGI 484
           G  P+  T+  L++G+
Sbjct: 286 GLTPDVVTFTSLMDGL 301



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 59/432 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+ DE++  +  M    C P  V    LI    +  ++++A  ++E + 
Sbjct: 84  YTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+F Y  LI+GFCK+ + + A +V ++L +RGF PDVVTY+ +I  LC  G ++
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 159 SAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            A  +F ++++  +C P  +TY  LI      G+ D+AM LL+ M               
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA-------------- 248

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                 G  PDV++Y  L+     + + ++   L+ +M  +GL P+VVT++ L+  LCR+
Sbjct: 249 ----ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-------------DY 324
            +  DAV +L   + K  +P  Y+Y+ ++  YC+  +L+ A +F+             + 
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNI 364

Query: 325 MISD--------------------GCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDV 363
           MI                       C PD+V Y T++   C+    D+A  ++ K L + 
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC PN  +Y+T+ + L ++G   RA G I     KG  P+  TYN LI    +    ++A
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 424 VGLLVDMESTRF 435
             LL DM    F
Sbjct: 481 RELLDDMVQRGF 492



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           ++ C  D V Y +++   CK    +QAL    K+   G  P+V +Y  +  AL       
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A   + EM ++ + P+ +TY  LI  LC+ G VDEAV LL  M   +  PT ++YN +I
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLI 122

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G CK  R +E+ ++L  M   GC P+  TY  LI G        +A+ +   LV+
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 234/467 (50%), Gaps = 19/467 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VM 95
           ET F  +++     G  D +L   E MV  GC    V    LI  F ++ + ++A+  + 
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E + +   PD F YN L++G CK    + A +V+D +   G  PD+ TYN +I  LC  G
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            IE A K+ DQ++  +C P  +TY  +I +   E + D+A ++   +             
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+C       A      ++ +GC+PD  +YNML+ +L +  K EE   L+ EM   
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN 477

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G   NVV Y+ LI   C++ + E+A ++    + +G++ D+ +Y+ LI   CK  R++ A
Sbjct: 478 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            + +D MI +G  PD   YN++L  FCK G+  +A +I + ++  GC P++ +Y T+ S 
Sbjct: 538 AQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISG 597

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G    A  ++  +  KG+      YN +I  L +     EA+ L  +M      P 
Sbjct: 598 LCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPD 657

Query: 439 VISYNIIILGFCKTR-RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            I+Y I+  G C     I E+++    M E+G  P  +++V+L EG+
Sbjct: 658 AITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 282/575 (49%), Gaps = 69/575 (12%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +RV + A  +PN     F    + + +++++  +AG F+     +E M  +GC+ D  + 
Sbjct: 81  LRVFNWASKQPN-----FVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIF 135

Query: 76  TKLIKKFFQERKSNKAVRVMEILE-KYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
              ++ + +    ++ V +++++E +Y  +PD   YN L++    AN+++L       + 
Sbjct: 136 LIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMV 195

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            R    DV T+NI+I +LC    +  A  + +++      P   T+T ++Q  +  G  D
Sbjct: 196 RRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLD 255

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            A+++ ++M                 G CK+G + QA  F++   S G +PD  +YN L+
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L  +G  +   +++  M+  GL+P++ TY+ LIS LC+ G+ E+AV +L     +  +
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+A +Y+ +IS+ CK+ R+D A E    + S G LPD+  +N+++   C + N   A+++
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS----------------------- 393
           FE++   GC P+  +YN +  +L SS     AL ++                        
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495

Query: 394 ------------EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                       EM  +G+  D +TYN+LI  LC+   V++A  L+  M     RP   +
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA------ME 495
           YN ++  FCKT  I ++ +++  M   GC P+  TY  LI G+   G    A      ++
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615

Query: 496 LANALVSMHA---ISRDTFKRLNRTFPLLDVYKEI 527
           +   +++ HA   + +  FKR NRT   + +++E+
Sbjct: 616 MKGMVLTPHAYNPVIQALFKR-NRTHEAMRLFREM 649



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 217/446 (48%), Gaps = 19/446 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ D++L FI+  V+ G +PD      L+    +   +  A+ V++ +   G
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD++ YN+LISG CK  +IE A K+LD++ SR  SP+ VTYN +I SLC    ++ A 
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++   L      P V T+  LIQ   L      AM L +EM                  +
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C    + +A   ++ +E  GC  +V+ YN L+       + EE E++  EM  +G+  + 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI  LC+  + EDA  ++     +GL PD ++Y+ L++ +CK G +  A + +  
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M S GC PDIV Y T+++  CK G    A  +   +   G      +YN +  AL+    
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDG-MVDEAVGLLVDMESTRFRPTVISYN 443
              A+ +  EML K   PD ITY  +   LC  G  + EAV   V+M      P   S+ 
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698

Query: 444 IIILGFCKTRRINESIEVLAAMFEKG 469
           ++  G C     +  ++++  + EK 
Sbjct: 699 MLAEGLCTLSMDDTLVKLVDMIMEKA 724


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 242/474 (51%), Gaps = 23/474 (4%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
            R ++ +   D++E    +L K   R  K ++++     MV +   P +V   +L+    
Sbjct: 41  VRASSSVSGGDLRE----RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIV 96

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           + +K +  + + + +E  G   D++ +N +I+ FC   Q+ LA  +L ++   G+ PD V
Sbjct: 97  KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T   ++   C R  +  A  + D+++    KP ++ Y  +I +                 
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS----------------- 199

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK   V  AF F + +E +G +P+V++Y  L+  L N  +W +  +L+++MI + + P
Sbjct: 200 -LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+TYS L+ +  ++GK  +A ++        + PD  +Y  L++  C   R+D A +  
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+S GCL D+V+YNT++  FCK    +  +++F ++S  G   N  +YNT+    + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD  +A    S+M   GI PD  TYN L+  LC +G +++A+ +  DM+       +++Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +I G CKT ++ E+  +  ++  KG KP+  TY  ++ G+   G   E   L
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 227/459 (49%), Gaps = 26/459 (5%)

Query: 19  SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKL 78
           S   ++RP   ++ F+       +L+    +  K+D  +   + M   G + D+     +
Sbjct: 74  SDMVKSRPFPSIVDFN-------RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I  F    + + A+ ++  + K G EPD     +L++GFC+ N++  A  ++D++   G+
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            PD+V YN +I SLC    +  AF  F ++ R   +P V+TYT L+              
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN------------- 233

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A + +  +  +   P+VI+Y+ LL   +  GK  E ++L  EM+ 
Sbjct: 234 -----GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
             ++P++VTYS L++ LC   + ++A  +      KG   D  SY+ LI+ +CK  R++ 
Sbjct: 289 MSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            ++    M   G + + V YNT++  F + G+ D+A E F ++   G  P++ +YN +  
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G+  +AL +  +M  + ++ D +TY ++I  +C+ G V+EA  L   +     +P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            +++Y  ++ G C    ++E   +   M ++G   N+ T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 135/268 (50%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L +T L   K  +   L ++M+     P++V ++ L+S++ +  K +  + + +  +  G
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           +  D Y+++ +I+ +C   ++ LA+  L  M+  G  PD V   +++  FC+      A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +K+ ++G  P++ +YN +  +L  +     A     E+  KGI P+ +TY +L++ L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C      +A  LL DM   +  P VI+Y+ ++  F K  ++ E+ E+   M      P+ 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
            TY  L+ G+       EA ++ + +VS
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVS 323



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 19/218 (8%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE+    + MV+ GC  DVV    LI  F + ++    +++   + + G   +   YN
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI GF +A  ++ A +   ++   G SPD+ TYNI++G LC  G +E A  +F+ + + 
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                ++TYT +I+                  GMCK G V +A+    SL  +G +PD++
Sbjct: 430 EMDLDIVTYTTVIR------------------GMCKTGKVEEAWSLFCSLSLKGLKPDIV 471

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           +Y  ++  L   G   E E L T+M   GL  N  T S
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RD K  DA+D+     +    P    ++ L+SA  K  + D+ I     M   G   D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++  FC       AL I  K+  +G  P+  +  ++ +          A+ ++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G +PD + YN++I  LC+   V++A     ++E    RP V++Y  ++ G C + R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +++  +L+ M +K   PN  TY  L++     G   EA EL   +V M
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 241/469 (51%), Gaps = 18/469 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     ++     P +V   KL+    + +  +  + +   ++ +G  P
Sbjct: 39  KSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPP 98

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V+  N LI+ FC  N++  A  VL ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 99  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 158

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D+++ +  +P V+TY  LI      G T  A++LL  M                  +CK 
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 218

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             V +AF     +  +G  PD+ +Y  L+  L N+ +W+    L+ +M++  + P+VV +
Sbjct: 219 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++ +LC++GK  +A +++    ++G+ PD  +Y  L+  +C    +D A++  D M+ 
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD+++Y T++  +CK    D+A+ +FE++      P+  +YNT+   L   G    
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+++G  PD +TY+ L+  LC++  ++EA+ LL  +E++   P +  YNIII 
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G C+   +  + ++ + +  KG  P+  TY ++I G+   G   EA +L
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 232/477 (48%), Gaps = 35/477 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI+     GK  E+L+  + M+  G +P+VV    LI    +   ++ A+R++  
Sbjct: 136 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 195

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E+   +PDV  Y ++I   CK  Q+  A  +  ++  +G SPD+ TY  ++ +LC+   
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +    + +Q++     P V+ ++ ++ A                  +CK+G V +A + 
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDA------------------LCKEGKVTEAHEI 297

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  RG +PDV++Y  L+       + +E  K+   M+ +G  P+V++Y+ LI+  C+
Sbjct: 298 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 357

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             K + A+ +      K   PD  +Y+ L+   C  GRL  AI     M++ G +PD+V 
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+ +L + CKN + ++A+ + + +      P++  YN +   +  +G+   A  + S + 
Sbjct: 418 YSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 477

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           SKG+ P   TYN +I  LC+ G+++EA  L ++M+     P   +YN I  GF +     
Sbjct: 478 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 537

Query: 457 ESIEVLAAMFEKG-------------CKPNETTYVLLIEGIGYGGW---RAEAMELA 497
            +I++L  M  +G              + +   ++ + EG    GW   R +  ELA
Sbjct: 538 RAIQLLEEMLARGFSADSCFLMLSVLSEDDRRYFIFIPEGFDLLGWEFMRCKLKELA 594


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 240/477 (50%), Gaps = 20/477 (4%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQ-FMKLIKRSFRAGKFDESLYFIESMVANG 67
           NP  N R R    A T  N  +  F    T  F KL+    R G +  ++     + + G
Sbjct: 26  NPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG 85

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
             P +   T LI  +F +  +  A  ++  + K G +P++  +N +I+GFC    I  A 
Sbjct: 86  ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                L ++G+  D  TY  +I  L   G I++A  +  ++ + + +P ++ Y+ LI   
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID-- 203

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK G V  A      +  RG   D ++YN L+    ++G+W+
Sbjct: 204 ----------------GLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E  +L+T+M+   ++P+  T++ILI +LC++G+  +A  VL    ++G  PD  +Y+ L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             YC    +  A E  + M+  G  PD++NYN ++  +CK    D+A+ +F++L +    
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P ++SYN++   L +SG       ++ EM      PD +TYN LI  LC++G + EA+G+
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           LV M     +P +++YN ++ G+C    +N + ++   M + G +P+   Y +LI G
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 19/394 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PD + +N LI   CK  +I  A  VL  +  RG  PD+VTYN ++   CSR  +  A +
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F+++++   +P V+ Y +LI                   G CK  MV +A    + L +
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLID------------------GYCKTKMVDEAMVLFKELCN 363

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P + SYN L+  L N G+    +KL+ EM      P+VVTY+ILI +LC++G+  +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ VL    +KG+ P+  +Y+ ++  YC    +++A +  + M+  G  PDI+NYN ++ 
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK    D+A+ +F+++      P+++SYN++   L + G       ++ EM   G  P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITYN L+   C+    D+A+ L   +    + P   + + I+   CK  ++  + + L
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   GC PN  TY +LI  +   G   EAM L
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 21/449 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI      G++ E    +  MV     PD      LI    +E +  +A  V+ ++ 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K GE PD+  YNAL+ G+C    +  A ++ +R+  RG  PDV+ YN++I   C   M++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F +L   N  PT+ +Y  LI      G+     KLLDEM                
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G + +A   +  +  +G +P++++YN ++            + +   M+  GLE
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++ Y++LI+  C+    ++A+ + +  + K L PD  SY+ LI   C  GR+    E 
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M   G  PD++ YN +L AFCK    D+A+ +F ++ + G  P+  + + +   L  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL-C 590

Query: 382 SGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            G+K++ A   +  +L  G  P+  TY  LI+ LC+DG   EA+ LL  ME     P  I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++ III    +    +++ ++   M  +G
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 24/406 (5%)

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           N+ VRV      +  P    ++ L+    +      A  +  +L+S+G SP + T+ I+I
Sbjct: 44  NRMVRV------FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
                +     AF +   +L+   +P ++T+  +I                   G C  G
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN------------------GFCING 139

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M+ +A  F ++L ++G   D  +Y  L+  L   G+ +    L+ EM    ++PN+V YS
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LC+DG   DA+ +     E+G+  DA +Y+ LI   C  GR     + L  M+ +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PD   +N ++ A CK G   +A  +   +S  G  P++ +YN +     S  +   A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             + + M+ +G+EPD + YN LI   C+  MVDEA+ L  ++ +    PT+ SYN +I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            C + RI+   ++L  M      P+  TY +LI+ +   G   EA+
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 19/364 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAYNALI 113
           E+      MV  G +PDV+    LI  + + +  ++A V   E+  K   P + +YN+LI
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G C + +I    K+LD +      PDVVTYNI+I +LC  G I  A  V   +++   K
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P ++TY  ++    L    + A  + + M                 G CK  MV +A   
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +  +   PD+ SYN L+  L N+G+    ++L+ EM   G  P+V+TY+IL+ + C+
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A+ + R   E G+ PD Y+   ++   CK  +L +A + L +++  GC P++  
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++ A CK+G+  +A+ +  K+ D   PP+  ++  +   L    +  +A  +  EM+
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676

Query: 397 SKGI 400
           ++G+
Sbjct: 677 ARGL 680



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%)

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CR    +DAV            P    +D L+ A  + G    AI     + S G  P I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +  ++  +    +   A  +   +   G  PN+ ++NT+ +    +G   +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +L++G   D+ TY +LI+ L ++G +  A+ LL +ME +  +P ++ Y+ +I G CK   
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +++++ + + + E+G   +  TY  LI+G    G   E  +L   +V
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/101 (20%), Positives = 46/101 (45%)

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P    ++ L+  + R G    A+ L   ++S    P++ ++ I+I  +        +  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           LA + + G +PN  T+  +I G    G   +A++    L++
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 261/520 (50%), Gaps = 23/520 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           +DV ++ F   + + F++ +F ++ +F   +  +  K + +  +     F      + AV
Sbjct: 15  YDVPDSHF---VPKKFQSFQFLKNTHF-NFIPYSSSKINFISYSSTSTTFHSNNDVDDAV 70

Query: 93  RVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +   +L +   P  F +N ++    K+        +  ++  RG  P++V  NI+I   
Sbjct: 71  SLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCF 130

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G+I  AF VF ++L+    P  IT+T LI+   L+GQ  +A    D++         
Sbjct: 131 CQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQ 190

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK G    A   ++ ++    QP+V+ YN ++ ++  +    E   L +E
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MIS+G+ P+VVTYS LIS  C  GK  DA+D+      + + PD Y+++ L++A+CKDG+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +       D M+  G  P+ V YN+++  +C     ++A  IF  ++  G  P++ SY+ 
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           M +          A+ +  EM  K I PD +TY+SLI  L + G +  A+ L+  M    
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             PT+ +YN I+   CK  +++++I +L  + +KG +PN  TY +LI+G+   G   +A 
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490

Query: 495 ELANA-LVSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
           ++    LV  H ++ DT+  + + F +  ++ E   L +K
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 233/463 (50%), Gaps = 19/463 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    ++  +   LY  + M   G KP++V C  LI  F Q      A  V   +
Sbjct: 87  EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146

Query: 99  EKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G  PD   +  LI G C   QI+ A    D++ + GF  D ++Y  +I  LC  G  
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A  +  ++  +  +P V+ Y  +I +                  MCK  +V +AF   
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDS------------------MCKVKLVNEAFDLF 248

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+G  PDV++Y+ L+     +GK  +   L  +MI   ++P+V T++IL+++ C+D
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++   V     ++G+ P+  +Y+ L+  YC    ++ A    + M   G  PDI +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++  FCK    D+A+ +F+++      P+V +Y+++   L  SG    AL ++ +M  
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G+ P   TYNS++  LC+   VD+A+ LL  ++    +P + +Y+I+I G C++ ++ +
Sbjct: 429 RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLED 488

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +V   +  KG   N  TY ++I+G    G   EA+ L + +
Sbjct: 489 ARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 19/436 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK     G+  ++  F + +VA G   D +    LI    +  ++  A+ +++ ++
Sbjct: 158 FTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 100 -KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               +P+V  YN +I   CK   +  A  +   + S+G SPDVVTY+ +I   C  G + 
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++++ +N KP V T+ IL+ A                   CK G + +      
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNA------------------FCKDGKMKEGKTVFD 319

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G +P+ ++YN L+     + +  + + +   M   G+ P++ +YSI+I+  C+  
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A+++ +    K + PD  +Y  LI    K GR+  A++ +D M   G  P I  YN
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYN 439

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +IL A CK    D+A+ +  KL D G  PN+ +Y+ +   L  SG    A  +   +L K
Sbjct: 440 SILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G   +  TY  +I   C +G+ +EA+ LL  ME     P   +Y IIIL   K    + +
Sbjct: 500 GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559

Query: 459 IEVLAAMFEKGCKPNE 474
            ++L  M  +G +P +
Sbjct: 560 EKLLREMIARGVRPRQ 575



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 196/394 (49%), Gaps = 18/394 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F   +  +  LI    + G+   +L  ++ +  N  +P+VVM   +I    + +  N+
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E++ K   PDV  Y+ALISGFC   ++  A  + +++      PDV T+NI++ 
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           + C  G ++    VFD +++   KP  +TY  L+    L  + +KA  + + M       
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK     +A    + +  +   PDV++Y+ L+  L   G+     +L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M  RG+ P + TY+ ++ +LC+  + + A+ +L   K+KG+ P+ Y+Y  LI   C+ 
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+L+ A +  + ++  G   ++  Y  ++  FC  G  ++AL +  K+ D GC P+  +Y
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             +  +L+   +   A  ++ EM+++G+ P +I 
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 238/483 (49%), Gaps = 27/483 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI+   +  + +++L F+  MV+ G  PDV   T +I     E + ++A + +E + 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P+V  Y  LI G CK  +++ A  +L ++R +   P  VTYN +I  LC      
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERAS 132

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+ + ++++   C P + TYT LI       ++D A+++ +++                
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 203 -GMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            G+CK+G + +A   F R ++S  C P+ ++YN L+     MGK +E   L+  M   G 
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ L++  C+  + +DA D+L     KGLTPD  ++  L+   C++ RL  A+ 
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M    C P +  YNTIL  +C+    ++A +    L ++ CPPNV S+N M   L 
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLC 370

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTV 439
                  A+ ++ E   +   PD + Y ++I  LCR+  VDEA  +   M E     P  
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+Y+ ++ G C    ++ +        EKGC PN  TY LLI+         +A EL + 
Sbjct: 431 ITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDD 486

Query: 500 LVS 502
           +V 
Sbjct: 487 MVQ 489



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 210/393 (53%), Gaps = 22/393 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   Y +LI G CK  ++E A   L ++ S+GF PDV TY  +I +LC    +  A K  
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           +++   N  P V+TYT+LI                   G+CK G V +A   +  +  + 
Sbjct: 70  EEMANRNLTPNVVTYTVLID------------------GLCKGGRVDEAVALLSKMRKK- 110

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P  ++YN L+  L    +  E   L+ EM+  G  P++ TY+ LI+  C+  K++DA+
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAA 343
            V      +G  PD  +Y  LI   CK+GRL  AI+    MI  G C+P+ V YN++++ 
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC+ G  D+A+ + E++++ G  P+V +Y T+ +          A  ++++M  KG+ PD
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+ SL+  LCR+  + +AV +L +M      PTV +YN I+ G+C+  ++ E+ + + 
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + E  C PN  ++ ++I G+      +EAMEL
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 173/316 (54%), Gaps = 20/316 (6%)

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           ++C    +TYT LIQ                  G+CK   + QA  F+  + S+G  PDV
Sbjct: 5   NSCSADFVTYTSLIQ------------------GLCKVKRLEQALIFLGKMVSKGFHPDV 46

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y  ++  L    +  E  K + EM +R L PNVVTY++LI  LC+ G+ ++AV +L  
Sbjct: 47  YTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK 106

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            ++K   P A +Y+ LIS  CK  R   A + L+ M+  GC+PDI  Y T++  FCK+  
Sbjct: 107 MRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-IEPDEITYN 408
           +D AL +FE+L   G  P+V +Y+ +   L   G    A+ +   M+  G   P+ +TYN
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLIS  CR G +DEA+ LL  M  T   P V++Y  ++ GFCK  R++++ ++L  M  K
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 469 GCKPNETTYVLLIEGI 484
           G  P+  T+  L++G+
Sbjct: 286 GLTPDVVTFTSLMDGL 301



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 59/432 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+ DE++  +  M    C P  V    LI    +  ++++A  ++E + 
Sbjct: 84  YTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+F Y  LI+GFCK+ + + A +V ++L +RGF PDVVTY+ +I  LC  G ++
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 159 SAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            A  +F ++++  +C P  +TY  LI      G+ D+AM LL+ M               
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA-------------- 248

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                 G  PDV++Y  L+     + + ++   L+ +M  +GL P+VVT++ L+  LCR+
Sbjct: 249 ----ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-------------DY 324
            +  DAV +L   + K  +P  Y+Y+ ++  YC+  +L+ A +F+             + 
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNI 364

Query: 325 MISD--------------------GCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDV 363
           MI                       C PD+V Y T++   C+    D+A  ++ K L + 
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC PN  +Y+T+ + L ++G   RA G I     KG  P+  TYN LI    +    ++A
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 424 VGLLVDMESTRF 435
             LL DM    F
Sbjct: 481 RELLDDMVQRGF 492



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           ++ C  D V Y +++   CK    +QAL    K+   G  P+V +Y  +  AL       
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A   + EM ++ + P+ +TY  LI  LC+ G VDEAV LL  M   +  PT ++YN +I
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLI 122

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G CK  R +E+ ++L  M   GC P+  TY  LI G        +A+ +   LV+
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 246/490 (50%), Gaps = 20/490 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  DE+L   + M+  G  PD    T L+  F ++++S +A  + E +   G  P+ F
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI GF K   IE A ++ D + +RG   +VVTYN MIG +   G +  A  +F+++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    +P   TY +LI   +      KA +LL EM                 G+C    +
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G +P+V  Y  L++  +   ++E   +L+  MI+ G+ P++  Y+ L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR  K E+A  +L    EKG+ P+A++Y   I+ Y K G + +A  +   M+S G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+ V Y  ++   C  GN  +AL  F+ + + G  P++ +Y+ +  +L  +G    A+G
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII--LG 448
           +  + L  G+ PD   YNSLIS  C++G +++A  L  +M      P ++ YN +I   G
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           +CK+  + E+ ++   M  KG  P+   Y +LI+G G  G   +A+ L +        S 
Sbjct: 708 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 767

Query: 509 DTFKRLNRTF 518
             F  L  +F
Sbjct: 768 SAFNSLIDSF 777



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 228/504 (45%), Gaps = 55/504 (10%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQ 121
           SMV     PDV   T +IK   +     K   V+  +EK  +P++F YNA I G C+   
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGA 291

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A +V   +  +G  PD  TY +++   C +   + A  +F+ +      P   TYT 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI   + EG  ++A+++ DEM                 G+ K G + +A      +   G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +PD  +YN+L+   L      +  +L+ EM +R L P+  TYS+LIS LC     + A 
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +VL      G+ P+ + Y  LI AY ++ R ++AIE L  MI++G LPD+  YN ++   
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTM----------------FSALWSS------ 382
           C+    ++A  +   + + G  PN  +Y                   F  + SS      
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 383 -------------GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                        G+ + AL     ML KG+ PD   Y+++I  L ++G   EA+G+ + 
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY--G 487
              T   P V  YN +I GFCK   I ++ ++   M   G  PN   Y  LI   GY   
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 488 GWRAEAMELANALVSMHAISRDTF 511
           G   EA +L + ++S   IS D +
Sbjct: 712 GNLTEAFKLFDEMIS-KGISPDGY 734



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 255/565 (45%), Gaps = 90/565 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  +E+L   + M+  G K +VV    +I    +  +  KA+ +  E+L
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               EPD + YN LI G+ K++ +  A ++L  +++R  +P   TY+++I  LC    ++
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +V DQ++R+  KP V  Y  LI+A + E + + A++LL  M                
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C+   V +A   +  +  +G +P+  +Y   +      G+ +  E+   +M+S G+ 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD--AYS------------------ 301
           PN V Y+ILI   C  G T +A+   +   EKGL PD  AYS                  
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 302 ---------------YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA--AF 344
                          Y+ LIS +CK+G ++ A +  D M+ +G  P+IV YNT++    +
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 345 CKNGNADQALEIFEKLSDVGCPPN----------------------------------VS 370
           CK+GN  +A ++F+++   G  P+                                  +S
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 768

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N++  +    G  I A  +  +M+ K + P+ +TY  LI    +  M++EA  L +DM
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           E+    P  ++Y  ++L + +     + I +   M  +G   +   Y ++       G  
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 888

Query: 491 AEAMELAN-ALVSMHAISRDTFKRL 514
            EA++L N +LV    +  D F  L
Sbjct: 889 LEALKLLNKSLVEGIKLEDDVFDAL 913



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 230/483 (47%), Gaps = 27/483 (5%)

Query: 35  VKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA- 91
           VK   FM   LIK   +  +++ ++  ++ M+ANG  PD+     LI    + +K  +A 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           + ++++ EK  +P+   Y A I+ + K+ +I++A +    + S G  P+ V Y I+I   
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G    A   F  +L     P +  Y+ +I +    G+T +AM +  +          
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT--LLNMGKWEEGEKLM 252
                   G CK+G + +A Q    +   G  P+++ YN L+        G   E  KL 
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EMIS+G+ P+   Y ILI    ++G  E A+ +   A++K +   + +++ LI ++CK 
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKH 780

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G++  A E  D M+     P+IV Y  ++ A+ K    ++A ++F  +      PN  +Y
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD--M 430
            ++  +    G++ + + +  +M ++GI  D I Y  + S  C++G   EA+ LL    +
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           E  +    V  ++ +I   CK ++I+  +E+L+ M ++    +  T   L+ G    G  
Sbjct: 901 EGIKLEDDV--FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 958

Query: 491 AEA 493
            EA
Sbjct: 959 DEA 961



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 218/502 (43%), Gaps = 89/502 (17%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCK 118
           ++ M+ NG KP+V M   LIK + QE +   A+ +++I+   G  PD+F YN LI G C+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           A ++E A  +L  +  +G  P+  TY   I      G I+ A + F  +L     P  + 
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 179 YTILIQAT---------------MLE--------------------GQTDKAMKLLDEM- 202
           YTILI+                 MLE                    G+T +AM +  +  
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL--LNMGK 244
                           G CK+G + +A Q    +   G  P+++ YN L+        G 
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILIS-------------------------------- 272
             E  KL  EMIS+G+ P+   Y ILI                                 
Sbjct: 714 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 773

Query: 273 --SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
             S C+ GK  +A ++     +K LTP+  +Y  LI AY K   ++ A +    M +   
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+ + Y ++L ++ + GN  + + +F+ +   G   +  +Y  M SA    G  + AL 
Sbjct: 834 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 893

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++++ L +GI+ ++  +++LI  LC++  +   + LL +M       +  + N ++LGF 
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 953

Query: 451 KTRRINESIEVLAAMFEKGCKP 472
           K+   +E+ +VL  M   G  P
Sbjct: 954 KSGNEDEASKVLGVMQRLGWVP 975



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 18/418 (4%)

Query: 78  LIKKFFQERKSNKAV--RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           +++K  Q RK    +   ++    ++G  ++  ++  I  F     +  A+ V     S 
Sbjct: 142 MLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISE 201

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF P ++  N ++  L    M+   +KV+  ++     P V TYT +I+A    G   K 
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 196 MKLLDEM----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             +L EM                G+C+ G V +A +  + +  +G  PD  +Y +L+   
Sbjct: 262 KMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
               + +E + +   M S GL PN  TY+ LI    ++G  E+A+ +      +GL  + 
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I    K G +  A+   + M+  G  PD   YN ++  + K+ +  +A E+  +
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +      P+  +Y+ + S L  S D  +A  ++ +M+  G++P+   Y +LI    ++  
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            + A+ LL  M +    P +  YN +I+G C+ +++ E+  +L  M EKG KPN  TY
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 210/455 (46%), Gaps = 47/455 (10%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILE----KYGEPD-VFAYNALISGFCKANQIEL 124
           P++V C+ L     Q+ + + +VR+         K   P  + +Y+ L    C +  I  
Sbjct: 85  PEIV-CSVL-----QKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQ 138

Query: 125 ANKVLDRLRSRGFSP-----------------DVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A+ +L++L      P                 ++  ++I I      G +  A  VF   
Sbjct: 139 ADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIAS 198

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           + +   PT+I    L++                   + K  M+G  ++   S+      P
Sbjct: 199 ISEGFFPTLICCNNLMR------------------DLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV +Y  +++    +G   +G+ +++EM  +  +PN+ TY+  I  LC+ G  ++A++V 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +   EKGL PD ++Y  L+  +CK  R   A    + M S G  P+   Y  ++  F K 
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++AL I +++   G   NV +YN M   +  +G+  +A+ + +EML  GIEPD  TY
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI    +   + +A  LL +M++ +  P+  +Y+++I G C +  + ++ EVL  M  
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G KPN   Y  LI+          A+EL   +++
Sbjct: 480 NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 240/477 (50%), Gaps = 20/477 (4%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQ-FMKLIKRSFRAGKFDESLYFIESMVANG 67
           NP  N R R    A T  N  +  F    T  F KL+    R G +  ++     + + G
Sbjct: 26  NPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG 85

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
             P +   T LI  +F +  +  A  ++  + K G +P++  +N +I+GFC    I  A 
Sbjct: 86  ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                L ++G+  D  TY  +I  L   G I++A  +  ++ + + +P ++ Y+ LI   
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID-- 203

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK G V  A      +  RG   D ++YN L+    ++G+W+
Sbjct: 204 ----------------GLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E  +L+T+M+   ++P+  T++ILI +LC++G+  +A  VL    ++G  PD  +Y+ L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             YC    +  A E  + M+  G  PD++NYN ++  +CK    D+A+ +F++L +    
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P ++SYN++   L +SG       ++ EM      PD +TYN LI  LC++G + EA+G+
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           LV M     +P +++YN ++ G+C    +N + ++   M + G +P+   Y +LI G
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 19/394 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PD + +N LI   CK  +I  A  VL  +  RG  PD+VTYN ++   CSR  +  A +
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F+++++   +P V+ Y +LI                   G CK  MV +A    + L +
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLID------------------GYCKTKMVDEAMVLFKELCN 363

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P + SYN L+  L N G+    +KL+ EM      P+VVTY+ILI +LC++G+  +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ VL    +KG+ P+  +Y+ ++  YC    +++A +  + M+  G  PDI+NYN ++ 
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK    D+A+ +F+++      P+++SYN++   L + G       ++ EM   G  P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITYN L+   C+    D+A+ L   +    + P   + + I+   CK  ++  + + L
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   GC PN  TY +LI  +   G   EAM L
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLL 636



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 21/449 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI      G++ E    +  MV     PD      LI    +E +  +A  V+ ++ 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K GE PD+  YNAL+ G+C    +  A ++ +R+  RG  PDV+ YN++I   C   M++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F +L   N  PT+ +Y  LI      G+     KLLDEM                
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+G + +A   +  +  +G +P++++YN ++            + +   M+  GLE
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++ Y++LI+  C+    ++A+ + +  + K L PD  SY+ LI   C  GR+    E 
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M   G  PD++ YN +L AFCK    D+A+ +F ++ + G  P+  + + +   L  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL-C 590

Query: 382 SGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            G+K++ A   +  +L  G  P+  TY  LI+ LC+DG   EA+ LL  ME     P  I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++ III    +    +++ ++   M  +G
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 24/406 (5%)

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           N+ VRV      +  P    ++ L+    +      A  +  +L+S+G SP + T+ I+I
Sbjct: 44  NRMVRV------FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
                +     AF +   +L+   +P ++T+  +I                   G C  G
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN------------------GFCING 139

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M+ +A  F ++L ++G   D  +Y  L+  L   G+ +    L+ EM    ++PN+V YS
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  LC+DG   DA+ +     E+G+  DA +Y+ LI   C  GR     + L  M+ +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PD   +N ++ A CK G   +A  +   +S  G  P++ +YN +     S  +   A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             + + M+ +G+EPD + YN LI   C+  MVDEA+ L  ++ +    PT+ SYN +I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            C + RI+   ++L  M      P+  TY +LI+ +   G   EA+
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 19/364 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAYNALI 113
           E+      MV  G +PDV+    LI  + + +  ++A V   E+  K   P + +YN+LI
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G C + +I    K+LD +      PDVVTYNI+I +LC  G I  A  V   +++   K
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P ++TY  ++    L    + A  + + M                 G CK  MV +A   
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +  +   PD+ SYN L+  L N+G+    ++L+ EM   G  P+V+TY+IL+ + C+
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A+ + R   E G+ PD Y+   ++   CK  +L +A + L +++  GC P++  
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++ A CK+G+  +A+ +  K+ D   PP+  ++  +   L    +  +A  +  EM+
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676

Query: 397 SKGI 400
           ++G+
Sbjct: 677 ARGL 680



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%)

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CR    +DAV            P    +D L+ A  + G    AI     + S G  P I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +  ++  +    +   A  +   +   G  PN+ ++NT+ +    +G   +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +L++G   D+ TY +LI+ L ++G +  A+ LL +ME +  +P ++ Y+ +I G CK   
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +++++ + + + E+G   +  TY  LI+G    G   E  +L   +V
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/101 (20%), Positives = 46/101 (45%)

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P    ++ L+  + R G    A+ L   ++S    P++ ++ I+I  +        +  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           LA + + G +PN  T+  +I G    G   +A++    L++
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 238/447 (53%), Gaps = 23/447 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   +  M  +GC P+ ++   LI    +  + ++A++++E +   G  PDV  +N +
Sbjct: 227 DNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTV 286

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I GFC+ N++    K++DR+  +GF+P+ +TY  ++  LC    I+ A      LL    
Sbjct: 287 IYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA----QALLSKVP 342

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLL-DEM-----------------GMCKKGMVGQAF 214
            P V+ +  L+   +  G+ ++A   + D+M                 G+CKKG+ G A 
Sbjct: 343 GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSAL 402

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + V  ++++GC+P++ +Y +L+      G+ EE   ++ EM+++G   N V Y+ LIS+L
Sbjct: 403 ELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ GK  +A+D+      KG  PD ++++ LI   C+   ++ A+     M+ +G + + 
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V +NT++ AF + G   +AL++   +   GCP +  +YN +  AL  +G   + LG+  E
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ KG+ P  IT N LI+  C  G V  A+  + DM    F P +++YN +I G CK  R
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLI 481
           I E++ +   +  +G +P+  TY  LI
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 49/454 (10%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++L K   P+ + +  ++   C  N+++ A  +L  +   G  P+ + Y  +I +L  R 
Sbjct: 200 DMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRD 259

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++ A K+ +++    C P V T+  +I       +  +  KL+D M             
Sbjct: 260 RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYG 319

Query: 203 ----GMCK-------------------------------KGMVGQAFQFVR-SLESRGCQ 226
               G+CK                                G + +A  FV   + + G  
Sbjct: 320 YLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDV +++ L+  L   G +    +L+ +M ++G +PN+ TY+ILI   C+ G+ E+A  +
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           LR    KG + +   Y+ LISA CK G++  A++    M S GC PDI  +N+++   C+
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               + AL ++  +   G   N  ++NT+  A    G+   AL ++++ML +G   DEIT
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI  LC+ G V++ +GL  +M      P++I+ NI+I GFC   +++ ++E +  M 
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +G  P+  TY  LI G+   G   EA+ L   L
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 203/400 (50%), Gaps = 23/400 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP   +YN ++      N   +A+ V   + S+G SP+  T+ +++ +LC    +++A  
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +   + +  C P  + Y  LI A     + D+A+KLL+EM +                  
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFL------------------ 273

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC PDV ++N ++     + +  EG KL+  MI +G  PN +TY  L+  LC+  + ++
Sbjct: 274 MGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDE 333

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DYMISDGCLPDIVNYNTIL 341
           A    +A   K   P+   ++ L++ + ++GRL+ A  F+ D MI++G +PD+  ++T++
Sbjct: 334 A----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLV 389

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK G    ALE+   +   GC PN+++Y  +       G    A  ++ EML+KG  
Sbjct: 390 NGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFS 449

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            + + YN+LIS LC+ G + EA+ +  +M S   +P + ++N +I G C+   + +++ +
Sbjct: 450 LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALAL 509

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              M  +G   N  T+  LI      G   EA++L N ++
Sbjct: 510 YRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 54/378 (14%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
             F  L+    R G+ +E+  F+ + M+ NG  PDV   + L+    ++     A+ ++ 
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G +P++  Y  LI GFCK  Q+E A  +L  + ++GFS + V YN +I +LC  G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 156 MIESAFKVFDQLLRDNCKPTV-----------------------------------ITYT 180
            I  A  +F ++    CKP +                                   +T+ 
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            LI A +  G+  +A+KL+++M                  +CK G V +       +  +
Sbjct: 527 TLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P +I+ N+L+      GK     + M +MI RG  P++VTY+ LI+ LC+ G+ ++A
Sbjct: 587 GLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEA 646

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++    + +G+ PD+ +Y+ LI   C++G  D A   L   + +G +P+ V +N ++  
Sbjct: 647 LNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYN 706

Query: 344 FCKNGNADQALEIFEKLS 361
           F K  N++     + + S
Sbjct: 707 FGKQSNSEGQTITYAQFS 724



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 161/332 (48%), Gaps = 37/332 (11%)

Query: 206 KKGMVGQAFQFVRSLESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           + G+ GQA + +  L+ +G   C+P   SYN++L  L+          +  +M+S+G+ P
Sbjct: 151 RAGLPGQATRLL--LDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSP 208

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  T+ +++ +LC   + ++A  +LR   + G  P++  Y  LI A  K  R+D A++ L
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG---------------CP- 366
           + M   GC PD+  +NT++  FC+     +  ++ +++   G               C  
Sbjct: 269 EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKT 328

Query: 367 ---------------PNVSSYNTMFSALWSSGDKIRALGMI-SEMLSKGIEPDEITYNSL 410
                          PNV  +NT+ +    +G    A   +  +M++ G  PD  T+++L
Sbjct: 329 CRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTL 388

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC+ G+   A+ L+ DM++   +P + +Y I+I GFCK  ++ E+  +L  M  KG 
Sbjct: 389 VNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGF 448

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             N   Y  LI  +   G   EA+++   + S
Sbjct: 449 SLNTVGYNALISALCKHGKIHEALDMFGEMSS 480



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 43/103 (41%)

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           EP   +YN ++  L        A  +  DM S    P   ++ +++   C    ++ +  
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +L  M + GC PN   Y  LI+ +       EA++L   +  M
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLM 274


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 244/487 (50%), Gaps = 33/487 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  +  L F   M  NGC P+VV    +I  + + RK  +A +++ ++   G
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++ +YN +I+G C+  Q++  +++L+ +  R + PD VT+N +I   C+ G    A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  +++++   P V+TYT LI +    G  ++AM+ LD+M                 G 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            ++G + QA+Q ++ +   G  P +I+YN L+     +G+ E+   L+ EMI RG  P+V
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+YS +IS  CR+ + E A  +      KG++PD  +Y  LI   CK  RL    +    
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQE 508

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S G  PD V Y +++ A+C  G+ D+AL + +++   G  P++ +YN + +       
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLI-SC--------------LCRDGMVDEAVGLLVD 429
              A  ++ ++L +   P+EITYN+LI +C               C  G+++EA  +L  
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLES 628

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M    ++     YN+II G  K   I ++  +   M   G  P+  T + L + + + G 
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688

Query: 490 RAEAMEL 496
             E  +L
Sbjct: 689 EVELNQL 695



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 233/466 (50%), Gaps = 27/466 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM--EI 97
           F  ++K   R    +++L  +    + G  P V+    ++    + ++S K    +  E+
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +E    P+V+ YN LI GFC A  +E+       +   G  P+VVTYN +I + C    I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             AFK+   +      P +I+Y ++I     EGQ  +  ++L+EM               
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G C  G   QA      +   G  P+V++Y  L+ ++   G      + + +M  RGL
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN  TY+ LI    + G  + A  +++   E G TP   +Y+ LI+ +C  GR++ A  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  MI  G +PD+V+Y+TI++ FC+N   ++A ++  ++   G  P+V++Y+++   L 
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 381 SSGDKIRALG----MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
               K R LG    +  EMLS G+ PDE+TY SLI+  C +G +D+A+ L  +M    F 
Sbjct: 495 ----KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           P +++YN++I GF K  R  E+  +L  +  +   PNE TY  LI+
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 226/436 (51%), Gaps = 20/436 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELA 125
           CK    +   ++K   +    NKA+ ++ + + YG  P V +YNA++    +  Q +++A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +   +   G SP+V TYNI+I   C+ G +E     F ++ R+ C P V+TY  +I A
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                              CK   +G+AF+ +R +  +G  P++ISYN+++  L   G+ 
Sbjct: 248 ------------------YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  +++ EM  R   P+ VT++ LI+  C  G    A+ +     + GL+P+  +Y  L
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I++ CK G L+ A+EFLD M   G  P+   Y T++  F + G   QA +I +++ + G 
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P + +YN + +     G    A G++ EM+ +G  PD ++Y+++IS  CR+  +++A  
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L V+M +    P V +Y+ +I G CK RR+ E  ++   M   G  P+E TY  LI    
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 486 YGGWRAEAMELANALV 501
             G   +A+ L + ++
Sbjct: 530 IEGDLDKALRLHDEMI 545



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 208/396 (52%), Gaps = 19/396 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC-SRGMIESAFKVFDQL 167
           ++ ++    + N I  A  +++  +S GF P V++YN ++ ++  ++  ++ A  +F ++
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +     P V TY ILI+                  G C  G +     F   +E  GC P
Sbjct: 195 VESGVSPNVYTYNILIR------------------GFCTAGNLEMGLXFFGEMERNGCLP 236

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++YN ++     + K  E  KL+  M  +GL PN+++Y+++I+ LCR+G+ ++  ++L
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++   PD  +++ LI+ YC  G    A+     M+ +G  P++V Y T++ + CK 
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++A+E  +++ D G  PN  +Y T+       G   +A  ++ EM+  G  P  ITY
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI+  C  G +++A GLL +M    F P V+SY+ II GFC+ + + ++ ++   M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           KG  P+  TY  LI+G+       E  +L   ++S+
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 167/400 (41%), Gaps = 68/400 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    +AG  + ++ F++ M   G  P+    T LI  F Q+    +A ++M E++
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P +  YNALI+G C   ++E A+ +L  +  RGF PDVV+Y+ +I   C    +E
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++  +++     P V TY+ LIQ    + +  +   L  EM                
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C +G + +A +    +  +G  PD+++YN+L+       + +E ++L+ +++     
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585

Query: 262 PNVVTYSILISS---------------LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           PN +TY+ LI +                C  G   +A  VL +  +KG   +   Y+ +I
Sbjct: 586 PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVII 645

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVN----------------YNTIL--------- 341
             + K G ++ A      M+  G  P  V                  N +L         
Sbjct: 646 HGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI 705

Query: 342 --AAFCK--------NGNADQALEIFEKLSDVGCPPNVSS 371
             AA  K         GN D    + + ++  G  P  S+
Sbjct: 706 TEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSA 745


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 249/475 (52%), Gaps = 18/475 (3%)

Query: 37   ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            E  +  L+      G  DE++  +E M  + C P VV  T L+    +  + ++AV ++ 
Sbjct: 528  EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587

Query: 97   ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +EK G EP V  Y++L++ F K +Q E +  + D +  +G   DV TY+++I  LC   
Sbjct: 588  EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647

Query: 156  MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             ++ A  VF ++  +  +P +  Y  L+ + + + + D A+++ +E+             
Sbjct: 648  DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707

Query: 203  ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                G+ K   V +A + V S++++   PD+ +Y  LL  L   G+ EE   + T+M   
Sbjct: 708  IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767

Query: 259  GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            G EP+VV Y+ L+  L + GK   A+ + RA  +K   PD  +Y  LI +  K+GR++ A
Sbjct: 768  GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827

Query: 319  IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              F +  IS GC P++  Y++++ +F K G  D+ALE+FE++    CPPN+ +YN + S 
Sbjct: 828  YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887

Query: 379  LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
            L  +G    A  ++ EM   G  PD +TYN LI  + + GMVDEA      M+     P 
Sbjct: 888  LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947

Query: 439  VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            VI++  +I    K  ++ E+ E+  +M E+G  P+  TY +LI+ +G  G   EA
Sbjct: 948  VITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 249/510 (48%), Gaps = 20/510 (3%)

Query: 13  NERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV 72
           N   R+  +AE          D     F  LI    ++G  DE+  F   M    C P+V
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357

Query: 73  VMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
           V  T L+    +  +  +A  V +E+ E    PD  AYN LI G  KA + ++A  +   
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           ++ RG  P++ TYNIMI  L   G    A+++F  L      P V TY  LI      GQ
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477

Query: 192 TDKAMKLLDEM----GMC------KKGMVGQAFQFVRSLE--SRGCQP-DVISYNMLLRT 238
            DK + ++ EM    G C        G  G      R++E  S G +    I+YN L+  
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
            ++ G  +E  KL+  M      P VVTY+ L+  L + G+ ++AV +LR  +++G  P 
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  L++++ K  + + ++   D M+  GC+ D+  Y+ ++   CK+ + DQAL++F 
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + G  P + +Y T+ S+L        AL + +E+    + PD   YN +++ L +  
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            VDEA  L+  M++    P + +Y  ++ G  K+ R+ E+  +   M E+G +P+   Y 
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISR 508
            L++ +G GG      +L++AL+   A+++
Sbjct: 778 SLMDVLGKGG------KLSHALIIFRAMAK 801



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 225/455 (49%), Gaps = 18/455 (3%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
            +  L+    +AG+ DE++  +  M   GC+P VV  + L+  F++  +  +++ +  E++
Sbjct: 566  YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             K    DV  Y+ +I+  CK++ ++ A  V  R++  G  P +  Y  ++ SL     I+
Sbjct: 626  RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A ++F++L   +  P    Y I++   +   + D+A KL+D M                
Sbjct: 686  FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 203  -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             G+ K G + +AF     +   G +PDV++Y  L+  L   GK      +   M  +   
Sbjct: 746  DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            P+VVTYS LI SL ++G+ E+A      +  KG TP+   Y  LI ++ K G +D A+E 
Sbjct: 806  PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865

Query: 322  LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
             + M    C P+IV YN +L+   K G  + A ++ E++  VGC P++ +YN +   +  
Sbjct: 866  FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925

Query: 382  SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             G    A      M  KGI PD IT+ SLI  L +   + EA  L   ME   + P+V++
Sbjct: 926  MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985

Query: 442  YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            YN++I    +  +++E+  +   M  KGC P+  T
Sbjct: 986  YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 236/506 (46%), Gaps = 49/506 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    +AG+ +E+      M  N C PD +    LI    +  +++ A  + + ++
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P++  YN +IS   KA +   A ++   L+ +G  PDV TYN +I  L   G ++
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMD 479

Query: 159 SAFKVFDQLL---------RDNCK---------------PTV-------ITYTILIQATM 187
               +  +++         RD+                 P++       ITY  L+ A +
Sbjct: 480 KVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFI 539

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             G  D+A+KLL+ M                 G+ K G + +A   +R +E +GC+P V+
Sbjct: 540 HNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y+ L+ +     + EE   L  EM+ +G   +V TYS++I+ LC+    + A+DV    
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           KE+G+ P   +Y  L+S+  KD ++D A++  + +     +PD   YN ++    K+   
Sbjct: 660 KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+A ++ + + +    P++ +Y ++   L  SG    A  M ++M  +G EPD + Y SL
Sbjct: 720 DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  L + G +  A+ +   M   R  P V++Y+ +I    K  R+ E+         KGC
Sbjct: 780 MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
            PN   Y  LI+  G  G    A+EL
Sbjct: 840 TPNVGVYSSLIDSFGKKGMVDRALEL 865



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 198/393 (50%), Gaps = 19/393 (4%)

Query: 54   DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
            D++L     M   G +P +     L+    ++ K + A+++  E+ E    PD F YN +
Sbjct: 650  DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709

Query: 113  ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
            ++G  K+N+++ A K++D ++++   PD+ TY  ++  L   G +E AF +F ++  +  
Sbjct: 710  VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH 769

Query: 173  KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            +P V+ YT                 L+D +G  K G +  A    R++  + C PDV++Y
Sbjct: 770  EPDVVAYT----------------SLMDVLG--KGGKLSHALIIFRAMAKKRCVPDVVTY 811

Query: 233  NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
            + L+ +L   G+ EE        IS+G  PNV  YS LI S  + G  + A+++    + 
Sbjct: 812  SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 293  KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            +   P+  +Y+ L+S   K GRL++A + L+ M   GC+PD+V YN ++    K G  D+
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 353  ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
            A   F+++ + G  P+V ++ ++  +L      + A  +   M  +G  P  +TYN LI 
Sbjct: 932  AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991

Query: 413  CLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             L R G V EA  +  +M+     P  I+  I+
Sbjct: 992  ILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 234/506 (46%), Gaps = 56/506 (11%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKL-----IKRSFRA-GKFDESLYFIESMVANGCKP 70
           R++ + ET     +L+   KE   + +     + R+F +      +L     M + GC P
Sbjct: 191 RLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNP 250

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
              M   +++   +    + AV V   L ++  +PD   +   +  F ++ +++ A + +
Sbjct: 251 STNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPI 310

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +   G  P V T+ ++I +L   G I+ A K F+ +    C P V+TYT L+      
Sbjct: 311 QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN----- 365

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+ K G + +A +    ++   C PD I+YN L+  L   G+ +   
Sbjct: 366 -------------GLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            L  EM  RGL PN+ TY+I+IS L + G+  +A  +    KE+G  PD ++Y+ LI   
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 310 CKDGRLDLAIEFLDYMISDG--CL----------------------PDI-------VNYN 338
            K G++D  +  +  M+  G  C+                      P +       + YN
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++AF  NG+ D+A+++ E +    C P V +Y T+   L  +G    A+ ++ EM  +
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EP  +TY+SL++   +    +E++ L  +M        V +Y+++I   CK+  ++++
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++V   M E+G +P    Y  L+  +
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSL 678



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 197/444 (44%), Gaps = 48/444 (10%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y  +I     A + +   ++L  +   G    +     ++ +  S   +  A ++F+
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLE--- 221
           Q+    C P+   Y  +++  +  G    A+ +  ++G  +     Q F+ FV S     
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 222 -------------SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                          G  P V ++ +L+  L+  G  +E  K    M +    PNVVTY+
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L++ L + G+ E+A +V    KE   +PDA +Y+ LI    K G  D+A      M   
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G +P++  YN +++   K G   +A ++F  L + G  P+V +YNT+   L   G   + 
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 389 LGMISEMLSKGIE------------------------PD-------EITYNSLISCLCRD 417
           L +I EM+ KG E                        P        EITYN+L+S    +
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G VDEAV LL  M+     PTV++Y  ++ G  K  R++E++ +L  M ++GC+P+  TY
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601

Query: 478 VLLIEGIGYGGWRAEAMELANALV 501
             L+          E++ L + +V
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMV 625



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 21/320 (6%)

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM------------------- 209
           +D    TV TYT++I+      +TD  +++L    M K+G                    
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQIL--TAMWKEGHRISMHLLTSLLRTFGSTNN 232

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A +    ++S GC P    YN +L  L+  G +     +  ++    ++P+  T+ I
Sbjct: 233 VSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            + S  R G+ + A + ++   + G+ P  +++  LI A  K G +D A +F + M +  
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C P++V Y T++    K G  ++A E+F ++ +  C P+  +YNT+   L  +G+   A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           G+  EM  +G+ P+  TYN +IS L + G   EA  L  D++     P V +YN +I   
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 450 CKTRRINESIEVLAAMFEKG 469
            K  ++++ + ++  M EKG
Sbjct: 473 GKGGQMDKVLAIIKEMVEKG 492



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 24/221 (10%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  LI    + G+ +E+ YF E+ ++ GC P+V + + LI  F ++   ++A+ + E ++
Sbjct: 811  YSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQ 870

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +    P++  YN L+SG  KA ++ +A K+L+ +   G  PD+VTYNI+I  +   GM++
Sbjct: 871  RRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVD 930

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK---AMKLLDEMG------------ 203
             A   F ++      P VIT+T LI++    G+ DK   A +L D M             
Sbjct: 931  EAESYFKRMKEKGIVPDVITFTSLIESL---GKVDKLLEACELFDSMEEEGYNPSVVTYN 987

Query: 204  -----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
                 + + G V +A      ++ +GC PD I+  ++ R L
Sbjct: 988  VLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A ++ G +    +Y  +I         D  ++ L  M  +G    +    ++L  F    
Sbjct: 172 AGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTN 231

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   ALEIF ++   GC P+ + YN +   L   G    A+ +  ++    I+PD  T+ 
Sbjct: 232 NVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFR 291

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
             +    R G +D A   + +M  +   P V ++ ++I    K+  I+E+ +    M   
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C PN  TY  L+ G+   G   EA E+
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEV 379


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 233/452 (51%), Gaps = 19/452 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +       DE+L     M+     P  V   +L+    + +  +  + +   ++ +G  P
Sbjct: 19  KPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPP 78

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+    +I+  C  N+++ A   L ++   G  PD  T+  +I  LC  G I  A  +F
Sbjct: 79  DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 138

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D+++ +  +P V+TY  LI                   G+CK   V +AF     + ++G
Sbjct: 139 DKMIGEGFQPNVVTYGTLIN------------------GLCKDRQVTEAFNIFSEMITKG 180

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P++++YN L+  L  + +W+    LM EM+   + P+V T + ++ +LC++G   +A 
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           DV+     +G+ P+  +Y+ L+  +C    +D+A++  D M+   C+ ++++YNT++  +
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK  + D+A+ +FE++S     PN  +YNT+   L   G    A+ +  EM+++G  PD 
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY +L   LC++  +D+A+ LL  +E + + P +  Y  I+ G C+   + ++ ++ + 
Sbjct: 361 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 420

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +  KG +PN  TY ++I G+   G  AEA +L
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 213/460 (46%), Gaps = 18/460 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L+    +       L     M + G  PDV     +I       + + A   +  + 
Sbjct: 48  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +  LI G C   +I  A  + D++   GF P+VVTY  +I  LC    + 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF +F +++     P ++TY  LI       +      L++EM                
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+GMV +A   V  +  RG +P+V++YN L+       + +   K+   M+ +   
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            NV++Y+ LI+  C+    + A+ +      + LTP+  +Y+ LI   C  GRL  AI  
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M++ G +PD+V Y T+    CKN + D+A+ + + +      P++  Y T+   +  
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G+   A  + S + SKG++P+  TYN +I  LC+ G++ EA  L  +M      P   +
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           YN+I  GF +      +IE+L  M  +G   + +T  LL+
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 19/419 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           T F  LI+     GK  E+L+  + M+  G +P+VV    LI    ++R+  +A  +  E
Sbjct: 116 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSE 175

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ K   P++  YN+LI G CK  + +    +++ +      PDV T N ++ +LC  GM
Sbjct: 176 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 235

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  A  V D ++    +P V+TY  L+    L  + D A+K+ D M              
Sbjct: 236 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 295

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G CK   V +A      +  +   P+ ++YN L+  L ++G+ ++   L  EM++RG
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++VTY  L   LC++   + A+ +L+A +     PD   Y  ++   C+ G L+ A 
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    + S G  P++  YN ++   CK G   +A ++F +++  GC PN  +YN +    
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 475

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
             + + +R + ++ EML++G   D  T   L+  L  DG+ D++V  ++   S+  RP+
Sbjct: 476 LRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSVKQILCKPSSSSRPS 533



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 31/400 (7%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L  +  P    +  L++   K         +  ++ S G  PDV T NI+I S C    
Sbjct: 572 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 631

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  AF V  +LL+   +P V+TY  L+                   G+CK          
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMN------------------GLCK---------- 663

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              + ++G  PD+ +YN L+  L N+ +W+    L+ EM++  + PNVV +S ++ +LC+
Sbjct: 664 ---MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G    A DV+    ++G+ PD  +Y  L+  +C    +D A++  D M+  GC+P++ +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +C+    D+A+ + E++S  G   +  +YNT+   L   G    A+ +  EM+
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G  PD +TY  L+  LC++  + EA+ LL  +E +     ++ YNI I G C+   + 
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + ++ + +  KG +P+  TY ++I G+   G   EA +L
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 940



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 40/363 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    +   +   L     M + G  PDV     LI  F   R+   A  V+  L 
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643

Query: 100 KYG-----------------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           K G                        PD+F YN+LI   C   + +    +L+ + +  
Sbjct: 644 KLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 703

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+VV ++ ++ +LC  GMI  A  V D +++   +P V+TYT L+    L  + D+A+
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           K+ D M                 G C+   + +A   +  +  +G   D ++YN L+  L
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            ++G+ +    L  EM++ G  P++VTY IL+  LC++    +A+ +L+A +   L  D 
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 883

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
             Y+  I   C+ G L+ A +    + S G  PD+  YN ++   CK G  D+A ++F K
Sbjct: 884 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943

Query: 360 LSD 362
           + +
Sbjct: 944 MDE 946



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 123/253 (48%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S+N      L+    +E       M+ +   P+ V ++ L++S+ +       + + R  
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G+ PD Y+   +I++ C   R+D A   L  ++  G  PD   + T++   C  G  
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +AL +F+K+   G  PNV +Y T+ + L        A  + SEM++KGI P+ +TYNSL
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+         L+ +M  ++  P V + N ++   CK   + E+ +V+  M  +G 
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 471 KPNETTYVLLIEG 483
           +PN  TY  L++G
Sbjct: 252 EPNVVTYNALMDG 264



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 75/167 (44%)

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           ++NT  +        D+AL  F ++     PP+   +N + +++  +      L +  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S GI PD  T   +I+ LC    VD A   L  +     +P   ++  +I G C   +I
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E++ +   M  +G +PN  TY  LI G+       EA  + + +++
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMIT 178



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%)

Query: 366 PPNVSS-YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           PP +SS +NT  S          AL   + ML K   P  + +N L++ + +       +
Sbjct: 6   PPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 65

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L   M+S    P V +  I+I   C   R++ +   LA + + G +P+ TT+  LI G+
Sbjct: 66  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 125

Query: 485 GYGGWRAEAMELANALV 501
              G   EA+ L + ++
Sbjct: 126 CVEGKIGEALHLFDKMI 142


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 214/388 (55%), Gaps = 20/388 (5%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EPDV  Y+ +ISG CK  ++  A ++++ +  +G +PDV TY I++  LC  G ++
Sbjct: 3   EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F +++   C    + Y  LI                   G+CK   + +A++ + 
Sbjct: 63  EADELFHKMIERGCSANTVAYNALIN------------------GLCKDENIERAYKLLE 104

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S+G +PD I+YN +L  L  MGK  E ++    M SRG  P+VV Y+ L+ +L ++G
Sbjct: 105 EMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 164

Query: 279 KTEDAVDVLRAAK--EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           K  +A  + +     ++ + PD  +Y+ LI  +C+  + D A++    +I+ G +PD V 
Sbjct: 165 KVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN+IL    +  N D+A E+F+K+ D GC PN ++Y+ + S     G+  R L +  EM 
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            K   PD +  N++I  LC+   VD+A  +L +M      P V++YNI++ G CKT  ++
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++ E+ + M + GC P+  +Y +++ G+
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGL 372



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 239/490 (48%), Gaps = 20/490 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+     +  +I    + GK  E+L  +E M   G  PDV   T ++ +  +  K ++A
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 92  VRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             +   ++E+    +  AYNALI+G CK   IE A K+L+ + S+G+ PD +TYN ++  
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G +  A + FD +      P V+ Y  L+ A   EG+  +A  L   M        
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G C+     +A +  + + ++G  PD ++YN +L  L      +E E++
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             +M+  G  PN  TYSI++S  CR G     +++     EK  +PD    + +I   CK
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
             ++D A + L+ M   G +PD+V YN +L   CK    D+A E+F  + D GC P++ S
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y+ + + L  +     A  +   M+ + + PD +T+N L+  LC+ G +DEA  LL  M 
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                P  ++   ++ G C+ +R +E++ +   M EKG   +   + +++ G+   G  A
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484

Query: 492 EAMELANALV 501
           +A+    ++V
Sbjct: 485 QALLFFKSMV 494



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 22/443 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA---VRVMEILEKYGEPD 105
           R GK  E+  F +SM + G  PDVV    L+   ++E K  +A    + M++ ++   PD
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +  YN LI GFC+  + + A K+   + ++G+ PD VTYN ++  L  +  ++ A ++F 
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKG 208
           +++   C P   TY+I++      G   + ++L +EM                  +CK  
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V  A + +  +   G  PDV++YN+LL  L      ++  +L + M+  G  P++V+YS
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ++++ LC+  K  DA  +     E+ L PD  +++ L+   CK G+LD A + LD M   
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             LPD V   T++   C++   D+A+ +F+ + + G   +V  +N + + L   G   +A
Sbjct: 427 NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQA 486

Query: 389 LGMISEMLSKGIE--PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           L     M+    E  PD +TY +L++ L   G VD+AV     M  +   P  ++YN ++
Sbjct: 487 LLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLM 546

Query: 447 LGFCKTRRINESIEVLAAMFEKG 469
            G  K  R  ++  +  AM EKG
Sbjct: 547 NGLRKQGRHIQADRLTQAMKEKG 569



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 157/279 (56%), Gaps = 2/279 (0%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  +G +PDV++Y+ ++  L   GK  E  +++ EM  +G+ P+V TY+I++  LCR GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++A ++     E+G + +  +Y+ LI+  CKD  ++ A + L+ M S G  PD + YNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS--EMLS 397
           IL+  C+ G   +A + F+ +   G  P+V +YN +  AL+  G    A G+    +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + + PD ITYN+LI   CR    DEA+ L  D+ +  + P  ++YN I+LG  +   ++E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + E+   M + GC PN  TY +++ G    G  A  +EL
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 152/285 (53%), Gaps = 10/285 (3%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  +G EP+VVTYS +IS LC+ GK  +A++++    EKG+ PD  +Y  ++   C+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A E    MI  GC  + V YN ++   CK+ N ++A ++ E+++  G  P+  +YNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL--VDMES 432
           + S L   G    A      M S+G  PD + YN L+  L ++G V EA GL   +DM  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
            +  P +I+YN +I GFC+  + +E++++   +  KG  P+  TY  ++ G+       E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 493 AMELANALV--------SMHAISRDTFKRLNRTFPLLDVYKEISH 529
           A E+   +V        + ++I      R+      L++Y+E++ 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 20/272 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A K D++   +E M   G  PDVV    L+    +    +KA  +   +   G  PD+ 
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y+ +++G CK N++  A  + DR+  R   PDVVT+NI++  LC  G ++ A  + D +
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              N  P  +T T L+     + +TD+A++L   M                 G+C++G +
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483

Query: 211 GQAFQFVRSL-ESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            QA  F +S+ +S G   PDV++Y  L+  L+  G+ ++      +M   G  P+ V Y+
Sbjct: 484 AQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
            L++ L + G+   A  + +A KEKG   D +
Sbjct: 544 TLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 221/416 (53%), Gaps = 23/416 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD    N LI+ +C  N+++    VL  +  RG SP+ VT+  ++  LC    I  A  +
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------- 202
             +++R   +P V+TY  L+    + G T  A+KL +EM                     
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK G++ +  +    ++ RG  PDV++Y+ ++  + + G+WE  + L  EM+  G+
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVVT+++LI +LC+ GK E+A  +L+   ++G +PD ++Y+ LI  +C +GR+D A +
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M S G   D V+YN ++  +CK+G   +A +++ ++      P V +YNT+ + L+
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLF 424

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    A  +  EM    + P+  TYN L+  LC++  + EA+ L   +E+  F+P++ 
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +N +I G CK R+I  + E+   +  +G +PN  TY ++I G+   G    A +L
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 213/453 (47%), Gaps = 26/453 (5%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALIS 114
           SLY   S++  G  PD +    LI  +    K +  + V+ E+L +   P+   + +L+ 
Sbjct: 113 SLYKRMSLI--GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK 170

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN--- 171
           G C  ++I  A  +L ++   G+ P+VVTY  ++  LC  G    A K+ +++L  N   
Sbjct: 171 GLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGF 230

Query: 172 ---CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               KP ++ Y  +I +   +G  DK  +L  EM                 GMC  G   
Sbjct: 231 GVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWE 290

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A      +   G  P+V+++N+L+  L   GK EE   L+  MI RG  P+  TY+ LI
Sbjct: 291 GAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C +G+ +DA D+  + + KG+  DA SY+ LI+ YCK GR+  A +    M+    +
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P ++ YNT+L    + G    A  +F ++      P   +YN +   L  +     A+ +
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              + +   +P    +N LI  LC+   ++ A  L   +      P VI+Y ++I G CK
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           + ++  + ++   M EKGC PN  T+  L+ G 
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 218/454 (48%), Gaps = 24/454 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  L+K      +  E+   +  MV  G +P+VV    L+        +  AV++ E +L
Sbjct: 165 FTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEML 224

Query: 99  EKYG------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
              G      +P++  Y  +I   CK   I+   ++   ++ RG SPDVV Y+ +I  +C
Sbjct: 225 NGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMC 284

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E A  +F++++ +   P V+T+ +LI A    G+ ++A  LL  M          
Sbjct: 285 HTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF 344

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C +G +  A     S+ES+G + D +SYN+L+      G+  E +KL  EM
Sbjct: 345 TYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM 404

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + + + P V+TY+ L++ L R+GK  DA ++    K   LTP++ +Y+ L+   CK+  L
Sbjct: 405 MCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHL 464

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+E   Y+ +    P I  +N ++   CK    + A E+F +LS  G  PNV +Y  M
Sbjct: 465 SEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVM 524

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              L  SG    A  +   M  KG  P+ +T+N+L+   C++  + + V LL +M    F
Sbjct: 525 IHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
            P   + +I++    K  +  E + +L     +G
Sbjct: 585 SPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 191/403 (47%), Gaps = 24/403 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + ++N L+    K  +      +  R+   G +PD +T NI+I   C+   ++    V
Sbjct: 90  PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++LR    P  +T+T L++                  G+C    + +A   +R +   
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVK------------------GLCLGSRISEATGLLRKMVRM 191

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG------LEPNVVTYSILISSLCRD 277
           G +P+V++Y  LL  L   G      KL  EM++        ++PN+V Y  +I SLC+D
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G  +   ++    K +G++PD  +Y  +I   C  GR + A    + M+ +G  P++V +
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A CK G  ++A  + + +   G  P+  +YNT+       G    A  +   M S
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KGIE D ++YN LI+  C+ G + EA  L  +M      PTVI+YN ++ G  +  ++ +
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  +   M      P   TY +L++G+      +EAMEL + L
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL 474



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 11/314 (3%)

Query: 205 CKKGMV--GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK G +   +AF     L      P + S+N LL  +  + ++ +   L   M   GL P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + +T +ILI+  C   K +  + VL     +G +P+  ++  L+   C   R+  A   L
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD------VGCPPNVSSYNTMF 376
             M+  G  P++V Y T+L   C  GN   A+++ E++ +      V   PN+  Y T+ 
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            +L   G   +   +  EM  +GI PD + Y+S+I  +C  G  + A GL  +M      
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V+++N++I   CK  ++ E+  +L  M ++G  P+  TY  LI+G    G   +A +L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 497 ANALVSMHAISRDT 510
               VSM +   +T
Sbjct: 366 ---FVSMESKGIET 376



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 19/259 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    ++G+  E+      M+     P V+    L+   F+E K   A  +   ++ + 
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   YN L+ G CK N +  A ++   L +  F P +  +N +I  LC    IE A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++F++L  +  +P VITYT++I                   G+CK G +  A      +E
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIH------------------GLCKSGQLENAKDLFLGME 545

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +GC P+++++N L+R      + ++  +L+ EM  +   P+  T SI++  L +D K  
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYR 605

Query: 282 DAVDVLRAAKEKGLTPDAY 300
           + + +L     +G T   Y
Sbjct: 606 EYLHLLPTFPAQGQTGRGY 624



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 8/208 (3%)

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEF--LDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           PD    +  + + CK G +  +  F   +++I     P I ++NT+L A  K       +
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +++++S +G  P+  + N + +   +       L ++ EML +G  P+ +T+ SL+  L
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM------FEK 468
           C    + EA GLL  M    +RP V++Y  ++ G C T     ++++   M      F  
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             KPN   Y  +I+ +   G   +  EL
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKEL 260



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%)

Query: 332 PDIVNYNTILAAFCKNGNA--DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           PD       L + CK+G+    +A  +F  L D+   P +SS+NT+  A+         +
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   M   G+ PD IT N LI+C C    VD  + +L +M      P  +++  ++ G 
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           C   RI+E+  +L  M   G +PN  TY  L+ G+   G    A++L   +++
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 233/491 (47%), Gaps = 23/491 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    R G  +++L     +   GCKP V +   L+     E K      +  
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 97  ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++K G  P+VF YN L+   CK ++++ A+K+   + ++G  PD VTY  M+ SLC  G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            I+ A ++  +      KP+V  Y  LI     EG+ + A+KLL EM             
Sbjct: 229 KIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +C  G V  AF     +  RGC  ++ ++  L++     GK  E   L   MI  
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G EPNVV Y+ LI  LC +G  E+A+ V    +  G  P+  +Y  LI  + K G L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  + MIS GC P++V Y  ++   CKN   DQA  + EK++  GC PN  ++NT    
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G    A+ ++  M   G  P+  TYN L+  L R    +EA GL  ++E+   +P 
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN ++ GF +   + E++++      +G  P+  TY  +I      G    A +L  
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 499 ALVSMHAISRD 509
            + SM     D
Sbjct: 584 RVSSMKEWHPD 594



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 226/457 (49%), Gaps = 22/457 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +      M   GC PD V  T ++    +  K + A    E+  ++ 
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA---RELAGRF- 240

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P V  YNALI G CK  +IE+A K+L  +   G  P+VV+Y+ +I SLC  G +E AF 
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +F Q+    C   + T+T LI+   + G+  +A+ L   M                 G+C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G + +A Q    ++  GC P+V +Y++L+      G      +    MIS G  PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ ++  LC++   + A  ++     +G TP+  +++  I   C +GR++ A++ L+ M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GCLP+I  YN +L A  +    ++A  +F+++      PN+ +YNT+      +G  
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNI 444
             AL +  + L +G  PD ITYN++I   C+ G V  A  L+  + S + + P +I+Y  
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +I G C    I E++  L     +G  PN  T+  L+
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 189/368 (51%), Gaps = 20/368 (5%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     F  LIK  F  GK  E+L   + M+ +GC+P+VV    LI          +A++
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           V + +++ G  P+V  Y+ LI GF K+  +  A++  +R+ S G  P+VVTY  M+  LC
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
              M + A  + +++  + C P  +T+   I+     G+ + AMKLL+ M          
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM---------- 480

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
                   +  GC P++ +YN LL  L  M K+EE   L  E+ +R L+PN+VTY+ ++ 
Sbjct: 481 --------QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCL 331
              R G   +A+ +   A  +G  PD+ +Y+ +I AYCK G++ +A + ++ + S     
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDI+ Y +++   C   N ++A+   +K  + G  PN +++N +    + S   +  + +
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHI 652

Query: 392 ISEMLSKG 399
           + ++L KG
Sbjct: 653 LDDILRKG 660



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 189/433 (43%), Gaps = 82/433 (18%)

Query: 134 SRGFSPDVVTYNIMI---GSLCSRGMI--------------------------------E 158
           S  F     TY +MI   G  C   M+                                E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K+F ++    CKPTV  Y  L+ A + E +      L   M                
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE------------ 249
             +CK   V  A +    + ++GC PD ++Y  ++ +L   GK ++              
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV 246

Query: 250 ------------------KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
                             KL+ EM+  G++PNVV+YS +I+SLC  G  E A  +     
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            +G   + +++ PLI      G+L  A++    MI DGC P++V YNT++   C NG+ +
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL++ +++   GC PNV++Y+ +      SGD + A    + M+S G  P+ +TY  ++
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC++ M D+A  L+  M      P  +++N  I G C   R+  ++++L  M   GC 
Sbjct: 427 DVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCL 486

Query: 472 PNETTYVLLIEGI 484
           PN TTY  L++ +
Sbjct: 487 PNITTYNELLDAL 499



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 26/272 (9%)

Query: 250 KLMTEMISRGLEPNVVTYSI-----------------LISSLCRDGKTEDAVDVLRAAKE 292
           ++M E + R  E ++V Y +                 +I+   R G  E A+ +     E
Sbjct: 78  RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE 137

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  P    Y+ L+ A   + +  +       M  DG +P++  YN +L A CKN   D 
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSL 410
           A ++F ++S+ GCPP+  +Y TM S+L  +G  D  R        L+   +P    YN+L
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE-------LAGRFKPSVPVYNAL 250

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  +C++G ++ A+ LL +M      P V+SY+ II   C +  +  +  + A MF +GC
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             N  T+  LI+G    G   EA++L   ++ 
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 246/465 (52%), Gaps = 18/465 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KFD  +   E M        +     LI  F +  + + A+ ++  
Sbjct: 86  VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EP +   ++L++G+C   +I  A  ++D++   G+ PD +T+  +I  L     
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + D++++  C+P ++TY +++      G TD A+ LL++M              
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   V  A    + +E++G +P+V++Y+ L+  L + G+W +  +L+++MI + 
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+VT++ LI +  ++GK  +A  +     ++ + PD ++Y+ L++ +C   RLD A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  ++M+S  C PD+V YNT++  FCK+   +   E+F ++S  G   +  +Y T+   L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +  GD   A  +  +M+S G+ PD +TY+ L+  LC +G +++A+ +   M+ +  +  +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             Y  +I G CK  ++++  ++  ++  KG KPN  TY  +I G+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 202/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+P++V    ++    +   ++ A+ ++  +E
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               E DV  +N +I   CK   ++ A  +   + ++G  P+VVTY+ +I  LCS G   
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P ++T+  LI A + EG+  +A KL D+M                
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A Q    + S+ C PDV++YN L++      + E+G +L  EM  RGL 
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VTY+ LI  L  DG  ++A  V +     G+ PD  +Y  L+   C +G+L+ A+E 
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            DYM       DI  Y T++   CK G  D   ++F  LS  G  PNV +YNTM S L S
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 A  ++ +M   G  P+  TYN+LI    RDG    +  L+ +M S RF
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N L+S   K  + ++   + ++++       + TYNI+I   C R  I  A  +
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P+++T + L+                   G C    +  A   V  +   
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLN------------------GYCHGKRISDAVALVDQMVEM 184

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD I++  L+  L    K  E   L+  M+ RG +PN+VTY ++++ LC+ G T+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L   +   +  D   ++ +I + CK   +D A+     M + G  P++V Y+++++ 
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G    A ++   + +    PN+ ++N +  A    G  + A  +  +M+ + I+PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYNSL++  C    +D+A  +   M S    P V++YN +I GFCK++R+ +  E+  
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G+ + G    A ++   +VS
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 31/345 (8%)

Query: 2   STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           S+++SC+      S+    +S   E + N +L++F+        LI    + GKF E+  
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 351

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFC 117
             + M+     PD+     L+  F    + +KA ++ E ++ K   PDV  YN LI GFC
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K+ ++E   ++   +  RG   D VTY  +I  L   G  ++A KVF Q++ D   P ++
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY+IL+      G+ +KA+++ D M                 GMCK G V   +    SL
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G +P+V++YN ++  L +    +E   L+ +M   G  PN  TY+ LI +  RDG  
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
             + +++R  +      DA S   L++    DGRLD +  FLD +
Sbjct: 592 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 633



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 142/271 (52%), Gaps = 2/271 (0%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  +LR  L+  K ++   L   M+     P++V ++ L+S++ +  K +  + +    +
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
              +    Y+Y+ LI+ +C+  ++ LA+  L  M+  G  P IV  +++L  +C      
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A+ + +++ ++G  P+  ++ T+   L+       A+ ++  M+ +G +P+ +TY  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC+ G  D A+ LL  ME+ +    V+ +N II   CK R +++++ +   M  KG +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 472 PNETTYVLLIEGI-GYGGWRAEAMELANALV 501
           PN  TY  LI  +  YG W ++A +L + ++
Sbjct: 293 PNVVTYSSLISCLCSYGRW-SDASQLLSDMI 322



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G+   M+     P  + +N L+S + +    D  + L   M+       + +YNI+I 
Sbjct: 69  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  +I+ ++ +L  M + G +P+  T   L+ G  +G   ++A+ L + +V M
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 202/394 (51%), Gaps = 18/394 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P +  +N L+SG C   +I  A K+ D +   G  PDV+TY+ +I  LC  G    A +
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +  ++    CKP V+ Y  +I +                  +CK  +V +A  F   +  
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDS------------------LCKDRLVTEAMDFFSEMVK 108

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV +Y+ +L    N+G+  E   L  +M+ R + PN VT++ILI  LC+     +
Sbjct: 109 EGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISE 168

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  V     EKGL PD Y+Y+ L+  YC   ++D A +  + M   GC P++ +YN ++ 
Sbjct: 169 AWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILIN 228

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK+G  D+A  +  ++S     P++ +Y+T+       G    A  ++ EM S G+ P
Sbjct: 229 GHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP 288

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITY+ ++  LC+ G +DEA  LL  M+ ++  P +  Y I+I G C   ++  + E+ 
Sbjct: 289 NLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELF 348

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +F KG +P   TY ++I G+  GG   EA EL
Sbjct: 349 SNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 225/436 (51%), Gaps = 18/436 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M   G +P +V    L+     + K   AV++ + + K G EPDV  Y+ +I+G CK   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
             +A ++L ++  +G  P+VV YN +I SLC   ++  A   F +++++   P V TY+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           ++      G+ ++A  L  +M                 G+CKK M+ +A+    ++  +G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +PDV +YN L+    +  + +E +KL   M  +G  PNV +Y+ILI+  C+ G+ ++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L     K LTPD ++Y  L+  +C+ GR   A E L  M S G LP+++ Y+ +L   
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+G+ D+A E+ + + +    PN+  Y  +   + + G    A  + S +  KGI+P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY  +IS L + G+ +EA  L  +M      P   +YN+II GF +      ++ ++  
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 465 MFEKGCKPNETTYVLL 480
           M  KG   + +T+ +L
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 18/380 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G    +L  ++ M   GCKP+VV    +I    ++R   +A+     + K G  PDVF
Sbjct: 57  KMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVF 116

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y++++ GFC   ++  A  +  ++  R   P+ VT+ I+I  LC + MI  A+ VF+ +
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM 176

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P V TY  L+       Q D+A KL + M                 G CK G +
Sbjct: 177 TEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRI 236

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +   PD+ +Y+ L+R    +G+ +E ++L+ EM S GL PN++TYSI+
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC+ G  ++A ++L+A +E  + P+ + Y  LI   C  G+L+ A E    +   G 
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +V Y  +++   K G +++A E+F +++  GC PN  +YN +      +GD   A+ 
Sbjct: 357 QPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416

Query: 391 MISEMLSKGIEPDEITYNSL 410
           +I EM+ KG   D  T+  L
Sbjct: 417 LIEEMVGKGFSADSSTFRML 436



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 150/279 (53%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G QP ++++N LL  L +  K  +  KL  EM+  G EP+V+TYS +I+ LC+ G T  A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L+  +EKG  P+  +Y+ +I + CKD  +  A++F   M+ +G  PD+  Y++IL  
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G  ++A  +F+++ +    PN  ++  +   L        A  +   M  KG+EPD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYN+L+   C    +DEA  L   M+     P V SYNI+I G CK+ RI+E+  +LA
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  K   P+  TY  L+ G    G   EA EL   + S
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 141/266 (53%), Gaps = 3/266 (1%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M   GL+P +VT++ L+S LC   K  DAV +     + G  PD  +Y  +I+  CK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
             +A++ L  M   GC P++V YNTI+ + CK+    +A++ F ++   G PP+V +Y++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +     + G    A  +  +M+ + + P+++T+  LI  LC+  M+ EA  +   M    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V +YN ++ G+C   +++E+ ++   M  KGC PN  +Y +LI G    G   EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 495 ELANALVSMHAISRD--TFKRLNRTF 518
            L  A +S  +++ D  T+  L R F
Sbjct: 241 GLL-AEMSHKSLTPDIFTYSTLMRGF 265


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 230/458 (50%), Gaps = 19/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F K++        +   L   + M + G   DV     +I  F    + +    V+  + 
Sbjct: 77  FAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIF 136

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +  LI G C   +I  A  + D++   GF P+ VTY  +I  LC  G   
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++   +++ NC+P VITY  +I     + Q ++A+ +  EM                
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM---------------- 240

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              ++G  P+V +YN ++  L    +W+    LM EM+   + PNVV ++ L+ +LC++G
Sbjct: 241 --IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG 298

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A DV+    ++G+ PD  +Y  L+  +C    +D A +  D M+  GC P++++Y+
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS 358

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  +CK    D+A+ +FE++      PN+ +YNT+   L   G    A+ +  EM++ 
Sbjct: 359 TLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVAS 418

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY  L+  LC+   +D+A+ +L  +E +   P + SYNI+I G C+   +  +
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++ +++  KG  P+  TY ++I G+   G  AEA +L
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 225/463 (48%), Gaps = 19/463 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI+     GK  E+L+  + MV  G +P+ V    LI    +   S  A+R++  ++
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  EP+V  YN +I    K  Q+  A  +   + ++G SP+V TYN +I  LC     +
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + ++++     P V+ +T L+ A                  +CK+GMV  A   V 
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDA------------------LCKEGMVTIAHDVVD 308

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +PDV++Y  L+       + +E +K+   M+ +G  PNV++YS LI+  C+  
Sbjct: 309 VMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQ 368

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+ +     ++ L P+  +Y+ LI   C  GRL  AI     M++ G +PD+V Y 
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CK  + DQA+ + + +      P++ SYN +   +   G+   A  + S + SK
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ PD  TY  +I+ LC  G++ EA  L  +M +    P   +YN+I  GF +      +
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           I++L  M  +G   + +T  L++E +   G      ++ +  V
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G+ + +     S+ + G  PDV   T +I     +    +A ++   +   G  PD  
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  GF + N+   A ++L  +  RGFS D  T  +++  L   G+ +S  ++  + 
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEF 590

Query: 168 LR 169
           ++
Sbjct: 591 VQ 592


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 20/452 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN--QIELAN 126
           P VV+  KL+    +++  +  + + + ++     P+V+    LI+  C +N   +  A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
             L ++   G  P  VT+  ++  LCS+  I  A K+FD++ +    P++ITYT +I+  
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G T  A++LL +M                  +CK     +A  F   +  +G  P+V
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y+ +L    N+G+  E   L  +MI R + PN VT++IL+  LC++G   +A  V   
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E G+ PDAY+Y  L+  YC   ++D A +  D M+  G  P +  YN ++   CK+  
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A  +  ++ D    P+  +Y+T+      +G    A  +  EM S G+ PD ITY+ 
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+  LC+ G +DEA  LL  M+ ++  P +  YNI+I G C   ++  + E+ + +F KG
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +P+  TY ++I G+   G   EA E+   +V
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 18/390 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +IK   + G    +L  ++ M   GCKPDVV    +I    ++R++N+A+    E++
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   P+V  Y++++ GFC   Q+  A  +  ++  R   P+ VT+ I++  LC  GMI 
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VF+ +  +  +P   TY+ L+    L+ Q D+A KL D M                
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK   + +A   +  +  R   PD ++Y+ L++     G+ +  +KL  EM S GL 
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +TYSIL+  LC+ G  ++A  +L+A +E  + P    Y+ LI   C  G+L+ A E 
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              +   G  P +V Y  +++   K G +++A E+F K+   GC PN  +YN        
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLR 538

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +GD   A+ +I EM+ +G   D  T+  L+
Sbjct: 539 NGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 234/482 (48%), Gaps = 21/482 (4%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           + +++C+   + + V  + SA  +     L        F  L+       K  +++   +
Sbjct: 108 TILINCLCHSNRDHVHFAFSALGK--MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            +   G  P ++  T +IK   +   +  A+++++ +E+ G +PDV AYN +I   CK  
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +   A      +  +G  P+VVTY+ ++   C+ G +  A  +F Q++  N  P  +T+T
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           IL+                   G+CK+GM+ +A +    +   G +PD  +Y+ L+    
Sbjct: 286 ILVD------------------GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
              + +E +KL   M+ +G  P+V  Y+ILI+  C+  +  +A  +L    ++ LTPD  
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  L+  +C+ GR  +A +    M S G LPD + Y+ +L   CK+G+ D+A  + + +
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            +    P++  YN +   + + G    A  + S +  KGI+P  +TY  +IS L ++G+ 
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA  +   M      P   +YN+ I GF +    + ++ ++  M  +G   + +T+ +L
Sbjct: 508 NEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQML 567

Query: 481 IE 482
           ++
Sbjct: 568 LD 569



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 214/482 (44%), Gaps = 20/482 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK--AVRVMEI 97
           F KL+    +   +   +   + M  +  +P+V   T LI       + +   A   +  
Sbjct: 72  FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +P    +  L++G C   +I  A K+ D +   GF+P ++TY  +I  LC  G 
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
             +A ++  ++    CKP V+ Y  +I +   + + ++AM    EM              
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G C  G + +A    + +  R   P+ +++ +L+  L   G   E  ++   M   G
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+  TYS L+   C   + ++A  +      KG  P    Y+ LI+ +CK  RL+ A 
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M      PD V Y+T++  FC+ G    A ++F+++   G  P+  +Y+ +   L
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  ++  M    IEP    YN LI  +C  G ++ A  L  ++     +P+V
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y ++I G  K    NE+ E+   M   GC PN  TY + I+G    G  + A+ L   
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551

Query: 500 LV 501
           +V
Sbjct: 552 MV 553



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 180/364 (49%), Gaps = 16/364 (4%)

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P VV +N ++GSL  +    +   +  Q+   N +P V T TILI               
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINC------------- 113

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              +    +  V  AF  +  +   G QP  +++  LL  L +  K  +  KL  E+   
Sbjct: 114 ---LCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKM 170

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+++TY+ +I  LC+ G T +A+ +L+  +EKG  PD  +Y+ +I + CKD R + A
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           + F   M+  G  P++V Y++IL  FC  G  ++A  +F+++      PN  ++  +   
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G  + A  +   M   G+EPD  TY++L+   C    +DEA  L   M    F P+
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V  YNI+I G CK+RR+NE+  +L+ M+++   P+  TY  L++G    G    A +L  
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 499 ALVS 502
            + S
Sbjct: 411 EMCS 414



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 41/201 (20%)

Query: 342 AAFCKNGN----ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             FC N N       A+  F +L  +   P V  +N +  +L         + +  +M  
Sbjct: 38  GGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDL 97

Query: 398 KGIEPDEITYNSLISCLC---RDGM----------------------------------V 420
             I P+  T   LI+CLC   RD +                                  +
Sbjct: 98  SNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKI 157

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            +AV L  ++    F P++I+Y  II G CK      ++++L  M EKGCKP+   Y  +
Sbjct: 158 IDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTV 217

Query: 481 IEGIGYGGWRAEAMELANALV 501
           I+ +       EAM   + +V
Sbjct: 218 IDSLCKDRRANEAMYFFSEMV 238


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 233/491 (47%), Gaps = 23/491 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    R G  +++L     +   GCKP V +   L+     E K      +  
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 97  ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++K G  P+VF YN L+   CK ++++ A+K+   + ++G  PD VTY  M+ SLC  G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            I+ A ++  +      KP+V  Y  LI     EG+ + A+KLL EM             
Sbjct: 229 KIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +C  G V  AF     +  RGC  ++ ++  L++     GK  E   L   MI  
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G EPNVV Y+ LI  LC +G  E+A+ V    +  G  P+  +Y  LI  + K G L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  + MIS GC P++V Y  ++   CKN   DQA  + EK++  GC PN  ++NT    
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G    A+ ++  M   G  P+  TYN L+  L R    +EA GL  ++E+   +P 
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN ++ GF +   + E++++      +G  P+  TY  +I      G    A +L  
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 499 ALVSMHAISRD 509
            + SM     D
Sbjct: 584 RVSSMKEWHPD 594



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 226/457 (49%), Gaps = 22/457 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +      M   GC PD V  T ++    +  K + A    E+  ++ 
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA---RELAGRF- 240

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P V  YNALI G CK  +IE+A K+L  +   G  P+VV+Y+ +I SLC  G +E AF 
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +F Q+    C   + T+T LI+   + G+  +A+ L   M                 G+C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G + +A Q    ++  GC P+V +Y++L+      G      +    MIS G  PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ ++  LC++   + A  ++     +G TP+  +++  I   C +GR++ A++ L+ M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GCLP+I  YN +L A  +    ++A  +F+++      PN+ +YNT+      +G  
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNI 444
             AL +  + L +G  PD ITYN++I   C+ G V  A  L+  + S + + P +I+Y  
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +I G C    I E++  L     +G  PN  T+  L+
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 235/456 (51%), Gaps = 28/456 (6%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSN 89
           +F    + +  +I+R  R  + D   Y ++ M  +G  C  D+ +C  +I  + +   + 
Sbjct: 69  AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC--IINGYKRVGSAE 126

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +A+++   + ++G +P V  YN L+      N+ ++ N +   ++  G  P+V TYNI++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +LC    +++A K+F ++    C P  +TYT ++ +                  +CK G
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS------------------LCKAG 228

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            +  A    R L  R  +P V  YN L+  +   G+ E   KL+ EM+  G++PNVV+YS
Sbjct: 229 KIDDA----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I+SLC  G  E A  +      +G   + +++ PLI      G+L  A++    MI D
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC P++V YNT++   C NG+ ++AL++ +++   GC PNV++Y+ +      SGD + A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
               + M+S G  P+ +TY  ++  LC++ M D+A  L+  M      P  I++N  I G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            C   R+  ++++L  M   GC PN TTY  L++ +
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 189/368 (51%), Gaps = 20/368 (5%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     F  LIK  F  GK  E+L   + M+ +GC+P+VV    LI          +A++
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           V + +++ G  P+V  Y+ LI GF K+  +  A++  +R+ S G  P+VVTY  M+  LC
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
              M + A  + +++  + C P  IT+   I+     G+ + AMKLL+ M          
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM---------- 480

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
                   +  GC P++ +YN LL  L  M K+EE   L  E+ +R L+PN+VTY+ ++ 
Sbjct: 481 --------QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCL 331
              R G   +A+ +   A  +G  PD+ +Y+ +I AYCK G++ +A + ++ + S     
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDI+ Y +++   C   N ++A+   +K  + G  PN +++N +    + S   +  + +
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHI 652

Query: 392 ISEMLSKG 399
           + ++L KG
Sbjct: 653 LDDILRKG 660



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 26/272 (9%)

Query: 250 KLMTEMISRGLEPNVVTYSI-----------------LISSLCRDGKTEDAVDVLRAAKE 292
           ++M E + R  E ++V Y +                 +I+   R G  E A+ +     E
Sbjct: 78  RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE 137

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  P    Y+ L+ A   + +  +       M  DG +P++  YN +L A CKN   D 
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSL 410
           A ++F ++S+ GCPP+  +Y TM S+L  +G  D  R        L+   +P    YN+L
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE-------LAGRFKPSVPVYNAL 250

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  +C++G ++ A+ LL +M      P V+SY+ II   C +  +  +  + A MF +GC
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             N  T+  LI+G    G   EA++L   ++ 
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 246/465 (52%), Gaps = 18/465 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    +  KFD  +   E M        +     LI  F +  + + A+ ++  
Sbjct: 48  VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 107

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EP +   ++L++G+C   +I  A  ++D++   G+ PD +T+  +I  L     
Sbjct: 108 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A  + D++++  C+P ++TY +++      G TD A+ LL++M              
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   V  A    + +E++G +P+V++Y+ L+  L + G+W +  +L+++MI + 
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+VT++ LI +  ++GK  +A  +     ++ + PD ++Y+ L++ +C   RLD A 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  ++M+S  C PD+V YNT++  FCK+   +   E+F ++S  G   +  +Y T+   L
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +  GD   A  +  +M+S G+ PD +TY+ L+  LC +G +++A+ +   M+ +  +  +
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             Y  +I G CK  ++++  ++  ++  KG KPN  TY  +I G+
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 202/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+P++V    ++    +   ++ A+ ++  +E
Sbjct: 155 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 214

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               E DV  +N +I   CK   ++ A  +   + ++G  P+VVTY+ +I  LCS G   
Sbjct: 215 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 274

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P ++T+  LI A + EG+  +A KL D+M                
Sbjct: 275 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A Q    + S+ C PDV++YN L++      + E+G +L  EM  RGL 
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 394

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VTY+ LI  L  DG  ++A  V +     G+ PD  +Y  L+   C +G+L+ A+E 
Sbjct: 395 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 454

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            DYM       DI  Y T++   CK G  D   ++F  LS  G  PNV +YNTM S L S
Sbjct: 455 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 514

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 A  ++ +M   G  P+  TYN+LI    RDG    +  L+ +M S RF
Sbjct: 515 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 568



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N L+S   K  + ++   + ++++       + TYNI+I   C R  I  A  +
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P+++T + L+                   G C    +  A   V  +   
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLN------------------GYCHGKRISDAVALVDQMVEM 146

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD I++  L+  L    K  E   L+  M+ RG +PN+VTY ++++ LC+ G T+ A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L   +   +  D   ++ +I + CK   +D A+     M + G  P++V Y+++++ 
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G    A ++   + +    PN+ ++N +  A    G  + A  +  +M+ + I+PD
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYNSL++  C    +D+A  +   M S    P V++YN +I GFCK++R+ +  E+  
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 386

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G+ + G    A ++   +VS
Sbjct: 387 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 31/345 (8%)

Query: 2   STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           S+++SC+      S+    +S   E + N +L++F+        LI    + GKF E+  
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 313

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFC 117
             + M+     PD+     L+  F    + +KA ++ E ++ K   PDV  YN LI GFC
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K+ ++E   ++   +  RG   D VTY  +I  L   G  ++A KVF Q++ D   P ++
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY+IL+      G+ +KA+++ D M                 GMCK G V   +    SL
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G +P+V++YN ++  L +    +E   L+ +M   G  PN  TY+ LI +  RDG  
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
             + +++R  +      DA S   L++    DGRLD +  FLD +
Sbjct: 554 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 595



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 142/271 (52%), Gaps = 2/271 (0%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  +LR  L+  K ++   L   M+     P++V ++ L+S++ +  K +  + +    +
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
              +    Y+Y+ LI+ +C+  ++ LA+  L  M+  G  P IV  +++L  +C      
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A+ + +++ ++G  P+  ++ T+   L+       A+ ++  M+ +G +P+ +TY  ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC+ G  D A+ LL  ME+ +    V+ +N II   CK R +++++ +   M  KG +
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 472 PNETTYVLLIEGI-GYGGWRAEAMELANALV 501
           PN  TY  LI  +  YG W ++A +L + ++
Sbjct: 255 PNVVTYSSLISCLCSYGRW-SDASQLLSDMI 284



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G+   M+     P  + +N L+S + +    D  + L   M+       + +YNI+I 
Sbjct: 31  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  +I+ ++ +L  M + G +P+  T   L+ G  +G   ++A+ L + +V M
Sbjct: 91  CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 241/481 (50%), Gaps = 32/481 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  V+ ++ MKL+          ES+Y    M A G KPDVV    L+K
Sbjct: 51  QADTVVYNHLLNVLVEGSK-MKLL----------ESVY--SEMGARGIKPDVVTFNTLMK 97

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +   G  PD   +  L+ GF +   IE A +V  R+   G S 
Sbjct: 98  ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 157

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     Q + D  +P  ITY   +                
Sbjct: 158 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN--------------- 202

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C+   VG A + +  +   G  PDV +YN+++  L   G+ EE + ++ +M+ RG
Sbjct: 203 ---GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++ T++ LI++LC   + E+A+D+ R    KG++PD Y+++ LI+A CK G   LA+
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M + GC PD V YNT++   C  G   +AL++ + +   GCP +  +YNT+   L
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M  +GI  + IT+N+LI  LC+D  +D+A  L+  M S   +P  
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 439

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+YN I+  +CK   I ++ ++L  M   G + +  TY  LI G+   G    A+++   
Sbjct: 440 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 499

Query: 500 L 500
           +
Sbjct: 500 M 500



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 19/439 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  L+K   RA +   ++  +E M + G  PD    T L++ F +E     A+RV   +L
Sbjct: 92  FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 151

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E          N LI+G+CK  ++E A   + +  + GF PD +TYN  +  LC    + 
Sbjct: 152 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 211

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KV D ++++   P V TY I++                    +CK G + +A   + 
Sbjct: 212 HALKVMDVMVQEGHDPDVFTYNIVVNC------------------LCKNGQLEEAKGILN 253

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RGC PD+ ++N L+  L    + EE   L  ++  +G+ P+V T++ILI++LC+ G
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A+ +    K  G TPD  +Y+ LI   C  G+L  A++ L  M S GC    + YN
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI+   CK    ++A E+F+++   G   N  ++NT+   L        A  +I++M+S+
Sbjct: 374 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ ITYNS+++  C+ G + +A  +L  M +  F   V++Y  +I G CK  R   +
Sbjct: 434 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 493

Query: 459 IEVLAAMFEKGCKPNETTY 477
           ++VL  M  KG +P    Y
Sbjct: 494 LKVLRGMRIKGMRPTPKAY 512



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 235/444 (52%), Gaps = 20/444 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD +     +    Q      A++VM+++ + G
Sbjct: 165 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 224

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +++  CK  Q+E A  +L+++  RG  PD+ T+N +I +LC+   +E A 
Sbjct: 225 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 284

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  Q+      P V T+ ILI A    G    A++L +EM                  +
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM------------------K 326

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC PD ++YN L+  L ++GK  +   L+ +M S G   + +TY+ +I  LC+  + E
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++ +A +++ LI   CKD ++D A E ++ MIS+G  P+ + YN+IL
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KG+ 
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR-INESIE 460
           P    YN ++  L R   + +A+ L  +M      P  ++Y I+  G C+    I E+ +
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 566

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
            +  M +KG  P  +++ +L EG+
Sbjct: 567 FMLEMVDKGFIPEFSSFRMLAEGL 590



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 165/351 (47%), Gaps = 70/351 (19%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------------- 268
           +RG +PDV+++N L++ L    +      ++ EM SRG+ P+  T++             
Sbjct: 82  ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 141

Query: 269 ----------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
                                 +LI+  C+ G+ EDA+  ++     G  PD  +Y+  +
Sbjct: 142 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 201

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  C++  +  A++ +D M+ +G  PD+  YN ++   CKNG  ++A  I  ++ D GC 
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261

Query: 367 PNVSSYNTMFSALWSS-----------------------------------GDKIRALGM 391
           P+++++NT+ +AL +                                    GD   AL +
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM + G  PDE+TYN+LI  LC  G + +A+ LL DMEST    + I+YN II G CK
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             RI E+ EV   M  +G   N  T+  LI+G+       +A EL N ++S
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 38/268 (14%)

Query: 281 EDAVDVLRAAKEK--GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +DAVD++    +   G+  D   Y+ L++   +  ++ L       M + G  PD+V +N
Sbjct: 34  DDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 93

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD-------KIR---- 387
           T++ A C+      A+ + E++S  G  P+ +++ T+       G        K R    
Sbjct: 94  TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 153

Query: 388 ------------------------ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                                   ALG I + ++ G EPD+ITYN+ ++ LC++  V  A
Sbjct: 154 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + ++  M      P V +YNI++   CK  ++ E+  +L  M ++GC P+ TT+  LI  
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTF 511
           +  G    EA++LA   V++  +S D +
Sbjct: 274 LCTGNRLEEALDLARQ-VTVKGVSPDVY 300



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+V    +  LI    +AG+   +L  +  M   G +P       +++  F+      A
Sbjct: 469 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 528

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           + +   + + GE PD   Y  +  G C+    I+ A   +  +  +GF P+  ++ ++  
Sbjct: 529 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 588

Query: 150 SLCSRGM 156
            L + GM
Sbjct: 589 GLLNLGM 595


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 245/481 (50%), Gaps = 19/481 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  DE+L   + M+  G  PD    T L+  F ++++S +A  + E +   G  P+ F
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI GF K   IE A ++ D + +RG   +VVTYN MIG +   G +  A  +F+++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    +P   TY +LI   +      KA +LL EM                 G+C    +
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G +P+V  Y  L++  +   ++E   +L+  MI+ G+ P++  Y+ L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR  K E+A  +L    EKG+ P+A++Y   I+ Y K G + +A  +   M+S G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+ V Y  ++   C  GN  +AL  F+ + + G  P++ +Y+ +  +L  +G    A+G
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  + L  G+ PD   YNSLIS  C++G +++A  L  +M      P ++ YN +I G C
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   + ++ E+   + EK   P+  TY  +I+G    G   EA +L + ++S   IS D 
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS-KGISPDG 766

Query: 511 F 511
           +
Sbjct: 767 Y 767



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 220/487 (45%), Gaps = 52/487 (10%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQ 121
           SMV     PDV   T +IK   +     K   V+  +EK  +P++F YNA I G C+   
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGA 291

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A +V   +  +G  PD  TY +++   C +   + A  +F+ +      P   TYT 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI   + EG  ++A+++ DEM                 G+ K G + +A      +   G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +PD  +YN+L+   L      +  +L+ EM +R L P+  TYS+LIS LC     + A 
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +VL      G+ P+ + Y  LI AY ++ R ++AIE L  MI++G LPD+  YN ++   
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTM----------------FSALWSS------ 382
           C+    ++A  +   + + G  PN  +Y                   F  + SS      
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 383 -------------GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                        G+ + AL     ML KG+ PD   Y+++I  L ++G   EA+G+ + 
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
              T   P V  YN +I GFCK   I ++ ++   M   G  PN   Y  LI G+   G 
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE 711

Query: 490 RAEAMEL 496
             +A EL
Sbjct: 712 VTKAREL 718



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 226/476 (47%), Gaps = 24/476 (5%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCK 118
           ++ M+ NG KP+V M   LIK + QE +   A+ +++I+   G  PD+F YN LI G C+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           A ++E A  +L  +  +G  P+  TY   I      G I+ A + F  +L     P  + 
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 179 YTILIQATMLEGQTDKAM---KLLDEMGM--------------CKKGMVGQAFQFVRSLE 221
           YTILI+     G T +A+   K + E G+               K G   +A        
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  PDV  YN L+      G  E+  +L  EM+  G+ PN+V Y+ LI+ LC+ G+  
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A ++    +EK L PD  +Y  +I  YCK G L  A +  D MIS G  PD   Y  ++
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773

Query: 342 AAFCKNGNADQALEIFEKLSD--VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
               K GN ++AL +F +     VG   ++S++N++  +    G  I A  +  +M+ K 
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 830

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+ +TY  LI    +  M++EA  L +DME+    P  ++Y  ++L + +     + I
Sbjct: 831 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 890

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN-ALVSMHAISRDTFKRL 514
            +   M  +G   +   Y ++       G   EA++L N +LV    +  D F  L
Sbjct: 891 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDAL 946



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 213/431 (49%), Gaps = 20/431 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            LIK     G   E+L   + M+  G  PD+   + +I    +  K+ +A+ V     K G
Sbjct: 597  LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 103  E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              PDVF YN+LISGFCK   IE A+++ D +   G +P++V YN +I  LC  G +  A 
Sbjct: 657  VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            ++FD++   +  P V+TY+ +I                   G CK G + +AF+    + 
Sbjct: 717  ELFDEIEEKDLVPDVVTYSTIID------------------GYCKSGNLTEAFKLFDEMI 758

Query: 222  SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            S+G  PD   Y +L+      G  E+   L  E   + +  ++  ++ LI S C+ GK  
Sbjct: 759  SKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVI 817

Query: 282  DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            +A ++     +K LTP+  +Y  LI AY K   ++ A +    M +   +P+ + Y ++L
Sbjct: 818  EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 877

Query: 342  AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             ++ + GN  + + +F+ +   G   +  +Y  M SA    G  + AL ++++ L +GI+
Sbjct: 878  LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 937

Query: 402  PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
             ++  +++LI  LC++  +   + LL +M       +  + N ++LGF K+   +E+ +V
Sbjct: 938  LEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 997

Query: 462  LAAMFEKGCKP 472
            L  M   G  P
Sbjct: 998  LGVMQRLGWVP 1008



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 18/418 (4%)

Query: 78  LIKKFFQERKSNKAV--RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           +++K  Q RK    +   ++    ++G  ++  ++  I  F     +  A+ V     S 
Sbjct: 142 MLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISE 201

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF P ++  N ++  L    M+   +KV+  ++     P V TYT +I+A    G   K 
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 196 MKLLDEM----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             +L EM                G+C+ G V +A +  + +  +G  PD  +Y +L+   
Sbjct: 262 KMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
               + +E + +   M S GL PN  TY+ LI    ++G  E+A+ +      +GL  + 
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I    K G +  A+   + M+  G  PD   YN ++  + K+ +  +A E+  +
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +      P+  +Y+ + S L  S D  +A  ++ +M+  G++P+   Y +LI    ++  
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            + A+ LL  M +    P +  YN +I+G C+ +++ E+  +L  M EKG KPN  TY
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 36/414 (8%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSP-----------------DVVTYNIMI 148
           + +Y+ L    C +  I  A+ +L++L      P                 ++  ++I I
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFI 179

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
                 G +  A  VF   + +   PT+I    L++                   + K  
Sbjct: 180 DKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMR------------------DLLKAN 221

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M+G  ++   S+      PDV +Y  +++    +G   +G+ +++EM  +  +PN+ TY+
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYN 280

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
             I  LC+ G  ++A++V +   EKGL PD ++Y  L+  +CK  R   A    + M S 
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+   Y  ++  F K GN ++AL I +++   G   NV +YN M   +  +G+  +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + + +EML  G+EPD  TYN LI    +   + +A  LL +M++ +  P+  +Y+++I G
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            C +  + ++ EVL  M   G KPN   Y  LI+          A+EL   +++
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 240/478 (50%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K + +  F+  M   G  PDVV    LI  + ++    +A  +M+ +   G +P VF YN
Sbjct: 373 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 432

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A+I+G CK  +   A  VLD +   G SPD  TYNI++   C    +  A ++FD++   
Sbjct: 433 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 492

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +++++ LI      G  D+A+K   +M                 G C+ G++ +A
Sbjct: 493 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 552

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  +GC  DV++YN +L  L       E ++L TEM  RG+ P+  T++ LI+ 
Sbjct: 553 LKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             +DG    AV +     ++ L PD  +Y+ LI  +CK   ++   E  + MIS    P+
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y  ++  +C  G   +A  +++++ + G    + + NT+      +G+ ++A   +S
Sbjct: 673 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 732

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            ML KGI PD ITYN+LI+   ++  +D A  L+  ME++   P VI+YN+I+ GF +  
Sbjct: 733 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 792

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           R+ E+  ++  M E+G  P+ +TY  LI G        EA  + + ++    +  D F
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 229/464 (49%), Gaps = 20/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L++   +A K  E       + + G    +  C  L+    +    + A  + + + 
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +V+  N +I+  CK  +IE     L  +  +G  PDVVTYN +I + C +G++E
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF++ D +     KP V TY  +I      G+  +A  +LDEM   K GM         
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM--LKIGM--------- 459

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                   PD  +YN+LL          + E++  EM S+G+ P++V++S LI  L ++G
Sbjct: 460 -------SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + A+   R  K  GL PD   Y  LI  +C++G +  A++  D M+  GC  D+V YN
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TIL   CK     +A E+F ++++ G  P+  ++ T+ +     G+  +A+ +   M+ +
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            ++PD +TYN+LI   C+   +++   L  DM S R  P  ISY I+I G+C    ++E+
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 692

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME-LANALV 501
             +   M EKG +    T   +++G    G   +A E L+N L+
Sbjct: 693 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 736



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 60  IESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGF 116
           +ES+V     C  + ++   L++ + Q RK  +      +L+  G    + A N+L+ G 
Sbjct: 274 VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 333

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
            K   ++LA ++   +   G   +V T NIMI +LC    IE+       +      P V
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  LI A                   C++G++ +AF+ + S+  +G +P V +YN ++
Sbjct: 394 VTYNTLINA------------------YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 435

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L   GK+   + ++ EM+  G+ P+  TY+IL+   CR+    DA  +      +G+ 
Sbjct: 436 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 495

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  S+  LI    K+G LD A+++   M + G  PD V Y  ++  FC+NG   +AL++
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 555

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++ + GC  +V +YNT+ + L        A  + +EM  +G+ PD  T+ +LI+   +
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           DG +++AV L   M     +P V++YN +I GFCK   + +  E+   M  +   PN  +
Sbjct: 616 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675

Query: 477 YVLLIEGIGYGGWRAEAMELANALV 501
           Y +LI G    G  +EA  L + +V
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMV 700



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 18/453 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G  +E+   ++SM   G KP V     +I    +  K  +A  V++ + 
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 455

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN L+   C+ + +  A ++ D + S+G  PD+V+++ +IG L   G ++
Sbjct: 456 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 515

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K F  +      P  + YTILI      G   +A+K+ DEM                
Sbjct: 516 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+ M+ +A +    +  RG  PD  ++  L+      G   +   L   MI R L+
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+ LI   C+  + E   ++      + + P+  SY  LI+ YC  G +  A   
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M+  G    I+  NTI+  +C+ GNA +A E    +   G  P+  +YNT+ +    
Sbjct: 696 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 755

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             +  RA  ++++M + G+ PD ITYN +++   R G + EA  +++ M      P   +
Sbjct: 756 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 815

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           Y  +I G      + E+  V   M ++G  P++
Sbjct: 816 YTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 208/423 (49%), Gaps = 26/423 (6%)

Query: 86  RKSNKAVRVMEILEK----YGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           RKS   V  +EI+E     YG    +   ++ L+  + +A ++    +    L+S+G   
Sbjct: 264 RKS--GVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 321

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
            +   N ++G L   G ++ A++++ +++R   +  V T  I+I A              
Sbjct: 322 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA-------------- 367

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   +     F+  +E +G  PDV++YN L+      G  EE  +LM  M  +G
Sbjct: 368 ----LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+P V TY+ +I+ LC+ GK   A  VL    + G++PD  +Y+ L+   C++  +  A 
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              D M S G +PD+V+++ ++    KNG  DQAL+ F  + + G  P+   Y  +    
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +G    AL +  EML +G   D +TYN++++ LC++ M+ EA  L  +M      P  
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            ++  +I G+ K   +N+++ +   M ++  KP+  TY  LI+G   G    +  EL N 
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 500 LVS 502
           ++S
Sbjct: 664 MIS 666


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 254/514 (49%), Gaps = 45/514 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    +A + DE+    + M  +GC  DV+    L+K   + R+  +A R +E++ 
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMR 372

Query: 100 KYG--EPDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGM 156
           +     P+V  ++ LI G C A ++  A +V +R+ +  G SP+  TY  ++  LC  G 
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 157 IESAFKVFDQLLRDN---------------------CKPTVITYTILIQATMLEGQTDKA 195
                + F+Q+L                        C+PT++TY  L+      G    A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLR 237
           + LL+ M                 G+CK+  +  A   F R+LE RGC+P+V++Y+ L+ 
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE-RGCRPNVVTYSTLID 551

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L  M K +E  +L+ +M+  G   N VTYS ++  L + G+ EDAV VLR  ++ G  P
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           DA +Y+ LI  + K  RL  A+  L  M+  G  P +V Y T+    C++G  D+A+EI 
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCLCR 416
           + ++  GC PN  +Y+++   L  +G    ALG   +M   + + P  I Y++LI  LC+
Sbjct: 672 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 731

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +DEA   L  M      P V++++I+I G C   RI+  +E+   M E+GCK +   
Sbjct: 732 AGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYA 791

Query: 477 YVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           Y  +I      G  + A  L   + + H I+++T
Sbjct: 792 YNAMINAYCLKGEFSAAYALLEEMKT-HGIAKNT 824



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 234/472 (49%), Gaps = 24/472 (5%)

Query: 48   FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
             + G+ ++++  +  M   GC PD V    LI  FF+ ++  +AV ++ E+LE    P V
Sbjct: 589  LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
              Y  L  G C++ + + A ++LD + +RG +P+ +TY+ ++  LC  G +  A   F++
Sbjct: 649  VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708

Query: 167  LLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            + RD    P VI Y+ LI      G+ D+A + L+ M                 G+C  G
Sbjct: 709  MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 209  MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
             +    +    +  RGC+ D+ +YN ++      G++     L+ EM + G+  N VT+ 
Sbjct: 769  RIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828

Query: 269  ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            I+I +LC + + ++AV    +  E     D  SY+ LI++     R + A+E L  M++D
Sbjct: 829  IVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVAD 886

Query: 329  GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            G  PD  NY T++    K G+ + A ++ +++   G  P++ +Y  M S L  +     A
Sbjct: 887  GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946

Query: 389  LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                 EML K ++PD I Y+SLI   C+   VD+A  LL    S+   PT+  Y+ ++  
Sbjct: 947  CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDS 1003

Query: 449  FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             CK R  ++++EV+  M  K C+P    +  L       G   EA++L N L
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 249/490 (50%), Gaps = 36/490 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIES-----MVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           E  F ++++R +R+     S + I S     ++   C+P +V    L+    +      A
Sbjct: 437 EQCFEQMLEREWRS----SSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + ++E + + G  PDV  +N+++ G CK  +I  A+ V  R   RG  P+VVTY+ +I  
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           L     ++ A ++  +++   C+   +TY+ ++   +  G+ + A+ +L +M        
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G  K+  + +A   +R +   G  P V++Y  L   L   G+++E  +++ 
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKD 312
            M +RG  PN +TYS ++  LC+ G+  +A+    + A+++ + P   +Y  LI   CK 
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR+D A EFL+ MI  G +PD+V ++ ++   C  G  D  LE+F  +++ GC  ++ +Y
Sbjct: 733 GRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-E 431
           N M +A    G+   A  ++ EM + GI  + +T+  +I  LC +  +DEAV     + E
Sbjct: 793 NAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
             R     ISYN +I     +RR  +++E+L AM   G  P+   Y+ +++G+    ++A
Sbjct: 853 DCRDE---ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL----FKA 905

Query: 492 EAMELANALV 501
            + E+A  L+
Sbjct: 906 GSPEVAAKLL 915



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 244/470 (51%), Gaps = 12/470 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    +A + +E++  +++M    C P+VV    L+    Q R+ ++A  + ++++
Sbjct: 281 FSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMI 157
           + G   DV  YN L+ G CK  +I  A + ++ +R + G SP+VVT++ +I  LC+ G +
Sbjct: 338 ESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRV 397

Query: 158 ESAFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
             A++V+++++  +   P   TY  L++     G + +  +  ++M + ++     ++  
Sbjct: 398 NQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM-LEREWRSSSSWPI 456

Query: 217 ----VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
               V  L  + C+P +++YN L+  L   G   +   L+  MI  GL P+V+T++ ++ 
Sbjct: 457 HSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLD 516

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC++ +  DA +V + A E+G  P+  +Y  LI    K  ++D A++ L  M+  GC  
Sbjct: 517 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 576

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           + V Y+T++    K G  + A+ +  ++ D GC P+  +YNT+    +       A+G++
Sbjct: 577 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 636

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EML  G  P  +TY +L   LCR G  DEAV +L  M +    P  I+Y+ I+ G CK 
Sbjct: 637 REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 696

Query: 453 RRINESIEVLAAMF-EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            R+ E++     M  ++   P+   Y  LI+G+   G   EA E    ++
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 247/525 (47%), Gaps = 70/525 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  + D+    +E M   GC P+ V    L+     + ++ +A  ++E +   G  P++ 
Sbjct: 48  RDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELI 107

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I G CK  +IE A +V+D +  RGF PDV  + +++ +LC  G ++ A+  F Q+
Sbjct: 108 TFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKA---MKLLDEM--------------GMCKKGMV 210
           L     P  +TY  ++      G+ + A   ++LL E               G+ K G +
Sbjct: 168 LLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNL 227

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG----------- 259
             A++F  S+   G  P+ ++Y+ L+  L   GK +    L+ +  S+            
Sbjct: 228 TGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHG 287

Query: 260 ------LE------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
                 LE            PNVV ++ L++ LC+  + ++A ++    KE G + D  +
Sbjct: 288 LCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVIT 347

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMI-SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           Y+ L+   CK  R+  A   ++ M  ++GC P++V ++T++   C  G  +QA E++E++
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407

Query: 361 SDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-------------------- 399
             V G  PN  +Y  +   L  +GD  R      +ML +                     
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467

Query: 400 -IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P  +TYN+L++ L + GMV +A+GLL  M  +   P VI++N ++ G CK +RI ++
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             V     E+GC+PN  TY  LI+G+       EA++L   +V +
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 572



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 235/504 (46%), Gaps = 81/504 (16%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           +AG    +  F +SM   G  P+ V    LI    +  K + A+ ++   +K  +  +FA
Sbjct: 223 KAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR--DKNSQAGMFA 280

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +++L+ G C+A+++E A ++L   ++    P+VV +N ++  LC    ++ AF++FD + 
Sbjct: 281 FSSLLHGLCQAHRLEEAIQLL---KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE-SRGCQP 227
              C   VITY IL++                  G+CK   + +A++ V  +  + GC P
Sbjct: 338 ESGCSADVITYNILLK------------------GLCKLRRIPEAYRHVELMRRTEGCSP 379

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           +V++++ L++ L N G+  +  ++   M++  G+ PN  TY+ L+  LC+ G +      
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439

Query: 287 LRAAKEKGLT---------------------PDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
                E+                        P   +Y+ L++   K G +  A+  L++M
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           I  G  PD++ +N++L   CK      A  +F++  + GC PNV +Y+T+   L      
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559

Query: 386 IRALGMISEMLSKGIE-----------------------------------PDEITYNSL 410
             AL ++++M+  G                                     PD +TYN+L
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I    +   + EAVGLL +M    F P+V++Y  +  G C++ R +E++E+L  M  +GC
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679

Query: 471 KPNETTYVLLIEGIGYGGWRAEAM 494
            PN  TY  +++G+   G   EA+
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEAL 703



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 25/409 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  Y+ +I G C+ N+++   K+L+ +  RG +P+ VTYN ++ +L  +G  + AF +
Sbjct: 34  PTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSL 93

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            +++  + C P +IT+ ++I+                  G+CK+G +  AF+ V  +  R
Sbjct: 94  LERMAANGCPPELITFGLIIK------------------GLCKEGEIEAAFRVVDEMVDR 135

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PDV  + +LL  L  +G+ +E      +++  G  P+ VTY+ ++  L + G+ E A
Sbjct: 136 GFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAA 195

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             VL+   E   +P  +++   +    K G L  A EF D M   G  P+ V Y+ ++  
Sbjct: 196 GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDG 255

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G  D AL +   L D      + +++++   L  +     A+ ++  M      P+
Sbjct: 256 LCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PN 309

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            + +NSL++ LC+   VDEA  L   M+ +     VI+YNI++ G CK RRI E+   + 
Sbjct: 310 VVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVE 369

Query: 464 AMFE-KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            M   +GC PN  T+  LI+G+   G   +A E+   +V++  IS + F
Sbjct: 370 LMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 208/402 (51%), Gaps = 24/402 (5%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDV 106
            R+G+FDE++  ++ M A GC P+ +  + ++    +  +  +A+   E +  ++   P V
Sbjct: 660  RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             AY+ALI G CKA +I+ A + L+R+   G  PDVVT++I+I  LC  G I++  ++F  
Sbjct: 720  IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +    CK  +  Y  +I A  L+G+   A  LL+EM                  +C    
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
            + +A  +  S+    C+ D ISYN L+ +L+   + E+  +L+  M++ G  P+   Y  
Sbjct: 840  IDEAVSYFHSI-PEDCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            ++  L + G  E A  +L+  + +G +PD  +Y  +IS   K  +L LA ++ + M+   
Sbjct: 898  VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957

Query: 330  CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              PD + Y++++ AFCK    D A ++   L   G  P ++ Y+TM  +L  +    +AL
Sbjct: 958  LKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKAL 1014

Query: 390  GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
             +I EM SK  EP    + SL +    +G VDEAV L+ D++
Sbjct: 1015 EVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 181/373 (48%), Gaps = 47/373 (12%)

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +VTYN++I  LC  G +  AF  F + ++   +PTV+TY+ +I     + + DK  KLL+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           EM                    RGC P+ ++YN L+  LL  G+ +E   L+  M + G 
Sbjct: 61  EMA------------------GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGC 102

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P ++T+ ++I  LC++G+ E A  V+    ++G  PD   +  L+ A C+ GR+D A  
Sbjct: 103 PPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWF 162

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           F   ++  G  PD V YNT++    K G  + A  + + L++    P V ++      L 
Sbjct: 163 FFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLS 222

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST------- 433
            +G+   A      M   G+ P+ +TY++LI  LC+ G +D A+GLL D  S        
Sbjct: 223 KAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFS 282

Query: 434 ----------RFR------------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                     R              P V+ +N ++ G C+ RR++E+ E+   M E GC 
Sbjct: 283 SLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCS 342

Query: 472 PNETTYVLLIEGI 484
            +  TY +L++G+
Sbjct: 343 ADVITYNILLKGL 355



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 132/261 (50%), Gaps = 2/261 (0%)

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN+L+  L   G+  +      + I  G  P VVTYS +I  LCRD + +    +L 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G  P+A +Y+ L++A    GR   A   L+ M ++GC P+++ +  I+   CK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             + A  + +++ D G  P+V  +  +  AL   G    A     ++L  G  PD +TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           +++  L + G + EA G+++ + +  F  PTV ++ I + G  K   +  + E   +M +
Sbjct: 181 TMVDGLYKAGRL-EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 468 KGCKPNETTYVLLIEGIGYGG 488
            G  PN  TY  LI+G+   G
Sbjct: 240 TGVSPNTVTYDALIDGLCKAG 260



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 24/221 (10%)

Query: 37   ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            E  +  LI     + + +++L  + +MVA+G  PD      ++   F+      A ++++
Sbjct: 857  EISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQ 916

Query: 97   ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +   G  PD+  Y  +ISG  KA Q+ LA    + +  +   PD + Y+ +I + C   
Sbjct: 917  EMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD 976

Query: 156  MIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++ A+K    LLR +  +PT+  Y+ ++ +                  +CK     +A 
Sbjct: 977  KVDDAWK----LLRSSGIEPTITMYSTMVDS------------------LCKNRGTDKAL 1014

Query: 215  QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
            + +R ++S+ C+P +  +  L    +  G+ +E  KL+ ++
Sbjct: 1015 EVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 61/131 (46%)

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YN + + L  +G    A     + +  G  P  +TY+++I  LCRD  VD+   LL +M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P  ++YN ++       R  E+  +L  M   GC P   T+ L+I+G+   G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 491 AEAMELANALV 501
             A  + + +V
Sbjct: 123 EAAFRVVDEMV 133


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 237/476 (49%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV NG +PD +     +    +   +  A+ ++  +E
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244

Query: 100 K--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  + +P+V  Y+A+I G CK  +   ++ +   ++ +G  P++VTYN MIG  C  G  
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--------------- 349

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+YN ++       + +  E +   M ++G  P+V T++ LI   C  
Sbjct: 350 ---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L     +GL  +  +Y+ LI  +C  G L+ A++    MIS G  PDIV  
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +              G  P+V +YN +   L + G  +
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  + V M S  F P V+++N +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   +   Y+ LI G    G    A+++   ++S
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 220/457 (48%), Gaps = 33/457 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK      K   +L     +   G  PDVV  T L+     + + ++A   +++  
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA---LDLFH 175

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +   PDV  +  L++G C+  ++  A  +LDR+   G  PD +TY   +  +C  G   S
Sbjct: 176 QICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 160 AFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A  +  ++    + KP V+ Y+ +I                   G+CK G    +     
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIID------------------GLCKDGRHSDSHNLFI 277

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++ +G  P++++YN ++      G+W   ++L+ EM+ R + PNVVTY+ LI++  ++G
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  +A ++      +G+ P+  +Y+ +I  +CK  RLD A +    M + GC PD+  + 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  +C     D  +E+  ++   G   N  +YNT+       GD   AL +  +M+S 
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF-----------RPTVISYNIIIL 447
           G+ PD +T N+L+  LC +G + +A+ +   M+ ++             P V++YNI+I 
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G     +  E+ E+   M  +G  P+  TY  +I+G+
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 220/463 (47%), Gaps = 26/463 (5%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE- 99
           +KL   S+     ++++     M+ +   P V+   KL+    +  + +  + + + +E 
Sbjct: 50  LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMER 109

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K    D++++  LI  FC  +++  A     +L   G  PDVVT+  ++  LC    +  
Sbjct: 110 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSE 169

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  +F Q+    C+P V+T+T L+                   G+C++G V +A   +  
Sbjct: 170 ALDLFHQI----CRPDVLTFTTLMN------------------GLCREGRVVEAVALLDR 207

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM--ISRGLEPNVVTYSILISSLCRD 277
           +   G QPD I+Y   +  +  MG       L+ +M  IS  ++PNVV YS +I  LC+D
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSAIIDGLCKD 266

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  D+ ++    ++KG+ P+  +Y+ +I  +C  GR   A   L  M+     P++V Y
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ AF K G   +A E+++++   G  PN  +YN+M            A  M   M +
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG  PD  T+ +LI   C    +D+ + LL +M         ++YN +I GFC    +N 
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 446

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++++   M   G  P+  T   L++G+   G   +A+E+  A+
Sbjct: 447 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 189/400 (47%), Gaps = 23/400 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  +N L+    +  + +L   +  ++  +    D+ ++ I+I   CS   +  A   
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F +L +    P V+T+T L+    L+ +  +A+ L  ++                     
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--------------------- 177

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C+PDV+++  L+  L   G+  E   L+  M+  GL+P+ +TY   +  +C+ G T  A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236

Query: 284 VDVLRAAKE-KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           +++LR  +E   + P+   Y  +I   CKDGR   +      M   G  P+IV YN ++ 
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FC +G    A  + +++ +    PNV +YN + +A    G    A  +  EML +GI P
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITYNS+I   C+   +D A  +   M +    P V ++  +I G+C  +RI++ +E+L
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M  +G   N  TY  LI G    G    A++L+  ++S
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++  +   ++ M+     P+VV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN++I GFCK ++++ A  +   + ++G SPDV T+  +I   C    I+   ++  ++ 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R       +TY  LI    L G  + A+ L  +M                 G+C  G + 
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  ++++             G +PDV++YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  +++ LI+ YCK GR+D  +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + D + Y T++  F K GN + AL+IF+++   G  P+  +   M +  W
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 661 SKEELERAVAMLEDL 675



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  +S      M   G  P++V    +I  F    + + A R++ E+LE+   P+V 
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TYN MI   C +  +++A  +F  +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P V T+T LI       + D  M+LL EM                 G C  G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A    + + S G  PD+++ N LL  L + GK ++  ++   M              G
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V+TY+ILI  L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M S    P++V +NT++  +CK G  D  LE+F ++   G   +   Y T+    
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++       ++ AV +L D++
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAY 109
           GKF E+    E M   G  PD +  + +I    ++ + ++A ++ + +  K   P+V  +
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+CKA +++   ++   +  RG   D + Y  +I      G I  A  +F +++ 
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
               P  IT   ++     + + ++A+ +L+++ M
Sbjct: 643 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 221/451 (49%), Gaps = 19/451 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI     AG+ +E+L     M  + C P V   T LI       +  +A+ +  
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  EP+V  Y  LI G CK N+++ A K+L  +  +G  P VVTYN +I   C  G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           MI+ AF++ D +  ++C P   TY  LI                   G+CKK  V +A  
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELI------------------CGLCKKRKVHKAMA 425

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R   P +I+YN L+     +   E   +L++ M   GL P+  TYS+ I +LC
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G+ E+A  +  + K KG+  +   Y  LI  YCK G++D+A   L+ M++D CLP+  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK     +A  +  K+  +G  P V +Y  +   +   G    AL + + M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +PD  TY + +      GM++E   ++  M      P +++Y ++I G+ +    
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           + + + L  M + GCKP+     +LI+ + +
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 228/480 (47%), Gaps = 18/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  ++    + G   E+  +   +V  G  PD    T LI    + +  + A  V  I+ 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +  +Y  LI G C+A +I  A K+   +      P V TY ++I +L   G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+++    C+P V TYT+LI     E + D+A K+L EM                
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK+GM+  AF+ +  +ES  C P+  +YN L+  L    K  +   L+ +M+ R L 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++TY+ LI   C+    E A  +L    E GL PD ++Y   I   CK+GR++ A   
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D + + G   + V Y  ++  +CK G  D A  + E++ +  C PN  +YN +   L  
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 A  ++++ML+ G++P  +TY  LI  + +DG  D A+ +   M S  ++P V +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y   +  +     + E  +V+A M E+G  P+  TY +LI+G    G    A +    +V
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 205/409 (50%), Gaps = 18/409 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L     P+++ +NA+++G+CK   +  A     ++   G  PD  TY  +I   C  
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             +++A++VF  + +  C+   ++YT LI                   G+C+ G + +A 
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIH------------------GLCEAGRINEAL 284

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    +    C P V +Y +L+  L   G+  E   L  EM  +G EPNV TY++LI  L
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++ K ++A  +L    EKGL P   +Y+ LI  YCK+G +D A E LD M S+ C P+ 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++   CK     +A+ +  K+ +    P++ +YN++        D   A  ++S 
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G+ PD+ TY+  I  LC++G V+EA  L   +++   +   + Y  +I G+CK  +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I+ +  +L  M    C PN  TY +LIEG+       EA  L   +++M
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 228/492 (46%), Gaps = 47/492 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  D++   ++ M +N C P+     +LI    ++RK +KA+ ++ ++L
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P +  YN+LI G CK N +E A ++L  +   G  PD  TY++ I +LC  G +E
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD +     K   + YT LI      G+ D A  LL+ M                
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  + +A   V  + + G +P V++Y +L+  +L  G ++   K+   M+S G +
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V TY+  + +    G  E+  DV+    E+G+ PD  +Y  LI  Y + G    A +F
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 322 LDYMISDGCLPD----------------------------IVNYNTI-LAAFCKNGNADQ 352
           L  M+  GC P                             + N N++ +A   K    + 
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEI 731

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL++FEK+ + GC  +VS Y  + +          A G++  M  +G+ P E  YNSL+ 
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           C C+ G+  EAV L+  M      P + SY +++ G        ++  V   +   G   
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 851

Query: 473 NETTYVLLIEGI 484
           +E  + +LI+G+
Sbjct: 852 DEVAWKVLIDGL 863



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 181/352 (51%), Gaps = 10/352 (2%)

Query: 158 ESAFKVFDQL-LRDNCKPTVITYT----ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
           ++A   F+ + LR   K  V +Y+    ILI+A +L G  +K +++      C    V  
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL-GVAEK-IRISMIKSCCSIEDVLF 139

Query: 213 AFQFVRSLESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +  R + + G    +P +  YN +L +L      +E + +  E+++  + PN+ T++ 
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++  C+ G   +A        + GL PD ++Y  LI  +C++  +D A E    M   G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C  + V+Y  ++   C+ G  ++AL++F  +++  C P V +Y  +  AL  SG K+ AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + +EM  KG EP+  TY  LI  LC++  +DEA  +L +M      P+V++YN +I G+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK   I+++ E+L  M    C PN  TY  LI G+       +AM L N ++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 192/401 (47%), Gaps = 24/401 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+ +E+    +S+ A G K + V+ T LI  + +  K + A  ++E +L     P+ +
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G CK  +++ A+ ++ ++ + G  P VVTY I+IG +   G  + A KVF+ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P V TYT  + A   +G  ++   ++ +M                 G  + G+ 
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF F++ +   GC+P +   ++L++ L +  + +E    +      G++      S+ 
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI------GIDSVSNVNSVD 719

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ + +  + E A+ +     E G T D   Y  LI+ +C+  RL+ A   + +M   G 
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P    YN++L   CK G   +A+ + + + + G  P + SY  +   L+  G   +A  
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 839

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           +   +LS G   DE+ +  LI  L +  +VDE   L+  ME
Sbjct: 840 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 126/319 (39%), Gaps = 49/319 (15%)

Query: 30  LLSFDVKET--QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +L+  VK T   +  LI    + G FD +L     MV+ G +PDV   T  +  +F +  
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
             +   V+  + + G  PD+  Y  LI G+ +      A   L  +   G  P +   +I
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 147 MIGSLCSRGMI-----------------------------ESAFKVFDQLLRDNCKPTVI 177
           +I +L     +                             E A K+F++++   C   V 
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVS 749

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM---GM--------------CKKGMVGQAFQFVRSL 220
            Y  LI     + + ++A  L+  M   GM              CK G+  +A + V ++
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 809

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P + SY +L+  L   G  E+ + +   ++S G   + V + +LI  L +    
Sbjct: 810 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 869

Query: 281 EDAVDVLRAAKEKGLTPDA 299
           ++  +++   +EK  T  A
Sbjct: 870 DECSELIDIMEEKDATAQA 888


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 231/448 (51%), Gaps = 22/448 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   +  M  +GC P+ ++   LI    +  + N+A++++E +   G EPDV  +N +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CKA +I  A K+ DR+  R F+ D +    ++  LC  G ++ A  +  ++     
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN--- 333

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P  + Y  LI   ++ G+ ++A  LL       K MV   F+           PD  ++
Sbjct: 334 -PNTVLYNTLINGYVVSGRFEEAKDLL------YKNMVIAGFE-----------PDAFTF 375

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+++  L   G      + + EM+ +G EPNV+TY+ILI   C+ G  E+A  V+ +   
Sbjct: 376 NIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL+ +   Y+ LI A CKDG++  A++    M S GC PDI  +N+++   CKN   ++
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL ++  +   G   N  +YNT+  A        +A  ++ EM  +G   D ITYN LI 
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIK 555

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+ G  ++ +GL+  M      P++ S NI+I  FC+T ++N++++ L  M ++G  P
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  TY  LI G+   G   EA+ L N L
Sbjct: 616 DIVTYNSLINGLCKMGRFQEALNLFNGL 643



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 210/419 (50%), Gaps = 33/419 (7%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDES---LYFIESMVANGCKP 70
           +  R   S    PNT L         +  LI     +G+F+E+   LY  ++MV  G +P
Sbjct: 322 DEARAMLSKIPNPNTVL---------YNTLINGYVVSGRFEEAKDLLY--KNMVIAGFEP 370

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           D      +I    ++     A+  + E+++K  EP+V  Y  LI GFCK    E A+KV+
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           + + ++G S + V YN +IG+LC  G I+ A +++ ++    CKP + T+  LI      
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI------ 484

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+CK   + +A    R +   G   + ++YN L+   L +   ++ +
Sbjct: 485 ------------YGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           KL+ EM  RG   + +TY+ LI +LC+ G TE  + ++     + + P   S + LI+++
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G+++ A++FL  MI  G  PDIV YN+++   CK G   +AL +F  L   G  P+ 
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
            +YNT+ S     G    A  ++ + +S G  P+EIT++ LI+   ++    E   +L+
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILM 711



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 33/330 (10%)

Query: 206 KKGMVGQAFQFVRSLESRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           K G+ GQA + +  +    C +P   SYN++L  L+     +    +  +M+SRG+ P V
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T+ +++ + C   + + A  +LR   + G  P++  Y  LI A  ++ R++ A++ L+ 
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK--LSDVGCP---------------- 366
           M   GC PD+  +N ++   CK G   +A ++ ++  L D                    
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 367 -------------PNVSSYNTMFSALWSSGDKIRALGMI-SEMLSKGIEPDEITYNSLIS 412
                        PN   YNT+ +    SG    A  ++   M+  G EPD  T+N +I 
Sbjct: 321 VDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+ G +  A+  L +M    F P VI+Y I+I GFCK     E+ +V+ +M  KG   
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSL 440

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N   Y  LI  +   G   +A+++   + S
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSS 470



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 155/346 (44%), Gaps = 36/346 (10%)

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
           L+D++G    G      + ++ ++  GC      + +++R     G   +  +L+ +M  
Sbjct: 100 LIDKLG--NVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWG 157

Query: 258 -RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
               EP   +Y++++  L      + A +V      +G++P  Y++  ++ A+C    +D
Sbjct: 158 VYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVD 217

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  M   GC+P+ + Y  ++ A  +N   ++A+++ E++  +GC P+V ++N + 
Sbjct: 218 SACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVI 277

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV-------- 428
             L  +G    A  +   ML +    D +    L+  LCR G VDEA  +L         
Sbjct: 278 HGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV 337

Query: 429 ------------------------DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
                                   +M    F P   ++NI+I G CK   +  ++E L  
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           M +KG +PN  TY +LI+G    G   EA ++ N++ S   +S +T
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM-SAKGLSLNT 442



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 5/297 (1%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F ++   RG       Y +L+  L N+G+++  +KL+ +M   G       + +++    
Sbjct: 81  FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYG 140

Query: 276 RDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           + G    A  +L          P   SY+ ++          +A      M+S G  P +
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +  ++ AFC     D A  +   ++  GC PN   Y  +  AL  +     A+ ++ E
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G EPD  T+N +I  LC+ G + EA  L   M    F    +    ++ G C+  +
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++E+     AM  K   PN   Y  LI G    G   EA +L    + +     D F
Sbjct: 321 VDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 240/478 (50%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K + +  F+  M   G  PDVV    LI  + ++    +A  +M+ +   G +P VF YN
Sbjct: 269 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A+I+G CK  +   A  VLD +   G SPD  TYNI++   C    +  A ++FD++   
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 388

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +++++ LI      G  D+A+K   +M                 G C+ G++ +A
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 448

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  +GC  DV++YN +L  L       E ++L TEM  RG+ P+  T++ LI+ 
Sbjct: 449 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             +DG    AV +     ++ L PD  +Y+ LI  +CK   ++   E  + MIS    P+
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y  ++  +C  G   +A  +++++ + G    + + NT+      +G+ ++A   +S
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 628

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            ML KGI PD ITYN+LI+   ++  +D A  L+  ME++   P VI+YN+I+ GF +  
Sbjct: 629 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 688

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           R+ E+  ++  M E+G  P+ +TY  LI G        EA  + + ++    +  D F
Sbjct: 689 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 230/464 (49%), Gaps = 20/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L++   +A K  E       + + G    +  C  L+    +    + A  + + + 
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +V+  N +I+  CK  +IE     L  +  +G  PDVVTYN +I + C +G++E
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF++ D +     KP V TY  +I      G+  +A  +LDEM   K GM         
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM--LKIGM--------- 355

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                   PD  +YN+LL          + E++  EM S+G+ P++V++S LI  L ++G
Sbjct: 356 -------SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + A+   R  K  GL PD   Y  LI  +C++G +  A++  D M+  GC+ D+V YN
Sbjct: 409 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TIL   CK     +A E+F ++++ G  P+  ++ T+ +     G+  +A+ +   M+ +
Sbjct: 469 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            ++PD +TYN+LI   C+   +++   L  DM S R  P  ISY I+I G+C    ++E+
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 588

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME-LANALV 501
             +   M EKG +    T   +++G    G   +A E L+N L+
Sbjct: 589 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 632



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 60  IESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGF 116
           +ES+V     C  + ++   L++ + Q RK  +      +L+  G    + A N+L+ G 
Sbjct: 170 VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 229

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
            K   ++LA ++   +   G   +V T NIMI +LC    IE+       +      P V
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  LI A                   C++G++ +AF+ + S+  +G +P V +YN ++
Sbjct: 290 VTYNTLINA------------------YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 331

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L   GK+   + ++ EM+  G+ P+  TY+IL+   CR+    DA  +      +G+ 
Sbjct: 332 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 391

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  S+  LI    K+G LD A+++   M + G  PD V Y  ++  FC+NG   +AL++
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 451

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++ + GC  +V +YNT+ + L        A  + +EM  +G+ PD  T+ +LI+   +
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           DG +++AV L   M     +P V++YN +I GFCK   + +  E+   M  +   PN  +
Sbjct: 512 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571

Query: 477 YVLLIEGIGYGGWRAEAMELANALV 501
           Y +LI G    G  +EA  L + +V
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMV 596



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 18/453 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G  +E+   ++SM   G KP V     +I    +  K  +A  V++ + 
Sbjct: 292 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 351

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN L+   C+ + +  A ++ D + S+G  PD+V+++ +IG L   G ++
Sbjct: 352 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 411

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K F  +      P  + YTILI      G   +A+K+ DEM                
Sbjct: 412 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+ M+ +A +    +  RG  PD  ++  L+      G   +   L   MI R L+
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+ LI   C+  + E   ++      + + P+  SY  LI+ YC  G +  A   
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M+  G    I+  NTI+  +C+ GNA +A E    +   G  P+  +YNT+ +    
Sbjct: 592 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 651

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             +  RA  ++++M + G+ PD ITYN +++   R G + EA  +++ M      P   +
Sbjct: 652 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 711

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           Y  +I G      + E+  V   M ++G  P++
Sbjct: 712 YTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 208/423 (49%), Gaps = 26/423 (6%)

Query: 86  RKSNKAVRVMEILEK----YGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           RKS   V  +EI+E     YG    +   ++ L+  + +A ++    +    L+S+G   
Sbjct: 160 RKS--GVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 217

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
            +   N ++G L   G ++ A++++ +++R   +  V T  I+I A              
Sbjct: 218 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA-------------- 263

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   +     F+  +E +G  PDV++YN L+      G  EE  +LM  M  +G
Sbjct: 264 ----LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+P V TY+ +I+ LC+ GK   A  VL    + G++PD  +Y+ L+   C++  +  A 
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              D M S G +PD+V+++ ++    KNG  DQAL+ F  + + G  P+   Y  +    
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +G    AL +  EML +G   D +TYN++++ LC++ M+ EA  L  +M      P  
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            ++  +I G+ K   +N+++ +   M ++  KP+  TY  LI+G   G    +  EL N 
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 500 LVS 502
           ++S
Sbjct: 560 MIS 562


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 247/463 (53%), Gaps = 27/463 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEIL 98
           F  L+    + G+  +    +E+M A G +P+VV    L++   + ER       V +++
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 99  EKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            + G   PD+  Y+ L+SG+CKA ++E + ++L  + SRG  PD + Y  ++ SLC    
Sbjct: 73  SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSAR 132

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++ ++++R  C PT+IT+  LI                   G C++  +  A   
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLIS------------------GCCREKNLEMADSL 174

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           ++++ + G + DV++YN L+  L   G+ +E E+L+  M + G  P+VV YS  +  LC+
Sbjct: 175 LQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIV 335
            GK  +A  VL   ++    P+  +Y+ ++   CK G++D A+E ++ M S DGC  ++V
Sbjct: 235 SGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++   CK G   +A  + E ++  GC P+V +Y+++ + L  +G    A+  + EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-----RFRPTVISYNIIILGFC 450
             +G +P+ +TY SL+  LC  G + EA  ++ +M S         P+V +YN +I G C
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLC 414

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  RI+++++    M  +GC P+  +Y  ++EG+   G   +A
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 206/397 (51%), Gaps = 29/397 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   +NAL++GF K  +     ++L+ + +RG  P+VV+YN ++  LC       A   
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA--- 64

Query: 164 FDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            ++L+RD         P ++TY+ L+                   G CK G V ++ + +
Sbjct: 65  -EELVRDMISRGGRSTPDLVTYSTLLS------------------GYCKAGKVEESRELL 105

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + + SRG +PD + Y  ++ +L    +  E  +L+ EMI  G  P ++T++ LIS  CR+
Sbjct: 106 KEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCRE 165

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E A  +L+     G+  D  +Y+ L+   CK GRL  A + L+ M + GC PD+V Y
Sbjct: 166 KNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++ +   CK+G    A ++ E++ D    PNV +YNT+   L  SG    AL M+ +M S
Sbjct: 226 SSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285

Query: 398 K-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G   + + Y++++  LC+ G   EA  ++  M     RP V++Y+ ++ G CK  +I 
Sbjct: 286 SDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           E++E +  M  +GCKPN  TY  L+ G+   G  AEA
Sbjct: 346 EAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 21/336 (6%)

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R  C P  +T+  L+                   G  K+G  G   + + ++ +RG QP+
Sbjct: 3   RTGCPPNSVTFNALVN------------------GFSKQGRPGDCERLLETMAARGIQPN 44

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRDGKTEDAVDV 286
           V+SYN LL  L  + +W E E+L+ +MISRG    P++VTYS L+S  C+ GK E++ ++
Sbjct: 45  VVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESREL 104

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L+    +GL PDA  Y  ++++ CK  RL  A+E L+ MI  GC P ++ +NT+++  C+
Sbjct: 105 LKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR 164

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N + A  + + ++  G   +V +YNT+   L  +G    A  ++  M + G  PD + 
Sbjct: 165 EKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+S +  LC+ G V  A  +L  M  +   P V++YN I+ G CK+ +I+ ++E++  M 
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284

Query: 467 EK-GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              GC  N   Y  +++G+   G   EA  +  A+ 
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 162/285 (56%), Gaps = 2/285 (0%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++  GC P+ +++N L+      G+  + E+L+  M +RG++PNVV+Y+ L+  LC+  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 280 TEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
             +A +++R    +G   TPD  +Y  L+S YCK G+++ + E L  +IS G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             ++A+ CK+    +ALE+ E++   GC P + ++NT+ S      +   A  ++  M +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++ D +TYN+L+  LC+ G + EA  LL  M+++   P V++Y+  + G CK+ ++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + +VL  M +    PN  TY  +++G+   G    A+E+   + S
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 237/476 (49%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV NG +PD +     +    +   +  A+ ++  +E
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244

Query: 100 K--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  + +P+V  Y+A+I G CK  +   ++ +   ++ +G  P++VTYN MIG  C  G  
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--------------- 349

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+YN ++       + +  E +   M ++G  P+V T++ LI   C  
Sbjct: 350 ---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L     +GL  +  +Y+ LI  +C  G L+ A++    MIS G  PDIV  
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +              G  P+V +YN +   L + G  +
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  + V M S  F P V+++N +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   +   Y+ LI G    G    A+++   ++S
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 220/457 (48%), Gaps = 33/457 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK      K   +L     +   G  PDVV  T L+     + + ++A   +++  
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA---LDLFH 175

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +   PDV  +  L++G C+  ++  A  +LDR+   G  PD +TY   +  +C  G   S
Sbjct: 176 QICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 160 AFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A  +  ++    + KP V+ Y+ +I                   G+CK G    +     
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIID------------------GLCKDGRHSDSHNLFI 277

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++ +G  P++++YN ++      G+W   ++L+ EM+ R + PNVVTY+ LI++  ++G
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  +A ++      +G+ P+  +Y+ +I  +CK  RLD A +    M + GC PD+  + 
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  +C     D  +E+  ++   G   N  +YNT+       GD   AL +  +M+S 
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF-----------RPTVISYNIIIL 447
           G+ PD +T N+L+  LC +G + +A+ +   M+ ++             P V++YNI+I 
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G     +  E+ E+   M  +G  P+  TY  +I+G+
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 220/463 (47%), Gaps = 26/463 (5%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE- 99
           +KL   S+     ++++     M+ +   P V+   KL+    +  + +  + + + +E 
Sbjct: 50  LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMER 109

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K    D++++  LI  FC  +++  A     +L   G  PDVVT+  ++  LC    +  
Sbjct: 110 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSE 169

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  +F Q+    C+P V+T+T L+                   G+C++G V +A   +  
Sbjct: 170 ALDLFHQI----CRPDVLTFTTLMN------------------GLCREGRVVEAVALLDR 207

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM--ISRGLEPNVVTYSILISSLCRD 277
           +   G QPD I+Y   +  +  MG       L+ +M  IS  ++PNVV YS +I  LC+D
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSAIIDGLCKD 266

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  D+ ++    ++KG+ P+  +Y+ +I  +C  GR   A   L  M+     P++V Y
Sbjct: 267 GRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ AF K G   +A E+++++   G  PN  +YN+M            A  M   M +
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG  PD  T+ +LI   C    +D+ + LL +M         ++YN +I GFC    +N 
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 446

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++++   M   G  P+  T   L++G+   G   +A+E+  A+
Sbjct: 447 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 189/400 (47%), Gaps = 23/400 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  +N L+    +  + +L   +  ++  +    D+ ++ I+I   CS   +  A   
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F +L +    P V+T+T L+    L+ +  +A+ L  ++                     
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--------------------- 177

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C+PDV+++  L+  L   G+  E   L+  M+  GL+P+ +TY   +  +C+ G T  A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236

Query: 284 VDVLRAAKE-KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           +++LR  +E   + P+   Y  +I   CKDGR   +      M   G  P+IV YN ++ 
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FC +G    A  + +++ +    PNV +YN + +A    G    A  +  EML +GI P
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITYNS+I   C+   +D A  +   M +    P V ++  +I G+C  +RI++ +E+L
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M  +G   N  TY  LI G    G    A++L+  ++S
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++  +   ++ M+     P+VV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN++I GFCK ++++ A  +   + ++G SPDV T+  +I   C    I+   ++  ++ 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R       +TY  LI    L G  + A+ L  +M                 G+C  G + 
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  ++++             G +PDV++YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  +++ LI+ YCK GR+D  +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + D + Y T++  F K GN + AL+IF+++   G  P+  +   M +  W
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 661 SKEELERAVAMLEDL 675



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  +S      M   G  P++V    +I  F    + + A R++ E+LE+   P+V 
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TYN MI   C +  +++A  +F  +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P V T+T LI       + D  M+LL EM                 G C  G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A    + + S G  PD+++ N LL  L + GK ++  ++   M              G
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V+TY+ILI  L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M S    P++V +NT++  +CK G  D  LE+F ++   G   +   Y T+    
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++       ++ AV +L D++
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 245/464 (52%), Gaps = 18/464 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KFD  +   E M   G   ++     LI  F +  + + A+ ++  +
Sbjct: 12  EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP +   ++L++G+C   +I  A  ++D++   G+ PD +T+  +I  L      
Sbjct: 72  MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + D++++  C+P ++TY +++      G  D A  LL++M               
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK   V  A    + +E++G +P+V++Y+ L+  L + G+W +  +L+++MI + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN+VT++ LI +  ++GK  +A  +     ++ + PD ++Y+ LI+ +C   RLD A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             ++M+S  C PD+  YNT++  FCK+   +   E+F ++S  G   +  +Y T+   L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             GD   A  +  +M+S G+ PD +TY+ L+  LC +G +++A+ +   M+ +  +  + 
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            Y  +I G CK  ++++  ++  ++  KG KPN  TY  +I G+
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 199/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+P++V    ++    +    + A  ++  +E
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               E DV  +N +I   CK   ++ A  +   + ++G  P+VVTY+ +I  LCS G   
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P ++T+  LI A + EG+  +A KL D+M                
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A Q    + S+ C PD+ +YN L++      + E+G +L  EM  RGL 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VTY+ LI  L  DG  ++A  V +     G+ PD  +Y  L+   C +G+L+ A+E 
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            DYM       DI  Y T++   CK G  D   ++F  LS  G  PNV +YNTM S L S
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 A  ++ +M   G  PD  TYN+LI    RDG    +  L+ +M S RF
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 195/399 (48%), Gaps = 18/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +F +N L+S   K  + +L   + ++++  G S ++ TYNI+I   C R  I  A  +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P+++T + L+                   G C    +  A   V  +   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLN------------------GYCHGKRISDAVALVDQMVEM 109

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD I++  L+  L    K  E   L+  M+ RG +PN+VTY ++++ LC+ G  + A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            ++L   +   +  D   ++ +I + CK   +D A+     M + G  P++V Y+++++ 
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G    A ++   + +    PN+ ++N +  A    G  + A  +  +M+ + I+PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYNSLI+  C    +D+A  +   M S    P + +YN +I GFCK++R+ +  E+  
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +G   +  TY  LI+G+ + G    A ++   +VS
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 166/345 (48%), Gaps = 31/345 (8%)

Query: 2   STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           S+++SC+      S+    +S   E + N +L++F+        LI    + GKF E+  
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 276

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFC 117
             + M+     PD+     LI  F    + +KA ++ E +  K   PD+  YN LI GFC
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K+ ++E   ++   +  RG   D VTY  +I  L   G  ++A KVF Q++ D   P ++
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY+IL+      G+ +KA+++ D M                 GMCK G V   +    SL
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G +P+V++YN ++  L +    +E   L+ +M   G  P+  TY+ LI +  RDG  
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
             + +++R  +      DA S   L++    DGRLD +  FLD +
Sbjct: 517 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 558



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 88/176 (50%)

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+    LP I  +N +L+A  K    D  + + EK+  +G   N+ +YN + +       
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL ++ +M+  G EP  +T +SL++  C    + +AV L+  M    +RP  I++  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +I G     + +E++ ++  M ++GC+PN  TY +++ G+   G    A  L N +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 51/102 (50%)

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P    +N L+S + +    D  + L   M+       + +YNI+I  FC+  +I+ ++ +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           L  M + G +P+  T   L+ G  +G   ++A+ L + +V M
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 109


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 233/459 (50%), Gaps = 20/459 (4%)

Query: 39  QFMKLIKRSFRAGKF-DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           QF KL+    + G++ D  +   + M   G  P++   + LI  F   ++ + A  V+  
Sbjct: 99  QFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAK 158

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +P +  +  LI+  CK  +   A ++ D + +RG  PDV TY  +I  LC  G 
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
             +A  +  ++    C+P V+TY+ +I +   + + ++A+ +   M              
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM-------------- 264

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               + +G  PD+ +YN L++ L N  +W+E   L+ EM S  + P++VT+++L+ ++C+
Sbjct: 265 ----KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICK 320

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +GK  +A  VL+   E G+ PD  +Y  L+  Y     +  A +  D MI+ GC PD+ +
Sbjct: 321 EGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFS 380

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +CK    D+A ++F ++   G  PN  SYNT+   L   G    A  +   M 
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G  P+  TY+ L+   C+ G   +A  L   M+ST  +P ++ YNI+I   CK+  + 
Sbjct: 441 TNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLR 500

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           ++ ++ + +F KG +PN   Y  +I G+   G   EA+E
Sbjct: 501 DARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 231/451 (51%), Gaps = 29/451 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GKF +++   + MVA GC+PDV   T +I    +  ++  A  +++ +E
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKME 230

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+V  Y+ +I    K  ++  A  +   ++ +G SPD+ TYN +I  LC+    +
Sbjct: 231 EAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK 290

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + +++   N  P ++T+ +L+                    +CK+G V +A   ++
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDT------------------ICKEGKVSEAQGVLK 332

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G +PDV++Y+ L+       +  E  KL   MI++G +P+V +Y+ILI+  C+  
Sbjct: 333 TMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +      +GLTP+  SY+ LI   C+ G L  A      M ++G LP++  Y+
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FCK G   +A  +F  +      PN+  YN +  A+  SG+   A  + SE+  K
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+   Y ++I+ LC++G++DEA+    +ME     P  ISYN+II GF   +  + +
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           ++++  M +KG           I  +G   W
Sbjct: 573 VQLIGEMRDKG----------FIADVGTTAW 593



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 203/411 (49%), Gaps = 19/411 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQI-ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            +L +   P +  +  L+S   K  Q  +    +  ++   G SP++ T +I+I      
Sbjct: 87  HMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHL 146

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++ AF V  ++++   +PT++T+T LI                    +CK G   QA 
Sbjct: 147 QRVDLAFSVLAKIIKLGLQPTIVTFTTLIN------------------WLCKVGKFAQAM 188

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    + +RGC+PDV +Y  ++  L  +G+      L+ +M   G +PNVVTYS +I S 
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            +D +  +A+D+    K KG++PD ++Y+ LI   C   +   A   L+ M S   +PDI
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDI 308

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V +N ++   CK G   +A  + + ++++G  P+V +Y+++        + + A  +   
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDA 368

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M++KG +PD  +YN LI+  C+   +DEA  L  +M      P  +SYN +I G C+   
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           + E+  +   M   G  PN  TY +L++G    G+  +A  L  A+ S ++
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 241/481 (50%), Gaps = 32/481 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  V+ ++ MKL+          ES+Y    M A G KPDVV    L+K
Sbjct: 143 QADTVVYNHLLNVLVEGSK-MKLL----------ESVY--SEMGARGIKPDVVTFNTLMK 189

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +   G  PD   +  L+ GF +   IE A +V  R+   G S 
Sbjct: 190 ALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     Q + D  +P  ITY   +                
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN--------------- 294

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C+   VG A + +  +   G  PDV +YN+++  L   G+ EE + ++ +M+ RG
Sbjct: 295 ---GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++ T++ LI++LC   + E+A+D+ R    KG++PD Y+++ LI+A CK G   LA+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M + GC PD V YNT++   C  G   +AL++ + +   GCP +  +YNT+   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M  +GI  + IT+N+LI  LC+D  +D+A  L+  M S   +P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+YN I+  +CK   I ++ ++L  M   G + +  TY  LI G+   G    A+++   
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 500 L 500
           +
Sbjct: 592 M 592



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 19/439 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  L+K   RA +   ++  +E M + G  PD    T L++ F +E     A+RV   +L
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E          N LI+G+CK  ++E A   + +  + GF PD +TYN  +  LC    + 
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KV D ++++   P V TY I++                    +CK G + +A   + 
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNC------------------LCKNGQLEEAKGILN 345

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RGC PD+ ++N L+  L    + EE   L  ++  +G+ P+V T++ILI++LC+ G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A+ +    K  G TPD  +Y+ LI   C  G+L  A++ L  M S GC    + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI+   CK    ++A E+F+++   G   N  ++NT+   L        A  +I++M+S+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ ITYNS+++  C+ G + +A  +L  M +  F   V++Y  +I G CK  R   +
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 459 IEVLAAMFEKGCKPNETTY 477
           ++VL  M  KG +P    Y
Sbjct: 586 LKVLRGMRIKGMRPTPKAY 604



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 235/444 (52%), Gaps = 20/444 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD +     +    Q      A++VM+++ + G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +++  CK  Q+E A  +L+++  RG  PD+ T+N +I +LC+   +E A 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  Q+      P V T+ ILI A    G    A++L +EM                  +
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM------------------K 418

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC PD ++YN L+  L ++GK  +   L+ +M S G   + +TY+ +I  LC+  + E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++ +A +++ LI   CKD ++D A E ++ MIS+G  P+ + YN+IL
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KG+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
           P    YN ++  L R   + +A+ L  +M      P  ++Y I+  G C+    I E+ +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
            +  M +KG  P  +++ +L EG+
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 70/351 (19%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------------- 268
           +RG +PDV+++N L++ L    +      ++ EM SRG+ P+  T++             
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 269 ----------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY---- 302
                                 +LI+  C+ G+ EDA+  ++     G  PD  +Y    
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 303 ------------------------DPLISAY-------CKDGRLDLAIEFLDYMISDGCL 331
                                   DP +  Y       CK+G+L+ A   L+ M+  GCL
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDI  +NT++AA C     ++AL++  +++  G  P+V ++N + +AL   GD   AL +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM + G  PDE+TYN+LI  LC  G + +A+ LL DMEST    + I+YN II G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             RI E+ EV   M  +G   N  T+  LI+G+       +A EL N ++S
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 40/322 (12%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V  Y  ++R L  +G  +  + L+ EM   G +  +      + S       +DAVD+
Sbjct: 74  PEV--YEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 287 LRAAKEK--GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +    +   G+  D   Y+ L++   +  ++ L       M + G  PD+V +NT++ A 
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD-------KIR---------- 387
           C+      A+ + E++S  G  P+ +++ T+       G        K R          
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 388 ------------------ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                             ALG I + ++ G EPD+ITYN+ ++ LC++  V  A+ ++  
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P V +YNI++   CK  ++ E+  +L  M ++GC P+ TT+  LI  +  G  
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 490 RAEAMELANALVSMHAISRDTF 511
             EA++LA   V++  +S D +
Sbjct: 372 LEEALDLARQ-VTVKGVSPDVY 392



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+V    +  LI    +AG+   +L  +  M   G +P       +++  F+      A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           + +   + + GE PD   Y  +  G C+    I+ A   +  +  +GF P+  ++ ++  
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 680

Query: 150 SLCSRGM 156
            L + GM
Sbjct: 681 GLLNLGM 687


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 232/470 (49%), Gaps = 19/470 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   FRAG  D ++  ++SM   G KP +V    ++K   + R+ +KA  V   +++  
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV ++N LI GFC+  ++E A K    ++ RG +PDVV+++ +IG   +RG ++ A 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
               ++      P  + YT++I                   G C+ G + +A +    + 
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIG------------------GFCRAGSMSEALRVRDEMV 359

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             GC PDV++YN LL  L    +  + E+L+ EM  RG+ P++ T++ LI   CRDG  E
Sbjct: 360 GLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFE 419

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+ +      + L PD  +Y+ LI   C+ G L  A E  D M +    P+ V Y+ ++
Sbjct: 420 KALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILI 479

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            + C+ G  ++A    +++   G  PN+ +YN++      SG+  +    + +M+   I 
Sbjct: 480 DSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNIL 539

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD IT+N+LI    ++  +  A  +   ME    +P  ++YN+II GF +   + E+  V
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRV 599

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              M   G +P+  TY+ LI G    G   EA +L + ++       D F
Sbjct: 600 FKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 206/404 (50%), Gaps = 17/404 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L    E + +  N ++  +CK+ + + A+ V+  +  R   PDVVT+N++I +    G 
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +++A  + D +     KP ++T+  +++      + DKA ++   M              
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G C+ G V +A +F + ++ RG  PDV+S++ L+      GK +     + EM   G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L P+ V Y+++I   CR G   +A+ V       G  PD  +Y+ L++  CK  RL  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E L+ M   G  PD+  + T++  +C++GN ++AL++F+ L      P+V +YN++   +
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD  +A  +  +M ++ I P+ +TY+ LI   C  G V+EA G L +M S    P +
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++YN II G+C++  + +  + L  M +    P+  T+  LI G
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 230/461 (49%), Gaps = 21/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++ S R G     +  + S++A+   P   +   LI+ + Q RK  +A     +L  + 
Sbjct: 60  LLRMSRRRGASRREI--VSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHR 117

Query: 103 EP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            P    A NAL++   +A    LA +    + S     +  T NIM+ S C     + A 
Sbjct: 118 VPVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKAD 177

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V  ++ +    P V+T+ +LI A    G  D A+ L+D                  S+ 
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVD------------------SMA 219

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           ++G +P ++++N +L+ L    ++++ +++   M    + P+V +++ILI   CR G+ E
Sbjct: 220 NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+   +  +++G+TPD  S+  LI  +   G++D A  +L  M   G +PD V Y  ++
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC+ G+  +AL + +++  +GC P+V +YNT+ + L      + A  +++EM  +G+ 
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  T+ +LI   CRDG  ++A+ L   +   R RP V++YN +I G C+   + ++ E+
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              M  +   PN  TY +LI+     G   EA    + +VS
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 218/412 (52%), Gaps = 19/412 (4%)

Query: 104 PDVFAYNALISGFCKANQ--IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           PDV+    LI+ FC +N      A  VL  +   G  P+ VT++ ++  L S+  I  A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+FD++++   +P VITY+ +I      G T  A++LL +M                  +
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  ++ +A +F+  + +RG  P+V++Y+ +L    N+G+  E   L  +M+ R + P+ 
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT++IL+  L ++G   +A  V     EKG+ P+  +Y+ L+  YC   ++D A +  + 
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  GC P + +YN ++   CK+G  D+A  +  ++S     P+  +Y+T+       G 
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ EM S G+ PD +TY+ ++  LC+ G +DEA  LL  M+ ++  P +  Y I
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I G C   ++  + E+ + +F KG +P+  TY ++I G+  GG   EA EL
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL 419



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 232/448 (51%), Gaps = 22/448 (4%)

Query: 55  ESLYFIESMVAN----GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           +  +F  S++ N    G +P+ V  + L+     + K   AV++ + + K G EPDV  Y
Sbjct: 26  DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITY 85

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + +I+G CK     +A ++L ++  +G  P+VV Y+ +I SLC   +I  A +   +++ 
Sbjct: 86  STIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+TY+ ++      G++++A  L  +M                 G+ K+GM+ +
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A     ++  +G +P+V +YN L+    +  + +E +KL   M+ +G  P+V +Y+ILI 
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G+ ++A  +L     K LTPD  +Y  L+  +C+DGR   A + L+ M S G LP
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D++ Y+ +L   CK G+ D+A E+ + + +    PN+  Y  +   + + G    A  + 
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELF 385

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           S +  KGI+PD +TY  +IS L + G+ +EA  L  DM      P   +YN+II GF + 
Sbjct: 386 SNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRN 445

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLL 480
              + +  ++  M  +G   + +T+ +L
Sbjct: 446 GDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 199/390 (51%), Gaps = 18/390 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    ++  ++ M   GCKP+VV+ + +I    +++   +A+  + E++ +   P+V 
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y++++ GFC   +   A  +  ++  R   PD VT+NI++  L   GMI  A  VF+ +
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P V TY  L+     + Q D+A KL + M                 G CK G +
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +   PD ++Y+ L++     G+ ++ +KL+ EM S GL P+++TYSI+
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC+ G  ++A ++L+A +E  + P+ + Y  LI   C  G+L+ A E    +   G 
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V Y  +++   K G +++A E+F  ++  GC PN  +YN +      +GD   A  
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +I EM+ +G   D  T+  L     RD ++
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSDLESRDEII 483


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 241/481 (50%), Gaps = 32/481 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  V+ ++ MKL+          ES+Y    M A G KPDVV    L+K
Sbjct: 143 QADTVVYNHLLNVLVEGSK-MKLL----------ESVY--SEMGARGIKPDVVTFNTLMK 189

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +   G  PD   +  L+ GF +   IE A +V  R+   G S 
Sbjct: 190 ALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     Q + D  +P  ITY   +                
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN--------------- 294

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C+   VG A + +  +   G  PDV +YN+++  L   G+ EE + ++ +M+ RG
Sbjct: 295 ---GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P++ T++ LI++LC   + E+A+D+ R    KG++PD Y+++ LI+A CK G   LA+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M + GC PD V YNT++   C  G   +AL++ + +   GCP +  +YNT+   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M  +GI  + IT+N+LI  LC+D  +D+A  L+  M S   +P  
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+YN I+  +CK   I ++ ++L  M   G + +  TY  LI G+   G    A+++   
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 500 L 500
           +
Sbjct: 592 M 592



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 19/439 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  L+K   RA +   ++  +E M + G  PD    T L++ F +E     A+RV   +L
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E          N LI+G+CK  ++E A   + +  + GF PD +TYN  +  LC    + 
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KV D ++++   P V TY I++                    +CK G + +A   + 
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNC------------------LCKNGQLEEAKGILN 345

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RGC PD+ ++N L+  L    + EE   L  ++  +G+ P+V T++ILI++LC+ G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A+ +    K  G TPD  +Y+ LI   C  G+L  A++ L  M S GC    + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TI+   CK    ++A E+F+++   G   N  ++NT+   L        A  +I++M+S+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ ITYNS+++  C+ G + +A  +L  M +  F   V++Y  +I G CK  R   +
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 459 IEVLAAMFEKGCKPNETTY 477
           ++VL  M  KG +P    Y
Sbjct: 586 LKVLRGMRIKGMRPTPKAY 604



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 235/444 (52%), Gaps = 20/444 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD +     +    Q      A++VM+++ + G
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +++  CK  Q+E A  +L+++  RG  PD+ T+N +I +LC+   +E A 
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  Q+      P V T+ ILI A    G    A++L +EM                  +
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM------------------K 418

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC PD ++YN L+  L ++GK  +   L+ +M S G   + +TY+ +I  LC+  + E
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V      +G++ +A +++ LI   CKD ++D A E ++ MIS+G  P+ + YN+IL
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KG+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
           P    YN ++  L R   + +A+ L  +M      P  ++Y I+  G C+    I E+ +
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
            +  M +KG  P  +++ +L EG+
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 70/351 (19%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------------- 268
           +RG +PDV+++N L++ L    +      ++ EM SRG+ P+  T++             
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 269 ----------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY---- 302
                                 +LI+  C+ G+ EDA+  ++     G  PD  +Y    
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 303 ------------------------DPLISAY-------CKDGRLDLAIEFLDYMISDGCL 331
                                   DP +  Y       CK+G+L+ A   L+ M+  GCL
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDI  +NT++AA C     ++AL++  +++  G  P+V ++N + +AL   GD   AL +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM + G  PDE+TYN+LI  LC  G + +A+ LL DMEST    + I+YN II G CK
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             RI E+ EV   M  +G   N  T+  LI+G+       +A EL N ++S
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 40/322 (12%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V  Y  ++R L  +G  +  + L+ EM   G +  +      + S       +DAVD+
Sbjct: 74  PEV--YEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 287 LRAAKEK--GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +    +   G+  D   Y+ L++   +  ++ L       M + G  PD+V +NT++ A 
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD-------KIR---------- 387
           C+      A+ + E++S  G  P+ +++ T+       G        K R          
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 388 ------------------ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                             ALG I + ++ G EPD+ITYN+ ++ LC++  V  A+ ++  
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P V +YNI++   CK  ++ E+  +L  M ++GC P+ TT+  LI  +  G  
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 490 RAEAMELANALVSMHAISRDTF 511
             EA++LA   V++  +S D +
Sbjct: 372 LEEALDLARQ-VTVKGVSPDVY 392



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+V    +  LI    +AG+   +L  +  M   G +P       +++  F+      A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           + +   + + GE PD   Y  +  G C+    I+ A   +  +  +GF P+  ++ ++  
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 680

Query: 150 SLCSRGM 156
            L + GM
Sbjct: 681 GLLNLGM 687


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 255/488 (52%), Gaps = 36/488 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANG------CKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           L+K   + G  + +L   + M+ +       CKP ++  + +I    ++R+ ++A  + +
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFK 326

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G  PDV +Y  LI GFC + + E A  + + +   G  PDV T +++I  LC +G
Sbjct: 327 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 386

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A K+ + +++  C P V+T T L++   ++ +  KA +L  +M             
Sbjct: 387 KVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 446

Query: 203 ----GMCKKGMVGQAFQFVRSLESR------GCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
               G+C+ G +  A +  +++ S        C+P+ ISY++++  L   G+ +E  +L 
Sbjct: 447 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 506

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM + G+ P+V++Y+ LI   CR GK +DA  +     + G+ PD  ++  LI   CK+
Sbjct: 507 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKE 566

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G++  A E L+ MI  GC+P+ V Y T++   C N    +A ++F K+  +GC P+V +Y
Sbjct: 567 GKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTY 626

Query: 373 NTMFSALWSSGDKIRALGMISEMLS------KGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            T+   L  +G+   AL +  +MLS         +PD I+Y+ +I  LC+ G  DEA  L
Sbjct: 627 GTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 686

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             +M++    P VISY  +I GFC++ ++ ++  +   M ++G + N  TY ++I G   
Sbjct: 687 FKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCK 746

Query: 487 GGWRAEAM 494
            G   +A+
Sbjct: 747 EGQIDKAL 754



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 245/511 (47%), Gaps = 66/511 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R+GK++++      M+  G + DV   + LI    +E K  +A  ++E++ 
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G   D+  Y+ LI G C  ++I  A ++   ++  G  PD + Y  ++  LC  G I 
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNIN 278

Query: 159 SAFKVFDQLLRDN------CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
           +A ++  ++L D       CKPT+I+Y+I+I                   G+CK     +
Sbjct: 279 TALQLHQEMLNDTGRYGIKCKPTLISYSIIID------------------GLCKDRREDE 320

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +  + ++++G  PDVISY  L+      GKWE+ + L  EM+  G++P+V T S+LI 
Sbjct: 321 ARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC---------------------- 310
            LC+ GK  +A  +L    ++G  PD  +   L+   C                      
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440

Query: 311 -------------KDGRLDLAIEFLDYMISD------GCLPDIVNYNTILAAFCKNGNAD 351
                        + G + +A+E    M+SD       C P+ ++Y+ I+   CK G  D
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+F+++  +G  P+V SY ++      SG    A  + +EM+  G++PD  T++ LI
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC++G V EA  LL  M      P  ++Y  ++ G C   RI+E+ ++   M + GC 
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY  L++G+   G    A+EL   ++S
Sbjct: 621 PDVVTYGTLMKGLCQTGNIKTALELHKKMLS 651



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 241/498 (48%), Gaps = 36/498 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           +  LIK      +  E+     SM   GC+PD +    L+K   Q    N A+++  E+L
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288

Query: 99  E---KYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               +YG   +P + +Y+ +I G CK  + + A ++   ++++G  PDV++Y  +I   C
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E A  +F+++L    +P V T ++LI     +G+  +A KLL+ +          
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C K  + +A Q    ++  GC P+V++   L++ L   G  +   +L   M
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468

Query: 256 ISR------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +S         +PN ++YSI+I  LC+ G+ ++A ++ +  K  G+ PD  SY  LI  +
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G+   A    + M+  G  PD+  ++ ++   CK G   +A E+ E +   GC PN 
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y T+   L  +     A  +  +M   G  PD +TY +L+  LC+ G +  A+ L   
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 648

Query: 430 MES------TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           M S      T F+P VISY+III G CK  R +E+ E+   M   G  PN  +Y  LI G
Sbjct: 649 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 708

Query: 484 IGYGGWRAEAMELANALV 501
               G   +A  L N +V
Sbjct: 709 FCRSGKLEDAKHLFNEMV 726



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 246/494 (49%), Gaps = 36/494 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+   +E M+  GC  D+V  + LIK    + + ++A R+   ++K G  PD  
Sbjct: 203 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAI 262

Query: 108 AYNALISGFCKANQI----ELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAF 161
           AY  L+ G C+   I    +L  ++L+     G    P +++Y+I+I  LC     + A 
Sbjct: 263 AYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 322

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F ++      P VI+YT LI    L G+ +KA  L +EM                  +
Sbjct: 323 ELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 382

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CKKG V +A + +  +  RGC PDV++   L++ L    +  +  +L  +M   G  PNV
Sbjct: 383 CKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 442

Query: 265 VTYSILISSLCRDGKTEDAVDV----LRAAKEKGLT--PDAYSYDPLISAYCKDGRLDLA 318
           VT + L+  LC+ G  + A+++    L      G+   P+A SY  +I   CK GR D A
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E    M + G +PD+++Y +++  FC++G    A  +F ++ D+G  P+V++++ +   
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G  I A  ++  M+ +G  P+ +TY +L+  LC +  + EA  L + M+     P 
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 439 VISYNIIILGFCKTRRINESIEVLAAM------FEKGCKPNETTYVLLIEGIGYGGWRAE 492
           V++Y  ++ G C+T  I  ++E+   M      +    KP+  +Y ++I+G+   G   E
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682

Query: 493 AMELANALVSMHAI 506
           A EL   + ++  I
Sbjct: 683 ARELFKEMKALGVI 696



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 267/566 (47%), Gaps = 72/566 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  LIK      +  E+     SM   GC+PD +    L+K   Q  K N A+ + + + 
Sbjct: 48  YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 107

Query: 99  ---EKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               +YG   +P + +Y+ +I G CK  + + A ++   ++++G  PDV++Y  +I   C
Sbjct: 108 NDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 167

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E A  +F+++L    +  V T ++LI     EG+  +A +LL+ M          
Sbjct: 168 RSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 227

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C K  + +A +   S++  GC+PD I+Y  L++ L   G      +L  EM
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287

Query: 256 ISRG------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           ++         +P +++YSI+I  LC+D + ++A ++ +  K +G+ PD  SY  LI  +
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347

Query: 310 CKDGR-----------LDLAIE------------------------FLDYMISDGCLPDI 334
           C  G+           LD+ I+                         L+ +I  GC+PD+
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDV 407

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V   T++   C      +A ++F K+  +GC PNV +  T+   L  SG+   AL +   
Sbjct: 408 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 467

Query: 395 MLSK----GI--EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           MLS     GI  +P+ I+Y+ +I  LC+ G  DEA  L  +M++    P VISY  +I G
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           FC++ +  ++  +   M + G +P+ TT+ +LI+ +   G   EA EL   ++    I  
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587

Query: 509 D-TFKRLNRTFPLLDVYKEISHLATK 533
             T+  L +   + D   E + L  K
Sbjct: 588 TVTYTTLVKGLCMNDRISEATQLFMK 613



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 210/410 (51%), Gaps = 18/410 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PDV     LI  FCK  ++  AN++L+ +  RG   D+VTY+ +I  LC +  I  A +
Sbjct: 7   QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F  + +  C+P  I Y  L++     G+ + A+ L  EM       +    Q+      
Sbjct: 67  LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM-------LNDTSQY-----G 114

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C+P ++SY++++  L    + +E  +L  EM ++G+ P+V++Y+ LI   CR GK E 
Sbjct: 115 IKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEK 174

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +     + G+  D  +   LI   CK+G++  A E L+ MI  GC+ DIV Y+T++ 
Sbjct: 175 AKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIK 234

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK---- 398
             C      +A  +F  +  +GC P+  +Y T+   L  +G+   AL +  EML+     
Sbjct: 235 GLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRY 294

Query: 399 GI--EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           GI  +P  I+Y+ +I  LC+D   DEA  L  +M++    P VISY  +I GFC + +  
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWE 354

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           ++  +   M + G +P+ TT  +LI+ +   G   EA +L   ++    I
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 187/378 (49%), Gaps = 30/378 (7%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PDV T  ++I   C  G +  A ++ + +++  C   ++TY+ LI+           
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIK----------- 53

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C K  + +A Q   S++  GC+PD I+Y  L++ L   GK      L  EM
Sbjct: 54  -------GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106

Query: 256 ISR------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           ++         +P +V+YSI+I  LC+D + ++A ++ +  K +G+ PD  SY  LI  +
Sbjct: 107 LNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G+ + A    + M+  G   D+   + ++   CK G   +A E+ E +   GC  ++
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y+T+   L        A  +   M   G  PD I Y +L+  LC+ G ++ A+ L  +
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286

Query: 430 M--ESTRF----RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           M  ++ R+    +PT+ISY+III G CK RR +E+ E+   M  +G  P+  +Y  LI G
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346

Query: 484 IGYGGWRAEAMELANALV 501
               G   +A  L N ++
Sbjct: 347 FCLSGKWEKAKCLFNEML 364



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 180/383 (46%), Gaps = 67/383 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+   +E ++  GC PDVV CT L+K    + + +KA ++   ++K G
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 103 ------------------------------------------EPDVFAYNALISGFCKAN 120
                                                     +P+  +Y+ +I G CK  
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + + A ++   +++ G  PDV++Y  +I   C  G  + A  +F++++    +P V T++
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
           +LI     EG+  +A +LL+ M                 G+C    + +A Q    ++  
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS------RGLEPNVVTYSILISSLCRD 277
           GC PDV++Y  L++ L   G  +   +L  +M+S         +P+V++YSI+I  LC+ 
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A ++ +  K  G+ P+  SY  LI  +C+ G+L+ A    + M+  G   + V Y
Sbjct: 678 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737

Query: 338 NTILAAFCKNGNADQALEIFEKL 360
           + ++  FCK G  D+AL  F+K+
Sbjct: 738 SVMIHGFCKEGQIDKAL--FQKM 758



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 6/285 (2%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G QPDV +  +L+      GK  E  +L+  M+ RG   ++VTYS LI  LC   +  +A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD------GCLPDIVNY 337
             +  + K+ G  PDA +Y  L+   C+ G++++A+     M++D       C P +V+Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + I+   CK+   D+A E+F+++   G  P+V SY ++      SG   +A  + +EML 
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI  D  T + LI  LC++G V EA  LL  M        +++Y+ +I G C   RI+E
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  +  +M + GC+P+   Y  L++G+   G    A++L   +++
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 6/248 (2%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+  G++P+V T  +LI   C++GK  +A ++L    ++G   D  +Y  LI   C   R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD------VGCPPN 368
           +  A +    M   GC PD + Y T++   C+ G  + AL + +++ +      + C P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           + SY+ +   L     +  A  +  EM ++G+ PD I+Y SLI   CR G  ++A  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M     R  V + +++I   CK  ++ E+ E+L  M ++GC  +  TY  LI+G+    
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 489 WRAEAMEL 496
             +EA  L
Sbjct: 241 RISEATRL 248



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 6/219 (2%)

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+ PD  +   LI  +CK+G++  A E L+ M+  GC+ DIV Y+T++   C      +A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK----GI--EPDEITY 407
            ++F  +  +GC P+  +Y T+   L  +G    AL +  EML+     GI  +P  ++Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           + +I  LC+D   DEA  L  +M++    P VISY  +I GFC++ +  ++  +   M +
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G + + TT  +LI+ +   G   EA EL   ++    I
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 24/201 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI    + GK  E+   +E M+  GC P+ V  T L+K      + ++A ++   
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613

Query: 98  LEKYG-EPDVFAYNALISGFCKANQI----ELANKVLDRLRSRG--FSPDVVTYNIMIGS 150
           ++K G  PDV  Y  L+ G C+   I    EL  K+L      G  F PDV++Y+I+I  
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G  + A ++F ++      P VI+YT LI      G+ + A  L +EM        
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733

Query: 203 ---------GMCKKGMVGQAF 214
                    G CK+G + +A 
Sbjct: 734 AVTYSVMIHGFCKEGQIDKAL 754


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 245/463 (52%), Gaps = 27/463 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEIL 98
           F  L+    + G+  +    +E+M A   +P+VV    L++   + ER       V +++
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 99  EKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            + G   PD+  Y+ L+SG+CKA ++E + ++L  + SRG  PD + Y  ++ SLC    
Sbjct: 73  SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSAR 132

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A ++ ++++R  C PT+IT+  LI                   G C++  +  A   
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLIS------------------GCCREKNLEMADSL 174

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           ++ + + G + DV++YN L+  L   G+ +E E+L+  M + G  P+VV YS  +  LC+
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIV 335
            GK  DA  VL   ++    P+  +Y+ ++   CK G++D A+E ++ M S DGC  ++V
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++   CK G   +A  + E ++  GC P+V +Y+++ + L  +G    A+  + EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR-----PTVISYNIIILGFC 450
             +G +P+ +TY SL+  LC  G + EA  ++ +M S         P+V +YN +I G C
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  RI+++++    M  +GC P+  +Y  ++EG+   G   +A
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 205/397 (51%), Gaps = 29/397 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   +NAL++GF K  +     ++L+ + +R   P+VV+YN ++  LC       A   
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA--- 64

Query: 164 FDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            ++L+RD         P ++TY+ L+                   G CK G V ++ + +
Sbjct: 65  -EELVRDMISRGGRSTPDMVTYSTLLS------------------GYCKAGKVEESRELL 105

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + + SRG +PD + Y  ++ +L    +  E  +L+ EMI  G  P ++T++ LIS  CR+
Sbjct: 106 KEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCRE 165

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E A  +L+     G+  D  +Y+ L+   CK GRL  A + L+ M + GC PD+V Y
Sbjct: 166 KNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++ +   CK+G    A ++ E++ D    PNV +YNT+   L  SG    AL M+ +M S
Sbjct: 226 SSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285

Query: 398 K-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G   + + Y++++  LC+ G   EA  ++  M     RP V++Y+ ++ G CK  +I 
Sbjct: 286 SDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           E++E +  M  +GCKPN  TY  L+ G+   G  AEA
Sbjct: 346 EAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 188/362 (51%), Gaps = 23/362 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + K++    ++ +  E+L  +E M+  GC P ++    LI    +E+    A  +++ + 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G + DV  YN L+ G CKA +++ A ++L+R+++ G +PDVV Y+  +  LC  G + 
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +V +Q+   +  P V+TY  ++      G+ D A++++++M                
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA--------------- 284

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S GC  +V+ Y+ ++  L  +G+ +E   +M  M   G  P+VVTYS L++ LC+ G
Sbjct: 285 --SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-----ISDGCLPD 333
           K E+AV+ +R    +G  P+A +Y  L+   C  GRL  A   ++ M         C P 
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPS 402

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN ++   CK G  D AL+ F+++   GC P+  SY+T+   L  SG  ++A  ++S
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILS 462

Query: 394 EM 395
           E+
Sbjct: 463 EV 464



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 179/336 (53%), Gaps = 21/336 (6%)

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R  C P  +T+  L+                   G  K+G  G   + + ++ +R  QP+
Sbjct: 3   RTGCPPNSVTFNALVN------------------GFSKQGRPGDCERLLETMAARDIQPN 44

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRDGKTEDAVDV 286
           V+SYN LL  L  + +W E E+L+ +MISRG    P++VTYS L+S  C+ GK E++ ++
Sbjct: 45  VVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESREL 104

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L+    +GL PDA  Y  ++++ CK  RL  A+E L+ MI  GC P ++ +NT+++  C+
Sbjct: 105 LKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR 164

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N + A  + +K++  G   +V +YNT+   L  +G    A  ++  M + G  PD + 
Sbjct: 165 EKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+S +  LC+ G V +A  +L  M  +   P V++YN I+ G CK+ +I+ ++E++  M 
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284

Query: 467 EK-GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              GC  N   Y  +++G+   G   EA  +  A+ 
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 163/285 (57%), Gaps = 2/285 (0%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++  GC P+ +++N L+      G+  + E+L+  M +R ++PNVV+Y+ L+  LC+  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 280 TEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
             +A +++R    +G   TPD  +Y  L+S YCK G+++ + E L  +IS G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             ++A+ CK+    +ALE+ E++   GC P + ++NT+ S      +   A  ++ +M +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++ D +TYN+L+  LC+ G + EA  LL  M+++   P V++Y+  + G CK+ ++ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + +VL  M +    PN  TY  +++G+   G    A+E+   + S
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  PN VT++ L++   + G+  D   +L     + + P+  SY+ L+   CK  R   A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 319 IEFLDYMISDG--CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            E +  MIS G    PD+V Y+T+L+ +CK G  +++ E+ +++   G  P+   Y  + 
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           ++L  S     AL ++ EM+  G  P  IT+N+LIS  CR+  ++ A  LL  M ++  +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             V++YN ++ G CK  R+ E+ ++L  M   GC P+   Y   + G+   G   +A ++
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 497 ANALVSMH 504
              +   H
Sbjct: 245 LEQMRDSH 252


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 221/451 (49%), Gaps = 19/451 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI     AG+ +E+L     M  + C P V   T LI       +  +A+ +  
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  EP+V  Y  LI G CK N+++ A K+L  +  +G  P VVTYN +I   C  G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           MI+ AF++ D +  ++C P   TY  LI                   G+CKK  V +A  
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELI------------------CGLCKKRKVHKAMA 425

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R   P +I+YN L+     +   E   +L++ M   GL P+  TYS+ I +LC
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G+ E+A  +  + K KG+  +   Y  LI  YCK G++D+A   L+ M++D CLP+  
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK     +A  +  K+  +G  P V +Y  +   +   G    AL + + M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +PD  TY + +      GM++E   ++  M      P +++Y ++I G+ +    
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           + + + L  M + GCKP+     +LI+ + +
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 228/480 (47%), Gaps = 18/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  ++    + G   E+  +   +V  G  PD    T LI    + +  + A  V  I+ 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +  +Y  LI G C+A +I  A K+   +      P V TY ++I +L   G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+++    C+P V TYT+LI     E + D+A K+L EM                
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK+GM+  AF+ +  +ES  C P+  +YN L+  L    K  +   L+ +M+ R L 
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++TY+ LI   C+    E A  +L    E GL PD ++Y   I   CK+GR++ A   
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D + + G   + V Y  ++  +CK G  D A  + E++ +  C PN  +YN +   L  
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 A  ++++ML+ G++P  +TY  LI  + +DG  D A+ +   M S  ++P V +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y   +  +     + E  +V+A M E+G  P+  TY +LI+G    G    A +    +V
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 205/409 (50%), Gaps = 18/409 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L     P+++ +NA+++G+CK   +  A     ++   G  PD  TY  +I   C  
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             +++A++VF  + +  C+   ++YT LI                   G+C+ G + +A 
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIH------------------GLCEAGRINEAL 284

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    +    C P V +Y +L+  L   G+  E   L  EM  +G EPNV TY++LI  L
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++ K ++A  +L    EKGL P   +Y+ LI  YCK+G +D A E LD M S+ C P+ 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++   CK     +A+ +  K+ +    P++ +YN++        D   A  ++S 
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G+ PD+ TY+  I  LC++G V+EA  L   +++   +   + Y  +I G+CK  +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I+ +  +L  M    C PN  TY +LIEG+       EA  L   +++M
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 237/516 (45%), Gaps = 71/516 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  D++   ++ M +N C P+     +LI    ++RK +KA+ ++ ++L
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P +  YN+LI G CK N +E A ++L  +   G  PD  TY++ I +LC  G +E
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD +     K   + YT LI      G+ D A  LL+ M                
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  + +A   V  + + G +P V++Y +L+  +L  G ++   K+   M+S G +
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V TY+  + +    G  E+  DV+    E+G+ PD  +Y  LI  Y + G    A +F
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQ------------------ALEIFEKLSDV 363
           L  M+  GC P +   + ++          +                  AL++FEK+ + 
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC  +VS Y  + +          A G++  M  +G+ P E  YNSL+ C C+ G+  EA
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791

Query: 424 V---------GLLVDMESTR--------------------------FRPTVISYNIIILG 448
           V         GLL  +ES +                          +    +++ ++I G
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             K   ++E  E++  M EKGC+PN  TY LLIEG+
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 181/352 (51%), Gaps = 10/352 (2%)

Query: 158 ESAFKVFDQL-LRDNCKPTVITYT----ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
           ++A   F+ + LR   K  V +Y+    ILI+A +L G  +K +++      C    V  
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL-GVAEK-IRISMIKSCCSIEDVLF 139

Query: 213 AFQFVRSLESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +  R + + G    +P +  YN +L +L      +E + +  E+++  + PN+ T++ 
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++  C+ G   +A        + GL PD ++Y  LI  +C++  +D A E    M   G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C  + V+Y  ++   C+ G  ++AL++F  +++  C P V +Y  +  AL  SG K+ AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + +EM  KG EP+  TY  LI  LC++  +DEA  +L +M      P+V++YN +I G+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK   I+++ E+L  M    C PN  TY  LI G+       +AM L N ++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 236/459 (51%), Gaps = 23/459 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   +  M  +GC P+ ++   LI    Q+ + ++A++++E +   G  PDV  +N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK N+I  A K++DR+  RGF PD +TY  ++  LC  G +  A K+   L++  C
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIPC 351

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
               I  T LI   ++ GQ  +A   L+E                 ++ + G QPD+ +Y
Sbjct: 352 PNNAILNT-LINGYVMSGQLKEAQSFLNE-----------------TMINFGFQPDIFTY 393

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+L+  L   G       L+ EM  RG EPNV+TY+IL++ LC+ G  E+A  VL     
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +GLT ++  Y+ LI A C+  ++ +A+  L  M + GC PD+  YN+++   CK    D+
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +   G   N  +YNT+  AL   G   +AL ++++ML +G   D+ITYN LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C+ G +++ + L   M         IS NI+I G CK  +++ + E L     +G  P
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +  TY  ++ G+   G   EA+ L + L  +  +  D F
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRL-QVEGVRPDAF 671



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 220/477 (46%), Gaps = 50/477 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    +  +  E+L  +E M   GC PDV     +I    +  K + A ++++ +L
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVL----------------------------- 129
            +   PD   Y  L+ G C+  ++  A K+L                             
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQS 375

Query: 130 ---DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
              + + + GF PD+ TYNI++  LC  G +  A  + +++ R  C+P VITY IL+   
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G  ++A  +L EM                  +C+K  V  A   +  + ++GC+PD+
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN L+  L  + + +E  +L   M+  G   N VTY+ LI +L R G  + A+ ++  
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              +G T D  +Y+ LI A+CK G ++  +E  + MI DG   D ++ N ++   CK G 
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A E      + G  P++ +YN++ + L   G    AL +   +  +G+ PD  TYN+
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            IS  C++GMV++A           F P+ +++N+++    K      +  VL  ++
Sbjct: 676 FISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 211/427 (49%), Gaps = 25/427 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           ++K + +  +  +A+R++  +      EP   +Y+ ++      N  ++A  V   + S+
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G SP V T+ I++ +LC    ++SA  +   + +  C P  I Y  LI A   + Q  +A
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           +KLL+EM             FV      GC PDV ++N ++  L  + K  +  KL+  M
Sbjct: 273 LKLLEEM-------------FV-----MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + RG  P+ +TY  L+  LCR GK  +A  +L     K   P+    + LI+ Y   G+L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI----KIPCPNNAILNTLINGYVMSGQL 370

Query: 316 DLAIEFL-DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
             A  FL + MI+ G  PDI  YN ++   CK G+   A ++  ++S  GC PNV +Y  
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAI 430

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + + L  +G    A  ++ EM ++G+  + + YN LI  LCR   V  A+ LL +M +  
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +P + +YN +I G CK  RI+E+  +   M   G   N  TY  LI  +   G   +A+
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550

Query: 495 ELANALV 501
            L N ++
Sbjct: 551 TLVNDML 557



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 68/330 (20%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGL------------------------------- 260
           Y + +  L  +GK++  +KL+ +M   G+                               
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 261 -----EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                EP   +Y +++  L      + A +V      KG++P  +++  ++ A C    +
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A   L  M   GC+P+ + Y T++ A  +     +AL++ E++  +GC P+V ++N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD------ 429
              L        A  ++  ML +G  PD +TY  L+  LCR G ++EA  +L+       
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN 354

Query: 430 --------------------------MESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
                                     M +  F+P + +YNI++ G CK   ++ + +++ 
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            M  +GC+PN  TY +L+ G+   G   EA
Sbjct: 415 EMSRRGCEPNVITYAILVNGLCKAGLLEEA 444



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 1/232 (0%)

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DY 324
            Y + I+ L   GK +    +L   KE+G+      +  ++  Y K G+   AI  L D 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
                C P   +Y+ +L           A  +F  +   G  P V ++  +  AL    +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ +M   G  P+ I Y +LI  L +   V EA+ LL +M      P V ++N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I G CK  +I+++ +++  M  +G  P+  TY  L+ G+   G   EA ++
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 36/217 (16%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R   +KG       Y   I+     G+  L  + L  M  +G +     +  I+  + K 
Sbjct: 101 RVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKA 160

Query: 348 GNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           G   QA+ +   +  V  C P   SY+ +   L +      A  +  +MLSKG+      
Sbjct: 161 GQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS----- 215

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
                                         PTV ++ I++   C    ++ +  +L  M 
Sbjct: 216 ------------------------------PTVFTFGIVMKALCMFNEVDSACSLLRDMT 245

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + GC PN   Y  LI  +      +EA++L   +  M
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 233/464 (50%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A GC P V+    ++    ++ +  +A+R  E ++K   P++  Y
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTY 410

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   CKA ++E A KV D ++  G  P+V+T NIMI  LC    ++ A  +F+ +  
Sbjct: 411 NVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNH 470

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +T+  LI     +G+ D A +L ++M                    K G    
Sbjct: 471 KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKED 530

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +  RGC PD+   N  +  +   G+  +G  L  E+ SRG  P+V++YSILI 
Sbjct: 531 GHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIH 590

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +  ++  A KE+G   D ++Y+  I  +CK G+++ A + L+ M + G  P
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIM 710

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   ++EA+    +M++ +  P  I+Y+I+I G C+ 
Sbjct: 711 EELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRV 770

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M ++G KPN  TY  +I G+   G  AEA  L
Sbjct: 771 RKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 211/446 (47%), Gaps = 20/446 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           +AGK D +  F   + ++G  PD V  T +I    +  + ++AV + E +E+    P  +
Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY 339

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN +I G+  A + + A  +L+R ++RG  P V+ YN ++  L  +G +  A + F+++
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +D   P + TY +LI                    +CK G V  AF+   +++  G  P
Sbjct: 400 KKD-AAPNLSTYNVLIDM------------------LCKAGEVEAAFKVRDAMKEAGLFP 440

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++ N+++  L    K +E   +   M  +   P+ VT+  LI  L + G+ +DA  + 
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +    P+A  Y  LI ++ K GR +   +    MI  GC PD+   N  +    K 
Sbjct: 501 EQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +   +FE++   G  P+V SY+ +   L  +G       +   M  +G   D   Y
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+ I   C+ G V++A  LL +M++   +PTV++Y  +I G  K  R++E+  +      
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 680

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
            G + N   Y  LI+G G  G   EA
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEA 706



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 18/406 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVM 95
           E  F  LI    + G+ D++    E M+ +   P+ V+ T LIK FF+  RK +      
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++ +   PD+   NA +    KA +      + + ++SRGF PDV++Y+I+I  L   G
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
                +++F  +    C      Y   I      G+ +KA +LL+EM             
Sbjct: 597 FARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYG 656

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+ K   + +A+      +S G + +V+ Y+ L+     +G+ +E   +M E++ +
Sbjct: 657 SVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 716

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL PNV T++ L+ +L +  +  +A+   +  K    TP+  +Y  LI+  C+  + + A
Sbjct: 717 GLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKA 776

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
             F   M   G  P+ + Y T++A   K GN  +A  +FE+    G  P+ +SYN +   
Sbjct: 777 FVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           L  S   + A  +  E   KG      T  +L+  L +D  +++A 
Sbjct: 837 LSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAA 882



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 187/432 (43%), Gaps = 31/432 (7%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY++L+    K  + +   ++L  +   GF P   T   +I S      +   F +   +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +   +P    YT LI A     ++D  + L  +M                  +  G + 
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM------------------QELGYEV 231

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V  +  ++R     G+ +    L+ EM S  L  ++V Y++ I    + GK + A    
Sbjct: 232 SVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFF 291

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  GL PD  +Y  +I   CK  RLD A+E  + M  +  +P    YNT++  +   
Sbjct: 292 HEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSA 351

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A  + E+    GC P+V +YN + + L   G    AL    EM  K   P+  TY
Sbjct: 352 GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTY 410

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LC+ G V+ A  +   M+     P V++ NI+I   CK ++++E+  +   M  
Sbjct: 411 NVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNH 470

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL----------ANALVSMHAISRDTFKRLNRT 517
           K C P+E T+  LI+G+G  G   +A  L           NA+V    I   +F +  R 
Sbjct: 471 KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIK--SFFKCGRK 528

Query: 518 FPLLDVYKEISH 529
                ++KE+ H
Sbjct: 529 EDGHKIFKEMIH 540



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 11/317 (3%)

Query: 210 VGQAFQFVRSLESRGCQ---PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           V QA  + R  E +  Q   P+  +Y+ LL  +    K++  E+++ EM   G  P+  T
Sbjct: 108 VNQAISYFRWTERKTDQALCPE--AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKT 165

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
              LI S  +  K  +  D+++  ++    P   +Y  LI A       D+ +     M 
Sbjct: 166 CIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQ 225

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G    +  + T++  F + G  D AL + +++       ++  YN        +G   
Sbjct: 226 ELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVD 285

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A     E+ S G+ PD++TY S+I  LC+   +DEAV +   ME  R  P   +YN +I
Sbjct: 286 MAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMI 345

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           +G+    + +E+  +L     +GC P+   Y  ++  +G  G       L  AL +   +
Sbjct: 346 MGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKG------RLGEALRTFEEM 399

Query: 507 SRDTFKRLNRTFPLLDV 523
            +D    L+    L+D+
Sbjct: 400 KKDAAPNLSTYNVLIDM 416


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 236/459 (51%), Gaps = 23/459 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D +   +  M  +GC P+ ++   LI    Q+ + ++A++++E +   G  PDV  +N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK N+I  A K++DR+  RGF PD +TY  ++  LC  G +  A K+   L++  C
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIPC 351

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
               I  T LI   ++ GQ  +A   L+E                 ++ + G QPD+ +Y
Sbjct: 352 PNNAILNT-LINGYVMSGQLKEAQSFLNE-----------------TMINFGFQPDIFTY 393

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+L+  L   G       L+ EM  RG EPNV+TY+IL++ LC+ G  E+A  VL     
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +GLT ++  Y+ LI A C+  ++ +A+  L  M + GC PD+  YN+++   CK    D+
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +   G   N  +YNT+  AL   G   +AL ++++ML +G   D+ITYN LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C+ G +++ + L   M         IS NI+I G CK  +++ + E L     +G  P
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +  TY  ++ G+   G   EA+ L + L  +  +  D F
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRL-QVEGVRPDAF 671



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 211/427 (49%), Gaps = 25/427 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           ++K + +  +  +A+R++  +      EP   +Y+ ++      N  ++A  V   + S+
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G SP V T+ I++ +LC    ++SA  +   + +  C P  I Y  LI A   + Q  +A
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           +KLL+EM             FV      GC PDV ++N ++  L  + K  +  KL+  M
Sbjct: 273 LKLLEEM-------------FV-----MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + RG  P+ +TY  L+  LCR GK  +A  +L     K   P+    + LI+ Y   G+L
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI----KIPCPNNAILNTLINGYVMSGQL 370

Query: 316 DLAIEFL-DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
             A  FL + MI+ G  PDI  YN ++   CK G+   A ++  ++S  GC PNV +Y  
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAI 430

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + + L  +G    A  ++ EM ++G+  + + YN LI  LCR   V  A+ LL +M +  
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +P + +YN +I G CK  RI+E+  +   M   G   N  TY  LI  +   G   +A+
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550

Query: 495 ELANALV 501
            L N ++
Sbjct: 551 TLVNDML 557



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 182/372 (48%), Gaps = 19/372 (5%)

Query: 43  LIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           LI     +G+  E+  F+ E+M+  G +PD+     L+    +E   + A  ++  + + 
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G EP+V  Y  L++G CKA  +E A  VL  + +RG + + V YN +I +LC +  +  A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
             +  ++    CKP + TY  LI       + D+A +L   M                  
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + ++G   +A   V  +  RGC  D I+YN L++    +G  E+G +L  +MI  GL  +
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            ++ +I+I+ LC+ GK ++A + LR A  +G  PD  +Y+ +++  CK GR+  A+   D
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            +  +G  PD   YNT ++  CK G  + A   F +  + G  P+  ++N +   L    
Sbjct: 660 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQS 719

Query: 384 DKIRALGMISEM 395
           ++     ++ E+
Sbjct: 720 NQENNFFVLDEL 731



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 68/330 (20%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGL------------------------------- 260
           Y + +  L  +GK++  +KL+ +M   G+                               
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 261 -----EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                EP   +Y +++  L      + A +V      KG++P  +++  ++ A C    +
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A   L  M   GC+P+ + Y T++ A  +     +AL++ E++  +GC P+V ++N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD------ 429
              L        A  ++  ML +G  PD +TY  L+  LCR G ++EA  +L+       
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN 354

Query: 430 --------------------------MESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
                                     M +  F+P + +YNI++ G CK   ++ + +++ 
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            M  +GC+PN  TY +L+ G+   G   EA
Sbjct: 415 EMSRRGCEPNVITYAILVNGLCKAGLLEEA 444



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 1/232 (0%)

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DY 324
            Y + I+ L   GK +    +L   KE+G+      +  ++  Y K G+   AI  L D 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
                C P   +Y+ +L           A  +F  +   G  P V ++  +  AL    +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ +M   G  P+ I Y +LI  L +   V EA+ LL +M      P V ++N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I G CK  +I+++ +++  M  +G  P+  TY  L+ G+   G   EA ++
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 36/217 (16%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R   +KG       Y   I+     G+  L  + L  M  +G +     +  I+  + K 
Sbjct: 101 RVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKA 160

Query: 348 GNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           G   QA+ +   +  V  C P   SY+ +   L +      A  +  +MLSKG+      
Sbjct: 161 GQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS----- 215

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
                                         PTV ++ I++   C    ++ +  +L  M 
Sbjct: 216 ------------------------------PTVFTFGIVMKALCMFNEVDSACSLLRDMT 245

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + GC PN   Y  LI  +      +EA++L   +  M
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 236/471 (50%), Gaps = 4/471 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKF+++   I  M++ G  PD    +K+I       K  KA ++ + +++ G  PDV+ Y
Sbjct: 101 GKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTY 160

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             L+  FCK   IE A    D ++  G +P+VVTY  +I +      +  A ++F+ +L 
Sbjct: 161 TTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS 220

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           + C P ++TYT LI      G+T+KA ++   M   K  +      F R ++S   +P+V
Sbjct: 221 NGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYF-RIVDSELKEPNV 279

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+  L    K +E   L+  M   G EPN + Y  LI   C+ GK ++A +V   
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK 339

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G +P+ Y+Y  LI    KD RLDLA++ L  M+ + C P++V Y  ++   CK G 
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  +   + + GC PNV +Y  M      +G   R L ++  M SKG  P+ ITY  
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++D+A  LL +M+ T +   +  Y  +I GF  +     S+ +LA + E G
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDG 517

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 520
             P    Y LLI+     G    A+EL   L S  A  ++T+  L  +  L
Sbjct: 518 SVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTL 568



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 226/487 (46%), Gaps = 54/487 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF-------------FQER 86
           F  L+    R+G +  +   ++ MV  G +P  V+   LI                  ER
Sbjct: 14  FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAER 73

Query: 87  KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
             N+ + +  +L K    +           C   + E A  V+  + S+GF PD  TY+ 
Sbjct: 74  AYNEMLEMGVVLNKVNVCN------FTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSK 127

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +IG LC+   +E AF++F ++ R+   P V TYT L+                     CK
Sbjct: 128 VIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDR------------------FCK 169

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G++ QA  +   ++  GC P+V++Y  L+   L   K     ++   M+S G  PN+VT
Sbjct: 170 VGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVT 229

Query: 267 YSILISSLCRDGKTE-----------DAVDV------LRAAKEKGLTPDAYSYDPLISAY 309
           Y+ LI   C+ G+TE           D VD+       R    +   P+  +Y  L+   
Sbjct: 230 YTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGL 289

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK  ++  A + L+ M  +GC P+ + Y+ ++  FCK G  D+A E+F K+   GC PNV
Sbjct: 290 CKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNV 349

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y+++   L+       AL ++++ML     P+ + Y  ++  LC+ G  DEA  L++ 
Sbjct: 350 YTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLM 409

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           ME     P V++Y  +I GF K  R++  +E+L  M  KGC PN  TY +LI      G 
Sbjct: 410 MEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGL 469

Query: 490 RAEAMEL 496
             +A +L
Sbjct: 470 LDDAHKL 476



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 29/368 (7%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           + G  P  + +N ++ + C  G    A+K+  +++    +P  + Y ILI   +   +  
Sbjct: 4   TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILI-GGICSTEDL 62

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
            +M++           +G A +    +   G   + ++     R L  +GK+E+   ++ 
Sbjct: 63  PSMEV-----------IGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIR 111

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM+S+G  P+  TYS +I  LC   K E A  + +  K  G+TPD Y+Y  L+  +CK G
Sbjct: 112 EMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVG 171

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            ++ A  + D M  DGC P++V Y  ++ A+ K     +A EIFE +   GC PN+ +Y 
Sbjct: 172 LIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYT 231

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGI-----------------EPDEITYNSLISCLCR 416
            +      +G+  +A  + + M +  +                 EP+ +TY +L+  LC+
Sbjct: 232 ALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCK 291

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
              V EA  LL  M      P  I Y+ +I GFCK  +++E+ EV   M   GC PN  T
Sbjct: 292 AHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYT 351

Query: 477 YVLLIEGI 484
           Y  LI+ +
Sbjct: 352 YSSLIDKL 359



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 29/275 (10%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + GC P  + +N L+      G +    KL+ +M+  G +P  V Y+ILI  +C    TE
Sbjct: 4   TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGIC---STE 60

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           D    L + +  GL   AY                      + M+  G + + VN     
Sbjct: 61  D----LPSMEVIGLAERAY----------------------NEMLEMGVVLNKVNVCNFT 94

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C  G  ++A  +  ++   G  P+ S+Y+ +   L ++    +A  +  EM   GI 
Sbjct: 95  RCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIT 154

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  TY +L+   C+ G++++A     +M+     P V++Y  +I  + KTR+++ + E+
Sbjct: 155 PDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEI 214

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              M   GC PN  TY  LI+G    G   +A ++
Sbjct: 215 FEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 56/265 (21%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI + F+  + D +L  +  M+ N C P+VV+ T+++    +  K+++A R+M ++E
Sbjct: 352 YSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMME 411

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y A+I GF KA +++   ++L  + S+G +P+ +TY ++I   C+ G+++
Sbjct: 412 EKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLD 471

Query: 159 SAFKVFDQ---------------------------------LLRDNCKPTVITYTILIQA 185
            A K+ ++                                 L  D   P +  Y +LI  
Sbjct: 472 DAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDN 531

Query: 186 TMLEGQTDKAMKLLDEMG-------------------MCKKGMVGQAFQFVRSLESRGCQ 226
            +  G+ + A++L +E+                     CK   V +AF+    +  RG  
Sbjct: 532 FIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACK---VDKAFKLYSDMTRRGFV 588

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKL 251
           P++     L++ LL +GKWEE  +L
Sbjct: 589 PELSMLVCLIKGLLRVGKWEEALQL 613


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 240/478 (50%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K + +  F+  M   G  PDVV    LI  + ++    +A  +M+ +   G +P VF YN
Sbjct: 112 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 171

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A+I+G CK  +   A  VLD +   G SPD  TYNI++   C    +  A ++FD++   
Sbjct: 172 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 231

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +++++ LI      G  D+A+K   +M                 G C+ G++ +A
Sbjct: 232 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  +GC  DV++YN +L  L       E ++L TEM  RG+ P+  T++ LI+ 
Sbjct: 292 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             +DG    AV +     ++ L PD  +Y+ LI  +CK   ++   E  + MIS    P+
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y  ++  +C  G   +A  +++++ + G    + + NT+      +G+ ++A   +S
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            ML KGI PD ITYN+LI+   ++  +D A  L+  ME++   P VI+YN+I+ GF +  
Sbjct: 472 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           R+ E+  ++  M E+G  P+ +TY  LI G        EA  + + ++    +  D F
Sbjct: 532 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 589



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 230/464 (49%), Gaps = 20/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L++   +A K  E       + + G    +  C  L+    +    + A  + + + 
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +V+  N +I+  CK  +IE     L  +  +G  PDVVTYN +I + C +G++E
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF++ D +     KP V TY  +I      G+  +A  +LDEM   K GM         
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM--LKIGM--------- 198

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                   PD  +YN+LL          + E++  EM S+G+ P++V++S LI  L ++G
Sbjct: 199 -------SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + A+   R  K  GL PD   Y  LI  +C++G +  A++  D M+  GC+ D+V YN
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           TIL   CK     +A E+F ++++ G  P+  ++ T+ +     G+  +A+ +   M+ +
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            ++PD +TYN+LI   C+   +++   L  DM S R  P  ISY I+I G+C    ++E+
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME-LANALV 501
             +   M EKG +    T   +++G    G   +A E L+N L+
Sbjct: 432 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 475



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 60  IESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGF 116
           +ES+V     C  + ++   L++ + Q RK  +      +L+  G    + A N+L+ G 
Sbjct: 13  VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 72

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
            K   ++LA ++   +   G   +V T NIMI +LC    IE+       +      P V
Sbjct: 73  VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 132

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  LI A                   C++G++ +AF+ + S+  +G +P V +YN ++
Sbjct: 133 VTYNTLINA------------------YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 174

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L   GK+   + ++ EM+  G+ P+  TY+IL+   CR+    DA  +      +G+ 
Sbjct: 175 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 234

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  S+  LI    K+G LD A+++   M + G  PD V Y  ++  FC+NG   +AL++
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 294

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++ + GC  +V +YNT+ + L        A  + +EM  +G+ PD  T+ +LI+   +
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           DG +++AV L   M     +P V++YN +I GFCK   + +  E+   M  +   PN  +
Sbjct: 355 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414

Query: 477 YVLLIEGIGYGGWRAEAMELANALV 501
           Y +LI G    G  +EA  L + +V
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMV 439



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 18/453 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G  +E+   ++SM   G KP V     +I    +  K  +A  V++ + 
Sbjct: 135 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 194

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN L+   C+ + +  A ++ D + S+G  PD+V+++ +IG L   G ++
Sbjct: 195 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 254

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K F  +      P  + YTILI      G   +A+K+ DEM                
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+ M+ +A +    +  RG  PD  ++  L+      G   +   L   MI R L+
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+ LI   C+  + E   ++      + + P+  SY  LI+ YC  G +  A   
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M+  G    I+  NTI+  +C+ GNA +A E    +   G  P+  +YNT+ +    
Sbjct: 435 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 494

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             +  RA  ++++M + G+ PD ITYN +++   R G + EA  +++ M      P   +
Sbjct: 495 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 554

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           Y  +I G      + E+  V   M ++G  P++
Sbjct: 555 YTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 208/423 (49%), Gaps = 26/423 (6%)

Query: 86  RKSNKAVRVMEILEK----YGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           RKS   V  +EI+E     YG    +   ++ L+  + +A ++    +    L+S+G   
Sbjct: 3   RKS--GVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 60

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
            +   N ++G L   G ++ A++++ +++R   +  V T  I+I A              
Sbjct: 61  SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA-------------- 106

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +CK   +     F+  +E +G  PDV++YN L+      G  EE  +LM  M  +G
Sbjct: 107 ----LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+P V TY+ +I+ LC+ GK   A  VL    + G++PD  +Y+ L+   C++  +  A 
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              D M S G +PD+V+++ ++    KNG  DQAL+ F  + + G  P+   Y  +    
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +G    AL +  EML +G   D +TYN++++ LC++ M+ EA  L  +M      P  
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            ++  +I G+ K   +N+++ +   M ++  KP+  TY  LI+G   G    +  EL N 
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 500 LVS 502
           ++S
Sbjct: 403 MIS 405


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 246/524 (46%), Gaps = 66/524 (12%)

Query: 15  RVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
           R++    A TRP             +  L+    R G   ++   +E+M ANG +PD+  
Sbjct: 264 RMKKDGVAPTRPT------------YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWT 311

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRL 132
              L     Q  K ++A R+ + +E+ G   PDV  YN L     K      A ++L+ +
Sbjct: 312 YNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM 371

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R +G    +VT+NI+I  LC  G +E A    +++  D   P VITY  LI A    G  
Sbjct: 372 REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNI 431

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            KA  L+DEM                  +CK+    +A   ++S   RG  PD +SY  +
Sbjct: 432 AKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTV 491

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +         E   +L  EMI + L P++ TY+ LI  L R G+ ++A+D L    EKGL
Sbjct: 492 MAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL 551

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  +Y+ +I AYCK+G L+ A +F + M+ +   PD+V  NT++   C NG  D+AL+
Sbjct: 552 VPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALK 611

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +FE   + G   +V +YNT+   +   GD   AL   ++M ++G++PD  TYN ++S L 
Sbjct: 612 LFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALS 671

Query: 416 RDGMVDEAVGLLVDM----------ESTRFRPTVI------------------------- 440
             G  +EA  +L  +           S   +P+ +                         
Sbjct: 672 EAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASE 731

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +Y  ++ G C + +  E+  +L  M +KG   + +TY+ L+EG+
Sbjct: 732 AYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 231/484 (47%), Gaps = 54/484 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+      G   ++L  + +M   G  PD V    L+    ++    +A  ++  ++
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P    YN L+S + +   I+ A KV++ + + GF PD+ TYN++   LC  G ++
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326

Query: 159 SAFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
            AF++ D++ R     P V+TY  L  A      +  A++LL+EM               
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK G +  A   +  +   G  PDVI+YN L+      G   +   LM EM+ RGL
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD-------- 312
           + +  T + ++ +LC++ + E+A  +L++  ++G  PD  SY  +++AY K+        
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506

Query: 313 ---------------------------GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
                                      GRL  AI+ L+ ++  G +PD   YN I+ A+C
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G+ + A +   K+ +    P+V + NT+ + L  +G   +AL +    + KG + D I
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN+LI  +C+DG VD A+    DME+   +P   +YN+++    +  R  E+  +L  +
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 466 FEKG 469
            E G
Sbjct: 687 AESG 690



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 209/450 (46%), Gaps = 25/450 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIEL 124
           G  P   +    +  + + R  + A +++  L +     P + A NA++S   ++     
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS- 184

Query: 125 ANKVLDRLRS---RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
               LD  RS       P+  T+N+++ + CS+G +  A      +      P  +TY  
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNT 244

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L+ A                   C+KGM+G+A   +  ++  G  P   +YN L+     
Sbjct: 245 LLNA------------------HCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYAR 286

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAY 300
           +G  ++  K++  M + G EP++ TY++L + LC+ GK ++A  +    +  G L PD  
Sbjct: 287 LGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVV 346

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ L  A  K      A+  L+ M   G    +V +N ++   CK+G  + AL    K+
Sbjct: 347 TYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKM 406

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +D G  P+V +YNT+  A   +G+  +A  ++ EM+ +G++ D  T N+++  LC++   
Sbjct: 407 ADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRY 466

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA GLL       F P  +SY  ++  + K      ++ +   M EK   P+ +TY  L
Sbjct: 467 EEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRDT 510
           I+G+   G   EA++  N L+    +  DT
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEKGLVPDDT 556



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 204/467 (43%), Gaps = 90/467 (19%)

Query: 49  RAGKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           +AGK DE+    + M   G   PDVV    L    F+ R S+ A+R++E + + G +  +
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N +I G CK  ++E A   L+++   G +PDV+TYN +I + C  G I  A+ + D+
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 167 LLRDNCK-----------------------------------PTVITYTILIQATMLEGQ 191
           ++R   K                                   P  ++Y  ++ A   E  
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           ++ A++L DEM                 G+ + G + +A   +  L  +G  PD  +YN+
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++      G  E   +   +M+    +P+VVT + L++ LC +GK + A+ +  +  EKG
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D  +Y+ LI   CKDG +D A+ F   M + G  PD   YN +L+A  + G  ++A 
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680

Query: 355 EIFEKLSDVGC-----------PPNV------------------------SSYNTMFSAL 379
            +  KL++ G            P +V                         +Y  + + L
Sbjct: 681 NMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGL 740

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-RDGMVDEAVG 425
            +SG    A  ++ EM+ KG+  D  TY +L+  L  R   +  AVG
Sbjct: 741 CTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHAVG 787



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 19/244 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +T +  +I    + G  + +  F   MV N  KPDVV C  L+       K +KA+++ E
Sbjct: 555 DTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE 614

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +EK  + DV  YN LI   CK   ++ A      + +RG  PD  TYN+++ +L   G
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             E A  +  +L          +  +L  +++ E ++ K  K  +E     +    +A  
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEA-- 732

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                           Y  L+  L   G+++E + ++ EM+ +G+  +  TY  L+  L 
Sbjct: 733 ----------------YTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLV 776

Query: 276 RDGK 279
           +  K
Sbjct: 777 KRQK 780


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 241/485 (49%), Gaps = 33/485 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   E+L  +  M   GC P+VV    L+  FF+  + + A R++ ++ + G +P++  +
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF 263

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N++++G CKA ++E A KV D +   G +PD V+YN ++G  C  G    A  VF ++ +
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+T+T LI      G  ++A+ L+ +M                 G CKKG +  
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   VR ++    +P V+ YN L+     +G+ +E  +L+ EM ++GL+P+VVTYS +IS
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 443

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           + C++  T  A ++ +   EKG+ PDA +Y  LI   C + RL  A      MI  G  P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D   Y +++   CK GN + AL + +K+   G  P+V +Y+ + + L  S   + A  ++
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563

Query: 393 SEMLSKGIEPDEITYNSLISC---------------LCRDGMVDEAVGLLVDMESTRFRP 437
            ++  +   P    Y++L+ C                C  G+++EA  +   M    +  
Sbjct: 564 FKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 623

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
               Y+++I G C+   + +++     M + G  PN T+ + LI G+   G   EA ++ 
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683

Query: 498 NALVS 502
             L++
Sbjct: 684 QQLLN 688



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 220/425 (51%), Gaps = 19/425 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F +SM+++G  P+V     L++         +A+ ++  +   G  P+V  YN L++ F 
Sbjct: 177 FFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 236

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +A +++ A +++  +R  G  P++VT+N M+  +C  G +E A KVFD+++R+   P  +
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV 296

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y  L+                   G CK G   +A      +  +G  PDV+++  L+ 
Sbjct: 297 SYNTLVG------------------GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIH 338

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            +   G  E    L+ +M  RGL+ N VT++ LI   C+ G  +DA+  +R  K+  + P
Sbjct: 339 VMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
               Y+ LI+ YC  GR+D A E L  M + G  PD+V Y+TI++A+CKN +   A E+ 
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +++ + G  P+  +Y+++   L        A  +   M+  G++PDE TY SLI   C++
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V+ A+ L   M      P V++Y+++I G  K+ R  E+ ++L  ++ +   P  T Y
Sbjct: 519 GNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKY 578

Query: 478 VLLIE 482
             L+ 
Sbjct: 579 DALMH 583



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 203/410 (49%), Gaps = 18/410 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V AYNA++     A+ +  A +  D + S G +P+V TYNI++ +LC RG  + A  +
Sbjct: 154 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +    C P V+TY  L+ A    G+ D A +L+  M                 GMCK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A +    +   G  PD +SYN L+      G   E   +  EM  +G+ P+VVT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ LI  +C+ G  E AV ++R  +E+GL  +  ++  LI  +CK G LD A+  +  M 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                P +V YN ++  +C  G  D+A E+  ++   G  P+V +Y+T+ SA   + D  
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  +ML KG+ PD ITY+SLI  LC +  + +A  L  +M     +P   +Y  +I
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G CK   +  ++ +   M + G  P+  TY +LI G+       EA +L
Sbjct: 513 DGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 19/346 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ P V+ YN ++ +L S   + SA + FD +L D   P V TY IL++A          
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRA---------- 199

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C +G   +A   +R +   GC P+V++YN L+      G+ +  E+L+  M
Sbjct: 200 --------LCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              GL+PN+VT++ +++ +C+ GK EDA  V      +GL PD  SY+ L+  YCK G  
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+     M   G +PD+V + +++   CK GN ++A+ +  ++ + G   N  ++  +
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G    AL  +  M    I+P  + YN+LI+  C  G +DEA  LL +ME+   
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +P V++Y+ II  +CK    + + E+   M EKG  P+  TY  LI
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 195/467 (41%), Gaps = 68/467 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  ++    +AGK +++    + MV  G  PD V    L+  + +   S++A+ V  E+ 
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PDV  + +LI   CKA  +E A  ++ ++R RG   + VT+  +I   C +G ++
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A      + +   KP+V+ Y  LI    + G+ D+A +LL EM                
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              CK      AF+  + +  +G  PD I+Y+ L+R L    +  +   L   MI  GL+
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY+ LI   C++G  E A+ +     + G+ PD  +Y  LI+   K  R   A + 
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 322 LDYMISDG------------------------------CLPDIVN--------------- 336
           L  +  +                               C+  ++N               
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622

Query: 337 -----YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+ +G  + A  +
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQV 682

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           I ++L+     D     +LI     +G VD  + +L  M      P+
Sbjct: 683 IQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 261/520 (50%), Gaps = 25/520 (4%)

Query: 1   QSTVVSCINPKSNERVRVSSSAETRPN----THLLSFDVK--ETQFMKLIKRSFRAGKFD 54
           Q T+++C N   N  VR  SS   R +    T  +   VK     F  LI  S    +F 
Sbjct: 156 QPTLLTC-NTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFG 214

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALI 113
           E++  +  M   GC PD +    ++    ++ + N+A  ++  ++  G  P+   +N L+
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G C+   ++ A  V++ +      PD  TYN+MI   C +G I  A ++ +++      
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM---GM--------------CKKGMVGQAFQF 216
           P V+TY  LI      G +++  KL++EM   GM               KKG + +  + 
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT 394

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           VR +E  GC PD+++YN L+     +GK +E  +LM EM  +GL+ + VT + ++ +LCR
Sbjct: 395 VRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCR 454

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K ++A D+L +A+ +G   D  SY  LI  Y K  +   A+   D M     +P I+ 
Sbjct: 455 ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN+++A  C+ G  +QA++  ++L + G  P+  +YNT+       G   +A    ++M+
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            K  +PD +T N+L+  LC++GM+++A+ L     S       +SYN IIL  CK +R  
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           E+ ++L  M EK   P+  TY  ++ G+   G   +A E 
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEF 674



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 30/461 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI     E +  +A+RV+  +  YG  PD   YN ++ G CK  ++  A  +L  ++++G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+  T+NI++   C  G ++ A  V + + +++  P   TY ++I             
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS------------ 310

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G CK+G + +A +    +E+    PDV++YN L+      G  EEG KL+ EM 
Sbjct: 311 ------GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            RG++PN VTY++++    + GK ++    +R  +E G  PD  +Y+ LIS +CK G++D
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   +D M   G   D V  NT+L A C+    D+A ++       G   +  SY T+ 
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
              +      +AL +  EM  K I P  ITYNS+I+ LC+ G  ++A+  L ++  +   
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV 544

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P  I+YN II G+C+  ++ ++ +    M EK  KP+  T   L+ G+   G   +A++L
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604

Query: 497 ANALVS----MHAISRDTF-------KRLNRTFPLLDVYKE 526
            N  +S    + A+S +T        KR    F LL+  +E
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 216/456 (47%), Gaps = 24/456 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR----VMEILEKYG-EPD 105
           G+  ++      M   G +P ++ C  L+    +   S+ ++R    V     K G + +
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVR-FPSSHSIRLSKAVFTDFIKIGVKIN 196

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
             ++N LI G C  N+   A +VL ++R  G  PD +TYN ++  LC +G +  A  +  
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLL 256

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            +      P   T+ IL+                  +G C+ G + +A   +  +     
Sbjct: 257 DMKNKGLFPNRTTFNILV------------------VGCCRLGWLKEAANVIELMSQNSV 298

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            PD  +YN+++      G+  E  +L  EM +  L P+VVTY+ LI+     G +E+   
Sbjct: 299 VPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFK 358

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           ++   + +G+ P++ +Y+ ++  + K G++D   + +  M   GCLPDIV YNT+++  C
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHC 418

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  D+A  + +++   G   +  + NTM  AL        A  ++     +G   DE+
Sbjct: 419 KVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV 478

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           +Y +LI    +     +A+ L  +M+     P++I+YN +I G C+  + N++I+ L  +
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E G  P+E TY  +I G    G   +A +  N +V
Sbjct: 539 LESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 41/316 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + GK DE+   ++ M   G K D V    +++   +ERK ++A  ++    
Sbjct: 410 YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G   D  +Y  LI G+ K  +   A ++ D ++ +   P ++TYN MI  LC  G   
Sbjct: 470 RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A    D+LL     P  ITY  +I     EGQ +KA +  ++M                
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+GM+ +A +   +  S+G   D +SYN ++ +L    ++ E   L+ EM  + L 
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-----------------------PD 298
           P+  TY+ ++  L   G+ +DA + +    EKG +                       P+
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPN 709

Query: 299 AYSYDPLISAYCKDGR 314
           A +Y   I+  C  GR
Sbjct: 710 AIAYSNKINELCSQGR 725



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 41/275 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R  K DE+   + S    G   D V    LI  +F+  K+++A+R+  E+ EK   P + 
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I+G C+  +   A   LD L   G  PD +TYN +I   C  G +E AF+  +++
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMV 210
           +  N KP V+T   L+     EG  +KA+KL +                  + +CK+   
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG------LE--- 261
           G+AF  +  +E +   PD  +YN +L  L + G+ ++ E+ ++++  +G      LE   
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGK 693

Query: 262 --------------PNVVTYSILISSLCRDGKTED 282
                         PN + YS  I+ LC  G+ +D
Sbjct: 694 RQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 9/200 (4%)

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ---ALEIFEK 359
           D  I AY   GR   A +  + M   G  P ++  NT+L A  +  ++     +  +F  
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187

Query: 360 LSDVGCPPNVSSYNTMFSALWSS---GDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
              +G   N +S+N +          G+ IR LG   +M   G  PD ITYN+++  LC+
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLG---KMRDYGCPPDNITYNTILDGLCK 244

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G ++EA  LL+DM++    P   ++NI+++G C+   + E+  V+  M +    P+  T
Sbjct: 245 KGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWT 304

Query: 477 YVLLIEGIGYGGWRAEAMEL 496
           Y ++I G    G  AEAM L
Sbjct: 305 YNVMISGFCKQGRIAEAMRL 324


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 246/476 (51%), Gaps = 34/476 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+ + +AG+   +L F+ ++      PDV +   LI   F++   ++AV++ E +E
Sbjct: 65  FKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENME 124

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG--FSPDVVTYNIMIGS-LCSRG 155
                PD+F YN +ISG CK+  +E A ++L+ +  RG   +PD+VTYN +I + +C  G
Sbjct: 125 SSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDG 184

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +E A ++ D +      P VITY  +I A                  +C  G V +A +
Sbjct: 185 DVEEALEILDGMKLAGPAPDVITYNSIIHA------------------LCVAGRVVEAAE 226

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            ++++    C PD++++N LL      G      +++ EM    + P+V+TY+IL++ LC
Sbjct: 227 ILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI---------EFLDYMI 326
           R G+ + A  +L     +G  PD  +Y  L+   CK G ++ A          E L  M+
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S   +P +  YN +L    K+G+  +A+ +   L   G  P+V +YNT+   L  +    
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM S G  P+++T  S++  LCR G VD+A  L+V+M   R  P V+ Y  +I
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G CK+ R++++  VL AM  +G   ++  Y  LI  + +GG  AEAM + + +V+
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVA 519



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 217/442 (49%), Gaps = 38/442 (8%)

Query: 86  RKSNKAVRVMEILEKYGEPD-----VFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           R+S++    ++  +  GE D     V +YN L+    K+       KV   L   G SP+
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPN 61

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +VT+ I+I   C  G    A +    L   +  P V  +  LI     +G  D+A+KL +
Sbjct: 62  LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            M                  ES    PD+ +YN ++  L   G  E+  +L+ EMI RG 
Sbjct: 122 NM------------------ESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG 163

Query: 261 E--PNVVTYSILISS-LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +  P++VTY+ LI++ +C+DG  E+A+++L   K  G  PD  +Y+ +I A C  GR+  
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVE 223

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A E L  M    C PD+V +NT+L  FCK G   +ALE+ E++      P+V +Y  + +
Sbjct: 224 AAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 280

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL---------LV 428
            L   G    A  ++ E++ +G  PD I Y SL+  LC+ G ++EA  L         L 
Sbjct: 281 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILA 340

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M S    P + +YNI++ G  K   I++++ +++ +  +G  P+  TY  LI+G+    
Sbjct: 341 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400

Query: 489 WRAEAMELANALVSMHAISRDT 510
              EA +LA+ + S+     D 
Sbjct: 401 RVREACDLADEMASLGCFPNDV 422



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 207/462 (44%), Gaps = 71/462 (15%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           ++ E +R        P+ ++ +F         LI   F+ G  D+++   E+M ++   P
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNF---------LIHGLFKDGNPDQAVKLFENMESSRVNP 130

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALI-SGFCKANQIELAN 126
           D+     +I    +     KA  ++E + + G    PD+  YN LI +G CK   +E A 
Sbjct: 131 DIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEAL 190

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLC--------------------------------SR 154
           ++LD ++  G +PDV+TYN +I +LC                                  
Sbjct: 191 EILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKA 250

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           GM+  A +V +++ R+N  P VITYTIL+      GQ   A  LL+E+            
Sbjct: 251 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 310

Query: 203 -----GMCKKGMVGQAFQFVRSLESR---------GCQPDVISYNMLLRTLLNMGKWEEG 248
                G+CK G + +A + V+ + +R            P + +YN++L  L+  G   + 
Sbjct: 311 TSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 370

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L++++++RG  P+VVTY+ LI  LC+  +  +A D+       G  P+  +   ++  
Sbjct: 371 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFG 430

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C+ GR+D A   +  M      P++V Y +++   CK+   D A  + + +   G   +
Sbjct: 431 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALD 490

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             +Y  +  ++   G    A+ M  EM+++G  PD  T  +L
Sbjct: 491 DFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 243/471 (51%), Gaps = 26/471 (5%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +RP   L+ F    ++F   I R+    +F+  L F + +  NG   ++     +I  F 
Sbjct: 82  SRPLPGLVDF----SRFFSAIART---KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +  K+  A  V+  + K G EPD   +N LI+G C   ++  A  ++DR+   G  PD+V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV 194

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN ++  +C  G    AF +  ++   N K  V TY+ +I +                 
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS----------------- 237

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +C+ G +  A    + +E++G +  V++YN L+R L   GKW +G  L+ +M+SR + P
Sbjct: 238 -LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+T+++L+    ++GK ++A ++ +    +G++P+  +Y+ L+  YC   RL  A   L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+ + C PDIV + +++  +C     D  +++F  +S  G   N  +Y+ +      S
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +  EM+S G+ PD +TY  L+  LC +G +++A+ +  D++ ++    ++ Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             II G CK  ++ ++  +  ++  KG KPN  TY ++I G+   G  +EA
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 52/453 (11%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L ++   T F  LI      GK  +++  ++ MV NGC+PD+V                 
Sbjct: 152 LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV----------------- 194

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
                             YN++++G C++    LA  +L ++  R    DV TY+ +I S
Sbjct: 195 -----------------TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC  G I++A  +F ++     K +V+TY  L++                  G+CK G  
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR------------------GLCKAGKW 279

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                 ++ + SR   P+VI++N+LL   +  GK +E  +L  EMI+RG+ PN++TY+ L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C   +  +A ++L        +PD  ++  LI  YC   R+D  ++    +   G 
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           + + V Y+ ++  FC++G    A E+F+++   G  P+V +Y  +   L  +G   +AL 
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  ++    ++   + Y ++I  +C+ G V++A  L   +     +P V++Y ++I G C
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K   ++E+  +L  M E G  PN+ TY  LI  
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 213/434 (49%), Gaps = 18/434 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PD      LI     E K +KAV +++ ++E   +PD+  YN++++G C++    LA
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L ++  R    DV TY+ +I SLC  G I++A  +F ++     K +V+TY  L++ 
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 186 TMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPD 228
               G+ +    LL +M                    K+G + +A +  + + +RG  P+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +I+YN L+       +  E   ++  M+     P++VT++ LI   C   + +D + V R
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              ++GL  +A +Y  L+  +C+ G++ LA E    M+S G LPD++ Y  +L   C NG
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++ALEIFE L        +  Y T+   +   G    A  +   +  KG++P+ +TY 
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +IS LC+ G + EA  LL  ME     P   +YN +I    +   +  S +++  M   
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572

Query: 469 GCKPNETTYVLLIE 482
           G   + ++  ++I+
Sbjct: 573 GFSADASSIKMVID 586



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 192/411 (46%), Gaps = 18/411 (4%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +K +      E++     P +  ++   S   +  Q  L      +L   G + ++ T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           IMI   C       A+ V  ++++   +P   T+  LI    LEG+  KA+ L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM--- 184

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                             GCQPD+++YN ++  +   G       ++ +M  R ++ +V 
Sbjct: 185 ---------------VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVF 229

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS +I SLCRDG  + A+ + +  + KG+     +Y+ L+   CK G+ +     L  M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S   +P+++ +N +L  F K G   +A E+++++   G  PN+ +YNT+          
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  M+  M+     PD +T+ SLI   C    VD+ + +  ++         ++Y+I+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + GFC++ +I  + E+   M   G  P+  TY +L++G+   G   +A+E+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 19/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-AVRVMEILEKYGEPDVF 107
           R G  D ++   + M   G K  VV    L++   +  K N  A+ + +++ +   P+V 
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+  F K  +++ AN++   + +RG SP+++TYN ++   C +  +  A  + D +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R+ C P ++T+T LI+   +  + D  MK+                   R++  RG   
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF------------------RNISKRGLVA 401

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++Y++L++     GK +  E+L  EM+S G+ P+V+TY IL+  LC +GK E A+++ 
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++  +      Y  +I   CK G+++ A      +   G  P+++ Y  +++  CK 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+  +A  +  K+ + G  PN  +YNT+  A    GD   +  +I EM S G   D  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 408 NSLISCL 414
             +I  L
Sbjct: 582 KMVIDML 588


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 240/444 (54%), Gaps = 19/444 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F      F  LI      G+  E++  ++ +++ G +P V   T ++    +  K++ 
Sbjct: 168 LGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSA 227

Query: 91  AVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+  M+ ++E   EP+V +Y+ +I   CK   +  A  +   +RS G SP VVTYN +I 
Sbjct: 228 AIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            +C+ G  + A  +F ++L  N KP V+T++IL+ A                  +CK+G+
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA------------------LCKEGV 329

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A      +     +PD+++Y+ L+  +     W+E   L+ EM+SR + P+VVT+SI
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            +   C+ G   +A  ++    E+GL P+  +Y+ L+  YC   ++D A +  D M++ G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PD+++YN ++  +CK+   D+A ++F+++S  G  PN  ++ T+ S L  +G    A 
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  +M S G  PD ITY++L+S  C+ G +DEA+ L   ++ ++ +P  +   I++ G 
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569

Query: 450 CKTRRINESIEVLAAMFEKGCKPN 473
           CK  ++ ++ E+ +++  +  +P+
Sbjct: 570 CKAGKLEDAKELFSSLSIEELQPD 593



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 223/468 (47%), Gaps = 22/468 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
           FD++L +   MV     P +    +L+    + +  +  V +   +E +G    V+    
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI+  C  + + L   VL ++   GF P ++T+N +I  LC  G I  A +  D ++   
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
            +PTV T+T+++      G+T  A+  + +M                  +CK  +V +A 
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                + S G  P V++YN L+  + N G+W++   L  EM+   ++P+VVT+SIL+ +L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++G   +A+ V     +  + PD  +Y  LI   CK      +   L+ M+S    PD+
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA--LWSSGDKIRALGMI 392
           V ++  +  FCK G   +A  I   + + G  PNV +YN++     L S  D+ R +  I
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             M++KG  PD ++YN LI   C+   +DEA  L  +M      P  I++  +I G C+ 
Sbjct: 445 --MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            R   + E+   M   GC P+  TY  L+ G    G   EA+ L  AL
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 231/481 (48%), Gaps = 18/481 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           TQF +L+    R   +D  +     M   G    V   T LI              V+  
Sbjct: 105 TQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGK 164

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +P +  +N LI+G C   +I  A + LD + SRG+ P V T+ +++  LC  G 
Sbjct: 165 IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
             +A     +++  +C+P V++Y+I+I +       ++A+ L   M              
Sbjct: 225 TSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              GMC  G   QA    + +     +PDV+++++L+  L   G   E   +  +MI   
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP++VTYS LI  +C+    +++  +L     + + PD  ++   +  +CK G +  A 
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             ++ MI  G  P++V YN+++  +C +   D+A ++F+ + + GC P+V SYN +    
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGY 464

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             S     A  +  EM  KG+ P+ IT+ +LIS LC+ G    A  L   M S    P +
Sbjct: 465 CKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDL 524

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I+Y+ ++ GFCK   ++E++ +  A+ +   KPN     +L+ G+   G   +A EL ++
Sbjct: 525 ITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSS 584

Query: 500 L 500
           L
Sbjct: 585 L 585



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 186/362 (51%), Gaps = 17/362 (4%)

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------------- 203
           + A   F+Q++  N  P +  +  L+ A +     D  + +  +M               
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 204 ---MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +C   +VG  F  +  +   G +P +I++N L+  L   G+  E  + +  ++SRG 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P V T++++++ LC+ GKT  A+  ++   E    P+  SY  +I + CK+  ++ A++
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
              +M S G  P +V YN+++   C +G   QA  +F+++ +    P+V +++ +  AL 
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G  + AL +  +M+   +EPD +TY+SLI  +C+  +  E+  LL +M S   RP V+
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +++I +  FCK   ++E+  ++  M E+G +PN  TY  L++G        EA ++ + +
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 501 VS 502
           V+
Sbjct: 446 VN 447



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 121/250 (48%)

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M+     P +  ++ L+++L R    +  V + R  +  G++   Y+   LI+  C   
Sbjct: 94  QMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLH 153

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            + L    L  +   G  P I+ +NT++   C  G   +A+E  + +   G  P V ++ 
Sbjct: 154 LVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHT 213

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            + + L   G    A+  + +M+    EP+ ++Y+ +I  LC++ +V+EAV L   M S 
Sbjct: 214 MIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI 273

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              PTV++YN +I G C + +  ++  +   M E   KP+  T+ +L++ +   G   EA
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEA 333

Query: 494 MELANALVSM 503
           + +   ++ +
Sbjct: 334 LSVFGKMIQI 343


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 241/483 (49%), Gaps = 21/483 (4%)

Query: 15  RVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
           ++++  SA T  ++  +  DV    F  +I    RA +   ++  +E M +    PD   
Sbjct: 176 KIKLLESAYTEMSSQGIEPDV--VTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETT 233

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
            T L++ F +E     A+R+   + + G  P     N LI+G+CK  ++  A   + +  
Sbjct: 234 FTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEI 293

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           + GF PD VT++  +  LC  G ++ A KV   +L++ C+P V TY+ +I          
Sbjct: 294 ADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINC-------- 345

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +C  G + +A   V  +   GC PD  ++N L+  L    + EE   L  
Sbjct: 346 ----------LCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           E+  +GL PNV T++ILI++LC+ G    AV +    K  G TPD  +Y+ LI   C  G
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +L  A++ L  M   GC    V YNTI+   CK    ++A E+F+++   G   N  ++N
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+   L ++     A  ++ +M+S+G++P+ +TYNS+++  C+ G + +A  +L  M + 
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            F   V++Y  +I G CK RR   ++++L  M  KG KP    Y  +I+ +  G    +A
Sbjct: 576 GFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDA 635

Query: 494 MEL 496
           + L
Sbjct: 636 LSL 638



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 246/489 (50%), Gaps = 24/489 (4%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R+ +SA  R +    S DV E    ++I++   AG FD     +  M   G +  + + 
Sbjct: 73  LRMLNSALARDDGLTPSRDVYE----EIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLV 128

Query: 76  TKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
              I  + + +  + A   V   L+ +G + +   YN L++   + ++I+L       + 
Sbjct: 129 QSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMS 188

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           S+G  PDVVT+N +I +LC      +A  + +++   +  P   T+T L++  + EG  +
Sbjct: 189 SQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIE 248

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
            A++L   M                     GC P  ++ N+L+     +G+  +    + 
Sbjct: 249 AALRLKARM------------------SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQ 290

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           + I+ G EP+ VT+S  ++ LC++G  + A+ VL    ++G  PD Y+Y  +I+  C +G
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNG 350

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            L+ A   ++ M+  GCLPD   +NT++ A C     ++AL++  +L+  G  PNV ++N
Sbjct: 351 ELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFN 410

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            + +AL   GD   A+ +  EM S G  PDE+TYN LI  LC  G + +A+ LL +ME +
Sbjct: 411 ILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
               + ++YN II G CK RRI E+ EV   M   G   N  T+  LI+G+       +A
Sbjct: 471 GCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDA 530

Query: 494 MELANALVS 502
            EL + ++S
Sbjct: 531 AELVDQMIS 539



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 27/458 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+     F   +    + G  D +L  +  M+  GC+PDV   + +I       +  +A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             ++  +   G  PD   +N LI   C  NQ+E A  +   L  +G SP+V T+NI+I +
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G    A ++F+++    C P  +TY ILI      G+  KA+ LL EM        
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+  + +A +    ++  G   + I++N L+  L N  + ++  +L+ 
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +MIS GL+PN VTY+ +++  C+ G    A D+L+     G   D  +Y  LI+  CK  
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R   A++ L  M   G  P    YN ++ +  +  N   AL +F ++++VG PP+  +Y 
Sbjct: 596 RTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYK 655

Query: 374 TMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD---EAVGLLVD 429
            +F  L   G  I+ A   + EM   G  P+  ++  L   L   GM D    A+ L+V 
Sbjct: 656 IVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIV- 714

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            E   FR + IS    I G+ + R+  ++I     + E
Sbjct: 715 -EKANFRESDIS---AIRGYLRIRKYYDAIATFGRLLE 748



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 40/238 (16%)

Query: 270 LISSLCRDGKTEDAVDVLRAA--KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           L+++L      E A+ +L +A  ++ GLTP    Y+ +I      G  DL    +  M  
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKI 386
           +G    +    + + ++ +    D A ++     D+ G   N   YN + + L + G KI
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVL-AEGSKI 177

Query: 387 RAL-GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + L    +EM S+GIE                                   P V+++N +
Sbjct: 178 KLLESAYTEMSSQGIE-----------------------------------PDVVTFNTV 202

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I   C+ R+   ++ +L  M      P+ETT+  L+EG    G    A+ L   +  M
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM 260


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 228/430 (53%), Gaps = 22/430 (5%)

Query: 75  CTKLIKKFFQERKSNKAVRVM--EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
           C  L++   + R+ ++A ++   E+L ++ + +   YN LI GFCKA  +E A ++L  +
Sbjct: 72  CNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           + RG SPDVVT++ ++ +LC+ G +  A + F + +   C P  + + IL+         
Sbjct: 132 KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVH-------- 181

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G+CK   + +A Q +  +  RG  PDV++YN L+  L    + EE  +L+
Sbjct: 182 ----------GLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M+ R + PN+VTY+ LI   C+ G T  A  ++    + G  PD  +++ LIS +C+ 
Sbjct: 232 ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            ++D A E L  M    C P++V YN +++  C  G A++A E+  ++   G  P++ +Y
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N++      +    +A  + + M+ +G+ PD I+Y +L   L +    DEA  LL +M  
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFD 411

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P + ++N ++ G C +RR++E+  +LA M   GC P  +TY +L+ G+   G   +
Sbjct: 412 AGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471

Query: 493 AMELANALVS 502
           A E+   +VS
Sbjct: 472 AKEVLVMMVS 481



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 223/447 (49%), Gaps = 30/447 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI    +AG  + +   +  M   G  PDVV  + +++       +    R
Sbjct: 102 DTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALC---NTGNLSR 158

Query: 94  VMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            M+   +  E  PD   +N L+ G CKANQ+  A ++++ +  RG  PDVVTYN +I  L
Sbjct: 159 AMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    +E A ++ + +++   +P ++TY  LI                   G CK G  G
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLI------------------YGYCKTGCTG 260

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSIL 270
            A Q +  +   G  PDV+++N L+       K ++  +++  ++ +GL  PN+VTY++L
Sbjct: 261 LAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVL 319

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS LC  G+  +A ++L     +G+ PD  +Y+ LI  +C++ +++ A +  + M+  G 
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD ++Y T+  A  K+   D+A  + + + D G  PN+ ++N++   L  S     A  
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++ M   G +P   TY  L++ LC+ G VD+A  +LV M S   +P V S   I+    
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 451 KTRRINESI----EVLAAMFEKGCKPN 473
           +  + + ++    +V+AA   K C P+
Sbjct: 500 REGKQDLALHYFDQVVAAE-SKACDPS 525



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 19/373 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    +A +  E+   IE M   G  PDVV    LI    +  +  +A +++E + 
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV 235

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K    P++  YN LI G+CK     LA+++++R+   G  PDVVT+N +I   C +  I+
Sbjct: 236 KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +V   + +  C P ++TY +LI                   G+C  G   +A + + 
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLIS------------------GLCDAGRANEACELLS 337

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++ RG  PD+I+YN L+       + E+  ++   M+ RG+ P+ ++Y  L  +L +  
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +L    + G  P+ ++++ L+   C   RLD A   L  M   GC P    Y 
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYE 457

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   CK G  D A E+   +   G  P VSS  T+   L   G +  AL    ++++ 
Sbjct: 458 VLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAA 517

Query: 399 GIEPDEITYNSLI 411
             +  + +Y  L+
Sbjct: 518 ESKACDPSYQKLL 530


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 241/449 (53%), Gaps = 21/449 (4%)

Query: 39  QFMKLIKRSFRAGKFDE--SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +F KL+    +  KFD   SL  +  M+  G +P +V  + L+  +   ++ + AV +++
Sbjct: 44  EFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 103

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + + G  PD   +  LI G    N+   A  ++DR+  RG  P++VTY +++  LC RG
Sbjct: 104 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ AF + +++     +  V+ +  +I +                  +CK   V  A  
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDS------------------LCKYRHVDDALN 205

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             + +E++G +P+V++Y+ L+  L + G+W +  +L+++MI + + PN+VT++ LI +  
Sbjct: 206 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++GK  +A  +     ++ + PD ++Y+ LI+ +C   RLD A +  ++M+S  C PD+ 
Sbjct: 266 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 325

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++  FCK+   +   E+F ++S  G   +  +Y T+   L+  GD   A  +  +M
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G+ PD +TY+ L+  LC +G +++A+ +   M+ +  +  +  Y  +I G CK  ++
Sbjct: 386 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 445

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++  ++  ++  KG KPN  TY  +I G+
Sbjct: 446 DDGWDLFCSLSLKGVKPNVVTYNTMISGL 474



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 199/414 (48%), Gaps = 18/414 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+P++V    ++    +    + A  ++  +E
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               E DV  +N +I   CK   ++ A  +   + ++G  P+VVTY+ +I  LCS G   
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   ++     P ++T+  LI A + EG+  +A KL D+M                
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A Q    + S+ C PD+ +YN L++      + E+G +L  EM  RGL 
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VTY+ LI  L  DG  ++A  V +     G+ PD  +Y  L+   C +G+L+ A+E 
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 416

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            DYM       DI  Y T++   CK G  D   ++F  LS  G  PNV +YNTM S L S
Sbjct: 417 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 A  ++ +M   G  PD  TYN+LI    RDG    +  L+ +M S RF
Sbjct: 477 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 530



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 150/300 (50%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C    +  A   V  +   G +PD I++  L+  L    K  E   L+  M+ RG +P
Sbjct: 88  GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 147

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N+VTY ++++ LC+ G  + A ++L   +   +  D   ++ +I + CK   +D A+   
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M + G  P++V Y+++++  C  G    A ++   + +    PN+ ++N +  A    
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G  + A  +  +M+ + I+PD  TYNSLI+  C    +D+A  +   M S    P + +Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N +I GFCK++R+ +  E+   M  +G   +  TY  LI+G+ + G    A ++   +VS
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 166/345 (48%), Gaps = 31/345 (8%)

Query: 2   STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           S+++SC+      S+    +S   E + N +L++F+        LI    + GKF E+  
Sbjct: 223 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 275

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFC 117
             + M+     PD+     LI  F    + +KA ++ E +  K   PD+  YN LI GFC
Sbjct: 276 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 335

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K+ ++E   ++   +  RG   D VTY  +I  L   G  ++A KVF Q++ D   P ++
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY+IL+      G+ +KA+++ D M                 GMCK G V   +    SL
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G +P+V++YN ++  L +    +E   L+ +M   G  P+  TY+ LI +  RDG  
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
             + +++R  +      DA S   L++    DGRLD +  FLD +
Sbjct: 516 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 557



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 137/270 (50%), Gaps = 3/270 (1%)

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK--EKGLTPDAYS 301
           K ++   L   M+     P++  ++ L+S++ +  K +  + +    K  + G  P   +
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
              L++ YC   R+  A+  +D M+  G  PD + + T++     +  A +A+ + +++ 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             GC PN+ +Y  + + L   GD   A  ++++M +  IE D + +N++I  LC+   VD
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +A+ L  +ME+   RP V++Y+ +I   C   R +++ ++L+ M EK   PN  T+  LI
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 482 EGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +     G   EA +L + ++   +I  D F
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIK-RSIDPDIF 290



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 39/232 (16%)

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA------------------------ 343
           ++ KD +LD AI     M+    LP I  +N +L+A                        
Sbjct: 16  SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75

Query: 344 -------------FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
                        +C       A+ + +++ ++G  P+  ++ T+   L+       A+ 
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++  M+ +G +P+ +TY  +++ LC+ G +D A  LL  ME+ +    V+ +N II   C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALV 501
           K R +++++ +   M  KG +PN  TY  LI  +  YG W ++A +L + ++
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMI 246


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 227/420 (54%), Gaps = 22/420 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G K  ++ C  L+    +E ++     V  E++++  E +V ++N +++G CK  ++  A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK---VFDQLLRDNCKPTVITYTIL 182
             V++ ++  G SP+V+TYN +I   C  G I   +K   +  +++     P  +TY IL
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I                   G CK   V  A +    ++ +G +P+V++YN+L+  L + 
Sbjct: 235 ID------------------GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           GK +E   L  +M+S  LEPNVVT+++LI+  C++    +A+++    +++G+ P+A +Y
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             LI AYCKDGR++ A    + MI  G  P++  YN ++A  C+ G+   A  +  ++  
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                +V +YN +  +L   G+  +A+ ++ EM  KG+ P  +TYN+L+   CR+G +  
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ +   ME    +  V+++N++I GFC   R+ ++  +L  M E+G  PN TTY ++ E
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 28/414 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS-----GFCKANQIELANKVLDRL 132
            + KF +  K      +   +   G  D F  N++++      F +  +I    +   R 
Sbjct: 54  FLDKFVKYEKDYSVSAIFHAISMSG--DSFCVNSILADMLVLAFVRNLKILRGFEAFKRA 111

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
              GF   +++ N ++  L           V+ ++++   +  VI++ I++         
Sbjct: 112 GDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVN-------- 163

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG---KWEEGE 249
                     G+CK G + +A   +  ++  G  P+VI+YN L+     MG   K  + +
Sbjct: 164 ----------GLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            ++ EM+++G+ PN VTY+ILI   C+D     A+ V    + +GL P+  +Y+ LI+  
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C DG++D A+   D M+S    P++V +N ++  FCKN   ++A+ +F  +   G  PN 
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y T+  A    G    A  + + M+ +GI P+  TYN LI+ LCR G V  A  L+ +
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           M S +    V++YNI+I   CK     +++++L  MFEKG  P+  TY  L++G
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 211/419 (50%), Gaps = 25/419 (5%)

Query: 90  KAVRVMEILEKYGEP----DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K +R  E  ++ G+      + + N L+SG  K ++      V   +  R    +V+++N
Sbjct: 100 KILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFN 159

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           I++  LC  G +  A  V + +      P VITY  LI                   G C
Sbjct: 160 IVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLID------------------GYC 201

Query: 206 KKGMVGQAFQ---FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           K G +G+ ++    ++ + ++G  P+ ++YN+L+             ++  EM  +GL P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NVVTY+ILI+ LC DGK ++AV +        L P+  +++ LI+ +CK+  ++ AI   
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   G  P+ + Y T++ A+CK+G  + A  ++  + D G  P VS+YN + + L   
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD   A  +++EM+SK +  D +TYN LI  LC+ G   +AV LL +M      P+ ++Y
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           N ++ G+C+   +  ++ V   M  KG + N  T+ +LI+G    G   +A  L N ++
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 21/360 (5%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIEL---ANKVLDRLRSRGFSPDVV 142
           K N+A  V+E ++ +G  P+V  YN LI G+CK  +I     A+ +L  + ++G  P+ V
Sbjct: 170 KLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEV 229

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYNI+I   C    +  A +VF ++ R   +P V+TY ILI     +G+ D+A+ L D+M
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G CK   V +A      +E +G  P+ ++Y  L+      G+ 
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRM 349

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E+   L   MI RG+ P V TY+ LI+ LCR G  + A  ++     K L+ D  +Y+ L
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I + CK G    A++ LD M   G  P  V YNT++  +C+ GN   AL +  ++   G 
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             NV ++N +       G    A G+++EML +G+ P+  TY  +   +   G V +  G
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 244/467 (52%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG    +L  +  M   G +PD+ +C   I    +  K  KA+R +E ++  G EPD+ 
Sbjct: 244 RAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIV 303

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI G+C  ++I+ A +++  +  +G  PD V+Y  ++  LC    +E   ++ + +
Sbjct: 304 SYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENM 363

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG-------MCKKGM 209
           +++ N  P  +TY  LI A    G  D A+  L          D++G        CK   
Sbjct: 364 VQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKN 423

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   V  + S+GC PDV++Y  ++     +GK +E +K++ +M   G +PN VTY++
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC +GK+ +A +++  ++E   TP+A +Y  ++    ++G+L  A +    MI  G
Sbjct: 484 LLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            LP+ V+ N ++ + C+N N   A +  E+    GC  NV ++ ++       GD   AL
Sbjct: 544 FLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAAL 603

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            M+ +M      PD ITY +L   L +   +DEA  L+V M      PT ++Y  +I  F
Sbjct: 604 SMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRF 663

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+++ +++L  M  +  +P +T Y  +IE + Y G R EA +L
Sbjct: 664 CQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKL 708



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 212/457 (46%), Gaps = 22/457 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + D++L  I  M   GC PD V    ++    ++RK  +  R+ME + +  
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              PD   YN LI    K    + A   L     +GF  D V Y+ ++ S C    I+ A
Sbjct: 368 NLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA 427

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             +   +    C P V+TYT +I      G+ D+A K+L +M                  
Sbjct: 428 KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM------------------ 469

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC+P+ ++Y +LL  L + GK  E  +++         PN +TYS ++  L R+GK 
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A D+ R   EKG  P+    + LI + C++  +  A ++L+  +  GC  ++VN+ ++
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  FC+ G+ D AL + E +      P+  +Y T+F AL        A  +I +ML KGI
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P  +TY ++I   C+ G VD+ + LL  M +   +P    YN +I   C      E+ +
Sbjct: 650 DPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEK 707

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           +L  +     K +  T  +LIE     G    A ++A
Sbjct: 708 LLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVA 744



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 201/420 (47%), Gaps = 24/420 (5%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIELA 125
           + D ++   ++    + R    A R++ ++ + G    P+ F+Y  ++  + +A  +  A
Sbjct: 194 RHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNA 251

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L  ++  G  PD+   N  I  L     +E A +  +++     +P +++Y  LI+ 
Sbjct: 252 LRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIK- 310

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G C    +  A + +  +  +GC PD +SY  ++  L    K 
Sbjct: 311 -----------------GYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353

Query: 246 EEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           EE ++LM  M+ +  L P+ VTY+ LI +L + G  +DA+  LR A+EKG   D   Y  
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           ++ ++CK+  +D A   +  M S GC PD+V Y  I+  FC+ G  D+A ++ +++   G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C PN  +Y  + + L  +G  + A  MI+        P+ ITY++++  L R+G + EA 
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEAC 533

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L  +M    F P  +  N++I   C+ + +  + + L     KGC  N   +  +I G 
Sbjct: 534 DLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGF 593



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 157/298 (52%), Gaps = 5/298 (1%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQ--PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + K  +   A + +R +  RG +  P+  SY M+  +    G      +++T M   G+E
Sbjct: 207 LSKTRLCQGARRILRLMTRRGIERSPEAFSYVMV--SYSRAGMLRNALRILTLMQKAGVE 264

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P++   +  I  L +  K E A+  L   K  G+ PD  SY+ LI  YC   R+D A+E 
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALEL 324

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALW 380
           +  M   GC PD V+Y T++A  CK+   ++   + E +  +    P+  +YNT+  AL 
Sbjct: 325 IAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALS 384

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    AL  + E   KG   D++ Y++++   C++  +D+A  L++DM S    P V+
Sbjct: 385 KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV 444

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +Y  II GFC+  +I+E+ ++L  M++ GCKPN  TY +L+ G+ + G   EA E+ N
Sbjct: 445 TYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/397 (19%), Positives = 181/397 (45%), Gaps = 21/397 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  ++    +    D++   +  M + GC PDVV  T +I  F +  K ++A 
Sbjct: 404 FHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAK 463

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++++ + K+G +P+   Y  L++G C   +   A ++++      ++P+ +TY+ ++  L
Sbjct: 464 KMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGL 523

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G +  A  +  +++     P  +   +LIQ+                  +C+   V 
Sbjct: 524 RREGKLSEACDLTREMIEKGFLPNPVDINLLIQS------------------LCRNQNVV 565

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A +++     +GC  +V+++  ++     +G  +    ++ +M      P+ +TY+ L 
Sbjct: 566 GAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLF 625

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L +  + ++A +++     KG+ P   +Y  +I  +C+ GR+D  ++ L+ MI+    
Sbjct: 626 DALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ-- 683

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P    YN ++   C  GN ++A ++  K+       +  + + +  +    G+ + A  +
Sbjct: 684 PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKV 743

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +M  + + PD      +   L  DGM  EA  L++
Sbjct: 744 ACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLML 780


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 227/459 (49%), Gaps = 20/459 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           QF KL+    + G++  ++  + + M   G  PD+   + LI  F   ++ + A  V   
Sbjct: 96  QFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSK 155

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +PD   +N LI+G CK  +   A +  D   + G  P V TY  +I  LC  G 
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
             +A  +F ++    C+P V+TY ILI +                  +CK  +V +A   
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDS------------------LCKDKLVNEALDI 257

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              ++++   PD+ +YN L++ L N  +W+E   L+ EM S  + PN+ T+++L+ ++C+
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK 317

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +GK  +A  V +   E G+ PD  +Y  L+  Y     +  A +  D MI+ GC PD  +
Sbjct: 318 EGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFS 377

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +CK    D+A ++F ++   G  P+  +YNT+   L   G    A  +   M 
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G  PD  TY+ L+   C++G + +A  L   M+ST  +P +  YNI+I   CK   + 
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           ++ ++ + +F +G  PN   Y  +I  +   G   EA+E
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 217/436 (49%), Gaps = 18/436 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + D +      M+  G +PD V    LI    +  K  +AV   +  E  G +P V+ Y 
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+G CK  +   A  +  ++   G  P+VVTYNI+I SLC   ++  A  +F  +   
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P + TY  LIQ      +  +A  LL+EM                  +CK+G V +A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               +++   G +PDV++Y+ L+       +  E  KL   MI++G +P+  +Y+ILI  
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+  + ++A  +      +GLTPD  +Y+ LI   C+ GRL  A +    M S+G LPD
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD 444

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y+ +L  FCK G   +A  +F  +      P+++ YN +  A+   G+   A  + S
Sbjct: 445 LFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFS 504

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E+  +G+ P+   Y ++I+ LC++G++DEA+    +ME     P   SYN+II GF + +
Sbjct: 505 ELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYK 564

Query: 454 RINESIEVLAAMFEKG 469
             + + +++  M ++G
Sbjct: 565 DESRAAQLIGEMRDRG 580



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 201/410 (49%), Gaps = 19/410 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSR 154
            +L +   P +  +  L+S   K  Q   A   L + +   G SPD+ T +I+I      
Sbjct: 84  HMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHL 143

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++ AF VF ++++   +P  +T+  LI                   G+CK G   QA 
Sbjct: 144 QRVDLAFSVFSKMIKLGLQPDAVTFNTLIN------------------GLCKVGKFAQAV 185

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +F    E+ GCQP V +Y  ++  L  +G+      L  +M   G +PNVVTY+ILI SL
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+D    +A+D+    K K ++PD ++Y+ LI   C   R   A   L+ M S   +P+I
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNI 305

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +N ++ A CK G   +A  +F+ ++++G  P+V +Y+++        + + A  +   
Sbjct: 306 FTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDA 365

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M++KG +PD  +YN LI   C+   +DEA  L  +M      P  ++YN +I G C+  R
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR 425

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           + E+ ++   M   G  P+  TY +L++G    G+  +A  L   + S +
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 33/417 (7%)

Query: 28  THLLSFDVKETQFMKLIKRSF---------------RAGKFDESLYFIESMVANGCKPDV 72
           +HL   D+  + F K+IK                  + GKF +++ F +   A+GC+P V
Sbjct: 141 SHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTV 200

Query: 73  VMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDR 131
              T +I    +  ++  A  + + +E+ G +P+V  YN LI   CK   +  A  +   
Sbjct: 201 YTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY 260

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           ++++  SPD+ TYN +I  LC+    + A  + +++   N  P + T+ +L+ A   EG+
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320

Query: 192 TDKA---MKLLDEMGMCKKGMVGQAFQFVRSLE--------------SRGCQPDVISYNM 234
             +A    K + EMG+    +   +  +  SL               ++GC+PD  SYN+
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L++      + +E ++L  EMI +GL P+ V Y+ LI  LC+ G+  +A D+ +     G
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             PD ++Y  L+  +CK+G L  A      M S    PDI  YN ++ A CK GN   A 
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           ++F +L   G  PNV  Y T+ + L   G    AL     M   G  PDE +YN +I
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 54/296 (18%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK  E+    ++M   G +PDVV  + L+  +    +  +A ++ + + 
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +PD F+YN LI G+CKA +I+ A ++ + +  +G +PD V YN +I  LC  G + 
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F  +  +   P + TY++L+                   G CK+G +G+AF+  R
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLD------------------GFCKEGYLGKAFRLFR 469

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV-------------- 264
            ++S   +PD+  YN+L+  +   G  ++  KL +E+  +GL PNV              
Sbjct: 470 VMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529

Query: 265 ---------------------VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
                                 +Y+++I    +      A  ++   +++G   +A
Sbjct: 530 LLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEA 585



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 10/134 (7%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           K+    RV  S   +P+  + +          LI    + G   ++      +   G  P
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNI---------LIDAMCKFGNLKDARKLFSELFVQGLLP 513

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           +V + T +I    +E   ++A+     +E  G  PD F+YN +I GF +      A +++
Sbjct: 514 NVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLI 573

Query: 130 DRLRSRGFSPDVVT 143
             +R RGF  +  T
Sbjct: 574 GEMRDRGFVAEAGT 587


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 254/483 (52%), Gaps = 36/483 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  L+K      +  E+    E M   GC+P+V+  + L+    +  + ++A R+ E ++
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG--- 155
           EK   PD+ AY + ++G CKAN++  A     ++ ++G   D V ++ +IG LC +G   
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 156 --------------MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
                         M++ A K F++++  N  P+   +  LI A        K+ +L D 
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC------KSKRLPDG 320

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + +         FQ ++S++   C P++ +YN+++  L    + +E ++L+ EM + GL 
Sbjct: 321 VLL---------FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTYS L+  LC+ GK + A D+L    ++G+ PD+++   +++A  K G++D A+  
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M + G  PD+V YNT+L   CK G  D+A+    K+    C P+V SY  + +AL  
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG    A  +  EM+ +G+ PD + Y+SL+  L R+G+ D A+ LL   +++  +P  + 
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVM 548

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + +++ G CK  +  ++ EV+  M + G   +  TY+ ++ G+   G   +A +L +   
Sbjct: 549 HKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDAS 608

Query: 502 SMH 504
             H
Sbjct: 609 ETH 611



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 225/520 (43%), Gaps = 121/520 (23%)

Query: 87  KSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           K +  VR+ + L  +K  +  VF YN  +    KAN  +LA +   +++ RG+ PD  TY
Sbjct: 17  KISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTY 76

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           +I++  LC  G ++ A ++  QL     K  VITY+++I                   G 
Sbjct: 77  SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID------------------GC 118

Query: 205 CKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           CK   V  A +  +++ + G C PDV+++N LL+ L +  +  E   L   M   G EPN
Sbjct: 119 CKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPN 178

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V++YS L+  LC+ G+ ++A  +     EK   PD  +Y   ++  CK  R+  A +   
Sbjct: 179 VISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCR 238

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNA-----------------DQALEIFEK------- 359
            M++ G   D V ++T++   CK G+A                 D+A + FE+       
Sbjct: 239 KMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP 298

Query: 360 -------------------------------LSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
                                          + +  CPPN+ +YN M   L  +     A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM------------------ 430
             +++EM + G+ PD +TY++L+  LC+ G +D A  LL +M                  
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 431 --------------ESTRFR---PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
                         E+ + R   P +++YN ++ G CK  RI+E+I  LA M    C P+
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
             +Y ++I  +   G  A A          HAI ++  KR
Sbjct: 479 VFSYTIIITALCRSGQAAGA----------HAIFQEMVKR 508



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 313 GRLDLAIEFLDYM-ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           G++   +   D++    G    +  YN  L A  K      A E F+++   G PP+  +
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y+ +   L  +G+  +A  ++ ++   G++ + ITY+ +I   C+   VD+A+ +   M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 432 STR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           +     P V+++N ++ G C   R++E+  +   M + GC+PN  +Y  L++G+   G  
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 491 AEAMELANALV 501
            EA  L   +V
Sbjct: 196 DEACRLWEEMV 206


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 229/464 (49%), Gaps = 18/464 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKY 101
           LIK   RA +   ++  +E M ++   PD    T L++ F +E     A+RV  +++E  
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P     N LI+G+CK  ++E A   + +  + GF PD VTYN  +  LC  G +  A 
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           KV D +L++   P V TY  +I      G+ D+A  ++++M                  +
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C +  + +A    R L  +G  PDV ++N+L+  L  +G    G +L  EM S G  P+ 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ILI  LC  GK  +A+D+L+  +  G      +Y+ +I A CK  R++ A E  D 
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M + G     V +NT++   CK    D A E+ E++   G  P+  +YN++ +     GD
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  ++  M + G E D +TY +LI+ LC+ G    A+ LL  M     RPT  +YN 
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +I    +   + +++ +   M E G  P+  TY ++  G+  GG
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 231/477 (48%), Gaps = 32/477 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
            A+T    HLL+  + E   MKL+          ES+Y    M   G +PDVV    LIK
Sbjct: 157 QADTAVYNHLLNV-LAEGSRMKLL----------ESVY--NEMTDRGIQPDVVTLNTLIK 203

Query: 81  KFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +   AV ++E +  +   PD   +  L+ GF +   IE A +V  ++   G SP
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSP 263

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
             VT N++I   C  G +E A     + + D  +P  +TY   +                
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC-------------- 309

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C+ G V  A + +  +   G  PDV +YN ++  L   G+ +E + ++ +M+ RG
Sbjct: 310 ----LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P+  T++ LI +LC   + E+A+D+ R    KGL+PD Y+++ LI+A CK G   L I
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M S GC PD V YN ++   C  G    AL++ +++   GCP +  +YNT+  AL
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A  +  +M + GI    +T+N+LI  LC+   +D+A  L+  M     +P+ 
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I+YN I+  +CK   + ++ ++L  M   G + +  TY  LI G+   G    A++L
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 602



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 234/459 (50%), Gaps = 23/459 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ +++L +I+  +A+G +PD V     +    Q    + A++VM+++ + G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDVF YN +I+   K  +++ A  +++++  RG  PD  T+N +I +LCS+  +E A 
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +L      P V T+ ILI A                  +CK G      +    ++
Sbjct: 391 DLARELTVKGLSPDVYTFNILINA------------------LCKVGDPHLGIRLFEEMK 432

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S GC PD ++YN+L+  L +MGK      L+ EM S G   + VTY+ +I +LC+  + E
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A +V       G++  A +++ LI   CK  R+D A E ++ M+ +G  P  + YN+IL
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G+  +A +I E ++  G   +V +Y T+ + L  +G    AL ++  M  KGI 
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIE 460
           P    YN +I  L R   + +A+ L  +M      P  ++Y I+  G C+    I E+ +
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672

Query: 461 VLAAMFEKGCKPNETTYVLLIEG---IGYGGWRAEAMEL 496
            L  M  KG  P  +++ +L EG   +G   +   A+EL
Sbjct: 673 FLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIEL 711



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 234/464 (50%), Gaps = 20/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEIL 98
           + ++I++   AG FD     +  M   G +    +    ++ + + R+ + AV  V   L
Sbjct: 92  YEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQL 151

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             +G + D   YN L++   + ++++L   V + +  RG  PDVVT N +I +LC    +
Sbjct: 152 NTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQV 211

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A  + +++      P   T+T L+Q  + EG  + A+++  +M               
Sbjct: 212 RTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM--------------- 256

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +E+ GC P  ++ N+L+     MG+ E+    + + I+ G EP+ VTY+  +  LC++
Sbjct: 257 --MET-GCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQN 313

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G    A+ V+    ++G  PD ++Y+ +I+   K+G LD A   ++ M+  GCLPD   +
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT++ A C     ++AL++  +L+  G  P+V ++N + +AL   GD    + +  EM S
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 433

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  PDE+TYN LI  LC  G +  A+ LL +MES     + ++YN II   CK  RI E
Sbjct: 434 SGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEE 493

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + EV   M   G   +  T+  LI+G+       +A EL   +V
Sbjct: 494 AEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 537



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 38/336 (11%)

Query: 213 AFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           A Q + S  +R    P    Y  +++ L   G ++  E L+ EM   G E         +
Sbjct: 72  ALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFV 131

Query: 272 SSLCRDGKTEDAVDVLR------------------------------------AAKEKGL 295
            S  R  + +DAVD++R                                       ++G+
Sbjct: 132 ESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGI 191

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  + + LI A C+  ++  A+  L+ M S    PD   + T++  F + G+ + AL 
Sbjct: 192 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALR 251

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+ + GC P   + N + +     G    ALG I + ++ G EPD++TYN+ + CLC
Sbjct: 252 VKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLC 311

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           ++G V  A+ ++  M      P V +YN +I    K   ++E+  ++  M ++GC P+ T
Sbjct: 312 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 371

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           T+  LI  +       EA++LA  L ++  +S D +
Sbjct: 372 TFNTLIVALCSQNRLEEALDLAREL-TVKGLSPDVY 406



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F++    +  LI    +AG+   +L  +  M   G +P       +I+  F+      A+
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 635

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            +   + + GE PD   Y  +  G C+    I+ A   L  + ++GF P+  ++ ++   
Sbjct: 636 SLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695

Query: 151 LCSRGM 156
           L + GM
Sbjct: 696 LLNLGM 701


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 234/461 (50%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D++L     MV    +P V    K +  F ++++ +  V +   ++ +G   +V++ N L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+  C+ N ++ A  +L ++   G  P   T+N +I  LC+ G I+ A ++F++++R   
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P VI+Y  +I      G T  A+ +  +M                  +CK  +V  A +
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +  RG  P+V +YN ++     +G+  E  +L  EM+ R + P+ VT +IL+  LC
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G   +A  V     EKG+ P+  +Y+ L+  YC    ++ A +  + MI  GC P + 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN ++  FCK+   D+A  +  ++      P+  +Y+T+   L   G    AL +  EM
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G+ P+ +TY+ L+   C+ G +DEA+ LL  M+  +  P ++ + I+I G     ++
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + E+ + +F  G +P   TY ++I+G+   G   EA +L
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 223/452 (49%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R    D ++  +  M   G  P       LI     E K  +AV +  E++ +  EP+V 
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVI 194

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN +I+G CK     +A  V  ++   G  PDVVTYN +I SLC   ++  A +   ++
Sbjct: 195 SYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L     P V TY  ++    + GQ ++A +L  EM                 G+CK+GMV
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A     ++  +G +P++ +YN L+          E +K+   MI +G  P V +Y+IL
Sbjct: 315 SEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C+  + ++A  +L     K L PD  +Y  L+   C+ GR   A+     M S G 
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP++V Y+ +L  FCK+G+ D+AL++ + + +    PN+  +  +   ++ +G    A  
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKE 494

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + S++ + GI P   TY  +I  L ++G+ DEA  L   ME   F P   SYN++I GF 
Sbjct: 495 LFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 554

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           + +  + +I ++  M  K    N +T+ +L++
Sbjct: 555 QNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 193/392 (49%), Gaps = 18/392 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    ++   + M  NGCKPDVV    +I    ++R  N A+  + E+L++   P+VF
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN ++ GFC   Q+  A ++   +  R   PD VT  I++  LC  GM+  A  VF+ +
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P + TY  L+    L+   ++A K+ + M                 G CK   +
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +  +   PD ++Y+ L++ L   G+ +E   +  EM S GL PN+VTYSIL
Sbjct: 385 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSIL 444

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+ G  ++A+ +L++ +EK L P+   +  LI      G+L++A E    + +DG 
Sbjct: 445 LDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGI 504

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P I  Y  ++    K G +D+A ++F K+ D G  PN  SYN M      + D   A+ 
Sbjct: 505 RPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +I EM+ K    +  T+  L+    +D ++ +
Sbjct: 565 LIDEMVGKRFSANLSTFQMLLDLESQDEIISQ 596



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 183/363 (50%), Gaps = 17/363 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------ 204
           I+ A   F +++R N +P+V  +   + +   + Q    + L ++M +            
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V  A   +  +   G  P   ++N L+  L N GK +E  +L  EM+ RG
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            EPNV++Y+ +I+ LC+ G T  AVDV +  ++ G  PD  +Y+ +I + CKD  ++ A+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           EFL  M+  G  P++  YN ++  FC  G  ++A  +F+++      P+  +   +   L
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  +   M  KG+EP+  TYN+L+   C   +++EA  +   M      P V
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI+I GFCK+RR++E+  +LA M+ K   P+  TY  L++G+   G   EA+ +   
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 500 LVS 502
           + S
Sbjct: 429 MCS 431



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 73/150 (48%)

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           N + D AL  F ++  +   P+V+ +     +          + + ++M   G+  +  +
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            N LI+CLCR   VD AV +L  M      PT  ++N +I G C   +I E++E+   M 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +G +PN  +Y  +I G+   G  + A+++
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDV 215


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 239/460 (51%), Gaps = 18/460 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++   + M+ +   P +V  ++        ++ N  +   + +E  G   +++  N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  +   A  VL ++   G+ PD  T+N +I  LC    +  A  +  +++ +
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P V+TY  ++      G T  A+ LL +M                  +C+ G +  A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               + +E++G +  +++YN L+  L   GKW +G +L+ +M SR + PNV+T+++LI  
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++GK ++A ++ +    KG++P+  +Y+ L+  YC   RL  A   LD M+ + C PD
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV + +++  +CK    D+ +++F K+S  G   N  +Y+ +      SG    A  +  
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S G+ PD +TY  L+  LC +G +++A+ +  D++ ++    ++ Y III G CK  
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  +  ++  KG KPN  TY ++I G+   G  +EA
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 224/450 (49%), Gaps = 18/450 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+  L F + M  NG   ++     +I  F +  K+  A  V+  + K G EPD   +N
Sbjct: 80  QFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 139

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI+G C  +++  A  ++ R+   G  P+VVTYN ++  +C  G    A  +  ++   
Sbjct: 140 TLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDER 199

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           N K  V TY+ +I +   +G  D A+ L  EM                 G+CK G     
Sbjct: 200 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDG 259

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            Q ++ + SR   P+VI++N+L+   +  GK +E  +L  EMI++G+ PN +TY+ L+  
Sbjct: 260 VQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDG 319

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C   +  +A ++L        +PD  ++  LI  YCK  R+D  ++    +   G + +
Sbjct: 320 YCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVAN 379

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V Y+ ++  FC++G  + A E+F+++  +G  P+V +Y  +   L  +G   +AL +  
Sbjct: 380 TVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE 439

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++    +  D + Y  +I  +C+ G V++A  L   +     +P V++Y ++I G CK  
Sbjct: 440 DLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 499

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            ++E+  +L  M E G +PN+ TY  LI  
Sbjct: 500 SLSEANILLRKMEEDGNEPNDCTYNTLIRA 529



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 216/460 (46%), Gaps = 19/460 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L ++   T F  LI       K  E++  +  MV NGC+P+VV    ++    +   ++ 
Sbjct: 129 LGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSL 188

Query: 91  AVRVMEIL-EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ ++  + E+  + DVF Y+ +I   C+   I+ A  +   + ++G    +VTYN ++G
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G      ++   +      P VIT+ +LI   + EG+  +A +L  EM       
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM------- 301

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                       ++G  P+ I+YN L+       +  E   ++  M+     P++VT++ 
Sbjct: 302 -----------ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   C+  + ++ + + R   ++GL  +  +Y  L+  +C+ G+L++A E    M+S G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            LPD++ Y  +L   C NG  ++ALEIFE L       ++  Y  +   +   G    A 
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   +  KG++P+ +TY  +IS LC+ G + EA  LL  ME     P   +YN +I   
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
            +   +  S +++  M   G   + ++  ++I+ +    W
Sbjct: 531 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVW 570



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 18/401 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++     P +  ++   SG     Q  L      ++   G + ++ T NIMI   C   
Sbjct: 55  EMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCC 114

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A+ V  ++++   +P   T+  LI                   G+C +  V +A  
Sbjct: 115 KTCFAYSVLGKVMKLGYEPDTTTFNTLIN------------------GLCLESKVSEAVV 156

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V  +   GCQP+V++YN ++  +   G       L+ +M  R ++ +V TYS +I SLC
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           RDG  + A+ + +  + KG+     +Y+ L+   CK G+ +  ++ L  M S   +P+++
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI 276

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++  F K G   +A E+++++   G  PN  +YN++            A  M+  M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +     PD +T+ SLI   C+   VDE + L   +         ++Y+I++ GFC++ ++
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             + E+   M   G  P+  TY +L++G+   G   +A+E+
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI 437



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 145/282 (51%), Gaps = 1/282 (0%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + Y   LR+ +   K ++   L  EMI     P++V +S   S +    +    +D  + 
Sbjct: 31  VCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKK 90

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +  G+  + Y+ + +I+ +C+  +   A   L  ++  G  PD   +NT++   C    
Sbjct: 91  MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A+ +  ++ + GC PNV +YN++ + +  SGD   AL ++ +M  + ++ D  TY++
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I  LCRDG +D A+ L  +ME+   + ++++YN ++ G CK  + N+ +++L  M  + 
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             PN  T+ +LI+     G   EA EL   +++   IS +T 
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMIT-KGISPNTI 311


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 248/489 (50%), Gaps = 38/489 (7%)

Query: 16  VRVSSSAET-RPNTHL--------LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           +R+ S  +T RP   L        L  D     +  ++   + +G+ D +    + M+A 
Sbjct: 151 IRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLAR 210

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
              PDVV   KL+    ++    ++ R++ ++L++   P++F +N  + G C+   ++ A
Sbjct: 211 CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA 270

Query: 126 ---------NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
                     + L ++ + GF PD +TYN +I   C +GM++ A +V    +    KP  
Sbjct: 271 VRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            TY  LI     +G  D+AM +       K G+             +G +P ++ YN L+
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVF------KDGL------------GKGLRPSIVLYNTLI 372

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           + L   G      +LM EM   G  PN+ TY+++I+ LC+ G   DA  ++  A  KG  
Sbjct: 373 KGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCP 432

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD ++Y+ LI  YCK  +LD A E ++ M S G  PD++ YNT+L   CK G +++ +EI
Sbjct: 433 PDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEI 492

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F+ + + GC PN+ +YN +  +L  +     A+ ++ EM SKG++PD +++ +L +  C+
Sbjct: 493 FKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552

Query: 417 DGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
            G +D A  L   ME       T  +YNII+  F +   +N ++++ + M   GC P+  
Sbjct: 553 IGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612

Query: 476 TYVLLIEGI 484
           TY ++I+G 
Sbjct: 613 TYRVVIDGF 621



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 223/423 (52%), Gaps = 10/423 (2%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M   G + DV   T  IK F +  +   A+R++  + + G + +  AY  +++G   + +
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
            + A ++ D + +R   PDVV +N ++  LC +G++  + ++  ++L+    P + T+ I
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            +Q    EG  D+A++            V +A +++R + + G +PD ++YN ++     
Sbjct: 257 FVQGLCREGALDRAVR---------NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCK 307

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G  ++  +++ + + +G +P+  TY  LI+  C+DG  + A+ V +    KGL P    
Sbjct: 308 KGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVL 367

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ LI    + G +  A++ ++ M  +GCLP+I  YN ++   CK G    A  + +   
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             GCPP++ +YNT+            A  M++ M S+G+ PD ITYN+L++ LC+ G  +
Sbjct: 428 AKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSE 487

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           E + +   ME     P +I+YNII+   CK +++NE++++L  M  KG KP+  ++  L 
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLF 547

Query: 482 EGI 484
            G 
Sbjct: 548 TGF 550



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 227/451 (50%), Gaps = 27/451 (5%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           +K + ++ K  +AV   E ++ Y  +P V ++NA+++   +      A+KV  R+R RG 
Sbjct: 83  MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
             DV TY I I S C      +A ++   +    C    + Y  ++      G+ D A +
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L DEM                  +CKKG+V ++ + +  +  RG  P++ ++N+ ++ L 
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262

Query: 241 NMGKWE---------EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
             G  +         E E+ + +M++ G EP+ +TY+ +I   C+ G  +DA  VL+ A 
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG  PD ++Y  LI+ +CKDG  D A+      +  G  P IV YNT++    + G   
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            AL++  ++++ GC PN+ +YN + + L   G    A  ++ + ++KG  PD  TYN+LI
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C+   +D A  ++  M S    P VI+YN ++ G CK  +  E +E+  AM EKGC 
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           PN  TY ++++ +       EA++L   + S
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 232/508 (45%), Gaps = 68/508 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    + G   ES   +  ++  G  P++      ++   +E   ++AVR   ++E
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278

Query: 100 KYG----------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
                        EPD   YN++I G+CK   ++ AN+VL     +GF PD  TY  +I 
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C  G  + A  VF   L    +P+++ Y  LI+    +G    A++L++EM       
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G+CK G V  A   V    ++GC PD+ +YN L+       K +   +++
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M S+G+ P+V+TY+ L++ LC+ GK+E+ +++ +A +EKG TP+  +Y+ ++ + CK 
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF---EKLSDV------ 363
            +++ A++ L  M S G  PD+V++ T+   FCK G+ D A ++F   EK  DV      
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578

Query: 364 ---------------------------GCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
                                      GC P+  +Y  +       G+  +    + E +
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM 638

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            K   P   T+  +++CLC    V EAVG++  M      P  +  N I   F   +++ 
Sbjct: 639 EKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTI---FEADKKVV 693

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            + ++L     K       TY LL +GI
Sbjct: 694 AAPKILVEDLLKKGHIAYYTYELLYDGI 721



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 165/358 (46%), Gaps = 27/358 (7%)

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVG 211
           D  K T  TY  ++Q     G+ ++  KLL EM                     +KG V 
Sbjct: 34  DGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQ 93

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++   C P V S+N ++  L+  G   +  K+   M  RG++ +V TY+I I
Sbjct: 94  EAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRI 153

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            S C+  +   A+ +LR   E G   +A +Y  +++     G  D A E  D M++    
Sbjct: 154 KSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLC 213

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL-- 389
           PD+V +N ++   CK G   ++  +  K+   G  PN+ ++N     L   G   RA+  
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273

Query: 390 -------GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                    + +M++ G EPD++TYNS+I   C+ GMV +A  +L D     F+P   +Y
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +I GFCK    + ++ V      KG +P+   Y  LI+G+   G    A++L N +
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 254/483 (52%), Gaps = 36/483 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  L+K      +  E+    E M   GC+P+V+  + L+    +  + ++A R+ E ++
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG--- 155
           EK   PD+ AY + ++G CKAN++  A     ++ ++G   D V ++ +IG LC +G   
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 156 --------------MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
                         M++ A K F++++  N  P+   +  LI A        K+ +L D 
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC------KSKRLPDG 320

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + +         FQ ++S++   C P++ +YN+++  L    + +E ++L+ EM + GL 
Sbjct: 321 VLL---------FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTYS L+  LC+ GK + A D+L    ++G+ PD+++   +++A  K G++D A+  
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M + G  PD+V YNT+L   CK G  D+A+    K+    C P+V SY  + +AL  
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG    A  +  EM+ +G+ PD + Y+SL+  L R+G+ D A+ LL   +++  +P  + 
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVM 548

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + +++ G CK  +  ++ EV+  M + G   +  TY+ ++ G+   G   +A +L +   
Sbjct: 549 HKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDAS 608

Query: 502 SMH 504
             H
Sbjct: 609 ETH 611



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 225/520 (43%), Gaps = 121/520 (23%)

Query: 87  KSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           K +  VR+ + L  +K  +  VF YN  +    KAN  +LA +   +++ RG+ PD  TY
Sbjct: 17  KISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTY 76

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           +I++  LC  G ++ A ++  QL     K  VITY+++I                   G 
Sbjct: 77  SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID------------------GC 118

Query: 205 CKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           CK   V  A +  +++ S G C PDV+++N LL+ L +  +  E   L   M   G EPN
Sbjct: 119 CKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPN 178

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V++YS L+  LC+ G+ ++A  +     EK   PD  +Y   ++  CK  R+  A +   
Sbjct: 179 VISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCR 238

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNA-----------------DQALEIFEK------- 359
            M++ G   D V ++T++   CK G+A                 D+A + FE+       
Sbjct: 239 KMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP 298

Query: 360 -------------------------------LSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
                                          + +  CPPN+ +YN M   L  +     A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM------------------ 430
             +++EM + G+ PD +TY++L+  LC+ G +D A  LL +M                  
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 431 --------------ESTRFR---PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
                         E+ + R   P +++YN ++ G CK  RI+E+I  LA M    C P+
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
             +Y ++I  +   G  A A          HAI ++  KR
Sbjct: 479 VFSYTIIITALCRSGQAAGA----------HAIFQEMVKR 508



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 313 GRLDLAIEFLDYM-ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           G++   +   D++    G    +  YN  L A  K      A E F+++   G PP+  +
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y+ +   L  +G+  +A  ++ ++   G++ + ITY+ +I   C+   VD+A+ +   M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 432 STR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           S     P V+++N ++ G C   R++E+  +   M + GC+PN  +Y  L++G+   G  
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 491 AEAMELANALV 501
            EA  L   +V
Sbjct: 196 DEACRLWEEMV 206


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 243/490 (49%), Gaps = 16/490 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKFD +   I+ M+  G  PD    +K+I    +  K  KA  + + ++  G  PDV+ Y
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A    D +RS G S +VVTY  ++ +      +  A  +F++++ 
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P  ITY+ L+      G+  KA ++  ++ +     VG  F F     +    P+V
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKL-IGTSDNVGSDFYF-EGKHTDSIAPNV 444

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+  L    K  + ++L+  M+S G EPN + Y  LI   C+ GK ++A +V   
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             + G  P  ++Y  LI A  KD RLDLA++ L  M+   C P++V Y  ++   C+ G 
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +AL++   + + GC PNV +Y  +   L  SG    +L +  +M +KG  P+ +TY  
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++DEA  LL +M+ T +   +  Y  ++ GF  +++   S+ +L  +   G
Sbjct: 625 LINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHG 682

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV----SMHAISRDTFKRLNRTFPL----- 520
             P    Y LLI+     G   EA+EL   ++    S++  S+D +  L +   L     
Sbjct: 683 TVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLE 742

Query: 521 --LDVYKEIS 528
              ++Y EI+
Sbjct: 743 KAFELYSEIT 752



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 237/530 (44%), Gaps = 75/530 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           ++I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++ K 
Sbjct: 112 QMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKE 171

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC------SR 154
           G  P+   +N+L+  +C A     A K+L R+   G  P  V YNI IGS+C      S 
Sbjct: 172 GCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSP 231

Query: 155 GMIESAFKVFDQLLRDNC-----------------------------------KPTVITY 179
            ++  A KV++++L  +C                                    P   TY
Sbjct: 232 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTY 291

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
           + +I       + +KA  L  EM                   CK G++ QA  +   + S
Sbjct: 292 SKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 351

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC  +V++Y  LL   L   +  +   +   MI  G  PN +TYS L+  LC+ G+ + 
Sbjct: 352 IGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQK 411

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        + P+  +Y  LI   CK  ++  A E LD M+
Sbjct: 412 ACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAML 471

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S+GC P+ + Y+ ++  FCK G  D A E+F ++S  G  P V +Y ++  A++      
Sbjct: 472 SNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLD 531

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+M+     P+ +TY ++I  LCR G   +A+ LL  ME     P V++Y  +I
Sbjct: 532 LAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALI 591

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G  K+ +++ S+++   M  KGC PN  TY +LI      G   EA  L
Sbjct: 592 DGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSL 641



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 67/500 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           + G++ ++L  IE       K D V+CT++I    +    ++A+  +  +      P+V 
Sbjct: 87  KEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVV 143

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L++GF K  Q+    ++++ +   G +P+   +N ++ S C+      A+K+  ++
Sbjct: 144 TYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C P  + Y I I  ++  G+   +  LL             A +    + +  C  
Sbjct: 204 ADCGCPPGYVAYNIFI-GSICGGEELPSPDLL-----------ALAEKVYEEMLASSCVL 251

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++     R L  MGK++   +++  M+ +G  P+  TYS +I+ LC   K E A  + 
Sbjct: 252 NKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  K  G+ PD Y+Y  LI ++CK G ++ A  + D M S GC  ++V Y  +L A+ K 
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD----------------------- 384
               QA +IF ++ D GCPPN  +Y+ +   L  +G+                       
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFY 431

Query: 385 ----------------------------KIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
                                        + A  ++  MLS G EP+ I Y++LI   C+
Sbjct: 432 FEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +D A  + + M    + PTV +Y  +I    K RR++ +++VL+ M E  C PN  T
Sbjct: 492 VGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVT 551

Query: 477 YVLLIEGIGYGGWRAEAMEL 496
           Y  +I+G+   G   +A++L
Sbjct: 552 YTAMIDGLCRIGECQKALKL 571



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 176/411 (42%), Gaps = 28/411 (6%)

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           L+ +G  P    YNAL+     A Q+++  +V   +   GF  D  T      +LC  G 
Sbjct: 31  LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              A  + +   R++ K   +  T +I   M          L DE           A  F
Sbjct: 91  WSDALVMIE---REDFKLDTVLCTQMISGLM-------EASLFDE-----------AISF 129

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +  +    C P+V++Y  LL   L   +    ++++  M+  G  PN   ++ L+ S C 
Sbjct: 130 LHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCN 189

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD------LAIEFLDYMISDGC 330
                 A  +L+   + G  P   +Y+  I + C    L       LA +  + M++  C
Sbjct: 190 ARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSC 249

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           + + VN        C  G  D A +I + +   G  P+ S+Y+ + + L  +    +A  
Sbjct: 250 VLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFL 309

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EM S G+ PD  TY  LI   C+ G++++A     +M S      V++Y  ++  + 
Sbjct: 310 LFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYL 369

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           K +++ ++ ++   M + GC PN  TY  L++G+   G   +A E+   L+
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 54/275 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   F+  + D ++  +  MV + C P+VV  T +I    +  +  KA++++ ++E
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y ALI G  K+ +++L+ ++  ++ ++G +P+ VTY ++I   C+ G+++
Sbjct: 577 EKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLD 636

Query: 159 SAFKVFDQL--------LRDNCK-------------------------PTVITYTILIQA 185
            A  +  ++        L+  C                          P    Y +LI  
Sbjct: 637 EAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDN 696

Query: 186 TMLEGQTDKAMKLLDEM--------------------GMCKKGMVGQAFQFVRSLESRGC 225
               G+ ++A++L  EM                     +C    + +AF+    +  +G 
Sbjct: 697 FSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGV 756

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            P++  +  L++ L+ + KW E  +L   +   G+
Sbjct: 757 VPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 107/313 (34%), Gaps = 73/313 (23%)

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           E+   G  P+  TY+ L+  L   G+ +    V +   E G   D ++      A CK+G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 314 R--------------------------------LDLAIEFLDYMISDGCLPDIVNYNTIL 341
           R                                 D AI FL  M  + C+P++V Y T+L
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             F K         I   +   GC PN S +N++  +  ++ D   A  ++  M   G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 402 PDEITYNSLIS-----------------------------------------CLCRDGMV 420
           P  + YN  I                                          CLC  G  
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           D A  ++  M    F P   +Y+ +I   C+  ++ ++  +   M   G  P+  TY +L
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 481 IEGIGYGGWRAEA 493
           I+     G   +A
Sbjct: 330 IDSFCKAGLIEQA 342



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 39/211 (18%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK------------------- 80
           +  LI    ++GK D SL     M   GC P+ V    LI                    
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646

Query: 81  -----KFFQ---------ERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELA 125
                K+ Q          +K   ++ ++E LE +G  P    Y  LI  F KA ++E A
Sbjct: 647 QTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEA 706

Query: 126 NKVLDRLRSRGFSPDVVT---YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
            ++   +     S ++ +   Y  +I +LC    +E AF+++ ++ R    P +  +  L
Sbjct: 707 LELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCL 766

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           I+  +   + ++A++L     +C +G+  Q+
Sbjct: 767 IKGLIKVNKWNEALQLC--YSICDEGVNWQS 795


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 224/422 (53%), Gaps = 24/422 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y +LI G CKA +++ A ++LD +R RG  P V  +N +I  LC  G    A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMC 205
           F  +    C P +IT+ IL+ A +  G+ ++A ++ + M                  G+C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A + +  +   GC P+VI+Y++L+  L   G+ ++G  L+ EM  RG +P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ L++ LC+  + ++A+++++     G  P   +Y+ L+  +C+  ++D A   +  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL---W-- 380
              GC PD++NYNT++A  C++   D A  + +++    C P+V +Y+T+   L   W  
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 381 SSGDKIRALGMISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            +  K+ A   I EM+ + G  P+  TY  +I  LCR     +A+ LL  M  +   P +
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            S++++I   CK+  ++ + ++   M E+ CKPN   Y  LI+G+  GG   +A+ +   
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 500 LV 501
           +V
Sbjct: 448 MV 449



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 233/523 (44%), Gaps = 94/523 (17%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI    +AGK D++   ++ M   G  P V +                      
Sbjct: 30  EFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV---------------------- 67

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                       +N +I G CKA +   A      +     +PD++T+NI++ +L   G 
Sbjct: 68  ------------HNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 157 IESAFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
           +E AF++F+ +     C P V+TYT +I     +G+ D+A++LLD M             
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G   + F  ++ +  RG QPDVI YN LL  L    + +E  +L+  MI  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P VVTY+ L+   CR  + + A  +++   E+G  PD  +Y+ +I+  C+D RLD A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD------QALEIFEKLSDVGCPPNVSSY 372
              L  M++  C+PD++ Y+TI+   CK+   D       A EI E +   GCPPN  +Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPD----------------------------- 403
             +   L  +    +AL ++  M+   + PD                             
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415

Query: 404 ------EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
                  + Y +LI  L + G VD+AV +  ++    FRP V +YN ++ G C   RI E
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEE 474

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++ ++  M  K C P+  +Y  LI G+       EA EL  A+
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 249/488 (51%), Gaps = 34/488 (6%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM-VANGCKPDVVMCTKLIK 80
           A T+    +++F++       L+    ++G+ +E+    ESM  ++ C P+VV  T +I 
Sbjct: 92  AGTKCTPDIITFNI-------LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144

Query: 81  KFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              ++ K ++A+ +++++ + G  P+V  Y+ L+ G CKA + +    +L  +  RGF P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DV+ YN ++  LC    ++ A ++   ++R  C PTV+TY  L++               
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL-------------- 250

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V +AF+ ++ +  RGC PDVI+YN ++  L    + ++ + L+ +M++  
Sbjct: 251 ----FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 260 LEPNVVTYSILISSLCR------DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
             P+V+TYS +I  LC+      D K E A ++L   K+ G  P+A +Y  +I   C+  
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +   A+  L  MI    +PD+ +++ ++ + CK+ + D A +IF  +S+  C PN  +Y 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L   G+  +A+  + E++ +   P   TYNS++  LC  G ++EAV ++  M   
Sbjct: 427 ALIDGLSKGGEVDKAV-RVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P   SY  +I G C+   + E+ E+  A+  KG       Y +L+  +      ++A
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545

Query: 494 MELANALV 501
             +AN L+
Sbjct: 546 HGVANKLI 553



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 189/366 (51%), Gaps = 25/366 (6%)

Query: 166 QLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           QL R+  C P   TY  LI      G+ D+A +LLDEM                 G+CK 
Sbjct: 19  QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKA 78

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVT 266
           G  G A  + +++    C PD+I++N+L+  L+  G+ EE  ++   M  S    PNVVT
Sbjct: 79  GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I+ LC+DGK + A+++L    E G  P+  +Y  L+   CK GR D     L  M 
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  PD++ YNT+L   CK+   D+ALE+ + +   GC P V +YN++      S    
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA  +I  M  +G  PD I YN++I+ LCRD  +D+A  LL  M + R  P VI+Y+ II
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 447 LGFCKTRRIN------ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            G CK  R++       + E+L  M + GC PN  TY ++IEG+       +A+ L   +
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 501 VSMHAI 506
           +    +
Sbjct: 379 IDSEVV 384


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 229/459 (49%), Gaps = 21/459 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK----YGEPDVFAYNALIS 114
            ++ M   GC PD V    L+K    E+++ +A+ ++ ++         P+V +Y+ +I+
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GF    Q++    +   +  RG  PDVVTY  +I  LC   + + A  VF Q++ +  KP
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFV 217
            + TY  LI   +  G+  + +++L+EM                  +CK G   +A  F 
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            S+  +G +P V +Y ++L      G   E   L+  M++ G+ PN   ++I  S+  + 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G  + A+D+    +++GL+PDA SY  LI A CK GR+D A    + MI++G  PDIV +
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++++   C     ++  E+F ++ +VG  PN+  +NT+   L   G  +    ++  +  
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ PD I+YN+LI   C  G +DEA  LL  M S   +P   SYN ++ G+CK  RI+ 
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDS 571

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +      M   G  P   TY  ++ G+      +EA EL
Sbjct: 572 AYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 227/454 (50%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A  FD +    + M+ NG KP++     LI  +    K  + VR++E +   G +P+  
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC 309

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y +L++  CK  +   A    D +  +G  P V TY IM+    ++G +     + + +
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P    + I   A    G  DKAM + ++M                  +CK G V
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A      + + G  PD++ ++ L+  L  + KWE+ E+L  EM++ G+ PN+V ++ +
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + +LC++G+  +   ++ + +  G+ PD  SY+ LI  +C  G +D A + L+ M+S G 
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD  +YNT+L  +CK G  D A   F K+   G  P V +YNT+   L+ +     A  
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M++ G + D  TYN +++ LC+   VDEA+ +  ++ S   +  +I++NI+I    
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R  +++++ AA+   G   N  TY L++E +
Sbjct: 670 KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 22/436 (5%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQI-ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           IL+     D    N L++G C   ++ E  + +L R+   G  PD V+YNI++  LC+  
Sbjct: 120 ILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEK 179

Query: 156 MIESAFKVFDQLLRD---NCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             E A ++   +  D   +C P V++Y+ +I     EGQ DK   L  EM          
Sbjct: 180 RAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVV 239

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+CK  +  +A    + +   G +P++ +YN L+   L++GKW+E  +++ EM
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            + G +PN  TY  L++ LC++G+  +A     +   KG+ P   +Y  ++  Y   G L
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
               + L+ M+++G  P+   +N   +A+ K G  D+A++IF K+   G  P+  SY  +
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             AL   G    A    ++M+++G+ PD + ++SL+  LC     ++   L  +M +   
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P ++ +N I+   CK  R+ E   ++ ++   G +P+  +Y  LI+G    G   EA +
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539

Query: 496 LANALVSMHAISRDTF 511
           L   +VS+  +  D+F
Sbjct: 540 LLEGMVSV-GLKPDSF 554



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 215/441 (48%), Gaps = 19/441 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+ +F +SM+  G KP V     ++  +  +   ++   ++ ++   G  P+  
Sbjct: 320 KNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHH 379

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N   S + K   I+ A  + +++R +G SPD V+Y  +I +LC  G ++ A   F+Q+
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           + +   P ++ ++ L+       + +K  +L  EM                   + G  P
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM------------------LNVGIHP 481

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +++ +N +L  L   G+  EG++L+  +   G+ P+V++Y+ LI   C  G  ++A  +L
Sbjct: 482 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 541

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL PD++SY+ L+  YCK GR+D A      M+S+G  P +V YNTIL    + 
Sbjct: 542 EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQT 601

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +A E++  + + G   ++ +YN + + L  S     A+ M   + SKG++ + IT+
Sbjct: 602 KRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITF 661

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I  L + G  ++A+ L   + +      V++Y +++    +   + E   + +AM +
Sbjct: 662 NIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEK 721

Query: 468 KGCKPNETTYVLLIEGIGYGG 488
            G  PN      L+  + + G
Sbjct: 722 NGTAPNSQMLNALVRRLLHRG 742



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 234/471 (49%), Gaps = 34/471 (7%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E L+F   M+  G  P++V    ++    +E +  +  R+++ +E  G  PDV +YN LI
Sbjct: 468 EELFF--EMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 525

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G C A  I+ A+K+L+ + S G  PD  +YN ++   C  G I+SA+  F ++L +   
Sbjct: 526 DGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGIT 585

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P V+TY  ++       +  +A +L   M                 G+CK   V +A + 
Sbjct: 586 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKM 645

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            ++L S+G Q ++I++N+++  LL  G+ E+   L   + + GL  NVVTY +++ +L  
Sbjct: 646 FQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIE 705

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  E+   +  A ++ G  P++   + L+      G +  A  +L  +       +   
Sbjct: 706 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 765

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEM 395
            + +++ F  +     A  + +K   +      +  N+  SAL     +I  A  +  EM
Sbjct: 766 TSMLISIFSSDEYQHHAKSLPKKYRIL------NEANS--SALIKKARRIDDAYSLFREM 817

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L KG+ PD +TYN+++  L + G   EA  L + M ++R +  + +YNII+ G CK+  +
Sbjct: 818 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALV 501
           +E+ ++  ++  KG + N  T+ ++I  +  GG + +AM+L     AN LV
Sbjct: 878 DEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 928



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 233/523 (44%), Gaps = 55/523 (10%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ- 84
           PN H+  F++  + + K        G  D+++     M   G  PD V    LI    + 
Sbjct: 376 PNHHI--FNIFFSAYAK-------CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL 426

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            R  +  V+  +++ +   PD+  +++L+ G C  ++ E   ++   + + G  P++V +
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFF 486

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           N ++ +LC  G +    ++ D +     +P VI+Y  LI    L G  D+A KLL+ M  
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G CK G +  A+   R + S G  P V++YN +L  L    ++ E
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            ++L   MI+ G + ++ TY+I+++ LC+    ++A+ + +    KGL  +  +++ +I 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A  K GR + A++    + ++G + ++V Y  ++    + G+ ++   +F  +   G  P
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM-------- 419
           N    N +   L   GD  RA   +S++  +    +  T + LIS    D          
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 420 --------------------VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
                               +D+A  L  +M      P V++YN I+ G  +T R +E+ 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E+  +M     + N  TY +++ G+       EA ++  +L S
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCS 889



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 187/414 (45%), Gaps = 47/414 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           +AG+ D +      M++NG  P VV    ++   FQ ++ ++A  + + ++    + D++
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++G CK+N ++ A K+   L S+G   +++T+NIMIG+L   G  E A  +F  +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
             +     V+TY ++++  + EG  ++   L   M                  E  G  P
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM------------------EKNGTAP 726

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG--------- 278
           +    N L+R LL+ G        ++++  R       T S+LIS    D          
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 279 -------------------KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
                              + +DA  + R    KGLTPD  +Y+ ++    + GR   A 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E    MI+     +I  YN IL   CK+   D+A ++F+ L   G   N+ ++N M  AL
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
              G K  A+ + + + + G+ PD +TY  +   L  +G ++E  GL + ME +
Sbjct: 907 LKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKS 960



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 39/280 (13%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE- 320
           PN  TYSILI   CR G  E          + G   D    + L++  C   R+  A++ 
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFS 377
            L  M   GC+PD V+YN +L   C    A++ALE+   ++D     CPPNV SY+T+ +
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
             ++ G   +   +  EM+ +GI PD +TY ++I  LC+  + D A  +   M     +P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 438 TVISYNIIILGF-----------------------------------CKTRRINESIEVL 462
            + +YN +I G+                                   CK  R  E+    
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +M  KG KP+ TTY +++ G    G  +E  +L N +V+
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVA 371



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 48/330 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G+ ++++    ++ ANG   +VV    +++   +E    +   +   +E
Sbjct: 661 FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM-- 156
           K G  P+    NAL+        I  A   L +L  R FS +  T +++I    S     
Sbjct: 721 KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQH 780

Query: 157 --------------------------IESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
                                     I+ A+ +F ++L     P V+TY  ++      G
Sbjct: 781 HAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 840

Query: 191 QTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           +  +A +L   M                 G+CK   V +AF+  +SL S+G Q ++I++N
Sbjct: 841 RFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFN 900

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +++  LL  G+ E+   L   + + GL P+VVTY ++  +L  +G  E+  D L    EK
Sbjct: 901 IMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE-FDGLFLTMEK 959

Query: 294 GLTP-DAYSYDPLISAYCKDGRLDLAIEFL 322
             TP D+   + L+    + G +  A  +L
Sbjct: 960 SGTPLDSRLLNALVRRLLQRGDISRAGAYL 989



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 11/159 (6%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSAL-WSSGDKIRA------LGMISEMLSK---GIEP 402
           AL++F++L     P +V ++N + +A+  SSG +         + + + M+      + P
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +  TY+ LI C CR G ++        +  T +R   I  N ++ G C  +R+ E+++VL
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 463 AA-MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
              M E GC P+  +Y +L++G+       EA+EL + +
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMM 191


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 236/488 (48%), Gaps = 53/488 (10%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           F+ G+ D++ +    M+  G  PDVV    LI    + +  +KAV +++ + +K   PD 
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN +I G+C   Q+E A ++L ++   G  PDVVTY+++I   C  G    A  VFD 
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330

Query: 167 LLRDNCKPTVITYTILIQ-----------------------------------ATMLEGQ 191
           ++R   KP    Y IL+                                    A    G 
Sbjct: 331 MVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390

Query: 192 TDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            DKAM    EM                  +CK G V  A      + S G  P++IS+  
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  L ++G+W++ E+L  EMI+RG+ P+ +  + ++ +LC++G+  +A D        G
Sbjct: 451 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 510

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  SY+ LI  YC  G++D +I+ LD M+S G  PD   YN++L  + KNG  + AL
Sbjct: 511 VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            ++ ++          + N M   L+ +G  + A  +  +M+ +G +    TYN+++  L
Sbjct: 571 ALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C +  VDEA+ +  D+ S  F   V +++I+I    K  RI+E+  + +AM  +G  P+ 
Sbjct: 631 CENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDV 690

Query: 475 TTYVLLIE 482
            TY L+I+
Sbjct: 691 ITYSLMIK 698



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 230/468 (49%), Gaps = 22/468 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYG-EPDVFA 108
           G+ D +       +  G +   V   +LIK      +++ A+  V   + + G  PDVF+
Sbjct: 105 GRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFS 164

Query: 109 YNALISGFCKANQIELANKVLDRLRSRG---FSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           YNALI G C   + + A ++L  + + G    SP+VV+YN +I      G ++ A+ +F 
Sbjct: 165 YNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFH 224

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           +++     P V+TY  LI         DKA+ +L  M                 G C  G
Sbjct: 225 EMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLG 284

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A + ++ +   G QPDV++Y++L++    +G+  E   +   M+ +G +PN   Y 
Sbjct: 285 QLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 344

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           IL+      G   D  D+L      G+  +  +++ LI AY K G +D A+     M  +
Sbjct: 345 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 404

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD+V+Y+T++   CK G  + A+  F ++   G  PN+ S+ ++   L S G+  + 
Sbjct: 405 GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 464

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM+++GI PD I  N+++  LC++G V EA      +     +P V+SYN +I G
Sbjct: 465 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +C   +++ESI+ L  M   G +P+  TY  L+ G    G   +A+ L
Sbjct: 525 YCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 228/472 (48%), Gaps = 21/472 (4%)

Query: 52  KFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           K  E+L  +  M A+G   C P+VV    +I  FF+E + +KA  +  E++ +   PDV 
Sbjct: 177 KSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVV 236

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G CKA  ++ A  +L  +  +G  PD  TYNIMI   CS G +E A ++  ++
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P V+TY++LIQ     G+  +A  + D M                 G   KG +
Sbjct: 297 SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 356

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                 +  +   G   +  ++N+L+      G  ++     TEM   GL P+VV+YS +
Sbjct: 357 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTV 416

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ G+ EDAV        +GL+P+  S+  LI   C  G      E    MI+ G 
Sbjct: 417 IHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 476

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD +  NTI+   CK G   +A + F+ +  +G  P+V SYNT+       G    ++ 
Sbjct: 477 HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIK 536

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +  M+S G+ PD  TYNSL++   ++G V++A+ L  +M     +   I+ NI++ G  
Sbjct: 537 QLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLF 596

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  RI  + E+   M ++G +    TY  ++ G+       EA+ +   L S
Sbjct: 597 QAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 201/431 (46%), Gaps = 24/431 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK-VFDQLLRD 170
           LI  FC   +++LA          G+    VT N +I  LC     + A   VF ++   
Sbjct: 97  LIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPEL 156

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P V +Y  LI+   +E ++ +A++LL  + M   G                C P+V+
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELL--IHMTADG-------------GYNCSPNVV 201

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SYN ++      G+ ++   L  EM+ +GL P+VVTY+ LI  LC+    + AV +L+  
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            +KG+ PD  +Y+ +I  YC  G+L+ A+  L  M   G  PD+V Y+ ++  +CK G  
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A  +F+ +   G  PN + Y+ +     + G  I    ++  M+  GI  +   +N L
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I    + G VD+A+    +M     RP V+SY+ +I   CKT R+ +++     M  +G 
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 471 KPNETTYVLLIEGI-GYGGWRAE---AMELANALVSMHAISRDTFK----RLNRTFPLLD 522
            PN  ++  LI G+   G W+     A E+ N  +   AI  +T      +  R     D
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 523 VYKEISHLATK 533
            +  + H+  K
Sbjct: 502 FFDMVIHIGVK 512



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 219/468 (46%), Gaps = 18/468 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+   + G+  E+    +SMV  G KP+  +   L+  +  +        +++++ + G
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 103 EP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            P +  A+N LI  + K   ++ A      +R  G  PDVV+Y+ +I  LC  G +E A 
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             F+Q++ +   P +I++T LI      G+  K  +L  EM                  +
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G V +A  F   +   G +PDV+SYN L+     +GK +E  K +  M+S GL P+ 
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L++   ++G+ EDA+ + R    K +   A + + ++    + GR+  A E    
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G    I  YNT+L   C+N   D+AL +FE L       +V +++ + +AL   G 
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  + S M+ +G  PD ITY+ +I     +G+++E+  L + ME           NI
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           I+    +   +  +   L  + EK      +T  LLI  +    ++ E
Sbjct: 731 IVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKE 778



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 153/292 (52%), Gaps = 10/292 (3%)

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD-VLRAAKE 292
           +L+R    +G+ +         +  G     VT + LI  LC   +T+DA+D V R   E
Sbjct: 96  ILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPE 155

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG---CLPDIVNYNTILAAFCKNGN 349
            G TPD +SY+ LI   C + +   A+E L +M +DG   C P++V+YNT++  F K G 
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  +F ++   G PP+V +YN++   L  +    +A+ ++  M  KG+ PD  TYN 
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C  G ++EAV LL  M  +  +P V++Y+++I  +CK  R  E+  V  +M  KG
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
            KPN T Y +L+ G    G   +  +L + ++      RD     +R F +L
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMI------RDGIPFEHRAFNIL 381



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 46/302 (15%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED-------AVDVLRAAKEKGLTPD 298
           E+   L  E++ +    +V  ++ +++ + R   +         AV +       G+   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 299 AYSYDPLISAYCKDGRLDLAIEF---------------LDYMISDGC------------- 330
           A     LI  +C  GRLDLA                  L+ +I   C             
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 331 --------LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG---CPPNVSSYNTMFSAL 379
                    PD+ +YN ++   C    + +ALE+   ++  G   C PNV SYNT+    
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +  G+  +A  +  EM+ +G+ PD +TYNSLI  LC+   +D+AV +L  M      P  
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            +YNI+I G+C   ++ E++ +L  M   G +P+  TY LLI+     G  AEA  + ++
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330

Query: 500 LV 501
           +V
Sbjct: 331 MV 332


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 224/422 (53%), Gaps = 24/422 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y +LI G CKA +++ A ++LD +R RG  P V  +N +I  LC  G    A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMC 205
           F  +    C P +IT+ IL+ A +  G+ ++A ++ + M                  G+C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A + +  +   GC P+VI+Y++L+  L   G+ ++G  L+ EM  RG +P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ L++ LC+  + ++A+++++     G  P   +Y+ L+  +C+  ++D A   +  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL---W-- 380
              GC PD++NYNT++A  C++   D A  + +++    C P+V +Y+T+   L   W  
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 381 SSGDKIRALGMISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            +  K+ A   I EM+ + G  P+  TY  +I  LCR     +A+ LL  M  +   P +
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            S++++I   CK+  ++ + ++   M E+ CKPN   Y  LI+G+  GG   +A+ +   
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 500 LV 501
           +V
Sbjct: 448 MV 449



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 233/523 (44%), Gaps = 94/523 (17%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI    +AGK D++   ++ M   G  P V +                      
Sbjct: 30  EFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV---------------------- 67

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                       +N +I G CKA +   A      +     +PD++T+NI++ +L   G 
Sbjct: 68  ------------HNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 157 IESAFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
           +E AF++F+ +     C P V+TYT +I     +G+ D+A++LLD M             
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G   + F  ++ +  RG QPDVI YN LL  L    + +E  +L+  MI  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P VVTY+ L+   CR  + + A  +++   E+G  PD  +Y+ +I+  C+D RLD A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD------QALEIFEKLSDVGCPPNVSSY 372
              L  M++  C+PD++ Y+TI+   CK+   D       A EI E +   GCPPN  +Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPD----------------------------- 403
             +   L  +    +AL ++  M+   + PD                             
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415

Query: 404 ------EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
                  + Y +LI  L + G VD+AV +  ++    FRP V +YN ++ G C   RI E
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEE 474

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++ ++  M  K C P+  +Y  LI G+       EA EL  A+
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 249/488 (51%), Gaps = 34/488 (6%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM-VANGCKPDVVMCTKLIK 80
           A T+    +++F++       L+    ++G+ +E+    ESM  ++ C P+VV  T +I 
Sbjct: 92  AGTKCTPDIITFNI-------LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144

Query: 81  KFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              ++ K ++A+ +++++ + G  P+V  Y+ L+ G CKA + +    +L  +  RGF P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DV+ YN ++  LC    ++ A ++   ++R  C PTV+TY  L++               
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL-------------- 250

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+   V +AF+ ++ +  RGC PDVI+YN ++  L    + ++ + L+ +M++  
Sbjct: 251 ----FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 260 LEPNVVTYSILISSLCR------DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
             P+V+TYS +I  LC+      D K E A ++L   K+ G  P+A +Y  +I   C+  
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +   A+  L  MI    +PD+ +++ ++ + CK+ + D A +IF  +S+  C PN  +Y 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L   G+  +A+  + E++ +   P   TYNS++  LC  G ++EAV ++  M   
Sbjct: 427 ALIDGLSKGGEVDKAV-RVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P   SY  +I G C+   + E+ E+  A+  KG       Y +L+  +      ++A
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545

Query: 494 MELANALV 501
             +AN L+
Sbjct: 546 HGVANKLI 553



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 189/366 (51%), Gaps = 25/366 (6%)

Query: 166 QLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           QL R+  C P   TY  LI      G+ D+A +LLDEM                 G+CK 
Sbjct: 19  QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKA 78

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVT 266
           G  G A  + +++    C PD+I++N+L+  L+  G+ EE  ++   M  S    PNVVT
Sbjct: 79  GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I+ LC+DGK + A+++L    E G  P+  +Y  L+   CK GR D     L  M 
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  PD++ YNT+L   CK+   D+ALE+ + +   GC P V +YN++      S    
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA  +I  M  +G  PD I YN++I+ LCRD  +D+A  LL  M + R  P VI+Y+ II
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 447 LGFCKTRRIN------ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            G CK  R++       + E+L  M + GC PN  TY ++IEG+       +A+ L   +
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 501 VSMHAI 506
           +    +
Sbjct: 379 IDSEVV 384


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 231/442 (52%), Gaps = 23/442 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           F  ++    + G F  +L F E  V       P+V+    +IK   +    ++A+ V  E
Sbjct: 154 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +  +  EPDVF Y  L+ G CK ++I+ A  +LD ++  G  P  VT+N++I  LC +G 
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +    K+ D +    C P  +TY  +I    L+G+ DKA+ LLD M   K          
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK---------- 323

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C P+ ++Y  L+  L+  G+  +G  L++ +  RG   N   YS LIS L +
Sbjct: 324 --------CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 375

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K+E+A+ + +   EKG  P+   Y  LI   C++G+LD A E L  M++ GC P+   
Sbjct: 376 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y++++  F K GN+ +A+ ++++++   C PN   Y+ +   L   G    A+ M + ML
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNIIILGFCKTRR 454
            +G+ PD + Y+S+I  LC  G V+  + L  +M  + +  +P V++YNI++   CK   
Sbjct: 496 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 555

Query: 455 INESIEVLAAMFEKGCKPNETT 476
           I+ +I++L +M ++GC P+  T
Sbjct: 556 ISHAIDLLNSMLDRGCNPDLIT 577



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 206/383 (53%), Gaps = 19/383 (4%)

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           SP+V+++N++I ++C  G+++ A +VF ++    C+P V TY  L+     E + D+A+ 
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           LLDEM                 G+CKKG + +  + V ++  +GC P+ ++YN ++  L 
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             GK ++   L+  M++    PN VTY  LI+ L + G++ D V +L + +E+G   + Y
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 364

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LIS   K+ + + A+     M+  GC P+IV Y+ ++   C+ G  D+A EI  ++
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + GC PN  +Y+++    + +G+  +A+ +  EM      P+EI Y+ LI  LC DG +
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF--EKGCKPNETTYV 478
            EA+ +   M     RP V++Y+ +I G C    +   +++   M   E   +P+  TY 
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544

Query: 479 LLIEGIGYGGWRAEAMELANALV 501
           +L+  +      + A++L N+++
Sbjct: 545 ILLRALCKQNSISHAIDLLNSML 567



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 194/375 (51%), Gaps = 22/375 (5%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNC----KPTVITYTILIQATMLEGQTDKAMKL 198
           T+  +I +  + G   + F+VFD++ R+      K  ++ +    +A + E   +   ++
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 199 LDEMGMCKK---------GMVGQAFQFVRSLESRGC--------QPDVISYNMLLRTLLN 241
           +DE   C++          ++ Q   F R+LE   C         P+V+S+N++++ +  
Sbjct: 142 VDEF-QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCK 200

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +G  +   ++  EM  +  EP+V TY  L+  LC++ + ++AV +L   + +G  P + +
Sbjct: 201 LGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT 260

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++ LI+  CK G +    + +D M   GC+P+ V YNTI+   C  G  D+A+ + +++ 
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
              C PN  +Y T+ + L   G  +  + ++S +  +G   +E  Y++LIS L ++   +
Sbjct: 321 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 380

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA+GL   M     +P ++ Y+ +I G C+  +++E+ E+L  M  KGC PN  TY  LI
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440

Query: 482 EGIGYGGWRAEAMEL 496
           +G    G   +A+ +
Sbjct: 441 KGFFKTGNSQKAIRV 455



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 172/377 (45%), Gaps = 35/377 (9%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK D+++  ++ MVA+ C P+ V    LI    ++ +S   V ++  LE+ G   + +AY
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + LISG  K  + E A  +  ++  +G  P++V Y+ +I  LC  G ++ A ++  +++ 
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 426

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P   TY+ LI+     G + KA+++  EM                      C P+ 
Sbjct: 427 KGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA------------------KNNCVPNE 468

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           I Y++L+  L   GK  E   + T M+ RGL P+VV YS +I  LC  G  E  + +   
Sbjct: 469 ICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 528

Query: 290 --AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +E    PD  +Y+ L+ A CK   +  AI+ L+ M+  GC PD++  N  L A  + 
Sbjct: 529 MLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 588

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            N  Q    F               + +   L      + A  +I  ML K + P+  T+
Sbjct: 589 LNPPQDGREF--------------LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTW 634

Query: 408 NSLISCLCRDGMVDEAV 424
             +I  LC+   V   +
Sbjct: 635 ERIIPELCKPKKVQAII 651



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 44/332 (13%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           +S + V + SS E R +         E  +  LI   F+  K +E++   + MV  GC+P
Sbjct: 343 RSVDGVHLLSSLEERGH------HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 396

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           ++V+ + LI    +E K ++A  ++ E++ K   P+ F Y++LI GF K    + A +V 
Sbjct: 397 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 456

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +      P+ + Y+++I  LC  G +  A  ++  +L    +P V+ Y+ +I      
Sbjct: 457 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 516

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G  +  +KL +EM +C++                  QPDV++YN+LLR L          
Sbjct: 517 GSVEVGLKLFNEM-LCQES---------------DSQPDVVTYNILLRALCKQNSISHAI 560

Query: 250 KLMTEMISRGLEPNVVTYSILISSL------CRDG---------------KTEDAVDVLR 288
            L+  M+ RG  P+++T +I +++L       +DG               +   A  ++ 
Sbjct: 561 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIE 620

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
              +K L P+A +++ +I   CK  ++   I+
Sbjct: 621 VMLQKFLPPNASTWERIIPELCKPKKVQAIID 652


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 233/450 (51%), Gaps = 29/450 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    R G   ES   +  ++  G  P++      I+ F Q    N+A+R+++ + 
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG 278

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +   PDV  YN LI G CK  ++  A   L ++ + G+ PD  TYN +I   C  GM+++
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338

Query: 160 AFKVFDQLLRDNC----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           A    DQ+LRD       P   TY  LI     +G  D+A+ + +E              
Sbjct: 339 A----DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNE-------------- 380

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
              ++E +G +P+++  N L++ L   G   +  KLM EM   G  P++ TY+++I+ LC
Sbjct: 381 ---AME-KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G   DA +++  A  KG  PD ++++ LI  YCK  +LD AIE +D M + G  PD++
Sbjct: 437 KIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI 496

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN+IL   CK G  +  +  F+ + + GC PN+ +YN +  +   +     AL +I EM
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEM 556

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLL--VDMESTRFRPTVISYNIIILGFCKTR 453
            +KG+ PD + + +L+   C +G +D A  L   VD E  +F  T+ +YNI+I  F    
Sbjct: 557 QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD-EQYKFSHTIATYNIMINAFAGKL 615

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +N + ++   M E G  P+  TY ++I+G
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDG 645



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 242/493 (49%), Gaps = 22/493 (4%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           AETR N   +   + E  ++  ++   R GK  E++   E M    C+P V     ++  
Sbjct: 64  AETRMN---IDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNI 120

Query: 82  FFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
             + R  ++A +V M + +K   PDV+ +   +  FC+ ++   A ++L+ + S+G    
Sbjct: 121 LVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
            V Y  +IG          A ++F+++L     P ++ +  LI     +G   ++ +LL+
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLN 240

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           ++                 G C++ M+ +A + +  +  RG  PDVI+YN L+  L    
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNF 299

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K  E E  + +M++ G EP+  TY+ +I   C+ G  ++A  +LR    KG  PD  +Y 
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYC 359

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI+  C+DG +D AI   +  +  G  P++V  NT++    + G   QAL++  ++S+ 
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ +YN + + L   G    A  ++ + ++KG  PD  T+N+LI   C+   +D A
Sbjct: 420 GCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA 479

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + ++  M +    P VI+YN I+ G CK  +  + +     M EKGC PN  TY +L E 
Sbjct: 480 IEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTES 539

Query: 484 IGYGGWRAEAMEL 496
                   EA+ L
Sbjct: 540 FCKARKVEEALNL 552



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 219/440 (49%), Gaps = 21/440 (4%)

Query: 46  RSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE- 103
           +SF R  +   +   + +M + GC+   V    +I  F++E    +A  + E +   G  
Sbjct: 154 KSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGIC 213

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD+ A+N LI   C+   ++ + ++L+++  RG SP++ T NI I   C R M+  A ++
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            D + R    P VITY  LI                   G+CK   V +A  ++R + + 
Sbjct: 274 LDGVGR-GLTPDVITYNTLI------------------CGLCKNFKVVEAEHYLRKMVNE 314

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD  +YN ++     +G  +  ++++ +   +G  P+  TY  LI+ LC+DG  + A
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           ++V   A EKGL P+    + L+    + G +  A++ ++ M  +GC PDI  YN ++  
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVING 434

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G    A  +       G  P+V ++NT+            A+ ++  M + G+ PD
Sbjct: 435 LCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITYNS+++ LC+ G  ++ +G    M      P +I+YNI+   FCK R++ E++ ++ 
Sbjct: 495 VITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIE 554

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  P+   +  L++G
Sbjct: 555 EMQNKGLTPDVVNFGTLMKG 574



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 180/377 (47%), Gaps = 20/377 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F   E+ +  LI    + G  D ++      +  G KP++V+C  L+K   Q+    +A
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQA 409

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +++M  + + G  PD++ YN +I+G CK   +  A+ ++    ++G  PDV T+N +I  
Sbjct: 410 LKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDG 469

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C +  +++A ++ D++      P VITY  ++                   G+CK G  
Sbjct: 470 YCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN------------------GLCKAGKY 511

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                  + +  +GC P++I+YN+L  +     K EE   L+ EM ++GL P+VV +  L
Sbjct: 512 EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTL 571

Query: 271 ISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +   C +G  + A  + +   E+   +    +Y+ +I+A+     +++A +  + M  +G
Sbjct: 572 MKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENG 631

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PD   Y  ++  FCK GN +          + G  P+++++  + + L        A+
Sbjct: 632 FSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAV 691

Query: 390 GMISEMLSKGIEPDEIT 406
           G+I  M+ KGI P+ + 
Sbjct: 692 GIIHLMVHKGIVPEVVN 708



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 165/347 (47%), Gaps = 19/347 (5%)

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           +G I+ A  VF+++   NC+P+V +Y  ++   +     D+A K+   M M  KG+V   
Sbjct: 89  KGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY--MRMRDKGIV--- 143

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                        PDV ++ + +++     +     +L+  M S+G E + V Y  +I  
Sbjct: 144 -------------PDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGG 190

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
              +    +A ++       G+ PD  +++ LI   C+ G +  +   L+ ++  G  P+
Sbjct: 191 FYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +   N  +  FC+    ++A+ + + +   G  P+V +YNT+   L  +   + A   + 
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+++G EPD  TYNS+I   C+ GM+  A  +L D     F P   +Y  +I G C+  
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            I+ +I V     EKG KPN      L++G+   G   +A++L N +
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEM 416



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 18/366 (4%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           +  GF   ++TY  MI  L   G  E+  +V  +   +            I   +LEG  
Sbjct: 32  KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMN------------IDNGLLEGVY 79

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
             AM+        +KG + +A      ++   C+P V SYN ++  L+    +++  K+ 
Sbjct: 80  IGAMR-----NYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY 134

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M  +G+ P+V T++I + S CR  +   A  +L     +G    A +Y  +I  + ++
Sbjct: 135 MRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
                A E  + M+  G  PDI+ +N ++   C+ G+  ++  +  K+   G  PN+ + 
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N              A+ ++ + + +G+ PD ITYN+LI  LC++  V EA   L  M +
Sbjct: 255 NIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
             + P   +YN II G+CK   +  + ++L     KG  P+E+TY  LI G+   G    
Sbjct: 314 EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDR 373

Query: 493 AMELAN 498
           A+ + N
Sbjct: 374 AINVFN 379



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 5/214 (2%)

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM---ISDGCLPDIVNYNTILAAFCKN 347
           KE G      +Y  +I      G  +   E L      I +G L  +  Y   +  + + 
Sbjct: 32  KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--YIGAMRNYGRK 89

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A+++FE++    C P+V SYN + + L       +A  +   M  KGI PD  T+
Sbjct: 90  GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
              +   CR      A  LL +M S     + ++Y  +I GF +     E+ E+   M  
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            G  P+   +  LI  +   G   E+  L N ++
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVL 243


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 233/478 (48%), Gaps = 18/478 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+   F+  M   G   D+V    LI  + +E    +A  VM  +   G +P +F YN
Sbjct: 200 KIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYN 259

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A+I+G CK  +   A  V + + S G SPD  TYN ++   C       A  +F  +L  
Sbjct: 260 AVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR 319

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P +I+++ LI  +   G  D+A+    +M                 G C+ GM+ +A
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA 379

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  +GC  DV++YN +L  L       +   L  EM+ RG+ P+  T++ LI  
Sbjct: 380 LEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C++G    A+ +     +K + PD  +Y+ LI  +CK   ++ A E  + MIS    P+
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            ++Y  ++  +C  G   +A  +++++   G  P + + NT+      SGD  +A   + 
Sbjct: 500 HISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLG 559

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+S+G+ PD ITYN+LI+   +   +D+A  L+  ME+   +P V++YN+I+ GFC+  
Sbjct: 560 KMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           R+ E+  +L  M E+G  P+ +TY  LI G        EA    + ++    +  D F
Sbjct: 620 RMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 241/468 (51%), Gaps = 26/468 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           +T  +++I+RS  +      +  +ES+++  + C  D ++   LI+ + Q RK N+    
Sbjct: 83  QTLILRMIRRSGVS-----RVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDT 137

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +IL + G    + A N+L+ G  K   ++LA +V + +   G   +V T NIM+ +LC 
Sbjct: 138 FKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCK 197

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
              I+        + +      ++TY  LI A                   C++G++G+A
Sbjct: 198 DHKIDDVKPFLIDMEQKGIFADIVTYNTLINA------------------YCREGLLGEA 239

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           F+ + S+  +G +P + +YN ++  L   G++   + +  EM+S GL P+  TY+ L+  
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            CR+    +A D+      +G++PD  S+  LI    ++G LD A+ +   M + G +PD
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V Y  ++  +C+NG   +ALEI +K+ + GC  +V +YNT+ + L        A  +  
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+ +G+ PD  T+ +LI   C++G + +A+ L   M     +P +++YNI+I GFCKT 
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            + ++ E+   M  +   PN  +Y +L+ G    G+ +EA  L + ++
Sbjct: 480 EMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 1/185 (0%)

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S  C  D + ++ ++ ++ +    ++  + F+ L   G   ++++ N++   L   G  
Sbjct: 107 MSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWV 166

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  + +E+   GIE +  T N +++ LC+D  +D+    L+DME       +++YN +
Sbjct: 167 DLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I  +C+   + E+ EV+ +M  KG KP   TY  +I G+   G    A  + N ++S+  
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSI-G 285

Query: 506 ISRDT 510
           +S DT
Sbjct: 286 LSPDT 290


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 239/477 (50%), Gaps = 34/477 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFA 108
           G+ +E++  +  M   GC P+ V    L+  F +  + + A RV+ ++ + G  +P++  
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N++++G CKA ++E A KV D +   G +PDVV+YN ++   C  G +  +  VF ++ 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P V+T+T LI AT   G  ++A+ L+ +M                 G CKKG + 
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A   V  +   G QP V+ YN L+     +G+ +   +L+ EM ++ ++P+VVTYS +I
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C+ G  + A  + +   +KG+ PDA +Y  LI   C++ RL+ A E  + M+  G  
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y T++   CK GN ++AL + +++   G  P+V +Y+ + + L  S     A  +
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 392 ISEMLSKGIEPDEITYNSLISC---------------LCRDGMVDEAVGLLVDMESTRFR 436
           + ++  +   PD I Y++L+ C                C  G++ EA  +   M    ++
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
                Y+I+I G C+   + +++     M   G  PN T+ + L+ G+   G   EA
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 221/421 (52%), Gaps = 20/421 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F+ SM+ +G  P+V     L++      +  +AV V+  +   G  P+   YN L++ FC
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 118 KANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           +A +++ A +V+  +R  G + P++VT+N M+  LC  G +E A KVFD+++R+   P V
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           ++Y  L+                   G CK G + ++      +  RG  PDV+++  L+
Sbjct: 259 VSYNTLLS------------------GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                 G  E+   L+ +M  RGL  N VT++ LI   C+ G  +DA+  +   ++ G+ 
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P    Y+ LI+ YCK GR+DLA E +  M +    PD+V Y+TI++ +CK GN D A ++
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +K+   G  P+  +Y+++   L        A  +   ML  G++PDE TY +LI   C+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           +G V++A+ L  +M      P V++Y+++I G  K+ R  E+  +L  ++ +   P+   
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 477 Y 477
           Y
Sbjct: 541 Y 541



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 206/411 (50%), Gaps = 19/411 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V AYNA++     A+ +  A + L  +   G +P+V TYNI++ +LC+RG +E A  V
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMC 205
              +    C P  +TY  L+ A    G+ D A +++  M                  G+C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G +  A +    +   G  PDV+SYN LL     +G   E   + +EM  RGL P+VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ LI + C+ G  E AV ++   +E+GL  +  ++  LI  +CK G LD A+  ++ M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P +V YN ++  +CK G  D A E+  ++      P+V +Y+T+ S     G+ 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +  +ML KG+ PD ITY+SLI  LC +  +++A  L  +M     +P   +Y  +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I G CK   + +++ +   M  KG  P+  TY +LI G+       EA  L
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 183/350 (52%), Gaps = 20/350 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G++P V  YN ++ +L S   + SA +    +LR    P V TY IL++A          
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRA---------- 161

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C +G + +A   V  +   GC P+ ++YN L+      G+ +  E++++ M
Sbjct: 162 --------LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213

Query: 256 ISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
              G  +PN+VT++ +++ LC+ G+ E A  V      +GL PD  SY+ L+S YCK G 
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  ++     M   G +PD+V + +++ A CK GN +QA+ +  ++ + G   N  ++  
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +       G    AL  + EM   GI+P  + YN+LI+  C+ G +D A  L+ +ME+ R
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +P V++Y+ II G+CK   ++ + ++   M +KG  P+  TY  LI G+
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 195/415 (46%), Gaps = 34/415 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI  + +AG  ++++  +  M   G + + V  T LI  F ++   + A+  +E + 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P V  YNALI+G+CK  +++LA +++  + ++   PDVVTY+ +I   C  G ++
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD 415

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF++  ++L+    P  ITY+ LI+                  G+C++  +  A +   
Sbjct: 416 SAFQLNQKMLKKGVLPDAITYSSLIR------------------GLCEEKRLNDACELFE 457

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G QPD  +Y  L+      G  E+   L  EMI +G+ P+VVTYS+LI+ L +  
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPL---------------ISAYCKDGRLDLAIEFLD 323
           +T++A  +L     +   PD   YD L               +  +C  G +  A +   
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+      D   Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+  G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
             + A   I ++L+     D     +LI    ++G VD  + +L  M      P+
Sbjct: 638 MVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 16/208 (7%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  R++ + E   N   L     E  +  LI    + G  +++L   + M+  G  PDVV
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504

Query: 74  MCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL---------------ISGFC 117
             + LI    +  ++ +A R++ ++  +   PD   Y+AL               + GFC
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               ++ A+KV   +  R +  D   Y+I+I   C  G +  A     Q+LR    P   
Sbjct: 565 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 624

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +   L++    EG   +A   + ++  C
Sbjct: 625 STISLVRGLFEEGMVVEADNAIQDLLTC 652


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 246/573 (42%), Gaps = 125/573 (21%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           K DE+  F  SM+ NGC+PDV+  T LI  F +  +     +++    K   PDVF Y +
Sbjct: 22  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTS 81

Query: 112 LISGFCKAN--------------------------------QIELANKVLDRLRSRGFSP 139
           +I G+CKA                                 +I+ A ++ + L++ G SP
Sbjct: 82  VIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSP 141

Query: 140 DVV-----------------------------------TYNIMIGSLCSRGMIESAFKVF 164
           +VV                                   TY ++I  LC   M+  A KVF
Sbjct: 142 NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 201

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           +Q+++  C P  ITYT LI       + D+A KLLD M                 G CK 
Sbjct: 202 EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL 261

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            M+ +A + +  +  RGC+P +  +  LL   L+ G+ EE  +++TEM +RG  P+V+ Y
Sbjct: 262 DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY 321

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI  L   G+  +A  V  +  EKG  PDA +Y  +I  + K G ++ A E L+ M  
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD   YN+++  + K    DQA  +++++   G  PN  ++N +   L+  G   R
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441

Query: 388 ALGMISEMLSK------------------------------------GIEPDEITYNSLI 411
           A  +  EML K                                    GI P+  TY SLI
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             L + G + EA  L+ DM      P V +Y+ +I G   +  ++ + +V   M ++GC 
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           PNE TY +L       G+RA    L    V  H
Sbjct: 562 PNEVTYKVLRR-----GFRAAGRALDLEAVKQH 589



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 212/466 (45%), Gaps = 58/466 (12%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P +V    +I       K ++A +    +   G EPDV A+  LI GFCKA Q ++ 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           +K+L++   R F PDV  Y  +I   C  G +++ +    + +       VI+YT +I+ 
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKG 117

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                + D+A +L +E                  L++ GC P+V++Y  ++  LL  G+ 
Sbjct: 118 LADSKRIDEACELFEE------------------LKTAGCSPNVVAYTAVIDGLLKAGRI 159

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E+G K   EM      P   TY+++I  LC+     DA  V     +KG  PD  +Y  L
Sbjct: 160 EDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 219

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK------------------- 346
           I  + K  ++D A + LD M++ G  P  V Y +I+  FCK                   
Sbjct: 220 IDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC 279

Query: 347 ----------------NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
                            G A++A ++  +++  GC P+V  Y ++   L+S+G    A  
Sbjct: 280 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARH 339

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M+ KG  PD +TY ++I    + G V+ A  +L  M  +   P   +YN ++ G+ 
Sbjct: 340 VFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 399

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K  R++++  V   M   G KPN  T+ +L+ G+   G    A  L
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 445



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 197/416 (47%), Gaps = 26/416 (6%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  +I    +A    ++    E MV  GC PD +  T LI  F +  K ++A +++++
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238

Query: 98  -LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            L K  EP    Y +++ GFCK + I  A +V+ ++R RG  P +  +  ++    S+G 
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
            E A++V  ++    C P VI YT LI      G+  +A  + D M              
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                 K G V  A + +  +   G  PD  +YN L+   + + + ++   +   M++ G
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 418

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLA 318
           ++PN VT+++L+  L +DGKT+ A  + +   EK  + P   SY  LI    K GR+  A
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 MI  G +P+   Y +++ +  K G   +A ++ E +  +G  P+V +Y+ + + 
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           L  S     A  +  EM+ +G  P+E+TY  L     R G    A G  +D+E+ +
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL-----RRGF--RAAGRALDLEAVK 587



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 33/154 (21%)

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +GC P + SYNT+ S L S      A    + M+  G EPD I + +LI   C+ G    
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCK------------------------------- 451
              LL +    RFRP V  Y  +I G+CK                               
Sbjct: 61  GHKLL-NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 452 -TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++RI+E+ E+   +   GC PN   Y  +I+G+
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGL 153



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 32/62 (51%)

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           PT++SYN +I G     +++E+ +   +M + GC+P+   +  LI G    G      +L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 497 AN 498
            N
Sbjct: 65  LN 66


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 233/469 (49%), Gaps = 21/469 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  +++     G  D +L   E MV  GC    V    ++  F +E +   A+  ++
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283

Query: 97  ILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            +       PD + +N L++G CKA  ++ A +++D +   G+ PDV TYN +I  LC  
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G ++ A +V DQ++  +C P  +TY  LI     E Q ++A +L   +            
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A +    + S+GC+PD  +YNML+ +L + GK +E   ++ +M  
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G   +V+TY+ LI   C+  KT +A ++    +  G++ ++ +Y+ LI   CK  R++ 
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A + +D MI +G  PD   YN++L  FC+ G+  +A +I + ++  GC P++ +Y T+ S
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFR 436
            L  +G    A  ++  +  KGI      YN +I  L R     EA+ L  +M E     
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

Query: 437 PTVISYNIIILGFCKTR-RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P  +SY I+  G C     I E+++ L  + EKG  P  ++  +L EG+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 261/514 (50%), Gaps = 25/514 (4%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
            P  +  +R+ + A  +PN     F  +   + +++ R  R+G FD+    +E M ++ C
Sbjct: 60  QPDDSAALRLFNLASKKPN-----FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYG-EPDVFAYNALISGFCKANQIELAN 126
           +        LI+ + Q    ++ + V++ +++++G +PD   YN +++     N ++L  
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 174

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
               ++   G  PDV T+N++I +LC    +  A  + + +      P   T+T ++Q  
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR-GCQPD 228
           + EG  D A+++ ++M                 G CK+G V  A  F++ + ++ G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             ++N L+  L   G  +   ++M  M+  G +P+V TY+ +IS LC+ G+ ++AV+VL 
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +  +P+  +Y+ LIS  CK+ +++ A E    + S G LPD+  +N+++   C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A+E+FE++   GC P+  +YN +  +L S G    AL M+ +M   G     ITYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C+     EA  +  +ME        ++YN +I G CK+RR+ ++ +++  M  +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G KP++ TY  L+     GG   +A ++  A+ S
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 239/474 (50%), Gaps = 20/474 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  LIK   RA +   ++  +E M + G  PD    T +++ + +E   + A+R+ E 
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRG 155
           + ++G      + N ++ GFCK  ++E A   +  + ++ GF PD  T+N ++  LC  G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            ++ A ++ D +L++   P V TY  +I                   G+CK G V +A +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVIS------------------GLCKLGEVKEAVE 351

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  + +R C P+ ++YN L+ TL    + EE  +L   + S+G+ P+V T++ LI  LC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
                  A+++    + KG  PD ++Y+ LI + C  G+LD A+  L  M   GC   ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++  FCK     +A EIF+++   G   N  +YNT+   L  S     A  ++ +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + +G +PD+ TYNSL++  CR G + +A  ++  M S    P +++Y  +I G CK  R+
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
             + ++L ++  KG       Y  +I+G+       EA+ L   ++  +    D
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 238/460 (51%), Gaps = 18/460 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++   + M+ +   P +V  ++      + ++ N  +   + LE  G   +++  N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  +   A  VL ++   G+ PD  T+N +I  L   G +  A  + D+++ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P V+TY  ++      G T  A+ LL +M                  +C+ G +  A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               + +E++G +  V++YN L+R L   GKW +G  L+ +M+SR + PNV+T+++L+  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++GK ++A ++ +    +G++P+  +Y+ L+  YC   RL  A   LD M+ + C PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV + +++  +C     D  +++F  +S  G   N  +Y+ +      SG    A  +  
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S G+ PD +TY  L+  LC +G +++A+ +  D++ ++    ++ Y  II G CK  
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  +  ++  KG KPN  TY ++I G+   G  +EA
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PD      LIK  F E K ++AV +++ ++E   +PDV  YN++++G C++    LA
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L ++  R    DV TY+ +I SLC  G I++A  +F ++     K +V+TY  L++ 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR- 271

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G        ++ + SR   P+VI++N+LL   +  GK 
Sbjct: 272 -----------------GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  +L  EMI+RG+ PN++TY+ L+   C   +  +A ++L        +PD  ++  L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  YC   R+D  ++    +   G + + V Y+ ++  FC++G    A E+F+++   G 
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V +Y  +   L  +G   +AL +  ++    ++   + Y ++I  +C+ G V++A  
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           L   +     +P V++Y ++I G CK   ++E+  +L  M E G  PN+ TY  LI  
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +K +      E++     P +  ++   S   +  Q  L      +L   G + ++ T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           IMI   C       A+ V  ++++   +P   T+  LI+   LEG+  +A+ L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM--- 184

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                             GCQPDV++YN ++  +   G       L+ +M  R ++ +V 
Sbjct: 185 ---------------VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS +I SLCRDG  + A+ + +  + KG+     +Y+ L+   CK G+ +     L  M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S   +P+++ +N +L  F K G   +A E+++++   G  PN+ +YNT+          
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  M+  M+     PD +T+ SLI   C    VD+ + +  ++         ++Y+I+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + GFC++ +I  + E+   M   G  P+  TY +L++G+   G   +A+E+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 19/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-AVRVMEILEKYGEPDVF 107
           R G  D ++   + M   G K  VV    L++   +  K N  A+ + +++ +   P+V 
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+  F K  +++ AN++   + +RG SP+++TYN ++   C +  +  A  + D +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R+ C P ++T+T LI+   +  + D  MK+                   R++  RG   
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF------------------RNISKRGLVA 401

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++Y++L++     GK +  E+L  EM+S G+ P+V+TY IL+  LC +GK E A+++ 
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++  +      Y  +I   CK G+++ A      +   G  P+++ Y  +++  CK 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+  +A  +  K+ + G  PN  +YNT+  A    GD   +  +I EM S G   D  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 408 NSLISCL 414
             +I  L
Sbjct: 582 KMVIDML 588


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 244/493 (49%), Gaps = 33/493 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G   E+L  +  M   GC P+VV    L+  FF+  + + A R++ ++   G
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG 215

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P++  +N++++G CKA ++E A KV D +   G +PD V+YN ++G  C  G    A 
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            VF ++ +    P V+T+T LI      G  + A+ L+ +M                 G 
Sbjct: 276 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CKKG +  A   VR +     +P V+ YN L+     +G+ +E  +L+ EM ++GL+P+V
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 395

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTYS +IS+ C++  T  A ++ +   EKG+ PDA +Y  LI   C++ RL  A      
Sbjct: 396 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKN 455

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI  G  PD   Y +++   CK GN ++AL + +K+   G  P+V +Y+ + + L  S  
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISC---------------LCRDGMVDEAVGLLVD 429
            + A  ++ ++  +   P    Y++L+ C                C  G+++EA  +   
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M    +      Y+++I G C+   + +++     M ++G  PN T+ + LI G+   G 
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635

Query: 490 RAEAMELANALVS 502
             EA ++   L++
Sbjct: 636 VVEADQVIQQLLN 648



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 219/425 (51%), Gaps = 19/425 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F +SM+++G  P+V     LI+         +A+ ++  +   G  P+V  YN L++ F 
Sbjct: 137 FFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 196

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +A +++ A +++  +   G  P++VT+N M+  +C  G +E A KVFD+++R+   P  +
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGV 256

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y  L+                   G CK G   +A      +  +G  PDV+++  L+ 
Sbjct: 257 SYNTLVG------------------GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIH 298

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            +   G  E    L+ +M  RGL+ N VT++ LI   C+ G  +DA+  +R  ++  + P
Sbjct: 299 VMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKP 358

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
               Y+ LI+ YC  GR+D A E L  M + G  PD+V Y+TI++A+CKN +   A E+ 
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 418

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +++ + G  P+  +Y+++   L        A  +   M+  G++PDE TY SLI   C++
Sbjct: 419 QQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 478

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V+ A+ L   M      P V++Y+++I G  K+ R  E+ ++L  ++ +   P  T Y
Sbjct: 479 GNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKY 538

Query: 478 VLLIE 482
             L+ 
Sbjct: 539 DALMH 543



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 207/424 (48%), Gaps = 18/424 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V AYNA++     A+ +  A +  D + S G +P+V TYNI+I +LC RG  + A  +
Sbjct: 114 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +    C P V+TY  L+ A    G+ D A +L+  M                 GMCK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A +    +   G  PD +SYN L+      G   E   +  EM  +G+ P+VVT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ LI  +C+ G  E AV ++R  +E+GL  +  ++  LI  +CK G LD A+  +  M 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                P +V YN ++  +C  G  D+A E+  ++   G  P+V +Y+T+ SA   + D  
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  +ML KG+ PD ITY+SLI  LC +  + +A  L  +M     +P   +Y  +I
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G CK   +  ++ +   M + G  P+  TY +LI G+       EA +L   L     I
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI 532

Query: 507 SRDT 510
             +T
Sbjct: 533 PANT 536



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 177/346 (51%), Gaps = 19/346 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ P V+ YN ++ +L S   + SA + FD +L D   P V TY ILI+A          
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRA---------- 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C +G   +A   +R +   GC P+V++YN L+      G+ +  E+L+  M
Sbjct: 160 --------LCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  GL+PN+VT++ +++ +C+ GK EDA  V      +GL PD  SY+ L+  YCK G  
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+     M   G +PD+V + +++   CK GN + A+ +  ++ + G   N  ++  +
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G    AL  +  M    I+P  + YN+LI+  C  G +DEA  LL +ME+   
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +P V++Y+ II  +CK    + + E+   M EKG  P+  TY  LI
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 196/467 (41%), Gaps = 68/467 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  ++    +AGK +++    + M+  G  PD V    L+  + +   S++A+ V  E+ 
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PDV  + +LI   CKA  +E A  ++ ++R RG   + VT+  +I   C +G ++
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A      + +   KP+V+ Y  LI    + G+ D+A +LL EM                
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              CK      AF+  + +  +G  PD I+Y+ L+R L    +  +   L   MI  GL+
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY+ LI   C++G  E A+ +     + G+ PD  +Y  LI+   K  R   A + 
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 322 L-------------DY-----------------MISDGCLPDIVN--------------- 336
           L              Y                 ++   C+  ++N               
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582

Query: 337 -----YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+ +G  + A  +
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQV 642

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           I ++L+     D     +LI     +G VD  + +L  M      P+
Sbjct: 643 IQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 242/476 (50%), Gaps = 32/476 (6%)

Query: 5   VSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMV 64
           VS  N ++ E  R+  + E  P++           +  ++   F+AG +D  L + E MV
Sbjct: 84  VSYFNSRTEEACRLFEAIEA-PDS---------VTYTAIVDGLFKAGNYDAGLEYYEKMV 133

Query: 65  ANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIE 123
           A+ C+P ++  T L+    +  K  +A  V E ++ K  +PD+ AY++LI G  KA +++
Sbjct: 134 ASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVD 193

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A K++D + +RG  P  V Y  ++  LC  G I+ A K   ++ R   +P V TY+ ++
Sbjct: 194 EARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 253

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
              +  G+ ++A  +++EM                    R C PD ISY M +  L ++G
Sbjct: 254 TGYIGMGKVEEAFAVMEEMA------------------DRDCAPDTISYTMFIEALYSIG 295

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           + EE EK+   M+ +G +P++ TY I+I + C++G    A  VLR   +  + P+ Y Y 
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-- 361
            ++  + K  RL+ A+E    ++ DG LP  V YNT++ A CK    D+ALE+  ++   
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                P++ +Y+ +   L   G + RA  +++EM+  G+ PD  TY SLI  L   G V 
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 475

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            A+ LL +M      P   +Y  ++   C++  ++ + ++L  M   G  PNE T+
Sbjct: 476 RAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTF 530



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 23/420 (5%)

Query: 82  FFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
           +F  R + +A R+ E +E    PD   Y A++ G  KA   +   +  +++ +    P +
Sbjct: 86  YFNSR-TEEACRLFEAIEA---PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTL 141

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           +TY +++  LC    +E A  VF++++R   KP +I Y+ LI      G+ D+A KL+D 
Sbjct: 142 LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK G + +A + ++ +  R  +P V +Y+ ++   + MGK
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            EE   +M EM  R   P+ ++Y++ I +L   G+ E+A  V     EKG  PD ++Y  
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 321

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I  +CK+G +  A   L  M      P+   Y  I+  F K+   ++ALE+++++   G
Sbjct: 322 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 381

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGMVDE 422
             P+  +YNT+ +AL        AL ++ EM  +   +EP  +TY+ +I  L + GM + 
Sbjct: 382 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 441

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  LL +M      P   +Y  +I       +++ ++E+L  M + G  P++ TY  L++
Sbjct: 442 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ 501



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 196/401 (48%), Gaps = 25/401 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP+V ++N L+ GF   +  E+ N +L  +++RG + +  T+ +++ +LC+R  ++ A  
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 163 VFDQLLRDNCK-------PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            F+    + C+       P  +TYT ++                   G+ K G      +
Sbjct: 86  YFNSRTEEACRLFEAIEAPDSVTYTAIVD------------------GLFKAGNYDAGLE 127

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           +   + +  C+P +++Y +L+  L    K E    +  EMI +G +P+++ YS LI  L 
Sbjct: 128 YYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLS 187

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G+ ++A  ++     +G  P A +Y  +++  CK GR+  A++ +  M      P + 
Sbjct: 188 KAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 247

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+ I+  +   G  ++A  + E+++D  C P+  SY     AL+S G +  A  +   M
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 307

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + KG +PD  TY  +I   C++G +  A  +L  M+    +P    Y +I+ GF K+ R+
Sbjct: 308 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 367

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E++E+   + + G  P+  TY  +I  +       EA+EL
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 408



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 157/307 (51%), Gaps = 10/307 (3%)

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + + + G +  A  F +S  S   +P+V S+N+LLR       +E    L+ EM +RG+ 
Sbjct: 5   LALVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKARGIT 61

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL-------TPDAYSYDPLISAYCKDGR 314
            N  T+ +++S+LC     + AV    +  E+          PD+ +Y  ++    K G 
Sbjct: 62  SNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGN 121

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D  +E+ + M++  C P ++ Y  ++   CK    ++A ++FE++   G  P++ +Y++
Sbjct: 122 YDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSS 181

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  +G    A  ++  M+++G  P  + Y S+++ LC+ G + EAV  + +M   R
Sbjct: 182 LIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 241

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            RP V +Y+ I+ G+    ++ E+  V+  M ++ C P+  +Y + IE +   G R EA 
Sbjct: 242 LRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 301

Query: 495 ELANALV 501
           ++   +V
Sbjct: 302 KVFETMV 308


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 239/477 (50%), Gaps = 34/477 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFA 108
           G+ +E++  +  M   GC P+ V    L+  F +  + + A RV+ ++ + G  +P++  
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N++++G CKA ++E A KV D +   G +PDVV+YN ++   C  G +  +  VF ++ 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P V+T+T LI AT   G  ++A+ L+ +M                 G CKKG + 
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A   V  +   G QP V+ YN L+     +G+ +   +L+ EM ++ ++P+VVTYS +I
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C+ G  + A  + +   +KG+ PDA +Y  LI   C++ RL+ A E  + M+  G  
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y T++   CK GN ++AL + +++   G  P+V +Y+ + + L  S     A  +
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 392 ISEMLSKGIEPDEITYNSLISC---------------LCRDGMVDEAVGLLVDMESTRFR 436
           + ++  +   PD I Y++L+ C                C  G++ EA  +   M    ++
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
                Y+I+I G C+   + +++     M   G  PN T+ + L+ G+   G   EA
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 221/421 (52%), Gaps = 20/421 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F+ SM+ +G  P+V     L++      +  +AV V+  +   G  P+   YN L++ FC
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 118 KANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           +A +++ A +V+  +R  G + P++VT+N M+  LC  G +E A KVFD+++R+   P V
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           ++Y  L+                   G CK G + ++      +  RG  PDV+++  L+
Sbjct: 259 VSYNTLLS------------------GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                 G  E+   L+ +M  RGL  N VT++ LI   C+ G  +DA+  +   ++ G+ 
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P    Y+ LI+ YCK GR+DLA E +  M +    PD+V Y+TI++ +CK GN D A ++
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +K+   G  P+  +Y+++   L        A  +   ML  G++PDE TY +LI   C+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           +G V++A+ L  +M      P V++Y+++I G  K+ R  E+  +L  ++ +   P+   
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 477 Y 477
           Y
Sbjct: 541 Y 541



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 206/411 (50%), Gaps = 19/411 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V AYNA++     A+ +  A + L  +   G +P+V TYNI++ +LC+RG +E A  V
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMC 205
              +    C P  +TY  L+ A    G+ D A +++  M                  G+C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G +  A +    +   G  PDV+SYN LL     +G   E   + +EM  RGL P+VV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ LI + C+ G  E AV ++   +E+GL  +  ++  LI  +CK G LD A+  ++ M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P +V YN ++  +CK G  D A E+  ++      P+V +Y+T+ S     G+ 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +  +ML KG+ PD ITY+SLI  LC +  +++A  L  +M     +P   +Y  +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I G CK   + +++ +   M  KG  P+  TY +LI G+       EA  L
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 183/350 (52%), Gaps = 20/350 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G++P V  YN ++ +L S   + SA +    +LR    P V TY IL++A          
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRA---------- 161

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C +G + +A   V  +   GC P+ ++YN L+      G+ +  E++++ M
Sbjct: 162 --------LCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213

Query: 256 ISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
              G  +PN+VT++ +++ LC+ G+ E A  V      +GL PD  SY+ L+S YCK G 
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  ++     M   G +PD+V + +++ A CK GN +QA+ +  ++ + G   N  ++  
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +       G    AL  + EM   GI+P  + YN+LI+  C+ G +D A  L+ +ME+ R
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +P V++Y+ II G+CK   ++ + ++   M +KG  P+  TY  LI G+
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 202/424 (47%), Gaps = 38/424 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI  + +AG  ++++  +  M   G + + V  T LI  F ++   + A+  +E + 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P V  YNALI+G+CK  +++LA +++  + ++   PDVVTY+ +I   C  G ++
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD 415

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF++  ++L+    P  ITY+ LI+                  G+C++  +  A +   
Sbjct: 416 SAFQLNQKMLKKGVLPDAITYSSLIR------------------GLCEEKRLNDACELFE 457

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G QPD  +Y  L+      G  E+   L  EMI +G+ P+VVTYS+LI+ L +  
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPL---------------ISAYCKDGRLDLAIEFLD 323
           +T++A  +L     +   PD   YD L               +  +C  G +  A +   
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+      D   Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+  G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM-VDEAVGLLVDMESTRFRPTVISY 442
             + A   I ++L+     D     +LI    ++GM   +A G +   ES+   P+V  +
Sbjct: 638 MVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGMDYFQAQGEIWYSESS---PSVEYW 694

Query: 443 NIII 446
           N ++
Sbjct: 695 NYMM 698



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 36/265 (13%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  R++ + E   N   L     E  +  LI    + G  +++L   + M+  G  PDVV
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504

Query: 74  MCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL---------------ISGFC 117
             + LI    +  ++ +A R++ ++  +   PD   Y+AL               + GFC
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               ++ A+KV   +  R +  D   Y+I+I   C  G +  A     Q+LR    P   
Sbjct: 565 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 624

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMVGQAFQFVRSL 220
           +   L++    EG   +A   + ++  C                 K+GM    FQ    +
Sbjct: 625 STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGM--DYFQAQGEI 682

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKW 245
                 P V  +N ++ T+ + G W
Sbjct: 683 WYSESSPSVEYWNYMM-TICHFGVW 706


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 212/418 (50%), Gaps = 19/418 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GK   +   I+ M      P    C  LI+   +   + +A RV++I+   G  PD+  Y
Sbjct: 144 GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 203

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G CK   ++ A ++LD +   G  PD +TYN ++  +   G  + A   +   LR
Sbjct: 204 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLR 263

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C   +ITYT+LI+       T +AM++L++M +                   GC PD+
Sbjct: 264 KGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAI------------------EGCYPDI 305

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+      GK+E+   ++  ++S G+ PN VTY+ L+ SLC  G  ++  ++L  
Sbjct: 306 VTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLI 365

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                  P   +Y+ LI+  CK G LD AI F D M+S  CLPDI+ YNT+LAA CK G 
Sbjct: 366 MNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGM 425

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+AL +   L+D  C P + +YN +   L   G   +A+ +  EM+ +G  PD+IT+ +
Sbjct: 426 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 485

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           L   L R  +V++A+ +L +M     R    ++  +I G C    I E+ ++   + E
Sbjct: 486 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTE 543



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 210/396 (53%), Gaps = 23/396 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N ++ +LCS+G + +A ++ D + R N  P   +   LI+  +    T++A ++L
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M                 G+CKKG++  A + +  +   GC PD I+YN +LR + + 
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G +++      + + +G    ++TY++LI  +C+   T  A++VL     +G  PD  +Y
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L++  CK G+ +     +  ++S G  P+ V YNT+L + C +G  D+  EI   ++ 
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
              PP V +YN + + L   G   RA+    +M+S    PD ITYN+L++ LC++GMVDE
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +  TR  P +I+YNI+I G  K   + +++E+   M E+G  P++ T+  L  
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFW 488

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           G+    +R + +E  +ALV +  +++   +  N  F
Sbjct: 489 GL----FRLDLVE--DALVILKEMNKRNQRIKNSAF 518



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 18/297 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++  F  G FD+++ F +  +  GC   ++  T LI+   +   + +A+ V+E + 
Sbjct: 238 YNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMA 297

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN+L++  CK  + E    ++  L S G  P+ VTYN ++ SLC+ G  +
Sbjct: 298 IEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWD 357

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++   +   +  PTV+TY ILI      G  D+A+   D+M                
Sbjct: 358 EVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 417

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+GMV +A   + SL    C P +I+YN+++  L   G  E+  +L  EMI RG  
Sbjct: 418 AALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFA 477

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           P+ +T+  L   L R    EDA+ +L+   ++       ++  +I   C  G ++ A
Sbjct: 478 PDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEA 534



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 19/179 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI    + G  D ++ F + MV++ C PD++    L+    +E   ++A+ ++  L +  
Sbjct: 381 LINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTR 440

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P +  YN +I G  K   +E A ++   +  RGF+PD +T+  +   L    ++E A 
Sbjct: 441 CSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDAL 500

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            +  ++ + N +     +  +I                   G+C  GM+ +A Q  + L
Sbjct: 501 VILKEMNKRNQRIKNSAFRFVIH------------------GLCAAGMIEEANQLHQKL 541


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 226/461 (49%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+     P ++   K++  F + +  + AV +   LE  G +PD+   N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI     VL ++  RG+ PD VT N +I  LC +G ++ A    D+LL    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +   ++Y  LI      G T  A+K L ++                  MCK  +V +A+ 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +  +G   DV++YN L+     +GK +E   L+ EM+ + + PNV TY+IL+ +LC
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++GK ++A  VL    +  + PD  +Y  L+  Y     +  A    + M   G  PD+ 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  ++  FCKN   D+AL +F+++      P + +Y+++   L  SG       +I EM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G   D ITY+SLI  LC++G +D A+ L   M+    RP + ++ I++ G CK  R+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++ EV   +  KG   N  TY ++I G    G   EA+ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 213/428 (49%), Gaps = 19/428 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     G+  ++L+F + ++A G + + V    LI    +   +  A++ +  ++ + 
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRL 194

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  YN +I   CK   +  A  +   +  +G S DVVTYN +I   C  G ++ A 
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + ++++     P V TY IL+ A                  +CK+G V +A   +  + 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDA------------------LCKEGKVKEAKSVLAVML 296

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
               +PDVI+Y+ L+     + + ++ + +   M   G+ P+V TY+ILI+  C++   +
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+++ +   +K + P   +Y  LI   CK GR+    + +D M   G   D++ Y++++
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CKNG+ D+A+ +F K+ D    PN+ ++  +   L   G    A  +  ++L+KG  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +  TYN +I+  C+ G+++EA+ +L  ME     P   ++  II+   K    +++ ++
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536

Query: 462 LAAMFEKG 469
           L  M  +G
Sbjct: 537 LRQMIARG 544



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    + G    ++ F+  +     KPDVVM   +I    + +  ++A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E+  K    DV  YN LI GFC   +++ A  +L+ +  +  +P+V TYNI++ +L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  V   +L+   KP VITY+ L+    L  +  KA  + + M         
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK  MV +A    + +  +   P +++Y+ L+  L   G+      L+ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG   +V+TYS LI  LC++G  + A+ +    K++ + P+ +++  L+   CK GR
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A E    +++ G   ++  YN ++   CK G  ++AL +  K+ D GC PN  ++ T
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  AL+   +  +A  ++ +M+++G+
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 151/300 (50%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            GK  E++  +  MV     P+V     L+    +E K  +A  V+ ++ K   +PDV  
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+ G+    +++ A  V + +   G +PDV TY I+I   C   M++ A  +F ++ 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           + N  P ++TY+ LI      G+      L+DEM                 G+CK G + 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ +  +P++ ++ +LL  L   G+ ++ +++  +++++G   NV TY+++I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G  E+A+ +L   ++ G  P+A++++ +I A  K    D A + L  MI+ G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ ++ K      A+     +   G  PD++  N ++  FC  G       
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+   G PP+  + NT+   L   G   +AL    ++L++G + ++++Y +LI+ +C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    A+  L  ++    +P V+ YN II   CK + ++E+  + + M  KG   +  
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G    G   EA+ L N +V
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMV 261



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N D A+  F ++  +   P +  +N +  +         A+ +   +  KGI+PD IT N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+C C  G +     +L  +    + P  ++ N +I G C   ++ +++     +  +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 469 GCKPNETTYVLLIEGI 484
           G + N+ +Y  LI G+
Sbjct: 159 GFQLNQVSYATLINGV 174


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 233/461 (50%), Gaps = 9/461 (1%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGKFD++   I  M++ G  PD    +K+I       K  KA  + E ++K G  P V+ 
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI  FCKA  I+ A    D +     +P+VVTY  +I +      +  A K+F+ +L
Sbjct: 491 YTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML 550

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESRGCQ- 226
            +  KP V+TYT LI      GQ DKA ++   M G  +   +   F+    L+   C+ 
Sbjct: 551 LEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFK----LDDNDCET 606

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++I+Y  L+  L    + EE  +L+  M   G EPN + Y  LI   C+ GK E+A +V
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                E+G  P+ Y+Y  LI++  K+ RLDL ++ L  M+ + C P++V Y  ++   CK
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  ++A  +  K+ +VGC PNV +Y  M       G   + L +  +M SKG  P+ IT
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y  LI+  C  G++DEA  LL +M+ T +   + SY  II GF   R    SI +L  + 
Sbjct: 787 YRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELS 844

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           E    P E+ Y +LI+     G    A+ L   + S  +++
Sbjct: 845 ENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLA 885



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 228/535 (42%), Gaps = 57/535 (10%)

Query: 7   CINPKSNERVRVSSSAETRPNTH-----LLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           C N  +N+RV      + R +       LL+F         LI++  R G ++ +L  + 
Sbjct: 144 CCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF---------LIQKCCRNGMWNVALEELG 194

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            +   G K        LI+ F +  K + A  V   +   G   D           CKA 
Sbjct: 195 RLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAG 254

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +       L  L    F PD V YN M+  LC   + + A  + D++   +C P V+TY 
Sbjct: 255 R---CGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYR 311

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
           IL+   + +GQ  +  ++L  M                   CK      A++  + +   
Sbjct: 312 ILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKC 371

Query: 224 GCQPDVISYNMLLRTLLNMGKW------EEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           GCQP  + YN+ + ++ +  +       E  EK  +EM+  G+  N V  S     LC  
Sbjct: 372 GCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGA 431

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK + A +++     KG  PD  +Y  +I   C   +++ A    + M  +G +P +  Y
Sbjct: 432 GKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             ++ +FCK G   QA   F+++    C PNV +Y ++  A   +     A  +   ML 
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLL 551

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLV----DMESTRF------------RPTVIS 441
           +G +P+ +TY +LI   C+ G +D+A  +      D+ES+               P +I+
Sbjct: 552 EGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIIT 611

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           Y  ++ G CK  R+ E+ E+L  M   GC+PN+  Y  LI+G    G    A E+
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 212/462 (45%), Gaps = 52/462 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +A K  ++    E M+  G KP+VV  T LI    +  + +KA ++   ++
Sbjct: 526 YTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585

Query: 100 KYGE-----------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
              E                 P++  Y AL+ G CKAN++E A+++LD +   G  P+ +
Sbjct: 586 GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQI 645

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I   C  G +E+A +VF ++      P + TY+ LI +   E + D  +K+L +M
Sbjct: 646 VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G   +A++ +  +E  GC P+VI+Y  ++     +GK 
Sbjct: 706 LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKI 765

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E+  +L  +M S+G  PN +TY +LI+  C  G  ++A  +L   K+        SY  +
Sbjct: 766 EQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKI 825

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG- 364
           I  + ++     +I  LD +  +  +P    Y  ++  F K G  + AL + E++S    
Sbjct: 826 IEGFNRE--FITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPS 883

Query: 365 -CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
               N   Y ++  +L  +    +A  + + M++K + P+  T+  LI  L R G   EA
Sbjct: 884 LAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943

Query: 424 VGL--------------LVDMESTRFRPTVISYNIIILGFCK 451
           + L               V+ ++TR  P  I + +I  GF K
Sbjct: 944 LQLSDSICQMVCHVCSNFVNYKTTRALPLCIKHFLISTGFMK 985



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 159/411 (38%), Gaps = 63/411 (15%)

Query: 133 RSRGFSPDVVTYNIMIGSLCS-------------------------------------RG 155
           R  G+S   V YN +I  LC                                       G
Sbjct: 125 RQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNG 184

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
           M   A +   +L     K +  TY  LIQ  +   + D A  +  EM             
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +CK G  G A      LE     PD + YN ++  L     ++E   ++  M S 
Sbjct: 245 CFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              PNVVTY IL+S     G+      +L     +G  P+   ++ L+ AYCK      A
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGN--ADQALEIFEK----LSDVGCPPNVSSY 372
            +    MI  GC P  + YN  + + C N        LE+ EK    + D+G   N  + 
Sbjct: 362 YKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV 421

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +     L  +G   +A  +I EM+SKG  PD+ TY+ +I  LC    V++A  L  +M+ 
Sbjct: 422 SNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK 481

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
               P+V +Y I+I  FCK   I ++      M    C PN  TY  LI  
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 246/486 (50%), Gaps = 35/486 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   E+L  +  M   GC P+ V    L+  F +  + ++A R+++++ + G +P++  +
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N++++G CKA ++E A KV D +   G +PD V+YN ++G  C  G    A  VF ++ R
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+T+T LI      G  ++A+ L+ EM                 G CKKG +  
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   VR +     QP V+ YN L+     +G+ +E  +L+ EM ++G++P+VVTYS ++S
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           + C++G T  A  + +   E G+ PDA +Y  LI   C++ RL  A      MIS G  P
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D V Y +++   CK GN ++AL + +++   G  P+V +Y+ + + L  S     A  ++
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-------ESTRFRPTVIS---- 441
            ++  +   P  I Y++L+ C CR+  +   + LL          E+ +   +++     
Sbjct: 531 FKLYHEEPVPANIKYDALMRC-CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589

Query: 442 -----YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                Y+++I G C+   + +++     M + G  PN T+ + LI G+   G   EA ++
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649

Query: 497 ANALVS 502
              L++
Sbjct: 650 IQQLLN 655



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 222/420 (52%), Gaps = 19/420 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F +SM+++G  P+V     L++         +A+ V+  +   G +P+   YN L++ FC
Sbjct: 144 FFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +A +++ A +++D +R  G  P++VT+N ++  +C  G +E A KVFD+++++   P  +
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y  L+                   G CK G   +A      +  +G  PDV+++  L+ 
Sbjct: 264 SYNTLVG------------------GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIH 305

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            +   G  E    L+ EM  RGL+ N +T++ LI   C+ G  +DA+  +R  ++  + P
Sbjct: 306 VMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP 365

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
               Y+ LI+ YC  GR+D A E +  M + G  PD+V Y+TIL+A+CKNG+   A ++ 
Sbjct: 366 SVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN 425

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +++ + G  P+  +Y+++   L        A  +   M+S G++PDE+TY SLI   C++
Sbjct: 426 QQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKE 485

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V+ A+ L  +M      P V++Y+++I G  K+ R  E+  +L  ++ +   P    Y
Sbjct: 486 GNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKY 545



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 206/410 (50%), Gaps = 18/410 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V AYNA++     A+ +  A +  D + S G +P+V TYNI++ +LC RG  + A  V
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +    C P  +TY  L+ A    G+ D+A +L+D M                 G+CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A +    +   G  PD +SYN L+     +G   E   +  EM  +G+ P+VVT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ LI  +C+ G  E AV ++R  +E+GL  +  ++  LI  +CK G LD A+  +  M 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                P +V YN ++  +C  G  D+A E+  ++   G  P+V +Y+T+ SA   +GD  
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  +ML  G+ PD ITY+SLI  LC +  + +A  L  +M S   +P  ++Y  +I
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G CK   +  ++ +   M + G  P+  TY +LI G+       EA  L
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 163/308 (52%), Gaps = 36/308 (11%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P V++YN +L  L +        +    M+S G+ PNV TY+IL+ +LC  G  ++A
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAY---------------------------------- 309
           + VLR  +  G  P+A +Y+ L++A+                                  
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 310 -CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            CK GR++ A +  D M+ +G  PD V+YNT++  +CK G + +AL +F +++  G  P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V ++ ++   +  +G+  RA+G++ EM  +G++ +EIT+ +LI   C+ G +D+A+  + 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M   R +P+V+ YN +I G+C   R++E+ E++  M  KG KP+  TY  ++      G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 489 WRAEAMEL 496
               A +L
Sbjct: 417 DTHSAFQL 424



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 34/415 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LI    +AG  + ++  +  M   G + + +  T LI  F ++   + A+  V E+ 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +   +P V  YNALI+G+C   +++ A +++  + ++G  PDVVTY+ ++ + C  G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF++  Q+L +   P  ITY+ LI+                   +C++  +G A    +
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRV------------------LCEEKRLGDAHVLFK 461

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++ S G QPD ++Y  L+      G  E    L  EM+  G+ P+VVTYS+LI+ L +  
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPL---------------ISAYCKDGRLDLAIEFLD 323
           +T++A  +L     +   P    YD L               +  +C  G ++ A +   
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQ 581

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            ++      D   Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+  G
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKG 641

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
             + A  +I ++L+     D     +LI    ++G VD  + +L  M      P+
Sbjct: 642 MVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 250/477 (52%), Gaps = 36/477 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANG------CKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           L+K   + G  + +L   + M+ +       CKP ++  + +I    ++R+ ++A  + E
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G  PDV +Y  LI GFC + + E A  + + +   G  PDV T +++I  LC +G
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A K+ + +++  C   V+T T L++   ++ +  KA +L  +M             
Sbjct: 543 KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602

Query: 203 ----GMCKKGMVGQAFQFVRSLESR------GCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
               G+C+ G +  A +  +++ S        C+P+ ISY++++  L   G+ +E  +L 
Sbjct: 603 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 662

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM + G+ P+V++Y+ LI   CR GK +DA  +     + G+ PD  ++  LI   CK+
Sbjct: 663 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKE 722

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G++  A E L+ MI  GC+P+ V Y T++   C N    +A ++F K+  +GC P+V +Y
Sbjct: 723 GKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTY 782

Query: 373 NTMFSALWSSGDKIRALGMISEMLS------KGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            T+   L  +G+   AL +  +MLS         +PD I+Y+ +I  LC+ G  DEA  L
Sbjct: 783 GTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 842

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +M++    P VISY  +I GFC++ ++ ++  +   M ++G + N  TY ++I G
Sbjct: 843 FKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 899



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 225/445 (50%), Gaps = 36/445 (8%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           DE+    E M A G  PDV+  T LI  F    K  KA  +  E+L+   +PDV   + L
Sbjct: 475 DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 534

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I   CK  ++  ANK+L+ +  RG   DVVT   ++  LC +  I  A ++F ++ +  C
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------------GMCKKGM 209
            P V+T   L++     G    A++L   M                       G+CK G 
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +A +  + +++ G  PDVISY  L+      GKW++ + L  EM+  G++P+V T+S+
Sbjct: 655 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 714

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  LC++GK  +A ++L    ++G  P+  +Y  L+   C + R+  A +    M   G
Sbjct: 715 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 774

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVG-----CPPNVSSYNTMFSALWSSG 383
           CLPD+V Y T++   C+ GN   ALE+ +K LSD G       P+V SY+ +   L   G
Sbjct: 775 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
            +  A  +  EM + G+ P+ I+Y SLI   CR G +++A  L  +M     +   ++Y+
Sbjct: 835 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 894

Query: 444 IIILGFCKTRRINESIEVLAAMFEK 468
           ++I GFCK  +I++      A+F+K
Sbjct: 895 VMIHGFCKEGQIDK------ALFQK 913



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 243/498 (48%), Gaps = 36/498 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           +  LIK      +  E+ +   SM   GC+PD +    L+K   Q    N A+++  E+L
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444

Query: 99  E---KYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               +YG   +P + +Y+ +I G CK  + + A ++ + ++++G  PDV++Y  +I   C
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E A  +F+++L    +P V T ++LI     +G+  +A KLL+ +          
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C K  + +A Q    ++  GC P+V++   L++ L   G  +   +L   M
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624

Query: 256 ISR------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +S         +PN ++YSI+I  LC+ G+ ++A ++ +  K  G+ PD  SY  LI  +
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G+   A    + M+  G  PD+  ++ ++   CK G   +A E+ E +   GC PN 
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y T+   L  +     A  +  +M   G  PD +TY +L+  LC+ G +  A+ L   
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804

Query: 430 MES------TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           M S      T F+P VISY+III G CK  R +E+ E+   M   G  PN  +Y  LI G
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 864

Query: 484 IGYGGWRAEAMELANALV 501
               G   +A  L N +V
Sbjct: 865 FCRSGKLEDAKHLFNEMV 882



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 246/535 (45%), Gaps = 72/535 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  LIK      +  E+     SM   GC+PD +    L+K   Q  K N A+ + + + 
Sbjct: 273 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332

Query: 99  ---EKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
               +YG     PDV   + LI   CK  ++  AN++L+ +  RG   D+VTY+ +I  L
Sbjct: 333 NDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 392

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C    I  A  +F  + +  C+P  ITY  L++     G  + A++L  EM         
Sbjct: 393 CMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGI 452

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK     +A +    ++++G  PDVISY  L+      GKWE+ 
Sbjct: 453 KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 512

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT------------ 296
           + L  EM+  G++P+V T S+LI  LC+ GK  +A  +L    ++G              
Sbjct: 513 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG 572

Query: 297 -----------------------PDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----- 328
                                  P+  +   L+   C+ G + +A+E    M+SD     
Sbjct: 573 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 632

Query: 329 -GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C P+ ++Y+ I+   CK G  D+A E+F+++  +G  P+V SY ++      SG    
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 692

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  + +EM+  G++PD  T++ LI  LC++G V EA  LL  M      P  ++Y  ++ 
Sbjct: 693 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 752

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G C   RI+E+ ++   M + GC P+  TY  L++G+   G    A+EL   ++S
Sbjct: 753 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 807



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 231/456 (50%), Gaps = 18/456 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           DE+    + M A G  PDV+  T LI  F    K  KA  +  E+L+   +PDV     L
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I  FCK  ++  AN++L+ +  RG   D+VTY+ +I  LC +  I  A ++F  + +  C
Sbjct: 242 IDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +P  I Y  L++     G+ + A+ L  E       M+    Q+      +  +PDV + 
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQE-------MLNDTSQY----GIKCIRPDVTTS 350

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           +ML+  L   GK  E  +L+  MI RG   ++VTYS LI  LC + +  +A  +  + ++
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG------CLPDIVNYNTILAAFCK 346
            G  PDA +Y  L+   C+ G +++A++    M++D       C P +++Y+ I+   CK
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +   D+A E+FE++   G  P+V SY T+      SG   +A  + +EML  GI+PD  T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            + LI  LC+ G V EA  LL  +        V++   ++ G C   RI+++ ++   M 
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + GC PN  T   L++G+   G    A+EL   ++S
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 244/494 (49%), Gaps = 36/494 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+   +E M+  GC  D+V  + LIK    E + ++A  +   ++K G  PD  
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418

Query: 108 AYNALISGFCKANQIELA----NKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAF 161
            Y  L+ G C+   I +A     ++L+     G    P +++Y+I+I  LC     + A 
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F+++      P VI+YT LI    L G+ +KA  L +EM                  +
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CKKG V +A + +  +  RGC  DV++   L++ L    +  +  +L  +M   G  PNV
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 598

Query: 265 VTYSILISSLCRDGKTEDAVDV----LRAAKEKGLT--PDAYSYDPLISAYCKDGRLDLA 318
           VT + L+  LC+ G  + A+++    L      G+   P+A SY  +I   CK GR D A
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 658

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E    M + G +PD+++Y +++  FC++G    A  +F ++ D+G  P+V++++ +   
Sbjct: 659 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 718

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G  I A  ++  M+ +G  P+ +TY +L+  LC +  + EA  L + M+     P 
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778

Query: 439 VISYNIIILGFCKTRRINESIEVLAAM------FEKGCKPNETTYVLLIEGIGYGGWRAE 492
           V++Y  ++ G C+T  I  ++E+   M      +    KP+  +Y ++I+G+   G   E
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838

Query: 493 AMELANALVSMHAI 506
           A EL   + ++  I
Sbjct: 839 ARELFKEMKALGVI 852



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 259/529 (48%), Gaps = 38/529 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+   +E MV  GC  D+V  + LIK    + + ++A ++   ++K G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 103 -EPDVFAYNALISGFCKANQIELA----NKVLDRLRSRGFS---PDVVTYNIMIGSLCSR 154
             PD  AY  L+ G C+  +I +A     ++L+     G     PDV T +++I  LC  
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +  A ++ + +++  C   ++TY+ LI+   +E +  +A  L   M            
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 203 -----GMCKKGMVGQAFQFVRS-LESRG-----CQPDVISYNMLLRTLLNMGKWEEGEKL 251
                G+C+ G +  A Q  +  L   G     C+P +ISY++++  L    + +E  +L
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM ++G+ P+V++Y+ LI   C  GK E A  +     + G+ PD  +   LI   CK
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            G++  A + L+ +I  GC+ D+V   T++   C      +A ++F K+  +GC PNV +
Sbjct: 541 KGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 600

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSK----GI--EPDEITYNSLISCLCRDGMVDEAVG 425
             T+   L  SG+   AL +   MLS     GI  +P+ I+Y+ +I  LC+ G  DEA  
Sbjct: 601 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 660

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L  +M++    P VISY  +I GFC++ +  ++  +   M + G +P+ TT+ +LI+ + 
Sbjct: 661 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 720

Query: 486 YGGWRAEAMELANALVSMHAISRD-TFKRLNRTFPLLDVYKEISHLATK 533
             G   EA EL   ++    I    T+  L +   + D   E + L  K
Sbjct: 721 KEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 217/438 (49%), Gaps = 39/438 (8%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI---------MIGSLCSR 154
           PD F +N LI+  C   ++      +  +  RG+ PD+VTY+I         +I  LC  
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +  A ++ + +++  C   ++TY+ LI+   +E +  +A  L   M            
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 203 -----GMCKKGMVGQAFQFVRS-LESRG-----CQPDVISYNMLLRTLLNMGKWEEGEKL 251
                G+C+ G +  A Q  +  L   G     C+P +ISY++++  L    + +E  +L
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM ++G+ P+V++Y+ LI   C  GK E A  +     + G+ PD  +   LI  +CK
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           +G++  A E L+ M+  GC+ DIV Y+T++   C      +A ++F  +  +GC P+  +
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 372 YNTMFSALWSSGDKIRALGMISEMLS-------KGIEPDEITYNSLISCLCRDGMVDEAV 424
           Y T+   L  +G    AL +  EML+       K I PD  T + LI  LC++G V EA 
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL  M        +++Y+ +I G C   RI+E+  +  +M + GC+P+  TY  L++G+
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427

Query: 485 GYGGWRAEAMELANALVS 502
              G    A++L   +++
Sbjct: 428 CQTGNINIALQLHQEMLN 445



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 67/383 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+   +E ++  GC  DVV CT L+K    + + +KA ++   ++K G
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593

Query: 103 ------------------------------------------EPDVFAYNALISGFCKAN 120
                                                     +P+  +Y+ +I G CK  
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + + A ++   +++ G  PDV++Y  +I   C  G  + A  +F++++    +P V T++
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
           +LI     EG+  +A +LL+ M                 G+C    + +A Q    ++  
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS------RGLEPNVVTYSILISSLCRD 277
           GC PDV++Y  L++ L   G  +   +L  +M+S         +P+V++YSI+I  LC+ 
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A ++ +  K  G+ P+  SY  LI  +C+ G+L+ A    + M+  G   + V Y
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 338 NTILAAFCKNGNADQALEIFEKL 360
           + ++  FCK G  D+AL  F+K+
Sbjct: 894 SVMIHGFCKEGQIDKAL--FQKM 914



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 145/288 (50%), Gaps = 15/288 (5%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI---------LISSL 274
           G  PD  ++N+L+  L N+ +  EG   M  ++ RG  P++VTYSI         LI  L
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++GK  +A ++L    ++G   D  +Y  LI   C + R+  A      M   GC PD 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 335 VNYNTILAAFCKNGNADQALEIF-EKLSDVG-----CPPNVSSYNTMFSALWSSGDKIRA 388
           + Y T++   C+ GN + AL++  E L+D G     C P + SY+ +   L     +  A
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM ++G+ PD I+Y SLI   C  G  ++A  L  +M     +P V +  ++I  
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           FCK  ++ E+ E+L  M  +GC  +  TY  LI+G+      +EA +L
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 15/223 (6%)

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT---------ILAAF 344
           GL PD+++++ LI+  C   R++  +  +  ++  G +PDIV Y+          ++   
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G   +A E+ E +   GC  ++ +Y+T+   L        A  +   M   G  PD 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDM--ESTRF----RPTVISYNIIILGFCKTRRINES 458
           ITY +L+  LC+ G ++ A+ L  +M  ++ R+    +PT+ISY+III G CK RR +E+
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E+   M  +G  P+  +Y  LI G  + G   +A  L N ++
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 24/201 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  LI    + GK  E+   +E M+  GC P+ V  T L+K      + ++A ++   
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769

Query: 98  LEKYG-EPDVFAYNALISGFCKANQI----ELANKVLDRLRSRG--FSPDVVTYNIMIGS 150
           ++K G  PDV  Y  L+ G C+   I    EL  K+L      G  F PDV++Y+I+I  
Sbjct: 770 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G  + A ++F ++      P VI+YT LI      G+ + A  L +EM        
Sbjct: 830 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889

Query: 203 ---------GMCKKGMVGQAF 214
                    G CK+G + +A 
Sbjct: 890 AVTYSVMIHGFCKEGQIDKAL 910


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 238/460 (51%), Gaps = 18/460 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++   + M+ +   P +V  ++      + ++ N  +   + LE  G   +++  N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  +   A  VL ++   G+ PD  T+N +I  L   G +  A  + D+++ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P V+TY  ++      G T  A+ LL +M                  +C+ G +  A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               + +E++G +  V++YN L+R L   GKW +G  L+ +M+SR + PNV+T+++L+  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++GK ++A ++ +    +G++P+  +Y+ L+  YC   RL  A   LD M+ + C PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV + +++  +C     D  +++F  +S  G   N  +Y+ +      SG    A  +  
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S G+ PD +TY  L+  LC +G +++A+ +  D++ ++    ++ Y  II G CK  
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  +  ++  KG KPN  TY ++I G+   G  +EA
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PD      LIK  F E K ++AV +++ ++E   +PDV  YN++++G C++    LA
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L ++  R    DV TY+ +I SLC  G I++A  +F ++     K +V+TY  L++ 
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR- 271

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G        ++ + SR   P+VI++N+LL   +  GK 
Sbjct: 272 -----------------GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  +L  EMI+RG+ PN++TY+ L+   C   +  +A ++L        +PD  ++  L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  YC   R+D  ++    +   G + + V Y+ ++  FC++G    A E+F+++   G 
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V +Y  +   L  +G   +AL +  ++    ++   + Y ++I  +C+ G V++A  
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           L   +     +P V++Y ++I G CK   ++E+  +L  M E G  PN+ TY  LI  
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +K +      E++     P +  ++   S   +  Q  L      +L   G + ++ T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           IMI   C       A+ V  ++++   +P   T+  LI+   LEG+  +A+ L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM--- 184

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                             GCQPDV++YN ++  +   G       L+ +M  R ++ +V 
Sbjct: 185 ---------------VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS +I SLCRDG  + A+ + +  + KG+     +Y+ L+   CK G+ +     L  M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S   +P+++ +N +L  F K G   +A E+++++   G  PN+ +YNT+          
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  M+  M+     PD +T+ SLI   C    VD+ + +  ++         ++Y+I+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + GFC++ +I  + E+   M   G  P+  TY +L++G+   G   +A+E+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 19/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-AVRVMEILEKYGEPDVF 107
           R G  D ++   + M   G K  VV    L++   +  K N  A+ + +++ +   P+V 
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+  F K  +++ AN++   + +RG SP+++TYN ++   C +  +  A  + D +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R+ C P ++T+T LI+   +  + D  MK+                   R++  RG   
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF------------------RNISKRGLVA 401

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++Y++L++     GK +  E+L  EM+S G+ P+V+TY IL+  LC +GK E A+++ 
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++  +      Y  +I   CK G+++ A      +   G  P+++ Y  +++  CK 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+  +A  +  K+ + G  PN  +YNT+  A    GD   +  +I EM S G   D  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 408 NSLISCL 414
             +I  L
Sbjct: 582 KMVIDML 588


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 238/460 (51%), Gaps = 18/460 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++   + M+ +   P +V  ++      + ++ N  +   + LE  G   +++  N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+ FC+  +   A  VL ++   G+ PD  T+N +I  L   G +  A  + D+++ +
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P V+TY  ++      G T  A+ LL +M                  +C+ G +  A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               + +E++G +  V++YN L+R L   GKW +G  L+ +M+SR + PNV+T+++L+  
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++GK ++A ++ +    +G++P+  +Y+ L+  YC   RL  A   LD M+ + C PD
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV + +++  +C     D  +++F  +S  G   N  +Y+ +      SG    A  +  
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S G+ PD +TY  L+  LC +G +++A+ +  D++ ++    ++ Y  II G CK  
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  +  ++  KG KPN  TY ++I G+   G  +EA
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 215/418 (51%), Gaps = 19/418 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PD      LIK  F E K ++AV +++ ++E   +PDV  YN++++G C++    LA
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L ++  R    DV TY+ +I SLC  G I++A  +F ++     K +V+TY  L++ 
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR- 261

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G        ++ + SR   P+VI++N+LL   +  GK 
Sbjct: 262 -----------------GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  +L  EMI+RG+ PN++TY+ L+   C   +  +A ++L        +PD  ++  L
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  YC   R+D  ++    +   G + + V Y+ ++  FC++G    A E+F+++   G 
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V +Y  +   L  +G   +AL +  ++    ++   + Y ++I  +C+ G V++A  
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           L   +     +P V++Y ++I G CK   ++E+  +L  M E G  PN+ TY  LI  
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 21/435 (4%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQ 121
           S ++NG   +V    +L       +K +      E++     P +  ++   S   +  Q
Sbjct: 37  SSISNG---NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQ 93

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
             L      +L   G + ++ T NIMI   C       A+ V  ++++   +P   T+  
Sbjct: 94  FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 153

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI+   LEG+  +A+ L+D M                     GCQPDV++YN ++  +  
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRM------------------VENGCQPDVVTYNSIVNGICR 195

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G       L+ +M  R ++ +V TYS +I SLCRDG  + A+ + +  + KG+     +
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ L+   CK G+ +     L  M+S   +P+++ +N +L  F K G   +A E+++++ 
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  PN+ +YNT+            A  M+  M+     PD +T+ SLI   C    VD
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           + + +  ++         ++Y+I++ GFC++ +I  + E+   M   G  P+  TY +L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 482 EGIGYGGWRAEAMEL 496
           +G+   G   +A+E+
Sbjct: 436 DGLCDNGKLEKALEI 450



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 19/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-AVRVMEILEKYGEPDVF 107
           R G  D ++   + M   G K  VV    L++   +  K N  A+ + +++ +   P+V 
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 289

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+  F K  +++ AN++   + +RG SP+++TYN ++   C +  +  A  + D +
Sbjct: 290 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R+ C P ++T+T LI+   +  + D  MK+                   R++  RG   
Sbjct: 350 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF------------------RNISKRGLVA 391

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++Y++L++     GK +  E+L  EM+S G+ P+V+TY IL+  LC +GK E A+++ 
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++  +      Y  +I   CK G+++ A      +   G  P+++ Y  +++  CK 
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+  +A  +  K+ + G  PN  +YNT+  A    GD   +  +I EM S G   D  + 
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571

Query: 408 NSLISCL 414
             +I  L
Sbjct: 572 KMVIDML 578



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 155/374 (41%), Gaps = 61/374 (16%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK +++L   E +  +     +VM T +I+   +  K   A  +   L   G +P+V  Y
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             +ISG CK   +  AN +L ++   G +P+  TYN +I +    G + ++ K+ +++  
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM-- 559

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ---------------AF 214
            +C  +    +I +   ML      AMK L       KG   +               + 
Sbjct: 560 KSCGFSADASSIKMVIDMLLS----AMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSL 615

Query: 215 QFVR--------------SLESRGCQPDVISYNML-LR--TLLNMGKWEEGEKLMT-EMI 256
            FV+              ++E+RG     ++ ++  LR  ++L   K  +   L+T E++
Sbjct: 616 TFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELL 675

Query: 257 SRGLE-------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKE---KGLTPDAY 300
           + GLE              + V Y+     + R G+    V      KE   +G+ P+  
Sbjct: 676 TWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTI 735

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI  +CK+ RLD A + LD M++ G     + Y  +LA   +        E +E L
Sbjct: 736 TYSSLIDGFCKENRLDEANQMLDLMVTKG--DSDIRY--LLAGLMRKKRKGSETEGWENL 791

Query: 361 -SDVGCPPNVSSYN 373
             D+ C     S N
Sbjct: 792 PDDLSCSTASRSSN 805


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 231/442 (52%), Gaps = 23/442 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           F  ++    + G F  +L F E  V       P+V+    +IK   +    ++A+ V  E
Sbjct: 138 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +  +  EPDVF Y  L+ G CK ++I+ A  +LD ++  G  P  VT+N++I  LC +G 
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +    K+ D +    C P  +TY  +I    L+G+ DKA+ LLD M   K          
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK---------- 307

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C P+ ++Y  L+  L+  G+  +G  L++ +  RG   N   YS LIS L +
Sbjct: 308 --------CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 359

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K+E+A+ + +   EKG  P+   Y  LI   C++G+LD A E L  M++ GC P+   
Sbjct: 360 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 419

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y++++  F K GN+ +A+ ++++++   C PN   Y+ +   L   G    A+ M + ML
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNIIILGFCKTRR 454
            +G+ PD + Y+S+I  LC  G V+  + L  +M  + +  +P V++YNI++   CK   
Sbjct: 480 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 539

Query: 455 INESIEVLAAMFEKGCKPNETT 476
           I+ +I++L +M ++GC P+  T
Sbjct: 540 ISHAIDLLNSMLDRGCNPDLIT 561



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 206/383 (53%), Gaps = 19/383 (4%)

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           SP+V+++N++I ++C  G+++ A +VF ++    C+P V TY  L+     E + D+A+ 
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           LLDEM                 G+CKKG + +  + V ++  +GC P+ ++YN ++  L 
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             GK ++   L+  M++    PN VTY  LI+ L + G++ D V +L + +E+G   + Y
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 348

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LIS   K+ + + A+     M+  GC P+IV Y+ ++   C+ G  D+A EI  ++
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + GC PN  +Y+++    + +G+  +A+ +  EM      P+EI Y+ LI  LC DG +
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF--EKGCKPNETTYV 478
            EA+ +   M     RP V++Y+ +I G C    +   +++   M   E   +P+  TY 
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 528

Query: 479 LLIEGIGYGGWRAEAMELANALV 501
           +L+  +      + A++L N+++
Sbjct: 529 ILLRALCKQNSISHAIDLLNSML 551



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 196/387 (50%), Gaps = 20/387 (5%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T+  +I +  + G   + F+VFD++ R+        + ++ +A       +KA++L   M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 203 ---GMCKK---------GMVGQAFQFVRSLESRGC--------QPDVISYNMLLRTLLNM 242
                C++          ++ Q   F R+LE   C         P+V+S+N++++ +  +
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G  +   ++  EM  +  EP+V TY  L+  LC++ + ++AV +L   + +G  P + ++
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + LI+  CK G +    + +D M   GC+P+ V YNTI+   C  G  D+A+ + +++  
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
             C PN  +Y T+ + L   G  +  + ++S +  +G   +E  Y++LIS L ++   +E
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+GL   M     +P ++ Y+ +I G C+  +++E+ E+L  M  KGC PN  TY  LI+
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425

Query: 483 GIGYGGWRAEAMELANALVSMHAISRD 509
           G    G   +A+ +   +   + +  +
Sbjct: 426 GFFKTGNSQKAIRVWKEMAKNNCVPNE 452



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 185/417 (44%), Gaps = 38/417 (9%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           K  + VRV+   +   N  L      E  +  +I      GK D+++  ++ MVA+ C P
Sbjct: 254 KKGDMVRVTKLVD---NMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVP 310

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           + V    LI    ++ +S   V ++  LE+ G   + +AY+ LISG  K  + E A  + 
Sbjct: 311 NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLW 370

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
            ++  +G  P++V Y+ +I  LC  G ++ A ++  +++   C P   TY+ LI+     
Sbjct: 371 KKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKT 430

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G + KA+++  EM                      C P+ I Y++L+  L   GK  E  
Sbjct: 431 GNSQKAIRVWKEMA------------------KNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA--AKEKGLTPDAYSYDPLIS 307
            + T M+ RGL P+VV YS +I  LC  G  E  + +      +E    PD  +Y+ L+ 
Sbjct: 473 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 532

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A CK   +  AI+ L+ M+  GC PD++  N  L A  +  N  Q    F          
Sbjct: 533 ALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF---------- 582

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
                + +   L      + A  +I  ML K + P+  T+  +I  LC+   V   +
Sbjct: 583 ----LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 635



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 44/332 (13%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           +S + V + SS E R +         E  +  LI   F+  K +E++   + MV  GC+P
Sbjct: 327 RSVDGVHLLSSLEERGH------HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQP 380

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           ++V+ + LI    +E K ++A  ++ E++ K   P+ F Y++LI GF K    + A +V 
Sbjct: 381 NIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVW 440

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +      P+ + Y+++I  LC  G +  A  ++  +L    +P V+ Y+ +I      
Sbjct: 441 KEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 500

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G  +  +KL +EM +C++                  QPDV++YN+LLR L          
Sbjct: 501 GSVEVGLKLFNEM-LCQES---------------DSQPDVVTYNILLRALCKQNSISHAI 544

Query: 250 KLMTEMISRGLEPNVVTYSILISSL------CRDG---------------KTEDAVDVLR 288
            L+  M+ RG  P+++T +I +++L       +DG               +   A  ++ 
Sbjct: 545 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIE 604

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
              +K L P+A +++ +I   CK  ++   I+
Sbjct: 605 VMLQKFLPPNASTWERIIPELCKPKKVQAIID 636


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 218/434 (50%), Gaps = 22/434 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE----KYGEPDVFAYNALIS 114
            ++ M   GC PDVV    L+K F  E+++ +A+ ++ ++     +   P+V +Y  +I+
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           GF    Q++ A  +   +  RG  P+VVTY  +I  LC   +++ A  VF Q++    KP
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              TY  LI   +  G+  + +++L+EM                   + G +PD  +Y  
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEM------------------SAHGLKPDCYTYGS 313

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L N G+  E   L   MI +G++PNV  Y ILI      G   +  D+L    E G
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L+PD + ++ + +AY K   +D A+   + M   G  PD+VNY  ++ A CK G  D A+
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV 433

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             F ++ + G  PN+  +N++   L +     +A     EML++GI PD + +N+++  L
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNL 493

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C  G V +A  L+  ME    RP VISY  +I G C   RI+E+ + L  M   G KP+E
Sbjct: 494 CTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553

Query: 475 TTYVLLIEGIGYGG 488
            TY  L+ G    G
Sbjct: 554 WTYNTLLHGYCRAG 567



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 237/511 (46%), Gaps = 53/511 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           +I   F  G+ D++      M+  G +P+VV  T +I    + +  ++A  V + +++K 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD   YN LI G+    + +   ++L+ + + G  PD  TY  ++  LC+ G    A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD ++R   KP V  Y ILI     +G   +   LL+ M                   
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG--------------------- 243
            KK M+ +A      ++ +G  PDV++Y  L+  L  +G                     
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 244 --------------KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                         KWE+ ++   EM+++G+ P+VV ++ ++ +LC  G+   A  ++  
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +  G  P   SY  LI  +C  GR+D A + LD M+S G  PD   YNT+L  +C+ G 
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A  +F ++   G  P V +Y+T+   L+++     A  +   M++ G + +   YN 
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ L ++  VDEA  L   + S  F+  + ++NI+I    K+ R  +++ + A +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             P+  TY L+ E +   G+  E  +L +A+
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAM 719



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 211/464 (45%), Gaps = 18/464 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+ +  +SM+  G KP+V +   LI  +  +   ++   ++ ++ + G  PD   +
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N + + + K   I+ A  + ++++ +G SPDVV Y  +I +LC  G ++ A   F+Q++ 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           +   P +  +  L+       + +KA +   EM                  +C KG V +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  +E  G +P VISY  L+     +G+ +E  K +  M+S GL+P+  TY+ L+ 
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             CR G+ +DA  V R     G+TP   +Y  ++       R   A E    MI+ G   
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +I  YN IL    KN   D+A ++F+ L        ++++N M  AL+ SG    A+ + 
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + + S G+ PD  TY  +   L  +G ++E   L   ME +   P     N ++      
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHR 741

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             I  +   L  + EK      +T  +LI  +    +   A  L
Sbjct: 742 GDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 21/260 (8%)

Query: 30  LLSFDVK--ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +LS  +K  E  +  L+    RAG+ D++      M+ NG  P VV  + ++   F  R+
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 88  SNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            ++A  + + ++    + +++ YN +++G  K N ++ A K+   L S+ F  ++ T+NI
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           MIG+L   G  E A  +F  +      P V TY ++ +  + EG  ++   L   M    
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM---- 719

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                         E  G  P+    N L+R LL+ G        + ++  +       T
Sbjct: 720 --------------EKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEAST 765

Query: 267 YSILISSLCRDGKTEDAVDV 286
            ++LIS L RD     A  +
Sbjct: 766 TAMLISLLSRDEYHHHATSL 785



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALW-------SSGDKIRALGMISEMLSK---GI 400
           D AL++F+ L     P +V ++N + +A+        S+ +    + + + M+ +    +
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD  TY+ LI C CR G ++        +  + +R   I  N ++ G C  +R+ E+++
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 461 VLAA-MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +L   M E GC P+  +Y  L++G        EA+EL + +
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 244/504 (48%), Gaps = 36/504 (7%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  +IK   +AGK D     +  +   G +P VV    L+    +  +  +A R+
Sbjct: 9   LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 68

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
              +E+ G  P V  +  LI+G  +  +      VL  +   G SP+ V YN +IG  C 
Sbjct: 69  KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR 128

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKK--- 207
           +G    A ++FD+++    KPT +TY ++ +A   EG+ ++A ++L++M   GM      
Sbjct: 129 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 188

Query: 208 --GMVGQAFQFVRSLES----------RGCQPDVISYNMLLRTL---------------- 239
              +V    Q  R LES          RG +P+       +R L                
Sbjct: 189 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 248

Query: 240 LNMGKW-EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           LN GK+ +E  K++  M+++G+E + +TY+I+I   C+D K E+A+ +      +G  PD
Sbjct: 249 LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPD 308

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            ++++ L+ AYC  G+++     LD M ++G  PDIV+Y TI+   CK  +  +A E   
Sbjct: 309 LFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLT 368

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +L D G  PNV  YN +      +GD   A+  +  M S GI+P  +TY SL+  +C  G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           +V+EA  +            VI Y I+I G+CK  ++ E++     M  +G  PN+ TY 
Sbjct: 429 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 488

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
            L+      G   EA +L + +V 
Sbjct: 489 TLMYAYSKSGNSEEASKLFDEMVG 512



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 200/443 (45%), Gaps = 36/443 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    R  +F E    ++ M   G  P+ V+  +LI    ++   ++A+R+  E++
Sbjct: 84  FGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMV 143

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM-I 157
            K  +P    YN +    CK  ++E A ++L+ + S G +     +N ++  L  R   +
Sbjct: 144 LKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRL 203

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM-----------------KLLD 200
           ES   + ++++    +P     T  ++     G+  +A+                 K++ 
Sbjct: 204 ESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQ 263

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
            M                 G CK   + +A +    +  RG +PD+ ++N LL    N+G
Sbjct: 264 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 323

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K EE   L+ +M + GL+P++V+Y  +I   C+      A + L    ++GL P+ + Y+
Sbjct: 324 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 383

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI  Y ++G +  AI+ ++ M S+G  P  V Y +++   C  G  ++A  IF +  + 
Sbjct: 384 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 443

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                V  Y  M       G  + A+    EM S+GI P+++TY +L+    + G  +EA
Sbjct: 444 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 503

Query: 424 VGLLVDMESTRFRPTVISYNIII 446
             L  +M  +   P  I+Y  +I
Sbjct: 504 SKLFDEMVGSGVIPDNITYGTLI 526



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 173/368 (47%), Gaps = 36/368 (9%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           SR  + +  +Y  MI +LC  G +++ F++  +L R   +PTV+TY +L+ A        
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDA-------- 55

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +CK G V +AF+    +E  G  P V+++ +L+  L    ++ E   ++ 
Sbjct: 56  ----------LCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQ 105

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM   G+ PN V Y+ LI   CR G    A+ +      K + P A +Y+ +  A CK+G
Sbjct: 106 EMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEG 165

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFC-KNGNADQALEIFEKLSDVGCPPNVSSY 372
            ++ A   L+ M+S G       +NT++A    +    +  + I  ++   G  PN    
Sbjct: 166 EMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLM 225

Query: 373 NTMFSALWSSGDKIRALGM-----------------ISEMLSKGIEPDEITYNSLISCLC 415
                 L   G    A+G+                 I  ML+KGIE D ITYN +I   C
Sbjct: 226 TACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCC 285

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +D  ++EA+ L  DM    F+P + ++N ++  +C   ++ E+  +L  M  +G +P+  
Sbjct: 286 KDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIV 345

Query: 476 TYVLLIEG 483
           +Y  +I+G
Sbjct: 346 SYGTIIDG 353



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 187/412 (45%), Gaps = 42/412 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-------------- 94
           R  + +  +     MV  G +P+  + T  +++  +  K  +AV +              
Sbjct: 199 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEA 258

Query: 95  ----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
                 +L K  E D   YN +I G CK +++E A K+   +  RGF PD+ T+N ++ +
Sbjct: 259 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 318

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C+ G +E  F + DQ+  +  +P +++Y  +I                   G CK   +
Sbjct: 319 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID------------------GHCKAKDI 360

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +++  L  RG +P+V  YN L+      G        +  M S G++P  VTY  L
Sbjct: 361 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 420

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  +C  G  E+A  +   A+E  +      Y  +I  YCK G++  A+ + + M S G 
Sbjct: 421 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 480

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ + Y T++ A+ K+GN+++A ++F+++   G  P+  +Y T+ +     G K    G
Sbjct: 481 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKTTQYG 540

Query: 391 M-----ISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                 +S++LS   I   ++ +   +  L    M D A  LL    S +F+
Sbjct: 541 QELHCDLSKLLSADWIMDTQVHFGHQLKHLESQCMDDNARWLLNHNTSCKFQ 592



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 147/315 (46%), Gaps = 53/315 (16%)

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           ESR    +  SY  +++ L   GK + G +++ E+   GL+P VVTY++L+ +LC+ G+ 
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 281 EDAVD-----------------------------------VLRAAKEKGLTPDAYSYDPL 305
           E+A                                     VL+  ++ G++P+   Y+ L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  +C+ G    A+   D M+     P  V YN I  A CK G  ++A  I E +  +G 
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 366 PPNVSSYNTMFSALWSSGDKIRA-LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             +   +NT+ + L     ++ + + + +EM+++G+ P++    + +  LC+ G   EAV
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 425 GLLVDM--------ESTRFRPTV---------ISYNIIILGFCKTRRINESIEVLAAMFE 467
           G+            E+T+   T+         I+YNI+I G CK  ++ E+I++   M  
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302

Query: 468 KGCKPNETTYVLLIE 482
           +G KP+  T+  L+ 
Sbjct: 303 RGFKPDLFTFNTLLH 317


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 239/477 (50%), Gaps = 34/477 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFA 108
           G+ +E++  +  M   GC P+ V    L+  F +  + + A RV+ ++ + G  +P++  
Sbjct: 24  GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 83

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N++++G CKA ++E A KV D +   G +PDVV+YN ++   C  G +  +  VF ++ 
Sbjct: 84  FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P V+T+T LI AT   G  ++A+ L+ +M                 G CKKG + 
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A   V  +   G QP V+ YN L+     +G+ +   +L+ EM ++ ++P+VVTYS +I
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 263

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C+ G  + A  + +   +KG+ PDA +Y  LI   C++ RL+ A E  + M+  G  
Sbjct: 264 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 323

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y T++   CK GN ++AL + +++   G  P+V +Y+ + + L  S     A  +
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383

Query: 392 ISEMLSKGIEPDEITYNSLISC---------------LCRDGMVDEAVGLLVDMESTRFR 436
           + ++  +   PD I Y++L+ C                C  G++ EA  +   M    ++
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
                Y+I+I G C+   + +++     M   G  PN T+ + L+ G+   G   EA
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 218/417 (52%), Gaps = 20/417 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           MV +G  P+V     L++      +  +AV V+  +   G  P+   YN L++ FC+A +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 122 IELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           ++ A +V+  +R  G + P++VT+N M+  LC  G +E A KVFD+++R+   P V++Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
            L+                   G CK G + ++      +  RG  PDV+++  L+    
Sbjct: 121 TLLS------------------GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 162

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G  E+   L+ +M  RGL  N VT++ LI   C+ G  +DA+  +   ++ G+ P   
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            Y+ LI+ YCK GR+DLA E +  M +    PD+V Y+TI++ +CK GN D A ++ +K+
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  P+  +Y+++   L        A  +   ML  G++PDE TY +LI   C++G V
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           ++A+ L  +M      P V++Y+++I G  K+ R  E+  +L  ++ +   P+   Y
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 399



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 203/395 (51%), Gaps = 21/395 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+V+ YN L+   C   ++E A  V+  +R  G +P+ VTYN ++ + C  G ++ A +V
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 164 FDQLLRD--NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
              L+R+  N KP ++T+  ++      G+ + A K+ DEM              VR   
Sbjct: 68  V-SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM--------------VRE-- 110

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  PDV+SYN LL     +G   E   + +EM  RGL P+VVT++ LI + C+ G  E
Sbjct: 111 --GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 168

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            AV ++   +E+GL  +  ++  LI  +CK G LD A+  ++ M   G  P +V YN ++
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 228

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G  D A E+  ++      P+V +Y+T+ S     G+   A  +  +ML KG+ 
Sbjct: 229 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD ITY+SLI  LC +  +++A  L  +M     +P   +Y  +I G CK   + +++ +
Sbjct: 289 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 348

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              M  KG  P+  TY +LI G+       EA  L
Sbjct: 349 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 195/415 (46%), Gaps = 34/415 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI  + +AG  ++++  +  M   G + + V  T LI  F ++   + A+  +E + 
Sbjct: 154 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 213

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P V  YNALI+G+CK  +++LA +++  + ++   PDVVTY+ +I   C  G ++
Sbjct: 214 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD 273

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF++  ++L+    P  ITY+ LI+                  G+C++  +  A +   
Sbjct: 274 SAFQLNQKMLKKGVLPDAITYSSLIR------------------GLCEEKRLNDACELFE 315

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G QPD  +Y  L+      G  E+   L  EMI +G+ P+VVTYS+LI+ L +  
Sbjct: 316 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 375

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPL---------------ISAYCKDGRLDLAIEFLD 323
           +T++A  +L     +   PD   YD L               +  +C  G +  A +   
Sbjct: 376 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 435

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+      D   Y+ ++   C+ GN  +AL   +++   G  PN +S  ++   L+  G
Sbjct: 436 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
             + A   I ++L+     D     +LI    ++G VD  + +L  M      P+
Sbjct: 496 MVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 16/208 (7%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  R++ + E   N   L     E  +  LI    + G  +++L   + M+  G  PDVV
Sbjct: 303 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 362

Query: 74  MCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL---------------ISGFC 117
             + LI    +  ++ +A R++ ++  +   PD   Y+AL               + GFC
Sbjct: 363 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 422

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               ++ A+KV   +  R +  D   Y+I+I   C  G +  A     Q+LR    P   
Sbjct: 423 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 482

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +   L++    EG   +A   + ++  C
Sbjct: 483 STISLVRGLFEEGMVVEADNAIQDLLTC 510


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 222/427 (51%), Gaps = 33/427 (7%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D++++N LI  FC  +++  A     +L   GF P +VT+N ++  LC    +  A  +F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
            Q+    CKP V+T+T L+     EG+  +A+ LLD M                 GMCK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 208 GMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G    A   +R +E     +PDV+ Y+ ++  L   G+  + + L  EM  +G+ P++VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS +I+  C  GK  +A  +L+    + ++PD  ++  LI+A  K+G L+ A + L  MI
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS----DV-------GCPPNVSSYNTM 375
           S G  P++V  NT+L   C +G    ALE+F+ +     D+       G  P+V +YN +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L + G  + A  +  EM  +GI PD +TY+S+I+ LC+   +DEA  +   M S  F
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P ++++N +I G+CK   +++ +E+   M  +G   N  TY+ LI G    G    +++
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 496 LANALVS 502
           +   ++S
Sbjct: 430 IFQEMIS 436



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 197/386 (51%), Gaps = 30/386 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV +G +P+ +    ++    +   +  A+ ++  +E
Sbjct: 84  FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 100 K--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  + +PDV  Y+A+I G  K  +   A  +   ++ +G  PD+VTY+ MI   CS G  
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A ++  ++L     P V+T++ LI A + EG  + A  LL EM               
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 203 --GMCKKGMVGQAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGE 249
             G+C  G +  A +  ++++             G +PDV +YN+L+  L+N GK+ E E
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +L  EM  RG+ P+ VTYS +I+ LC+  + ++A  +  +   K  +P+  +++ LI+ Y
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G +D  +E    M   G + + + Y T++  F K GN + +L+IF+++   G  P+ 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 370 SSYNTMFSALWSSGDKIRALGMISEM 395
            +   M + LWS  +  +AL M+ E+
Sbjct: 444 ITIRNMLTGLWSKEELKKALAMLEEL 469



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           P ++ S+N +     S      AL    ++   G  P  +T+N+L+  LC +  V EA+ 
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L   M     +P V+++  ++ G C+  R+ E++ +L  M E G +PN+ TY  +++G+ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 486 YGGWRAEAMELANALVSMHAISRD 509
             G    A+ L   +  +  I  D
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPD 151


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 222/427 (51%), Gaps = 33/427 (7%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D++++N LI  FC  +++  A     +L   GF P +VT+N ++  LC    +  A  +F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
            Q+    CKP V+T+T L+     EG+  +A+ LLD M                 GMCK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 208 GMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G    A   +R +E     +PDV+ Y+ ++  L   G+  + + L  EM  +G+ P++VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS +I+  C  GK  +A  +L+    + ++PD  ++  LI+A  K+G L+ A + L  MI
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS----DV-------GCPPNVSSYNTM 375
           S G  P++V  NT+L   C +G    ALE+F+ +     D+       G  P+V +YN +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L + G  + A  +  EM  +GI PD +TY+S+I+ LC+   +DEA  +   M S  F
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P ++++N +I G+CK   +++ +E+   M  +G   N  TY+ LI G    G    +++
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 496 LANALVS 502
           +   ++S
Sbjct: 430 IFQEMIS 436



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 197/386 (51%), Gaps = 30/386 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV +G +P+ +    ++    +   +  A+ ++  +E
Sbjct: 84  FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 100 K--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  + +PDV  Y+A+I G  K  +   A  +   ++ +G  PD+VTY+ MI   CS G  
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A ++  ++L     P V+T++ LI A + EG  + A  LL EM               
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 203 --GMCKKGMVGQAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGE 249
             G+C  G +  A +  ++++             G +PDV +YN+L+  L+N GK+ E E
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +L  EM  RG+ P+ VTYS +I+ LC+  + ++A  +  +   K  +P+  +++ LI+ Y
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G +D  +E    M   G + + + Y T++  F K GN + +L+IF+++   G  P+ 
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443

Query: 370 SSYNTMFSALWSSGDKIRALGMISEM 395
            +   M + LWS  +  RAL M+ E+
Sbjct: 444 ITIRNMLTGLWSKEELKRALAMLEEL 469



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           P ++ S+N +     S      AL    ++   G  P  +T+N+L+  LC +  V EA+ 
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L   M     +P V+++  ++ G C+  R+ E++ +L  M E G +PN+ TY  +++G+ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 486 YGGWRAEAMELANALVSMHAISRD 509
             G    A+ L   +  +  I  D
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPD 151


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 256/509 (50%), Gaps = 22/509 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V    +  ++    + G  + +  F+  ++  G   D  + T L+  F +      A+
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDAL 250

Query: 93  RVMEILEKYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +V +++ + G   P+  +Y+ LI G C+  ++E A  + D++  +G  P   TY ++I +
Sbjct: 251 KVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC RG+I+ AF +FD+++   CKP V TYT+LI     +G+ ++A  +  +M        
Sbjct: 311 LCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G CK G V  AF+ +  +E R C+P+V ++N L+  L  +GK  +   L+ 
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            M+  GL P++V+Y++LI  LCR+G    A  +L +     L PD  ++  +I+A+CK G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           + D+A  FL  M+  G   D V   T++   C  G    AL I E L  +       S N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 374 TMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
            +   L S G K++  L M+ ++   G+ P  +TY +L+  L R G +  +  +L  M+ 
Sbjct: 551 VILDML-SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKL 609

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           +   P V  Y III G C+  R+ E+ ++L+AM + G  PN  TY ++++G    G    
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 493 AMELANALVSM-HAISRDTFKRLNRTFPL 520
           A+E   A+V   + ++   +  L R F L
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLRGFVL 698



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 195/400 (48%), Gaps = 19/400 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y++L+    K +   LA     R+ + GF   ++ Y  ++ +LC  G  E+A ++F    
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA-EMF---- 217

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG-CQP 227
              CK       IL    +L+     ++ L    G C+   +  A +    +   G C P
Sbjct: 218 --MCK-------ILKVGFLLDSHIVTSLLL----GFCRGLNLRDALKVFDLMSREGTCAP 264

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +SY++L+  L  +G+ EE   L  +M  +G +P+  TY++LI +LC  G  + A ++ 
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G  P+ ++Y  LI   C+DG+++ A      M+ DG  P ++ YN ++  +CK+
Sbjct: 325 DEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKD 384

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A E+   +    C PNV ++N +   L   G   +A+ ++  ML  G+ PD ++Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LCR+G ++ A  LL  M S    P  +++  II  FCK  + + +   L  M  
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           KG   +E T   LI+G+   G   +A+ +   LV M  ++
Sbjct: 505 KGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 238/558 (42%), Gaps = 96/558 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI      G+ +E+    + M   GC+P     T LIK        +KA  +  E++ + 
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y  LI G C+  +IE AN V  ++   G  P V+TYN +I   C  G +  AF
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++   + +  CKP V T+  L++     G+  KA+ LL  M                 G+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C++G +  A++ + S+ S   +PD +++  ++      GK +     +  M+ +G+  + 
Sbjct: 452 CREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511

Query: 265 VTYSILISSLCRDGKTEDAVDVL-----------------------RAAKEK-------- 293
           VT + LI  +C  GKT DA+ +L                       +  K K        
Sbjct: 512 VTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK 571

Query: 294 ----GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               GL P   +Y  L+    + G +  +   L+ M   GCLP++  Y  I+   C+ G 
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGR 631

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A ++   + D G  PN  +Y  M     ++G   RAL  +  M+ +G E ++  Y+S
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691

Query: 410 L----------------------------------------ISCLCRDGMVDEAVGLL-V 428
           L                                        ++ LC++G  DE+ GL+  
Sbjct: 692 LLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQT 751

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            ++S  F    I  +II+  +C  ++  + +E++  + + G  P+  ++ L+I+G+   G
Sbjct: 752 ILKSGVFLEKAI--DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEG 809

Query: 489 WRAEAMELANALVSMHAI 506
               A EL   L++ + +
Sbjct: 810 DTERARELVMELLTSNGV 827



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/475 (23%), Positives = 198/475 (41%), Gaps = 96/475 (20%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L++   R GK  ++++ ++ M+ NG  PD+V    LI    +E   N A +++  + 
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  EPD   + A+I+ FCK  + ++A+  L  +  +G S D VT   +I  +C+ G   
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528

Query: 159 SAFKVFDQL------------------LRDNCK-----------------PTVITYTILI 183
            A  + + L                  L   CK                 P+V+TYT L+
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G+ + G +  +F+ +  ++  GC P+V  Y +++  L   G
Sbjct: 589 D------------------GLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFG 630

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYS 301
           + EE EKL++ M   G+ PN VTY++++     +GK + A++ +RA  E+G  L    YS
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690

Query: 302 ---------------YDP-----------------------LISAYCKDGRLDLAIEFLD 323
                           DP                       L++  CK+GR D +   + 
Sbjct: 691 SLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQ 750

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            ++  G   +    + I+ ++C      + +E+   +   G  P+  S+  +   L   G
Sbjct: 751 TILKSGVFLEKA-IDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEG 809

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           D  RA  ++ E+L+     ++      + CL   G   E +  LVD   +R RPT
Sbjct: 810 DTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVID-LVDQLHSRERPT 863


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 244/484 (50%), Gaps = 22/484 (4%)

Query: 39  QFMKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           Q   +I RS  A G  D ++    S+   G  PD V  + L+    +  + + A+ +++ 
Sbjct: 159 QTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDE 218

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRG 155
           +  YG + D   YNAL+SG  +    E A KV ++L R  G SP++ TY +M+  LC  G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             + A +V+ +++ +N +   +TY ILI      G  D A ++  +M             
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+ G  G+A++F  S    G +  + +YN++ + LL+ G   E  +L+ ++ + 
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEND 397

Query: 259 G-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
               P+ VT+  LI  LC +G    A ++L  A+  G   D +SY  +I+ +CKDGR   
Sbjct: 398 ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHD 457

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A E    M+ DGC P+   YN ++  FC+    + A++I+ +++  GC P + +YNT+  
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLID 517

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +     A  +  EML +G +PD  TY SLI  LCRD  VD A+ +  ++     + 
Sbjct: 518 GLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV 577

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V+ +NI+I G C   +++E+  +   M EK C PN  TY  L++G    G   +A  L 
Sbjct: 578 DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637

Query: 498 NALV 501
            A++
Sbjct: 638 TAIL 641



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 206/424 (48%), Gaps = 24/424 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G+F E+      M+AN  + D V    LI    +    + A RV   + K G   DV 
Sbjct: 276 KLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVS 335

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSP--DVVTYNIMIGSLCSRGMIESAFKVFD 165
            YN+LI GFC+  +   A K  D   S GFS    + TYNIM   L   GM+  A ++  
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKFWD---STGFSGIRQITTYNIMTKGLLDSGMVSEATELLK 392

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKK 207
           QL  D +C P  +T+  LI      G  ++A ++L++                    CK 
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G    A +  +++   GC+P+   YN L+     + K  +  K+  EM S G  P ++TY
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI  LC+  K ++A  + +   E+G  PD  +Y  LI   C+D ++D+A+   D ++ 
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G   D++ +N ++   C  G  D+A  I+ ++ +  C PN+ +YNT+    +  G   +
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  + + +L  G++PD +TYN+ I  LC      E V LL ++ +T   PTVI+++I++ 
Sbjct: 633 AASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVR 692

Query: 448 GFCK 451
              K
Sbjct: 693 AVIK 696



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 205/438 (46%), Gaps = 57/438 (13%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSLCSRGMIES 159
           P V ++N L+  F +A +   A+     L    F    +P++ TYNI++ SLC+RG ++ 
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A  +F  L R    P  +TY+ L+       Q D A+ LLDEM                 
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236

Query: 203 GMCKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           G  + GM  +A +    L    G  P++ +Y ++L  L  +G+++E  ++ + M++   +
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VTY ILI  LCR G  + A  V     + GL  D   Y+ LI  +C+ GR   A +F
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356

Query: 322 LDY-----------------------MISDG------------CLPDIVNYNTILAAFCK 346
            D                        M+S+             C PD V + T++   C+
Sbjct: 357 WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCE 416

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG A++A EI E   + G   +V SY++M +     G    A  +   M+  G +P+   
Sbjct: 417 NGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHV 476

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+LI+  CR   +++A+ + ++M S    PT+I+YN +I G CK  +  E+  +   M 
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536

Query: 467 EKGCKPNETTYVLLIEGI 484
           E+G KP+  TY  LI G+
Sbjct: 537 ERGFKPDIRTYASLIRGL 554



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 160/332 (48%), Gaps = 19/332 (5%)

Query: 209 MVGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----ISRGLEPN 263
           M   A    R L S  GC P V S+N LL   +   ++ + +     +      R + PN
Sbjct: 98  MPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPN 157

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY+I++ SLC  G  + AV +  + + +G+ PD  +Y  L+S   K  +LD A++ LD
Sbjct: 158 LQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLD 217

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            M + G   D V YN +L+   + G  ++A++++E+L  D G  PN+++Y  M   L   
Sbjct: 218 EMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKL 277

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  + S M++   + D +TY  LI  LCR G VD A  +  DM        V  Y
Sbjct: 278 GRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVY 337

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N +I GFC+  R  E+ +   +    G +   TTY ++ +G+   G  +EA EL   L +
Sbjct: 338 NSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEN 396

Query: 503 MHAISRD--TFKRL----------NRTFPLLD 522
             + S D  TF  L          NR F +L+
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILE 428



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 19/280 (6%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEI 97
            +  +I R  + G+  ++    ++MV +GCKP+  +   LI  F +  K N A+++ +E+
Sbjct: 441 SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 P +  YN LI G CKA + + A+ +   +  RGF PD+ TY  +I  LC    +
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV 560

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A +++D++L    +  V+ + ILI                   G+C  G V +AF   
Sbjct: 561 DVALRIWDEILDAGLQVDVMVHNILIH------------------GLCSAGKVDEAFCIY 602

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             ++ + C P++++YN L+     +G  ++   L T ++  GL+P++VTY+  I  LC  
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            +T + V +L      G+ P   ++  L+ A  K G + +
Sbjct: 663 NRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 41/204 (20%)

Query: 340 ILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSA-------------------- 378
           +L+AF +    D AL  F  L S +GC P V S+NT+  A                    
Sbjct: 89  VLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG 148

Query: 379 -------------------LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
                              L + GD  RA+ + S +  +G+ PD +TY++L+S L +   
Sbjct: 149 AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQ 208

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKPNETTYV 478
           +D A+ LL +M +   +   + YN ++ G  +T    ++++V   +  + G  PN  TY 
Sbjct: 209 LDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYK 268

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
           ++++G+   G   EA E+ + +++
Sbjct: 269 VMLDGLCKLGRFKEAGEVWSRMMA 292


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 239/485 (49%), Gaps = 21/485 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVM---EILEKYGEPDVFAYNALISGFCKANQIELAN 126
           P  ++ T L  +     + ++   V     IL     P +F +  ++    K N  + A 
Sbjct: 17  PKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAI 76

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +   +   G + D+VT+NI+I      G    +F VF  +L+   +P  IT T LI+  
Sbjct: 77  SLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGL 136

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
            L+GQ  +A+   D++                 G+CK G    A Q +R ++ +  QP+V
Sbjct: 137 CLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNV 196

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN ++ ++  +    E   L +EM+S+G+ P+VVTYS LIS  C  GK  DA+ +   
Sbjct: 197 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNK 256

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              + + PD Y++  L+  +CK+GR+  A   L  M+  G  PD+V Y +++  +C    
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A  IF  ++  G   NV SYN M +          A+ +  EM  K I PD +TYNS
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  LC+ G +  A+ L+ +M         I+YN I+   CK  +++++I +L  M ++G
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTFPLLDVYKEIS 528
            +P+  TY +LI+G+  GG   +A  +  + LV  + I+  T+  + + F   D++ +  
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKAL 496

Query: 529 HLATK 533
            L +K
Sbjct: 497 ALLSK 501



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 227/479 (47%), Gaps = 54/479 (11%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           +F K++    +   +  ++     M  NG   D+V    LI  F Q   ++ +  V   I
Sbjct: 58  EFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI 117

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K  EP+      LI G C   QI  A    D++ + GF  + V Y  +I  LC  G  
Sbjct: 118 LKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQT 177

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++     +P V+ Y  +I +                  MCK  +V +AF   
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIIDS------------------MCKVKLVNEAFDLY 219

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+G  PDV++Y+ L+     +GK  +   L  +MIS  + P+V T+SIL+   C++
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279

Query: 278 GKTEDAVDVLRAAKEKGLTPDAY-----------------------------------SY 302
           G+ ++A +VL    ++G+ PD                                     SY
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + +I+ +CK  ++D A+     M     +PD+V YN+++   CK+G    AL++ +++ D
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G P +  +YN++  AL  +    +A+ ++++M  +GI+PD  TY  LI  LC+ G + +
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           A  +  D+    +  TV +Y ++I GFC     ++++ +L+ M + GC PN  TY ++I
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 221/458 (48%), Gaps = 25/458 (5%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L++F++    F +L    F    F        +++  G +P+ +  T LIK    + + +
Sbjct: 91  LVTFNILINCFSQLGHTHFSFSVF-------ANILKKGYEPNAITLTTLIKGLCLKGQIH 143

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +A+   + +   G   +   Y  LI+G CK  Q   A ++L R+  +   P+VV YN +I
Sbjct: 144 QALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            S+C   ++  AF ++ +++     P V+TY+ LI    + G+ + A+ L ++M      
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN 263

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G CK+G V +A   +  +  +G +PDV++Y  L+     + +  + + +
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              M   G+  NV +Y+I+I+  C+  K ++A+++ +    K + PD  +Y+ LI   CK
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            G++  A++ +D M   G   D + YN+IL A CKN   D+A+ +  K+ D G  P++ +
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y  +   L   G    A  +  ++L KG      TY  +I   C + + D+A+ LL  ME
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
                P   +Y IIIL   +    + + ++L  M  +G
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 192/388 (49%), Gaps = 18/388 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F + +  +  LI    + G+   +L  +  +     +P+VVM   +I    + +  N+
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 214

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E++ K   PDV  Y+ALISGFC   ++  A  + +++ S   +PDV T++I++ 
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C  G ++ A  V   +++   KP V+TY  L+    L  Q +KA  + + M       
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK   V +A    + +  +   PDV++YN L+  L   GK     KL+
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  RG+  + +TY+ ++ +LC++ + + A+ +L   K++G+ PD Y+Y  LI   CK 
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GRL  A    + ++  G    +  Y  ++  FC N   D+AL +  K+ D GC PN  +Y
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY 514

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
             +  +L+   +   A  ++ EM+++G+
Sbjct: 515 EIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 148/299 (49%), Gaps = 18/299 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK ++++     M++    PDV   + L+  F +E +  +A  V+ ++ K G +PDV  Y
Sbjct: 245 GKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTY 304

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            +L+ G+C   Q+  A  + + +   G + +V +YNIMI   C    ++ A  +F ++  
Sbjct: 305 CSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHC 364

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P V+TY  LI      G+   A+KL+DEM                  +CK   V +
Sbjct: 365 KNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 424

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  ++  G QPD+ +Y +L+  L   G+ ++ + +  +++ +G    V TY+++I 
Sbjct: 425 AIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQ 484

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             C +   + A+ +L   ++ G  P+A +Y+ +I +  +    D+A + L  MI+ G L
Sbjct: 485 GFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 235/452 (51%), Gaps = 19/452 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D++L     M+     P +    KL+    + +  +  + + + ++ +G  P
Sbjct: 30  KSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPP 89

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV+    +I+ FC  N+++ A  VL ++   G  PD  T+  ++  LC  G I  A  VF
Sbjct: 90  DVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVF 149

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D+++ +  +P V+TY  L+                   G+CK   + +A      + ++G
Sbjct: 150 DKMVGEGFQPNVVTYGTLMN------------------GLCKDRQLTEALNLFSEMIAKG 191

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PD+ +YN L+  L N+ +W+    L+ EM+   + PNVV+ +I++ +LC++GK  +A 
Sbjct: 192 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAH 251

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           DV+    + G+ PD  +Y  L+  +C    +D A++  D M+ +GC+ ++V+YNT++  +
Sbjct: 252 DVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGY 311

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK    D+A+ +FE++      PN  +Y+T+   L   G    A+ + +EM++ G  P+ 
Sbjct: 312 CKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNL 371

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY+ L+  LC++  + EA+ LL  +E +   P V  YNI I G C+   +  + ++ + 
Sbjct: 372 VTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN 431

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +  +G +P+  T+ ++I G+   G   EA +L
Sbjct: 432 LAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 218/468 (46%), Gaps = 18/468 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +   +   L   + M + G  PDV   T +I  F    + + A+ V+  +
Sbjct: 58  EFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI 117

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G +PD   +  L+ G C   +I  A  V D++   GF P+VVTY  ++  LC    +
Sbjct: 118 LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQL 177

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  +F +++     P + TY  LI A     +      LL+EM               
Sbjct: 178 TEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK+G V +A   V  +   G +PDV++Y  L+       + +E  K+   M+  G 
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             NVV+Y+ LI+  C+  + + A+ +      + L P+  +Y  LI   C  GRL  AI 
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + M++ G +P++V Y+ +L   CKN    +A+ + + +      P+V  YN     + 
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +GD   A  + S +  +G++PD  T+N +I  LC+ G++DEA  L  +M+         
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +YN I  G  +  + + +I++L  M  +G   + +T  LL++ +   G
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 205/403 (50%), Gaps = 19/403 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  L++     GK  E+L   + MV  G +P+VV    L+    ++R+  +A+ +  E++
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   PD+F YN+LI   C   + +    +L+ +      P+VV+ NI++ +LC  G + 
Sbjct: 189 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 248

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  V D +++   +P V+TY  L+    L  + D+A+K+ D M                
Sbjct: 249 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 308

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK   + +A      +  +   P+ ++Y+ L+  L ++G+ ++   L  EM++ G  
Sbjct: 309 NGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQI 368

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+VTYSIL+  LC++ +  +A+ +L+A +   L PD   Y+  I   C+ G L+ A + 
Sbjct: 369 PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDL 428

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              +   G  PD+  +N ++   CK G  D+A ++F ++ + GC  N  +YNT+   L  
Sbjct: 429 FSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQ 488

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +    RA+ ++ EML++G   D  T   L+  L  DG+ D++V
Sbjct: 489 NNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL-DQSV 530



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 22/406 (5%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L  +  P +F +  L++   K         +  ++ S G  PDV T  I+I S C    
Sbjct: 47  MLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNR 106

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  V  ++L+   +P   T+T L++                  G+C  G +G+A   
Sbjct: 107 VDFALSVLAKILKLGHQPDTATFTTLVR------------------GLCVVGKIGEALDV 148

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              +   G QP+V++Y  L+  L    +  E   L +EMI++G+ P++ TY+ LI +LC 
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + +    +L    +  + P+  S + ++ A CK+G++  A + +D MI  G  PD+V 
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++   C     D+A+++F+ +   GC  NV SYNT+ +         +A+ +  EM 
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            + + P+ +TY++LI  LC  G + +A+ L  +M +    P +++Y+I++   CK  R+ 
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E++ +L A+      P+   Y + I+G+     RA  +E A  L S
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGM----CRAGDLEAARDLFS 430



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 18/254 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYN 110
           + DE++   + MV NGC  +VV    LI  + + ++ +KA+ + E +  +   P+   Y+
Sbjct: 281 EMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYS 340

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G C   +++ A  + + + + G  P++VTY+I++  LC    +  A  +   +   
Sbjct: 341 TLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGS 400

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           N  P V  Y I I      G  + A  L   +                 G+CK+G++ +A
Sbjct: 401 NLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEA 460

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  R ++  GC  +  +YN + + LL   K     +L+ EM++RG   +V T ++L+  
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520

Query: 274 LCRDGKTEDAVDVL 287
           L  DG  +    +L
Sbjct: 521 LSDDGLDQSVKQIL 534



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D AL  F ++  +  PP +  +  + +++         L +  +M S GI PD  T   +
Sbjct: 38  DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIV 97

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  C    VD A+ +L  +     +P   ++  ++ G C   +I E+++V   M  +G 
Sbjct: 98  INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +PN  TY  L+ G+       EA+ L + +++   IS D F
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIA-KGISPDIF 197



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG  + +     ++   G +PDV     +I+   +    ++A ++   +++ G   +  
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  G  + N+   A ++L+ + +RGFS DV T  +++  L   G+ +S  ++  + 
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEF 537

Query: 168 LR 169
           +R
Sbjct: 538 MR 539



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 1/151 (0%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +  E++  ++++  +   PDV +    I    +      A  +   L   G +PDV+ +N
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I G CK   ++ A+K+   +   G   +  TYN +   L        A ++ +++L  
Sbjct: 446 IMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
                V T  +L++    +G      ++L E
Sbjct: 506 GFSADVSTTALLVKMLSDDGLDQSVKQILCE 536


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 219/420 (52%), Gaps = 22/420 (5%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           ME+LE    P+++ YN +++G+CK   +E AN+ +  +   G  PD  TY  +I   C R
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQR 266

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++SAFKVF ++    C+   + YT LI    +E + D+AM L                
Sbjct: 267 KDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDL---------------- 310

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            FV+ ++   C P V +Y +L++ L    +  E   L+ EM  +G++PN+ TY++LI SL
Sbjct: 311 -FVK-MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C   K E A ++L    EKGL P+  +Y+ LI+ YCK G ++ A++ ++ M S    P+ 
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++  +CK  N  +A+ +  K+ +    P+V +YN++      SG+   A  ++S 
Sbjct: 429 RTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M  +G+ PD  TY S+I  LC+   V+EA  L   +E     P V+ Y  +I G+CK  +
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH---AISRDTF 511
           +NE+  +L  M  K C PN  T+  LI G+   G   EA  L   +V +     +S DT 
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 223/449 (49%), Gaps = 20/449 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF-QERKSNKAVRVM 95
           E  +  LI       + DE++     M  + C P V   T LIK     ERKS     V 
Sbjct: 288 EVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  +P++  Y  LI   C   ++E A ++L ++  +G  P+V+TYN +I   C RG
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           MIE A  V + +   N +P   TY  LI+                  G CK+  V +A  
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIK------------------GYCKRN-VHKAMG 448

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R   PDV++YN L+      G ++   +L++ M  RGL P+  TY+ +I SLC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  + E+A D+  + ++K + P+   Y  LI  YCK G+++ A   L+ M+S  CLP+ +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++   C +G   +A  + EK+  +   P VS+   +   L   GD   A     +M
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           LS G +PD  TY + I   CR+G + +A  ++  M+     P + +Y+ +I G+    R 
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           N +  VL  M + GC+P++ T++ LI+ +
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 229/495 (46%), Gaps = 38/495 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + G  +++L  +E M +   +P+     +LIK + + R  +KA+ V+ ++LE+ 
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERK 457

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV  YN+LI G C++   + A ++L  +  RG  PD  TY  MI SLC    +E A 
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD L + +  P V+ YT LI      G+ ++A  +L++M                 G+
Sbjct: 518 DLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G + +A      +     QP V +  +L+  LL  G ++   +   +M+S G +P+ 
Sbjct: 578 CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+  I + CR+G+ +DA D++   KE G++PD ++Y  LI  Y   GR + A   L  
Sbjct: 638 HTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697

Query: 325 MISDGCLPDIVNYNTILAAF-------CKNGNA-----------DQALEIFEKLSDVGCP 366
           M   GC P    + +++           K G             D  +E+ EK+ + G  
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVT 757

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEITYNSLISCLCRDGMVDEAVG 425
           PN  SY  +   +   G+   A  +   M  K GI P E+ +N+L+SC C+    +EA  
Sbjct: 758 PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAK 817

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           ++ DM      P + S  I+I    K         V   + + G   +E  + ++I+G+G
Sbjct: 818 VVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVG 877

Query: 486 YGGWRAEAMELANAL 500
             G      EL N +
Sbjct: 878 KQGLVEAFYELFNVM 892



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 211/476 (44%), Gaps = 38/476 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK    + +  E+L  ++ M   G KP++   T LI     + K  KA  ++ ++LEK 
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  YNALI+G+CK   IE A  V++ + SR   P+  TYN +I   C R  +  A 
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAM 447

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------M 204
            V +++L     P V+TY  LI      G  D A +LL  M                  +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL 507

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   V +A     SLE +   P+V+ Y  L+      GK  E   ++ +M+S+   PN 
Sbjct: 508 CKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +T++ LI  LC DGK ++A  +     +  L P   +   LI    KDG  D A      
Sbjct: 568 LTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQ 627

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S G  PD   Y T +  +C+ G    A ++  K+ + G  P++ +Y+++       G 
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGR 687

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLIS-----------------CLCRDGM-VDEAVGL 426
              A  ++  M   G EP + T+ SLI                  C+  + M  D  V L
Sbjct: 688 TNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVEL 747

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK-GCKPNETTYVLLI 481
           L  M      P   SY  ++LG C+   +  + +V   M +K G  P+E  +  L+
Sbjct: 748 LEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 211/446 (47%), Gaps = 37/446 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R+G FD +   +  M   G  PD    T +I    + ++  +A  + + LE
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLE 524

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    P+V  Y ALI G+CKA ++  A+ +L+++ S+   P+ +T+N +I  LC+ G ++
Sbjct: 525 QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLK 584

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + +++++ + +PTV T TILI   + +G  D A +   +M                
Sbjct: 585 EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C++G +  A   V  ++  G  PD+ +Y+ L++   ++G+      ++  M   G E
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704

Query: 262 PNVVTYSILISSLC--RDGKTEDA----------------VDVLRAAKEKGLTPDAYSYD 303
           P+  T+  LI  L   + GK +                  V++L    E G+TP+A SY+
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYE 764

Query: 304 PLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
            L+   C+ G L +A +  D+M   +G  P  + +N +L+  CK    ++A ++ + +  
Sbjct: 765 KLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC 824

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           VG  P + S   +   L+  G+K R   +   +L  G   DE+ +  +I  + + G+V+ 
Sbjct: 825 VGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEA 884

Query: 423 AVGLLVDMESTRFRPTVISYNIIILG 448
              L   ME      +  +Y+++I G
Sbjct: 885 FYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 208 GMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G+V +  Q ++  LE + C P++ +YN ++     +G  EE  + ++ ++  GL+P+  T
Sbjct: 197 GLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFT 255

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C+    + A  V +    KG   +  +Y  LI   C + R+D A++    M 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMK 315

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            D C P +  Y  ++ A C +    +AL + +++ + G  PN+ +Y  +  +L S     
Sbjct: 316 DDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLE 375

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +A  ++ +ML KG+ P+ ITYN+LI+  C+ GM+++A+ ++  MES   RP   +YN +I
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+CK R +++++ VL  M E+   P+  TY  LI+G
Sbjct: 436 KGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 145/282 (51%), Gaps = 7/282 (2%)

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + +C+K    ++F+    L   GC      YN LL +L   G  +E +++  EM+   + 
Sbjct: 163 LDLCRKMNKDESFELKYKL-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+ TY+ +++  C+ G  E+A   +    E GL PD ++Y  LI  YC+   LD A + 
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M   GC  + V Y  ++   C     D+A+++F K+ D  C P V +Y  +  AL  
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           S  K  AL ++ EM  KGI+P+  TY  LI  LC    +++A  LL  M      P VI+
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +I G+CK   I ++++V+  M  +  +PN  TY  LI+G
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 236/475 (49%), Gaps = 34/475 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G+  + L     M  NGC P+VV    LI  + +  + ++A  +++ +   G
Sbjct: 16  LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P++ +YN +I+G C+   ++ A ++L+ +  +GF+PD VTYN ++   C  G    A 
Sbjct: 76  MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +++R+   P+V+TYT LI +                  MCK   + +A +F   + 
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINS------------------MCKARNLNRAMEFFDQMR 177

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +P+  +Y  L+      G   E  +++ EM   G  P+VVTY+  I   C   + E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+ V++   EKGL PD  SY  +IS +C+ G LD A +    M+  G  PD V Y++++
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C+     +A ++ +++ D+G PP+  +Y T+ +A    GD  +AL +  EM+ KG  
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI---------------II 446
           PD +TY+ LI+ L +     EA  LL  +      P+ ++Y+                +I
Sbjct: 358 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALI 417

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            GFC    ++E+  V  +M E+  KP E  Y ++I G   GG   +A  L   ++
Sbjct: 418 KGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 472



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 197/406 (48%), Gaps = 18/406 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+V+ YN LI GFC   +++        +   G  P+VVTYN +I + C  G I+ AF +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +     +P +I+Y ++I     EG   +A ++L+EMG                   +
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY------------------K 109

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD ++YN LL      G + +   +  EM+  G+ P+VVTY+ LI+S+C+      A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           ++     + +GL P+  +Y  LI  + + G L+ A   L+ M   G  P +V YN  +  
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C     ++AL + +++ + G  P+V SY+T+ S     G+  RA  M  EM+ KG+ PD
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY+SLI  LC    + EA  L  +M      P   +Y  +I  +C    +N+++ +  
Sbjct: 290 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 349

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            M  KG  P+  TY +LI G+       EA  L   L+   ++  D
Sbjct: 350 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 18/337 (5%)

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           ++R    P V TY ILI+     G+  K +    EM                  E  GC 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM------------------ERNGCL 42

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++YN L+     MG+ +E   L+  M S+G++PN+++Y+++I+ LCR+G  ++A ++
Sbjct: 43  PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 102

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L     KG TPD  +Y+ L++ YCK+G    A+     M+ +G  P +V Y  ++ + CK
Sbjct: 103 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 162

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N ++A+E F+++   G  PN  +Y T+       G    A  +++EM   G  P  +T
Sbjct: 163 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 222

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+ I   C    ++EA+G++ +M      P V+SY+ II GFC+   ++ + ++   M 
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           EKG  P+  TY  LI+G+       EA +L+  ++ M
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 319



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 184/414 (44%), Gaps = 34/414 (8%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F   E  +  L+    + G F ++L     MV NG  P VV  T LI    + R  N+A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +   + +   G  P+   Y  LI GF +   +  A ++L+ +   GFSP VVTYN  I  
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C    +E A  V  +++     P V++Y+ +I                   G C+KG +
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS------------------GFCRKGEL 271

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AFQ  + +  +G  PD ++Y+ L++ L  M +  E   L  EM+  GL P+  TY+ L
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++ C +G    A+ +      KG  PDA +Y  LI+   K  R   A   L  +I +  
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391

Query: 331 LPDIVNYNT---------------ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           +P  V Y+T               ++  FC  G   +A  +FE + +    P  + YN +
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 451

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                  G+  +A  +  EM+  G  P  +T  +LI  L ++GM +E   ++ D
Sbjct: 452 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 247/510 (48%), Gaps = 23/510 (4%)

Query: 10  PKSNERVRVSSSAETRPN-THLLSFDVKETQFMKLIKRSFRAGKF---DESLYFIESMVA 65
           P     + + S      N  H +     +TQF+  ++   ++GK    DE+L F  +M  
Sbjct: 9   PSPALHIPLHSHCTKSTNINHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAK 68

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVFAYNALISGFCKANQIE 123
               P V+  T L+    + +    A+  V E+    G +PD F  N +I+  C    + 
Sbjct: 69  MNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVA 128

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
               VL  +   G  P VVT+ I+I  LC +G +  A ++ D + +   +  V TY +LI
Sbjct: 129 FGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLI 188

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
                 G+T +A+  L +M                 G+CK G+V +A      +  +G +
Sbjct: 189 NGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIK 248

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++++Y  L++ L N G+W+E   L+ EM+  G+ P++ + +IL+  LC++GK   A  V
Sbjct: 249 PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV 308

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +      G  PD ++Y+ LI  YC   ++D A    + M+S GCLPDIV Y +++  +CK
Sbjct: 309 IGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCK 368

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N ++A+ + +++  VG  P+V ++ T+       G  + A  +   M   G  P+  T
Sbjct: 369 IKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQT 428

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
              ++  LC+  ++ EA+ L   ME +     ++ Y+II+ G C   ++N ++E+ + + 
Sbjct: 429 CAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLP 488

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            KG + N   Y ++I G    G   +A +L
Sbjct: 489 AKGLQINVYAYTIMINGFAKQGLLDKAEDL 518



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 201/483 (41%), Gaps = 62/483 (12%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
            + SS   +P+T +L+  +     +KL+   F           + +M+  G +P VV  T
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSV---------LGTMLKLGLEPSVVTFT 150

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI     +    +AV +++ +EK G   DV  Y  LI+G CK  +   A   L ++  R
Sbjct: 151 ILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEER 210

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
            ++P+VV Y+ ++  LC  G++  A  +  ++     KP ++TYT LIQ     G+  +A
Sbjct: 211 NWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEA 270

Query: 196 MKLLDEMG-----------------MCKKGMVGQAFQFV--------------------- 217
             LLDEM                  +CK+G + QA   +                     
Sbjct: 271 GSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDR 330

Query: 218 -----------RSLE---SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
                      R  E   SRGC PD+++Y  L+     +    +   L+ EMI  G  P+
Sbjct: 331 YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD 390

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           VVT++ LI   C+ G+   A ++     + G  P+  +   ++   CK   L  A+    
Sbjct: 391 VVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFH 450

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M       +IV Y+ IL   C  G  + ALE+F  L   G   NV +Y  M +     G
Sbjct: 451 AMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQG 510

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A  ++S M   G  PD  TYN  +  L  +  +  ++  L  M    F     +  
Sbjct: 511 LLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTE 570

Query: 444 III 446
           +II
Sbjct: 571 MII 573



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 6/234 (2%)

Query: 275 CRDGK---TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GC 330
           C+ GK    ++A++      +    P    +  L+    K      AI  +  M S  G 
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD    N ++ + C          +   +  +G  P+V ++  + + L   GD  RA+ 
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++  +   G   D  TY  LI+ LC+ G   EAVG L  ME   + P V+ Y+ ++ G C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSM 503
           K   ++E++ +   M  KG KPN  TY  LI+G+  +G W+ EA  L + ++ M
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK-EAGSLLDEMMKM 280


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 237/488 (48%), Gaps = 34/488 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI----------------KKFFQER 86
           +I   F+ G+ D++      M+  G  P++V    +I                ++ F + 
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +  +AVR+++ +   G +PDV  Y+ LI  +CK  +   A  + D +  RG +PD  TY 
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-- 203
            ++    ++G +     +   +++D        + ILI+A       DKAM    EM   
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQK 324

Query: 204 ---------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                          +CK G V  A      + S G  PD+I++  L+  L  +G+W++ 
Sbjct: 325 GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKV 384

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           EKL  EMI+RG+ PN +  + ++ SLC++G+  +A D        G+ PD  SY  LI  
Sbjct: 385 EKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           YC DG++D +I+ L  M+S G  PD V Y+ +L  +CKNG  D AL ++ ++      PN
Sbjct: 445 YCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPN 504

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +YN +   L+ +G  + A     +++  GI+    TYN ++  LC +  VDEA+ +  
Sbjct: 505 AITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ 564

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            + S  F+  V ++NI+I+G  K  RI ++  + +A+   G  P+   Y L+I+     G
Sbjct: 565 GLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG 624

Query: 489 WRAEAMEL 496
              E+ EL
Sbjct: 625 LLEESDEL 632



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 226/477 (47%), Gaps = 49/477 (10%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKAN------ 120
           C P+V+    +I   F+E + +KA  +  E+L +   P++  YN++I G CKA       
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 121 ----------QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
                     Q+E A ++L ++   G  PDVVTY+++I   C  G    A  +FD ++R 
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P   TY  L+                   G   KG +      +  +   G   +  
Sbjct: 255 GQNPDAYTYRTLLH------------------GYATKGALVDMHDLLALMIQDGIPLEDH 296

Query: 231 SYNMLLRTLLNMGKWEEGEKLMT---EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +N+L+R      K E  +K MT   EM  +G  PNVVTY+ +I  LC+ G+ EDAV   
Sbjct: 297 VFNILIRA---YAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHF 353

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY-MISDGCLPDIVNYNTILAAFCK 346
                +GL+PD  ++  LI   C  G     +E L + MI+ G  P+ +  NTI+ + CK
Sbjct: 354 SQMVSEGLSPDIITFTSLIHGLCTIGEWK-KVEKLSFEMINRGIHPNAIFLNTIMDSLCK 412

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G   +A + F+++  VG  P+V SY  +       G    ++ ++  M+S G+ PD +T
Sbjct: 413 EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVT 472

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y++L++  C++G VD+A+ L  +M S   +P  I+YNII+ G     R+  + E    + 
Sbjct: 473 YSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
           + G +    TY +++ G+    +  EA+ +   L S        F+   RTF ++ V
Sbjct: 533 DSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRS------KEFQLEVRTFNIMIV 583



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 205/434 (47%), Gaps = 34/434 (7%)

Query: 84  QERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           + R S  AV +M        P+V +YN +I+G  K  +++ A  +   +  +GF P++VT
Sbjct: 117 ESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVT 176

Query: 144 YNIMIGSLCS----------------RGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           YN +I  LC                 +G +E A ++  ++     +P V+TY++LI    
Sbjct: 177 YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDY-- 234

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                            CK G   +A     S+  RG  PD  +Y  LL      G   +
Sbjct: 235 ----------------YCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVD 278

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              L+  MI  G+      ++ILI +  ++   + A+      ++KG +P+  +Y  +I 
Sbjct: 279 MHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVID 338

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK GR++ A+     M+S+G  PDI+ + +++   C  G   +  ++  ++ + G  P
Sbjct: 339 ILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHP 398

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N    NT+  +L   G  + A     +++  G++PD ++Y  LI   C DG +DE++ LL
Sbjct: 399 NAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLL 458

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M S   RP  ++Y+ ++ G+CK  R+++++ +   MF K  KPN  TY +++ G+ + 
Sbjct: 459 GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHA 518

Query: 488 GWRAEAMELANALV 501
           G    A E    +V
Sbjct: 519 GRVVAAREFYMKIV 532



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 227/492 (46%), Gaps = 53/492 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++++ F  G+ +E++  ++ M   G +PDVV  + LI  + +  +  +A  + + + + G
Sbjct: 196 VLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 103 E-PDVFAYNALISGFC-KANQIELA---------------------------NKVLDR-- 131
           + PD + Y  L+ G+  K   +++                            N+ LD+  
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 132 -----LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                +R +GFSP+VVTY  +I  LC  G +E A   F Q++ +   P +IT+T LI   
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G+  K  KL  EM                  +CK+G V +A  F   +   G +PDV
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SY +L+      GK +E  KL+  M+S GL P+ VTYS L++  C++G+ +DA+ + R 
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K + P+A +Y+ ++      GR+  A EF   ++  G    I  YN +L   C+N  
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+AL +F+ L        V ++N M   L   G    A  + S +L  G+ PD I Y  
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I     +G+++E+  L + ME         + N I+    +   +  +   L  + EK 
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKE 675

Query: 470 CKPNETTYVLLI 481
                +T VLLI
Sbjct: 676 YSVEASTAVLLI 687



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 46/394 (11%)

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAF-------KVFDQLLRD---NCKPTVITYTILIQAT 186
            + D  T+ I+I   C+ G+++ A        +    ++ D   NC P V++Y ++I   
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN------------- 233
             EG+ DKA  L  EM       +GQ F            P++++YN             
Sbjct: 150 FKEGEVDKAYTLFHEM-------LGQGFP-----------PNIVTYNSVIDGLCKAQAMD 191

Query: 234 ---MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
               +L+ + + G+ EE  +L+ +M   GL+P+VVTYS+LI   C+ G+  +A ++  + 
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-LPDIVNYNTILAAFCKNGN 349
             +G  PDAY+Y  L+  Y   G L    + L  MI DG  L D V +N ++ A+ KN  
Sbjct: 252 VRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHV-FNILIRAYAKNET 310

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+  F ++   G  PNV +Y T+   L  +G    A+   S+M+S+G+ PD IT+ S
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  LC  G   +   L  +M +    P  I  N I+   CK  R+ E+ +    +   G
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            KP+  +Y +LI+G    G   E+++L   +VS+
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 18/367 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+   +    D+++     M   G  P+VV  T +I    +  +   AV     + 
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  + +LI G C   + +   K+   + +RG  P+ +  N ++ SLC  G + 
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A   FDQ++    KP V++YTILI    L+G+ D+++KLL  M                
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G V  A    R + S+  +P+ I+YN++L  L + G+     +   +++  G++
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             + TY+I++  LC +   ++A+ + +  + K    +  +++ +I    K GR+  A   
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              ++  G +PD + Y  ++ +  + G  +++ E+F  +   GC  N  + N +   L  
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLE 657

Query: 382 SGDKIRA 388
            GD  RA
Sbjct: 658 KGDVRRA 664


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 226/452 (50%), Gaps = 23/452 (5%)

Query: 42  KLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE- 99
           +L+K    A +  E++   I+ M   GC PDVV    L+K F  E+++ +A+ ++ ++  
Sbjct: 134 QLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 100 ---KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
              +   P+V +Y  +I+GF    Q++ A  +   +  RG  P+VVTY  +I  LC   +
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  VF Q++    KP   TY  LI   +  G+  + +++L+EM              
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-------------- 299

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                + G +PD  +Y  LL  L N G+  E       MI +G++PNV  Y ILI     
Sbjct: 300 ----SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT 355

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G   +  D+L    E GL+PD + ++ + +AY K   +D A+   + M   G  PD+VN
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  ++ A CK G  D A+  F ++ + G  PN+  +N++   L +     +A     EML
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           ++GI PD + +N+++  LC  G V +A  L+  ME    RP VISY  +I G C   RI+
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRID 535

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           E+ + L  M   G KP+E TY  L+ G    G
Sbjct: 536 EAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 238/514 (46%), Gaps = 53/514 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  +I   F  G+ D++      M+  G +P+VV  T +I    + +  ++A  V + ++
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  +PD   YN LI G+    + +   ++L+ + + G  PD  TY  ++  LC+ G   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A   FD ++R   KP V  Y ILI     +G   +   LL+ M                
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG------------------ 243
               KK M+ +A      ++ +G  PDV+++  L+  L  +G                  
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 244 -----------------KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
                            KWE+ ++   EM+++G+ P+VV ++ ++ +LC  G+   A  +
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +   +  G  PD  SY  LI  +C  GR+D A + LD M+S G  PD   YNT+L  +C+
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D A  +F ++   G  P V +Y+T+   L+++     A  +   M++ G + +   
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN +++ L ++  VDEA  L   + S  F+  + ++NI+I    K+ R  +++ + A + 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             G  P+  TY L+ E +   G+  E  +L +A+
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM 719



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 214/464 (46%), Gaps = 18/464 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+ +F +SM+  G KP+V +   LI  +  +   ++   ++ ++ + G  PD   +
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N + + + K   I+ A  + ++++ +G SPDVV +  +I +LC  G ++ A   F+Q++ 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           +   P +  +  L+       + +KA +   EM                  +C KG V +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  +E  G +PDVISY  L+     +G+ +E  K +  M+S GL+P+  TY+ L+ 
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             CR G+ +DA  V R     G+TP   +Y  ++       R   A E    MI+ G   
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +I  YN IL    KN   D+A ++F+ L        ++++N M  AL+ SG    A+ + 
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + + S G+ PD  TY  +   L  +G ++E   L   ME +   P     N ++      
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHR 741

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             I  +   L+ + EK      +T  +LI  +    +   A  L
Sbjct: 742 GDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 21/260 (8%)

Query: 30  LLSFDVK--ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +LS  +K  E  +  L+    RAG+ D++      M+ NG  P VV  + ++   F  R+
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 88  SNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            ++A  + + ++    + +++ YN +++G  K N ++ A K+   L S+ F  ++ T+NI
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           MIG+L   G  E A  +F  +      P V TY ++ +  + EG  ++   L   M    
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM---- 719

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                         E  G  P+    N L+R LL+ G        ++++  +       T
Sbjct: 720 --------------EKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAST 765

Query: 267 YSILISSLCRDGKTEDAVDV 286
            ++LIS L RD     A  +
Sbjct: 766 TAMLISLLSRDEYHHHATSL 785



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 11/161 (6%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALW-------SSGDKIRALGMISEMLSK---GI 400
           D AL++F+ L     P ++ ++N + +A+        S+ +    + + + M+ +    +
Sbjct: 31  DDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD  TY+ LI C CR G ++        +  + +R   I  N ++ G C  +R+ E+++
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 461 VLAA-MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +L   M E GC P+  +Y  L++G        EA+EL + +
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 227/428 (53%), Gaps = 33/428 (7%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G + +V    KL+ +  +E + +KA  V  E+++K  +PD F +  L+ G C++NQ+E A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            K+L R++  G  PD   YN +I           AFK   ++++++C PTV+TYT ++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                +T  A+KLLDEM                    +GC P++ +YN+++  L    K 
Sbjct: 122 LCKAERTRDAVKLLDEM------------------RDKGCSPNIYTYNVIVEGLCEERKL 163

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E +K++ EM  RG  P+VVTY+  I  LC+  + ++A   L       +TPD  SY  +
Sbjct: 164 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTV 220

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I+  CK G LD A   LD+M + GC PD+V Y++++  FCK G  ++A+ + + +  +GC
Sbjct: 221 INGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 280

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            PN+ +YN++  AL   G   +A  M+ EM  +G  PD ++YN+ I  LC+   V +A  
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340

Query: 426 LLVDMESTRFRPTVISYNIIIL----------GFCKTRRINESIEVLAAMF-EKGCKPNE 474
           +   M      P   SY+++I+          G CK  R +E+  + + +  EK C+P+ 
Sbjct: 341 VFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 400

Query: 475 TTYVLLIE 482
             Y ++++
Sbjct: 401 FFYNVMLD 408



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 237/496 (47%), Gaps = 35/496 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    +A  F ++  F+  MV N C P VV  T ++    +  ++  AV+++ E+ 
Sbjct: 80  YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMR 139

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+++ YN ++ G C+  +++ A K+L+ +  RG+ PDVVTYN  I  LC    ++
Sbjct: 140 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 199

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K    L R    P V++YT +I                   G+CK G +  A + + 
Sbjct: 200 EARKF---LARMPVTPDVVSYTTVIN------------------GLCKSGDLDSASRMLD 238

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + +RGC PDV++Y+ L+      G+ E    L+  M+  G  PN+V Y+ L+ +L R G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP------ 332
               A D+L   + +G TPD  SY+  I   CK  R+  A    D M+  GC P      
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 333 ----DIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIR 387
               DI+ Y  +L   CK G  D+A  +F K+ D   C P+V  YN M  +        +
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           AL +  +ML K    + +T+N L+  LC D  + +A  +L+ M    F P  ++Y  ++ 
Sbjct: 419 ALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVD 477

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
             CK  +   ++E+     + GC P+  TY  LI G+ +     EA  L   LV    + 
Sbjct: 478 AMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537

Query: 508 RD-TFKRLNRTFPLLD 522
            D T   L+R   LL+
Sbjct: 538 DDKTLGLLHRKLKLLN 553



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 203/403 (50%), Gaps = 30/403 (7%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+  +V TYN ++  L      + A  VF +++  +C+P   T+ IL++      Q +KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            KLL  M                 G  K    GQAF+F+  +    C P V++Y  ++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +  +  KL+ EM  +G  PN+ TY++++  LC + K ++A  +L     +G  PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+  I   CK  R+D A +FL  M      PD+V+Y T++   CK+G+ D A  + +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
            +S+ GC P+V +Y+++       G+  RA+G++  ML  G  P+ + YNSL+  L R G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + +A  +LV+ME   F P V+SYN  I G CK  R+ ++  V   M E+GC PN ++Y 
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 479 LLI----------EGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +LI          +G+  GG   EA  L + ++       D F
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 401



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 35/157 (22%)

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +G   NV +YN +   L       +A  +  EM+ K  +PD  T+  L+  LCR   +++
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 423 AVGL-----------------------------------LVDMESTRFRPTVISYNIIIL 447
           A  L                                   L +M      PTV++Y  I+ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G CK  R  +++++L  M +KGC PN  TY +++EG+
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 36/183 (19%)

Query: 49  RAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEK------ 100
           + G+FDE+      ++    C+PDV     ++    + R+ +KA+++  ++LEK      
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVV 435

Query: 101 ------YGE----------------------PDVFAYNALISGFCKANQIELANKVLDRL 132
                 +G                       PD   Y  L+   CK  +   A ++ +  
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
              G  PDVVTY+ +I  L    M E A+ +F +L+     P   T  +L +   L  + 
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKP 555

Query: 193 DKA 195
            KA
Sbjct: 556 RKA 558


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 244/492 (49%), Gaps = 26/492 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + G++ E+L  +  M A G  P+ +     I+   +  +  +AV V+  +E
Sbjct: 253 YNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQME 312

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV +Y+A I       Q E +  +LD +  RG +P+ + +N  I +    G  E
Sbjct: 313 SQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWE 372

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-------------- 204
            A ++  ++      P   ++   I A    G+  +A++LL EM                
Sbjct: 373 KAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432

Query: 205 --CKKGMVGQ---AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
             C KG  GQ   A +  R + ++G  P+VIS N+ +R     G+W+EG +L+ +M ++G
Sbjct: 433 EACGKG--GQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L PNV+TY+  I +  + G+ E A+D+L   KE  +TPD+ +Y+  I+A  K GR   A+
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M   G  PD+++Y   + A+ KNG  ++A+E+  ++   G  PNV +YN++  A 
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+  +AL ++ E+    + PD ++YN  IS   + G  +EA+ LL +M +    P V
Sbjct: 611 GRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDV 670

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM----E 495
           ISY   I          +++ +L  M   G  P  T+Y L IE  G GG R EA+    E
Sbjct: 671 ISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVRE 730

Query: 496 LANALVSMHAIS 507
           +A   +S   IS
Sbjct: 731 MAQRGLSHRNIS 742



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 19/411 (4%)

Query: 87  KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYN 145
           K  +A+ +++ +++ G     +Y   I+   +  Q E A ++L  +    G SP+V  YN
Sbjct: 125 KWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYN 184

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
             I +  S    E A  +  ++      P  I+Y   I+A    GQ ++ + LL EM   
Sbjct: 185 SAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREM--- 241

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                           S G  PD I+YN ++      G+W+E   ++TEM ++GL P  +
Sbjct: 242 ---------------PSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +Y++ I +  R G+ ++AV+VLR  + +G+TPD  SYD  I A    G+ + +++ LD M
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEM 346

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P+ +++N+ + A  K G  ++A+E+  +++ +G  P+ +S+N+  +A   SG  
Sbjct: 347 AGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRW 406

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             AL ++ EM +K ++PD I+YNS I    + G  + A+ L   M +    P VIS NI 
Sbjct: 407 KEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIA 466

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I    +  R  E +E+L  M  +G  PN  TY   I+  G GG   +A++L
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDL 517



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 222/499 (44%), Gaps = 64/499 (12%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC----TKLIKKFFQERKSNKAVRV 94
           +    ++ +   GK+ E+L  ++ M   G     V+C    T  I    ++ +  KA+ +
Sbjct: 112 KLQAALREAATTGKWREALGILDEMKEGG-----VVCAHSYTTAITTCGRQGQWEKALEL 166

Query: 95  M-EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           + EI E+ G  P+VF YN+ I      +Q E+A  +L  +  R   PD ++YN  I +  
Sbjct: 167 LREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACG 226

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
             G  E    +  ++      P  ITY  +I     EGQ  +A+ +L EM          
Sbjct: 227 RGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM---------- 276

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK---------------------- 250
                    ++G  P+ ISYNM +R     G+W+E  +                      
Sbjct: 277 --------SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIK 328

Query: 251 -------------LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                        L+ EM  RG+ PN + ++  I +  + G+ E AV++LR     GLTP
Sbjct: 329 ACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTP 388

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           DA S++  I+A  K GR   A+E L  M +    PD ++YN+ + A  K G  + ALE+ 
Sbjct: 389 DATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELR 448

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++   G  PNV S N    A    G     L ++ +M ++G+ P+ ITYNS I    + 
Sbjct: 449 RQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKG 508

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  ++A+ LL  M+     P  I+YN  I    K  R  E++ +L  M  +G  P+  +Y
Sbjct: 509 GQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISY 568

Query: 478 VLLIEGIGYGGWRAEAMEL 496
              I+  G  G    A+EL
Sbjct: 569 TAAIDAYGKNGQWERAVEL 587



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 19/391 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
            F   I    + G++++++  +  + A G  PD       I    +  +  +A+ ++ E+
Sbjct: 357 HFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEM 416

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             K  +PD  +YN+ I    K  Q E+A ++  ++ ++G +P+V++ NI I +   RG  
Sbjct: 417 PAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRW 476

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +   ++  Q+      P VITY   I+     GQ +KA+ LL +M               
Sbjct: 477 QEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSA 536

Query: 203 -GMC-KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              C K+G   +A   +R +  +G  PDVISY   +      G+WE   +L+ +M ++GL
Sbjct: 537 IAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGL 596

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNV+TY+ +I +  R G+ E A+D+L+  KE  + PD  SY+  ISA  K GR + A++
Sbjct: 597 TPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALD 656

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M ++G  PD+++Y + + A    G  ++AL +   +   G  P  +SY+    A  
Sbjct: 657 LLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACG 716

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
             G +  A+ ++ EM  +G+    I+ NSLI
Sbjct: 717 KGGRREEAVCLVREMAQRGLSHRNIS-NSLI 746



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 18/282 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G++ E L  +  M A G  P+V+     IK   +  +  KA+ ++  +++    PD   Y
Sbjct: 474 GRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITY 533

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+ I+   K  + + A  +L  +  +G +PDV++Y   I +    G  E A ++  Q+  
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPT 593

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMVGQ 212
               P VITY  +I+A    G+ +KA+ LL E+                  C K+G   +
Sbjct: 594 KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEE 653

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +R + + G  PDVISY   +R     G+WE+   L+  M + G+ P   +YS+ I 
Sbjct: 654 ALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIE 713

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           +  + G+ E+AV ++R   ++GL+    S   ++ A   D +
Sbjct: 714 ACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDAK 755


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 229/438 (52%), Gaps = 19/438 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +AG+F ++L   + MVA GC+PDV   T +I    +  ++  A  +++ + 
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMG 223

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +PDV  Y+ LI   CK   +  A  +   ++++G SP VV+Y  +I  LCS    +
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + +++   N  P ++T+++LI                     CK+G V +A   ++
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDI------------------FCKEGNVLEAQGVLK 325

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   G +P+VI+YN L+       +  E  KL   MI+RG +P+V +YSILI+  C   
Sbjct: 326 TMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVK 385

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +      +GLTP+  SY  LI A+C+ G+L  A E    M ++G LPD+  Y+
Sbjct: 386 RIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FCK G   +A  +F  +      PN+  Y  +  ++  SG+   A  + SE+   
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD   Y ++I+ LC++G++DEA+     ME     P   SYN+II GF + +  + +
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565

Query: 459 IEVLAAMFEKGCKPNETT 476
           ++++  M +KG   +E T
Sbjct: 566 VQLIGEMRDKGFVADEGT 583



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 230/468 (49%), Gaps = 21/468 (4%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYG-EP 104
           SFR    D++L     M+     P ++   KL+    + R+   AV  + + +E  G  P
Sbjct: 67  SFR--NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSP 124

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +    N LI+ FC    ++L   VL ++   G  P ++T+  +I  LC  G    A ++F
Sbjct: 125 NTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELF 184

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKK 207
           D ++   C+P V TYT +I      G+T  A  L+ +MG                 +CK 
Sbjct: 185 DDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            +V +A      ++++G  P V+SY  L++ L +  +W+E   ++ EM S  + P++VT+
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTF 304

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S+LI   C++G   +A  VL+   E G+ P+  +Y+ L+  Y     +  A +  D MI+
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC PD+ +Y+ ++  +C     D+A ++F ++   G  PN  SY T+  A    G    
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  +  +M + G  PD  TY+ L+   C+ G + +A  L   M+ T  +P ++ Y I+I 
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
             CK+  +N + ++ + +F  G +P+   Y  +I G+   G   EA+E
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 201/406 (49%), Gaps = 19/406 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSR 154
            +L +   P +  +N L+S   +  Q   A   L + +   G SP+  T NI+I   C  
Sbjct: 80  HMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLM 139

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++  F V  ++++   +PT+IT+T LI                   G+CK G   QA 
Sbjct: 140 QHVDLGFSVLAKVIKLGLQPTIITFTTLIN------------------GLCKAGEFAQAL 181

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    + +RGCQPDV +Y  ++  L  MG+      L+ +M   G +P+VVTYS LI SL
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+D    +A+D+    K KG++P   SY  LI   C   R   A   L+ M S   +PDI
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V ++ ++  FCK GN  +A  + + ++++G  PNV +YN++        + + A  +   
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDV 361

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+++G +PD  +Y+ LI+  C    +DEA  L  +M      P  +SY  +I  FC+  +
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + E+ E+   M   G  P+  TY +L+EG    G+  +A  L  A+
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 1/277 (0%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGE-KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           P +I +N LL  ++ M ++ +    L  +M   GL PN  T +ILI+  C     +    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL    + GL P   ++  LI+  CK G    A+E  D M++ GC PD+  Y TI+   C
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G    A  + +K+ +VGC P+V +Y+T+  +L        AL + S M +KGI P  +
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           +Y SLI  LC      EA  +L +M S    P +++++++I  FCK   + E+  VL  M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E G +PN  TY  L+ G        EA +L + +++
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKD 312
            M+ R   P ++ ++ L+S++ R  +  DAV  L    E  GL+P+  + + LI+ +C  
Sbjct: 80  HMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLM 139

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
             +DL    L  +I  G  P I+ + T++   CK G   QALE+F+ +   GC P+V +Y
Sbjct: 140 QHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTY 199

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
            T+ + L   G+   A G+I +M   G +PD +TY++LI  LC+D +V+EA+ +   M++
Sbjct: 200 TTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKA 259

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               PTV+SY  +I G C   R  E+  +L  M      P+  T+ LLI+     G   E
Sbjct: 260 KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLE 319

Query: 493 AMELANALVSM 503
           A  +   +  M
Sbjct: 320 AQGVLKTMTEM 330



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 3/226 (1%)

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL-DLAIEFLDYMISDGCLPDIVNYNT 339
           +DA+        +   P    ++ L+SA  +  +  D  I     M   G  P+    N 
Sbjct: 72  DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  FC   + D    +  K+  +G  P + ++ T+ + L  +G+  +AL +  +M+++G
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            +PD  TY ++I+ LC+ G    A GL+  M     +P V++Y+ +I   CK R +NE++
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMH 504
           ++ + M  KG  P   +Y  LI+G+  +  W+ EA  + N + S++
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK-EASAMLNEMTSLN 296


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 236/468 (50%), Gaps = 20/468 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  +++     G  D ++   E MV  GC    V    L+  F +E +  +A+R +E
Sbjct: 230 EKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIE 289

Query: 97  --ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
              L +   PD + +N L++G  K   ++ A +V+D +   GF PD+ TYN +I  LC  
Sbjct: 290 EMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKL 349

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G ++ A KV +Q++  +C P  +TY  +I     E Q ++A KL   +            
Sbjct: 350 GEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTY 409

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A +  + ++++GC PD  +YNML+ +L   GK +E   L+ EM  
Sbjct: 410 NSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEV 469

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G   NV+TY+ LI   C++ +  +A ++    + +G++ ++ +Y+ LI   CK  R++ 
Sbjct: 470 SGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEE 529

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A + +D MI +G  PD   YN++L  FCK G+  +A +I + ++  GC P++ +Y T+ +
Sbjct: 530 ASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIA 589

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G    A  ++  +  KGI      YN +I  L R     EAV L  +M      P
Sbjct: 590 GLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAP 649

Query: 438 TVISYNIIILGFCKTR-RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             ++Y I+  G C+    I E+++ +  M E+G  P  +++ +L EG+
Sbjct: 650 DAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 234/466 (50%), Gaps = 20/466 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  LIK   RA +   ++  +E M   G  PD    T +++ F +E   + A+RV E 
Sbjct: 196 STFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQ 255

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRG 155
           + + G        N L++GFCK  +IE A + ++ +  R GF PD  T+N+++  L   G
Sbjct: 256 MVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTG 315

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            ++ A +V D +LR+   P + TY  LI                   G+CK G V +A +
Sbjct: 316 HVKHALEVMDMMLREGFDPDIYTYNSLIS------------------GLCKLGEVDEAVK 357

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R C P+ ++YN ++ TL    + EE  KL   +  +G+ P+V TY+ LI  LC
Sbjct: 358 VLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLC 417

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
                  A+++ +  K KG  PD ++Y+ LI + C  G+L  A+  L  M   GC  +++
Sbjct: 418 LSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVI 477

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++  FCKN    +A EIF+++   G   N  +YNT+   L  S     A  ++ +M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + +G+ PD+ TYNSL++  C+ G + +A  ++  M S    P +++Y  +I G CK  R+
Sbjct: 538 IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             + ++L  +  KG       Y  +I+ +       EA+ L   ++
Sbjct: 598 EAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 250/501 (49%), Gaps = 25/501 (4%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A  +PN     F    + F +++ +  +AG+FD     ++ M  +    D       I+ 
Sbjct: 79  ASKQPN-----FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIES 133

Query: 82  FFQERKSNKAVRVMEILE-KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           +      N+ ++ ++ +E ++G   +   YN L++     N+++L       + SRG  P
Sbjct: 134 YASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRP 193

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DV T+NI+I +LC    I  A  + +++      P   T+T ++Q  + EG  D AM++ 
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVK 253

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESR-GCQPDVISYNMLLRTLLN 241
           ++M                 G CK+G + +A +F+  +  R G  PD  ++NML+  L  
Sbjct: 254 EQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSK 313

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G  +   ++M  M+  G +P++ TY+ LIS LC+ G+ ++AV VL    E+  +P+  +
Sbjct: 314 TGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVT 373

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ +IS  CK+ +++ A +    +   G LPD+  YN+++   C + N   A+E+++++ 
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             GC P+  +YN +  +L   G    AL ++ EM   G   + ITYN+LI   C++  + 
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  +   ME        ++YN +I G CK+ R+ E+ +++  M  +G +P++ TY  L+
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553

Query: 482 EGIGYGGWRAEAMELANALVS 502
                 G   +A ++   + S
Sbjct: 554 TYFCKAGDIKKAADIVQTMAS 574



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 59/295 (20%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG----- 102
           FR GK  E+L  ++ M  +GC  +V+    LI  F + ++  +A  + + +E  G     
Sbjct: 453 FR-GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511

Query: 103 -------------------------------EPDVFAYNALISGFCKANQIELANKVLDR 131
                                           PD F YN+L++ FCKA  I+ A  ++  
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT 571

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + S G  PD+VTY  +I  LC  G +E+A K+   +       T   Y  +IQA     +
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKR 631

Query: 192 TDKAMKLLDEM-----------------GMCKKG-MVGQAFQFVRSLESRGCQPDVISYN 233
           + +A++L  EM                 G+C+ G  +G+A  FV  +  RG  P+  S+ 
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ML   L ++       KL+  ++ +     N VT   +I    +  K +DA+  L
Sbjct: 692 MLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT---MIRGFLKISKYQDALATL 743


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 219/415 (52%), Gaps = 21/415 (5%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +++K  +PD F +  L+ G C++NQ+E A ++L R++  G  PD   YN +I        
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              AFK   ++++++C PTV+TYT ++      G+T  A+KLLDEM              
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM-------------- 106

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 +GC P++ +YN+++  L    K +E +K++ EM  RG  P+VVTY+  I  LC+
Sbjct: 107 ----RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 162

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + ++A   L       +TPD  SY  +I+  CK G LD A   LD M + GC PD+V 
Sbjct: 163 CDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVT 219

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y++++  FCK G  ++A+ + + +  +GC PN+ +YN++  AL   G   +A  M+ EM 
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +G  PD ++YN+ I  LC+   V +A  +   M      P   SY++++   CK + ++
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++I ++    EK    +   Y +L++G+  GG   EA  L + ++       D F
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 235/477 (49%), Gaps = 23/477 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    +A  F ++  F+  MV N C P VV  T ++    +  ++  AV+++ E+ +K 
Sbjct: 51  LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG 110

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+++ YN ++ G C+  +++ A K+L+ +  RG+ PDVVTYN  I  LC    ++ A 
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 170

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K    L R    P V++YT +I      G  D A ++LD+M                 G 
Sbjct: 171 KF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G V +A   + S+   GC+P++++YN LL  L  +G   + E ++ EM  RG  P+V
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 287

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+Y+  I  LC+  + + A  V     E+G TP+A SY  L+   CK   LD AI  ++ 
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSG 383
                 + DI+ Y  +L   CK G  D+A  +F K+ D   C P+V  YN M  +     
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +AL +  +ML +    + +T+N L+  LC D  + +A  +L+ M    F P  ++Y 
Sbjct: 408 QIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++   CK  +   ++E+     + GC P+  TY  LI G+ +     EA  L   L
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 252/535 (47%), Gaps = 67/535 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AG+  +++  ++ M   GC P++     +++   +ERK ++A +++E +   G  PDV 
Sbjct: 92  KAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 151

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+ I G CK ++++ A K L R+     +PDVV+Y  +I  LC  G ++SA ++ DQ+
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P V+TY+ LI      G+ ++AM LLD M                  + + G +
Sbjct: 209 TNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 268

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+A   +  +E RG  PDV+SYN  +  L    + ++ + +   M+ RG  PN  +YS+L
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG- 329
           +  LC+  + +DA+ ++  A+EK    D   Y  L+   CK GR D A      ++ +  
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIF------------------------EKLSDV-- 363
           C PD+  YN +L + CK    D+AL+I                         ++LSD   
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAET 448

Query: 364 --------GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
                   G  P+  +Y T+  A+   G    AL +  E +  G  PD +TY++LI+ L 
Sbjct: 449 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
            + M +EA  L   ++       V  +N +ILG+ +    +  +++   + E   +PN  
Sbjct: 509 HENMAEEAYLLFTKLD-------VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHL 530
           T+   I G      +AE++  A  L    A+    F  L     L+DV+ +   L
Sbjct: 562 TFGKEISG---KLVKAESLGKARGLFD-RAVKGGFFPDLFVANTLIDVFAKCGDL 612



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 28/437 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G  D +   ++ M   GC PDVV  + LI  F +  +  +A+ +++ + K G  P++ 
Sbjct: 194 KSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN+L+    +   I  A  +L  +  RGF+PDVV+YN  I  LC    ++ A  VFD++
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +   C P   +Y++L++    + + D A+ L+++                  G+CK G  
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRF 373

Query: 211 GQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
            +A   F + L+ + C+PDV  YN++L +     + ++  ++  +M+ R    NVVT++I
Sbjct: 374 DEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNI 432

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+  LC D +  DA  +L    ++G  PD  +Y  L+ A CK G+   A+E  +  +  G
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 492

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C+PD+V Y+ ++        A++A  +F KL       +V+ +N M      +G     L
Sbjct: 493 CVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGL 545

Query: 390 GMISEMLSKGIEPDEITYNSLISC-LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
            +  E++   +EP+  T+   IS  L +   + +A GL        F P +   N +I  
Sbjct: 546 KLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDV 605

Query: 449 FCKTRRINESIEVLAAM 465
           F K   + E+  +  +M
Sbjct: 606 FAKCGDLEEARRIFYSM 622


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 248/489 (50%), Gaps = 21/489 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V    +  ++    + G  + +  F+  ++  G   D  + T L+  F +      A+
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL 250

Query: 93  RVMEILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +V +++ K     P+  +Y+ LI G C+  ++E A  + D++  +G  P   TY ++I +
Sbjct: 251 KVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC RG+I+ AF +FD+++   CKP V TYT+LI     +G+ ++A  +  +M        
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G CK G V  AF+ +  +E R C+P+V ++N L+  L  +GK  +   L+ 
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            M+  GL P++V+Y++LI  LCR+G    A  +L +     + PD  ++  +I+A+CK G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           + D+A  FL  M+  G   D V   T++   CK G    AL I E L  +       S N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550

Query: 374 TMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
            +   L S G K++  L M+ ++   G+ P  +TY +L+  L R G +  +  +L  M+ 
Sbjct: 551 VILDML-SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           +   P V  Y III G C+  R+ E+ ++L+AM + G  PN  TY ++++G    G    
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 493 AMELANALV 501
           A+E   A+V
Sbjct: 670 ALETVRAMV 678



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 19/400 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y++L+    K +   LA     R+ + GF   ++ Y  ++ +LC  G  E+A     ++L
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR-GCQP 227
           +                 +L+     ++ L    G C+   +  A +    +     C P
Sbjct: 223 K--------------IGFVLDSHIGTSLLL----GFCRGLNLRDALKVFDVMSKEVTCAP 264

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +SY++L+  L  +G+ EE   L  +M  +G +P+  TY++LI +LC  G  + A ++ 
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G  P+ ++Y  LI   C+DG+++ A      M+ D   P ++ YN ++  +CK+
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A E+   +    C PNV ++N +   L   G   +A+ ++  ML  G+ PD ++Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LCR+G ++ A  LL  M      P  +++  II  FCK  + + +   L  M  
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           KG   +E T   LI+G+   G   +A+ +   LV M  ++
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/571 (22%), Positives = 236/571 (41%), Gaps = 109/571 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI      G+ +E+    + M   GC+P     T LIK        +KA  +  E++ + 
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y  LI G C+  +IE AN V  ++      P V+TYN +I   C  G +  AF
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++   + +  CKP V T+  L++     G+  KA+ LL  M                 G+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C++G +  A++ + S+     +PD +++  ++      GK +     +  M+ +G+  + 
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511

Query: 265 VTYSILISSLCRDGKTEDAVDVLRA-------------------------AKEK------ 293
           VT + LI  +C+ GKT DA+ +L                            KE+      
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571

Query: 294 ----GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               GL P   +Y  L+    + G +  +   L+ M   GCLP++  Y  I+   C+ G 
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A ++   + D G  PN  +Y  M     ++G   RAL  +  M+ +G E ++  Y+S
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691

Query: 410 L-----------------------------------------------------ISCLCR 416
           L                                                     ++ LC+
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCK 751

Query: 417 DGMVDEAVGLLVD-MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +G  DE+  L+ + +E   F    +  +II+  +C  ++  + +E++  + + G  P+  
Sbjct: 752 EGRTDESNDLVQNVLERGVFLEKAM--DIIMESYCSKKKHTKCMELITLVLKSGFVPSFK 809

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           ++ L+I+G+   G    A EL   L++ + +
Sbjct: 810 SFCLVIQGLKKEGDAERARELVMELLTSNGV 840



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 192/473 (40%), Gaps = 76/473 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L++   R GK  ++++ ++ M+ NG  PD+V    LI    +E   N A +++  + 
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  EPD   + A+I+ FCK  + ++A+  L  +  +G S D VT   +I  +C  G   
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528

Query: 159 SAFKVFDQL------------------LRDNCK-----------------PTVITYTILI 183
            A  + + L                  L   CK                 P+V+TYT L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
              +  G    + ++L+ M                 G+C+ G V +A + + +++  G  
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+ ++Y ++++  +N GK +   + +  M+ RG E N   YS L+       K  D  + 
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708

Query: 287 LRAAKEKGLTPDAYSYDPLISA------------------YCKDGRLDLAIEFLDYMISD 328
              +       D    + LIS                    CK+GR D + + +  ++  
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G   +    + I+ ++C      + +E+   +   G  P+  S+  +   L   GD  RA
Sbjct: 769 GVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRD---GMVDEAVGLLVDMESTRFRPT 438
             ++ E+L+     ++    + + CL      G   E +  LVD    R RPT
Sbjct: 828 RELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVID-LVDQLHCRERPT 879


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 231/480 (48%), Gaps = 30/480 (6%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           V+     RPNT            +KLI    R  K  ++        +  C P V   TK
Sbjct: 22  VAEGRPLRPNT-----------LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI       +  +A  V + L + G + D FAYN LI  F ++ Q++ A ++   ++ +G
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PD  TY  ++ +L   G ++ A   FD +L     P + TY +L+ A    GQ D A+
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            L  EM                  + RG QP V++YN+LL  L + G+     KL  +M 
Sbjct: 191 GLFAEM------------------KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+  TYS L++ L + G+ E+A  V R   ++G+  D  +Y+ L++   K G +D
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
              + +  M   G  PD  ++NTI+ A  K    D A E+F ++ + GC P++ SYN + 
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            +    GD  +A  M+ EM+  G  P+  TYNSLI  L  DG VDEA  +L +ME+   R
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCR 412

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V++YN ++    K      +  +   M +KG +P+  +Y + I+G+ +     EA+ L
Sbjct: 413 PDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVL 472



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 225/450 (50%), Gaps = 19/450 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F KLI     +G+F+ +    + +V  GC+ D      LI+ F +  + + A+ +  E+ 
Sbjct: 68  FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K  EPD + Y  L++   KA +++ A    D +  RG +P++ TYN+++ +    G ++
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F ++ R   +P+V+TY IL+ A                  +C  G VG A +   
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDA------------------LCSAGRVGAARKLFH 229

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC PD  +Y+ L+  L   G+ EE  K+  EM+ RG+  ++V Y+ L+++L + G
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +    +++    KG  PDA+S++ ++ A  K  + D A E    M+  GC PD+++YN
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++ ++ + G+A QA ++ E++ + G  P   +YN++   L + G    A  ++ EM + 
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TYN L+  L + G    A  L   M+     P  +SY + I G     R++E+
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           + +   M   GC  ++  Y +LI      G
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 175/342 (51%), Gaps = 18/342 (5%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           AF +F+Q     C PTV  +T LI   +  G+ ++A  +                   + 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELV------------------YKK 90

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L  +GCQ D  +YN+L+R     G+ +   ++  EM  +G EP+  TY  L+++L + G+
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++A     A  E+GLTP+  +Y+ L+ A+ K G+LD+A+     M   G  P +V YN 
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L A C  G    A ++F K++  GC P+  +Y+T+ + L  SG    A  +  EM+ +G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +  D + YNSL++ L + G +D    L+ +M    F P   S+N I+    K  + + + 
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           EV A M E GCKP+  +Y +LI+     G  A+A ++   +V
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 175/402 (43%), Gaps = 67/402 (16%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME------ 96
           LI+   R+G+ D ++     M   G +PD      L+          KA RV E      
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL------GKAGRVQEARSFFD 159

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +LE+   P++  YN L+  F K  Q+++A  +   ++ RGF P VVTYNI++ +LCS G
Sbjct: 160 AMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            + +A K+F ++  D C P   TY+ L+      G+ ++A K+  EM             
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279

Query: 203 --------------------GMCKKGMVGQAFQF--------------------VRSLES 222
                                M +KG    AF F                     R +ES
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC+PD+ISYN+L+ +    G   +  +++ EM+  G  P   TY+ LI  L  DG+ ++
Sbjct: 340 -GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VL   +  G  PD  +Y+ L+    K G    A      M   G  PD ++Y   + 
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
               +   D+AL +F+ +  VGCP + + Y  +  A   +GD
Sbjct: 459 GLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 4/269 (1%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRG--LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           +L  L + G  +  E L+ EM++ G  L PN  T   LI++  R  K+ DA D+   A+ 
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAES 58

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
              +P  +++  LI      G  + A      ++  GC  D   YN ++  F ++G  D 
Sbjct: 59  FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+E+F ++   G  P+  +Y  + +AL  +G    A      ML +G+ P+  TYN L+ 
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
              + G +D A+GL  +M+   F+P+V++YNI++   C   R+  + ++   M   GC P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  TY  L+ G+G  G   EA ++   +V
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMV 267



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 144/290 (49%), Gaps = 18/290 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           AG+   +      M  +GC PD    + L+    +  +  +A +V  E++++    D+  
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+L++   KA  ++   K++  +  +GF PD  ++N ++ +L      ++A +VF +++
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
              CKP +I+Y ILI +    G   +A ++L+EM                  +   G V 
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVD 397

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +AF  +  +E+ GC+PDV++YN L+  L   G+ +   +L  +M  +G+EP+ ++Y++ I
Sbjct: 398 EAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRI 457

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             L  D + ++A+ + +  K  G   D   Y  LI A  + G  +L  + 
Sbjct: 458 DGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 18/224 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG  D     ++ M   G  PD      ++    +  K + A  V   + + G +PD+ 
Sbjct: 287 KAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLI 346

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI  + +      A ++L+ +   GF P+  TYN +I  L + G ++ AF V +++
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C+P V+TY  L+      G+  +A +L  +M                 G+     +
Sbjct: 407 ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRL 466

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
            +A    + +++ GC  D   Y +L+R     G  E   +L  E
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 1/160 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    R G   ++   +E MV  G  P+      LI     + + ++A  V+E +E  G
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAG 410

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV  YN L+    K  + + A ++  +++ +G  PD ++Y + I  L     ++ A 
Sbjct: 411 CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEAL 470

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            +F  +    C      Y ILI+A    G T+   +L  E
Sbjct: 471 VLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 239/481 (49%), Gaps = 19/481 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG  DE+L    SM   G  PD  +   LI  F ++++S +   +++ +   G +PD  
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY ALI+GF K + I  A +V + + +R    +  TY  +I  LC  G +E A  +F ++
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                KP + TY  LI+        +KA +LL E+                 G+C  G +
Sbjct: 399 TMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDL 458

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +  + + S G +P+++ Y  +++ L+  G++EE  K++  M  +GL P+V  Y+ +
Sbjct: 459 TRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTV 518

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ GK E+    L     KGL P+ Y+Y   I  YC+ G +  A      M+  G 
Sbjct: 519 IIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V    ++  +CK+GN  +A   F  + D G  P+V +++ +   L  +G    A+G
Sbjct: 579 APNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + SE+L KG+ PD  TY SLIS LC++G +  A  L  DM      P +++YN +I G C
Sbjct: 639 VFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLC 698

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I ++ E+   + EKG   N  TY  +I G        EA +L + +  +  +  D+
Sbjct: 699 KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM-KLVGVPPDS 757

Query: 511 F 511
           F
Sbjct: 758 F 758



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 250/519 (48%), Gaps = 63/519 (12%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
             + M++ G KP++V+ T ++K   +E +  +A++++ +++  G  PDVF YN +I GFC
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           KA ++E     L  + ++G  P+V TY   I   C  G +++A + F ++L     P  +
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
             T LI                   G CK G   +AF   R +  +G  PDV ++++L+ 
Sbjct: 584 ICTDLID------------------GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIH 625

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L   GK +E   + +E++ +GL P+V TY+ LIS+LC++G  + A ++     +KG+ P
Sbjct: 626 GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINP 685

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI+  CK G +  A E  D +   G   + V Y+TI+A +CK+ N  +A ++F
Sbjct: 686 NIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF 745

Query: 358 EKLSDVGCPPN----------------------------------VSSYNTMFSALWSSG 383
             +  VG PP+                                    ++N +    +  G
Sbjct: 746 HGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLG 805

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
             I A  ++ +M+   I P+ +TY  LI   C  G + EA  L ++M+     P V++Y 
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYT 865

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG-IGYGGWRAEAMELANALVS 502
            ++ G+ +  R +E   +   M  +G KP++  + ++++  +  G W  +A++L + ++S
Sbjct: 866 SLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW-IKALKLVDDMLS 924

Query: 503 --------MHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
                   ++ I  D   + N    +L V  E+    +K
Sbjct: 925 EGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSK 963



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 198/415 (47%), Gaps = 17/415 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV+ Y  LI+ +C+  ++E    VL  +  +G  P++VTY+++I  LC  G ++ A ++
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +      P    Y  LI     + ++ +   +LDEM                 G  K
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +  +G AFQ    + +R  + +  +Y  L+  L  +G  E+ E L +EM   G++P++ T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI    +    E A ++L   K++ LT +AY    +++  C  G L  A E    MI
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S G  P+IV Y TI+    K G  ++A++I   + D G  P+V  YNT+      +G   
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
                + EM++KG++P+  TY + I   CR G +  A    ++M  +   P  +    +I
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            G+CK     ++      M ++G  P+  T+ +LI G+   G   EAM + + L+
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 19/379 (5%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+L     K N++EL  KV   +      PDV TY  +I + C  G +E    V   +  
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEE 260

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P ++TY+++I                   G+C+ G V +A +  RS+ ++G  PD 
Sbjct: 261 KGCIPNLVTYSVVIA------------------GLCRAGDVDEALELKRSMANKGLLPDN 302

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
             Y  L+       +  EG+ ++ EM + GL+P+ V Y+ LI+   +      A  V   
Sbjct: 303 YIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEE 362

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              + +  + ++Y  LI   CK G L+ A +    M   G  PDI  YN ++  + K  N
Sbjct: 363 MFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQN 422

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A E+  ++       N      + + L   GD  RA  +  EM+S G++P+ + Y +
Sbjct: 423 MEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           ++  L ++G  +EA+ +L  M+     P V  YN +I+GFCK  ++ E    L  M  KG
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542

Query: 470 CKPNETTYVLLIEGIGYGG 488
            KPN  TY   I G    G
Sbjct: 543 LKPNVYTYGAFIHGYCRAG 561



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 190/434 (43%), Gaps = 52/434 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVF 107
           RAG+   +      M+ +G  P+ V+CT LI  + ++  + KA  +   +L++   PDV 
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            ++ LI G  K  +++ A  V   L  +G  PDV TY  +I +LC  G +++AF++ D +
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +    P ++TY  LI      G+  KA +L D +                 G CK   +
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL 738

Query: 211 GQAFQFVRSLESRGCQPDVISY----------------------------------NMLL 236
            +AFQ    ++  G  PD   Y                                  N L+
Sbjct: 739 TEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALI 798

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                +GK  E  +L+ +M+   + PN VTY+ILI   C  G  ++A  +    +++ + 
Sbjct: 799 DGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVM 858

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  L+  Y + GR        D M++ G  PD + ++ ++ A  K GN  +AL++
Sbjct: 859 PNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKL 918

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            + +   G     + Y  +  AL    +    L ++ E+  +G +    T  +L+ C  R
Sbjct: 919 VDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHR 978

Query: 417 DGMVDEAVGLLVDM 430
            G  DEA+ +L  M
Sbjct: 979 AGRTDEALRVLESM 992



 Score = 45.1 bits (105), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 3/132 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    R G+  E     + MVA G KPD +  + ++    +E    KA+++++ + 
Sbjct: 864 YTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDML 923

Query: 100 KYGEPDVFA--YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             G  +V    Y  LI   CK N +    KVLD +  +G    + T   ++      G  
Sbjct: 924 SEG-VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRT 982

Query: 158 ESAFKVFDQLLR 169
           + A +V + ++R
Sbjct: 983 DEALRVLESMVR 994


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 243/490 (49%), Gaps = 16/490 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GKFD++   I+ M+  G  PD    +K+I    +  K  KA  + + ++  G  PDV+ Y
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCK   IE A    D + S G SP VVTY  ++ +      +  A  +F +++ 
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P  ITY+ L+      G++ KA ++  +M +     VG  F F     +    P+V
Sbjct: 554 AGCAPNTITYSALVDGLCKAGESQKACEVYAKM-IGTSDNVGSDFYF-EGEHTDSIAPNV 611

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+  L    K  + ++L+  M S G EPN + Y  LI   C+ GK ++A +V   
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             + G  P  ++Y  LI A  KD RLDLAI+ L  M+   C P++V Y  ++   C+ G 
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +AL++   +   GC PNV +Y ++   L  SG    +L + ++M+++G  P+ +TY  
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++DEA  LL +M+ T +   V  Y  ++ GF  +++   S+ +L  +   G
Sbjct: 792 LINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHG 849

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV----SMHAISRDTFKRLNRTFPL----- 520
                  Y LLI+     G   +A+EL   ++    S++  S+DT+  L +   L     
Sbjct: 850 MVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLE 909

Query: 521 --LDVYKEIS 528
              ++Y EI+
Sbjct: 910 KAFELYSEIT 919



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 235/530 (44%), Gaps = 75/530 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           ++I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++   
Sbjct: 279 QMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNE 338

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS------- 153
           G  P+   +N+L+  +C A     A K+L+R+   G  P  V YNI IGS+CS       
Sbjct: 339 GCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSP 398

Query: 154 ----------------------------------RGMIESAFKVFDQLLRDNCKPTVITY 179
                                              G  + AF++   ++R    P   TY
Sbjct: 399 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTY 458

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
           + +I       + +KA  L  EM                   CK G++ QA  +   +ES
Sbjct: 459 SKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES 518

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P V++Y  LL   L   +  +   +   M+  G  PN +TYS L+  LC+ G+++ 
Sbjct: 519 VGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQK 578

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        + P+  +Y  LI   CK  ++  A E LD M 
Sbjct: 579 ACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMS 638

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S+GC P+ + Y+ ++  FCK G  D A E+F ++S  G  P V +Y ++  A++      
Sbjct: 639 SNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLD 698

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+ML     P+ +TY ++I  LCR G   +A+ LL  ME     P V++Y  +I
Sbjct: 699 LAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G  K+ +++ S+++   M  +GC PN  TY +LI      G   EA  L
Sbjct: 759 DGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSL 808



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 227/500 (45%), Gaps = 67/500 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           + G++ ++L  IE       K D V+CT++I    +    ++A+  +  +      P+V 
Sbjct: 254 KEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVV 310

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L++GF K  Q+    +++  + + G +P+   +N ++ S C+      A+K+ +++
Sbjct: 311 TYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRM 370

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C P  + Y I I  ++  G+   +  LL             A +    + +  C  
Sbjct: 371 AGCGCPPGYVVYNIFI-GSICSGEELPSPDLL-----------ALAEKVYEEMLASSCVL 418

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++     R L  MGK+++  +++  M+ +G  P+  TYS +I+ LC   K E A  + 
Sbjct: 419 NKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 478

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  K  G+ PD Y+Y  LI ++CK G ++ A  + D M S GC P +V Y  +L A+ K 
Sbjct: 479 QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKT 538

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML----------- 396
               QA +IF ++ D GC PN  +Y+ +   L  +G+  +A  + ++M+           
Sbjct: 539 KQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFY 598

Query: 397 ----------------------------------------SKGIEPDEITYNSLISCLCR 416
                                                   S G EP+ I Y++LI   C+
Sbjct: 599 FEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +D A  +   M    + PTV +Y  +I    K RR++ +I+VL+ M E  C PN  T
Sbjct: 659 VGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVT 718

Query: 477 YVLLIEGIGYGGWRAEAMEL 496
           Y  +I+G+   G   +A++L
Sbjct: 719 YTAMIDGLCRIGECQKALKL 738



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 184/412 (44%), Gaps = 20/412 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++   C+      A + L RL+  G+ P   TYN ++  L + G ++  F+V  ++  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE--------------MGMCKKGMVGQAFQ 215
                   T     QA   EG+   A+ +++                G+ +  +  +A  
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAIS 295

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +    C P+V++Y  LL   L   +    +++++ M++ G  PN   ++ L+ S C
Sbjct: 296 FLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYC 355

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD------LAIEFLDYMISDG 329
                  A  +L      G  P    Y+  I + C    L       LA +  + M++  
Sbjct: 356 NARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASS 415

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C+ + VN        C  G  D+A +I + +   G  P+ S+Y+ + + L  +    +A 
Sbjct: 416 CVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAF 475

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM S G+ PD  TY  LI   C+ G++++A     +MES    P+V++Y  ++  +
Sbjct: 476 LLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAY 535

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            KT+++ ++ ++   M + GC PN  TY  L++G+   G   +A E+   ++
Sbjct: 536 LKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 139/294 (47%), Gaps = 24/294 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   F+  + D ++  +  M+ + C P+VV  T +I    +  +  KA++++ ++E
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+V  Y +LI G  K+ +++++ ++  ++ ++G +P+ VTY ++I   C+ G+++
Sbjct: 744 KRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLD 803

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++ +      V  Y  ++Q          + K +  +G+            + 
Sbjct: 804 EAHSLLSEMKQTYWPKYVQGYCSVVQGF--------SKKFIASLGL------------LE 843

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV---TYSILISSLC 275
            LES G       Y +L+ +    G+ E+  +L  EM+      N+    TY+ LI +LC
Sbjct: 844 ELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALC 903

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
              + E A ++      KG+ P+  ++  LI    K  + + A++    M  +G
Sbjct: 904 LASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 240/467 (51%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   +L  +  M   G +P++ +C   I    +  K  KA+R +E ++  G +PD+ 
Sbjct: 243 RAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIV 302

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G+C  N+IE A +++  L S+G  PD V+Y  ++G LC    IE    + +++
Sbjct: 303 TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKM 362

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGM 209
           ++D N  P  +TY  LI      G  D A+  L E                    C+KG 
Sbjct: 363 VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   V  + SR C PDV++Y  ++     +G+ +E +K++ +M   G +PN V+Y+ 
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC  GK+ +A +++  ++E   TP+A +Y  ++  + ++G+L  A +    M+  G
Sbjct: 483 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C+N    +A +  E+  + GC  NV ++ T+       GD   AL
Sbjct: 543 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 602

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +TY +L   L + G +DEA  L+V M S    PT +++  +I  +
Sbjct: 603 SVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRY 662

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+++ + +L  M ++  KP  T Y  +IE +   G   EA +L
Sbjct: 663 CQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKL 707



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 218/460 (47%), Gaps = 22/460 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LIK      + +++L  I  + + GC PD V    ++    +E+K  +   +ME + 
Sbjct: 304 YNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMV 363

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     PD   YN LI    K    + A   L     +GF  D V Y+ ++ S C +G +
Sbjct: 364 QDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRM 423

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A  +   +   +C P V+TYT ++                   G C+ G + +A + +
Sbjct: 424 DEAKSLVIDMYSRSCNPDVVTYTAIVD------------------GFCRLGRIDEAKKML 465

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +   GC+P+ +SY  LL  L + GK  E  +++         PN +TY +++    R+
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK  +A D+ R   EKG  P     + LI + C++ ++  A ++L+  ++ GC  ++VN+
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++  FC+ G+ + AL + E +      P+  +Y  +F AL   G    A  +I +MLS
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 645

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG++P  +T+ S+I   C+ G VD+ + LL  M   + +P    YN +I   C    + E
Sbjct: 646 KGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRM--VKRKPFRTIYNHVIEKLCDFGNLEE 703

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           + ++L  +     K +  T  +L+E     G    A ++A
Sbjct: 704 AEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVA 743



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 20/396 (5%)

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A RV+ ++ + G E    A+  ++  + +A ++  A +VL  ++  G  P++   N  I 
Sbjct: 215 ARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIY 274

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            L     +E A +  +++     KP ++TY  LI+                  G C    
Sbjct: 275 VLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIK------------------GYCDLNR 316

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYS 268
           +  A + +  L S+GC PD +SY  ++  L    K E+ + LM +M+    L P+ VTY+
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  L + G  +DA+  L+ A++KG   D   Y  ++ ++C+ GR+D A   +  M S 
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C PD+V Y  I+  FC+ G  D+A ++ +++   GC PN  SY  + + L  SG  + A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             MI+        P+ ITY  ++    R+G + EA  L  +M    F PT +  N++I  
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            C+ +++ E+ + L     KGC  N   +  +I G 
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 592



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 18/417 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A+RV+ +++K G EP++   N  I    K  ++E A + L+R++  G  PD+VTYN
Sbjct: 246 KLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYN 305

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    IE A ++   L    C P  ++Y  ++     E + ++   L+++M   
Sbjct: 306 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKM--- 362

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         ++     PD ++YN L+  L   G  ++    + E   +G   + V
Sbjct: 363 --------------VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKV 408

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS ++ S C+ G+ ++A  ++     +   PD  +Y  ++  +C+ GR+D A + L  M
Sbjct: 409 GYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQM 468

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   C +G + +A E+     +    PN  +Y  +       G  
Sbjct: 469 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKL 528

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +  EM+ KG  P  +  N LI  LC++  V EA   L +  +      V+++  +
Sbjct: 529 SEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTV 588

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I GFC+   +  ++ VL  M+     P+  TY  L + +G  G   EA EL   ++S
Sbjct: 589 IHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 645



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 1/296 (0%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + K  +   A + +R +  RG +    ++  ++ +    GK     +++T M   G+EPN
Sbjct: 206 LSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPN 265

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +   +  I  L +  K E A+  L   +  G+ PD  +Y+ LI  YC   R++ A+E + 
Sbjct: 266 LSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIA 325

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            + S GC PD V+Y T++   CK    +Q   + EK+  D    P+  +YNT+   L   
Sbjct: 326 GLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKH 385

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    AL  + E   KG   D++ Y++++   C+ G +DEA  L++DM S    P V++Y
Sbjct: 386 GHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTY 445

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             I+ GFC+  RI+E+ ++L  M++ GCKPN  +Y  L+ G+ + G   EA E+ N
Sbjct: 446 TAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 501



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 187/410 (45%), Gaps = 20/410 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VM 95
           +  +  LI    + G  D++L F++     G   D V  + ++  F Q+ + ++A   V+
Sbjct: 372 QVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 431

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++  +   PDV  Y A++ GFC+  +I+ A K+L ++   G  P+ V+Y  ++  LC  G
Sbjct: 432 DMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSG 491

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
               A ++ +        P  ITY +++     EG+  +A  L  EM             
Sbjct: 492 KSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEIN 551

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +C+   V +A +++    ++GC  +V+++  ++     +G  E    ++ +M   
Sbjct: 552 LLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLS 611

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
              P+ VTY+ L  +L + G+ ++A +++     KGL P   ++  +I  YC+ GR+D  
Sbjct: 612 NKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDM 671

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +  LD M+       I  YN ++   C  GN ++A ++  K+       + ++ + +  +
Sbjct: 672 LNLLDRMVKRKPFRTI--YNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMES 729

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
               G  + A  +  +M  + + PD      +   L  DG + EA  L++
Sbjct: 730 CLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLML 779



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 4/162 (2%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           + G+ DE+   I  M++ G  P  V    +I ++ Q  + +  + +++ + K  +P    
Sbjct: 629 KKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR-KPFRTI 687

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I   C    +E A K+L ++       D  T ++++ S   +G+  SA+KV  Q+ 
Sbjct: 688 YNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMF 747

Query: 169 RDNCKPTVITYTILIQATMLEG---QTDKAMKLLDEMGMCKK 207
           R N  P +     + +  +L+G   + DK M    E G+ +K
Sbjct: 748 RRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQQK 789


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 242/478 (50%), Gaps = 21/478 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           +I   F  G+ D++      M   G  PDVV    +I    + ++ ++A  V + ++EK 
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN +I G CKA ++++A  V  ++  +G  P  VTYN +I  LC    ++ A 
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            VF Q++    KP  +TY  +I         DKA  +  +M                 G+
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   V +A    + +  +G +P+  +YN L+   L+ G+WEE  + + EM +  LEP+V
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY +L+  LC++GK  +A  +  +   KG+ P    Y  ++  Y K G L    + L+ 
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+++G  P+   +NT++ A+ K    D+ + IF K+   G  PNV +Y T+  AL   G 
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+   ++M+++G+ P+ + +NSL+  LC     ++   L ++M +   RP ++ +N 
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++   CK  R+ E+  ++ +M   G KP+  +Y  LI+G  +     EA++L + +VS
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 236/476 (49%), Gaps = 23/476 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +A   D++    + M+  G KPD +  T +I    + +  ++A  V + +++K  +P+  
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+    Q E   + +  + +    PDV TY +++  LC  G    A  +FD +
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +R   KP+V  Y I++     +G   +   LL+ M                    K+ M+
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +       ++ +G  P+V++Y  L+  L  +G+ ++      +MI+ G+ PN V ++ L
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC   K E   ++      +G+ PD   ++ ++   CK+GR+  A   +D M+  G 
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+++YNT++   C     D+A+++ + +   G  PN+ SYNT+      +G    A  
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EML KG+ P   TYN++++ L R G   EA  L V+M  +R   ++ +Y+II+ GFC
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALV 501
           K    +E+ ++  ++     + +  T+ ++I+G+  GG + +AM+L     AN LV
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLV 817



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 226/443 (51%), Gaps = 19/443 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      G+++E +  I+ M A+  +PDV     L+    +  K N+A  + + + + G
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P V  Y  ++ G+ K   +   + +L+ + + G SP+   +N +I +   R MI+   
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++ +    P V+TY  LI A                  +CK G V  A      + 
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDA------------------LCKLGRVDDAVLQFNQMI 567

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + G  P+ + +N L+  L  + KWE+ E+L  EM+++G+ P++V ++ ++ +LC++G+  
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  ++ +    GL PD  SY+ LI  +C   R+D A++ LD M+S G  P+IV+YNT+L
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLL 687

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +CK G  D A  +F ++   G  P V +YNT+ + L+ SG    A  +   M+     
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL 747

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
               TY+ ++   C++   DEA  +   + S   +  +I++NI+I G  K  R  +++++
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807

Query: 462 LAAMFEKGCKPNETTYVLLIEGI 484
            AA+   G  P+  TY L+ E +
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENL 830



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 199/410 (48%), Gaps = 25/410 (6%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSRG 155
           IL+     D    N L+ G C   ++  A  VL R +   G    VV+YN ++  LC R 
Sbjct: 110 ILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRR 169

Query: 156 MIESAFKVFDQLLR---DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
             E A ++   ++     +C P V++Y I+I     EGQ DKA  L  EMG+        
Sbjct: 170 RAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGV-------- 221

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
                         PDV++YN ++  L    + +  E +  +M+ +G++PN VTY+ +I 
Sbjct: 222 -------------SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIID 268

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+  + + A  V +   +KG+ P   +Y+ +I   CK   +D A      MI  G  P
Sbjct: 269 GLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP 328

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D V YNTI+   CK    D+A  +F+++ D G  P+  +Y  +   L  +    RA G+ 
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVF 388

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+ KG++P+  TYN LI      G  +E V  + +M +    P V +Y +++   CK 
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKN 448

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            + NE+  +  +M  KG KP+ T Y +++ G G  G  +E  +L N +V+
Sbjct: 449 GKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVA 498



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 213/435 (48%), Gaps = 35/435 (8%)

Query: 89  NKAVRVMEILEKYGEP-DVFAYNALISGFCKA---NQIELANKVLDRLR---SRGFSPDV 141
           + A+++ + L  +  P  V A N L+S   +A   +  +LA    +R+    S   +PD 
Sbjct: 25  HDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDC 84

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            TY+I+IG  C  G +E  F  F  +L+   +   I    L++                 
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLK----------------- 127

Query: 202 MGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---S 257
            G+C    VG+A    +R +   GC+  V+SYN LL+ L +  + EE  +L+  M+    
Sbjct: 128 -GLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQD 186

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
               P+VV+Y+I+I+    +G+ + A  +     E G++PD  +Y+ +I   CK   +D 
Sbjct: 187 SSCSPDVVSYNIVINGFFNEGQVDKAYSLFL---EMGVSPDVVTYNTIIDGLCKAQEVDR 243

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A +    M+  G  P+ V YNTI+   CK    D A  +F+K+ D G  P+  +YNT+  
Sbjct: 244 AEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIID 303

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +    RA G+  +M+ +G++PD +TYN++I  LC+   +D+A G+   M     +P
Sbjct: 304 GLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKP 363

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG-IGYGGWRAEAMEL 496
             ++Y III G CK + ++ +  V   M +KG KPN  TY  LI G +  G W      +
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423

Query: 497 ANALVSMHAISRDTF 511
               +S H +  D F
Sbjct: 424 KE--MSAHDLEPDVF 436



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 216/451 (47%), Gaps = 18/451 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK +E+    +SM+  G KP V +   ++  + ++   ++   ++ ++   G  P+  
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N +I  + K   I+    +  +++ +G SP+VVTY  +I +LC  G ++ A   F+Q+
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P  + +  L+       + +K  +L  EM                  +CK+G V
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + + S+   G +PDVISYN L+       + +E  KL+  M+S GL+PN+V+Y+ L
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+ G+ ++A  + R    KG+TP   +Y+ +++   + GR   A E    MI    
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           L  I  Y+ IL  FCKN   D+A +IF+ L  +    ++ ++N M   L+  G K  A+ 
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMD 806

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ P  +TY  +   L  +G ++E   L   ME +   P     N +I    
Sbjct: 807 LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLL 866

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               I  +   L+ + EK      +T  +LI
Sbjct: 867 DRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 18/382 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNAL 112
           DE ++    M   G  P+VV    LI    +  + + AV +  +++ +   P+   +N+L
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + G C  ++ E   ++   + ++G  PD+V +N ++ +LC  G +  A ++ D ++    
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           KP VI+Y  LI       + D+A+KLLD M                 G CK G +  A+ 
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             R +  +G  P V +YN +L  L   G++ E  +L   MI      ++ TYSI++   C
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++   ++A  + ++     L  D  +++ +I    K GR + A++    + ++G +P +V
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV 821

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  I     + G+ ++   +F  +   G  PN    N +   L   G+  RA   +S++
Sbjct: 822 TYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL 881

Query: 396 LSKGIEPDEITYNSLISCLCRD 417
             K    +  T + LIS   R+
Sbjct: 882 DEKNFSLEASTTSMLISLFSRE 903



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I   F+ G+ ++++    ++ ANG  P VV    + +   +E    +   +  ++E
Sbjct: 788 FNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME 847

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           K G  P+    NALI       +I  A   L +L  + FS +  T +++I SL SR
Sbjct: 848 KSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI-SLFSR 902


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 243/473 (51%), Gaps = 24/473 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G  D ++   +S+   G  PD +  + L+  F +  + + A+ +++ +  Y  +PD   Y
Sbjct: 173 GDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCY 232

Query: 110 NALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           NAL+ G  +  + E A +V ++L R  G SP++ TYN+M+  LC  GM + A  V+++++
Sbjct: 233 NALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMV 292

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            +N +P +ITY  +I         D A ++  EM                 G C  G VG
Sbjct: 293 ANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVG 352

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR--GLEPNVVTYSI 269
           +A++F  S+   G + +V SYN++L+ L + G  ++   L  E++ +   L P++VT+S 
Sbjct: 353 EAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFST 410

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC  G    ++ +L  A+  G   D +SY  +IS  CKDGRLD A++  + +  D 
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+   YN ++  FC+      A+ ++ ++++  C P   +YNT+   L  +   + A 
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
               EML KG   D  TY SLI  LCRD  +D A+ L   +     +  V+ +NI+I G 
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590

Query: 450 CKTRRINESIEVLAAMFEK-GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           C   +++E+ ++L+ M EK  C PN  TY  L++G    G   +A  L  A++
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAIL 643



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 208/424 (49%), Gaps = 24/424 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK--YGE---PDVFAYNALISGFCKANQ 121
           GC P V     L+  F + R+ + A      L    +G    P++  YN ++   C    
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A  + D LR RG +PD +TY+ ++        +++A  + D++     +P  + Y  
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L+      G+ +KAM++ +              Q VR     G  P++ +YN++L  L  
Sbjct: 235 LLGGCFRNGEFEKAMRVWE--------------QLVR---DPGASPNLATYNVMLDGLCK 277

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +G ++E   +   M++   +P+++TY  +I  LCR    + A  V     + GL PD   
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVI 337

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL- 360
           Y+ L+  +C  GR+  A +F D M   G + ++ +YN +L      G  D+A +++E L 
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLE 396

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            D    P++ +++TM   L   G   ++L ++ E  + G E DE +Y+S+IS LC+DG +
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           D+AV L   +    F+P    YN +I GFC+  + +++I V + M E  C P   TY  L
Sbjct: 457 DDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTL 516

Query: 481 IEGI 484
           I G+
Sbjct: 517 IHGL 520



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 196/427 (45%), Gaps = 56/427 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G F E+    E MVAN  +PD++    +I    +    + A RV   + K G  PDV 
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+ GFC A ++  A K  D +   G   +V +YNIM+  L   GM++ A  +++ L
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 168 LRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +D+   P ++T++ +I     +G  +K++++L+E                  G+CK G 
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 210 VGQAFQFVR-----------------------------------SLESRGCQPDVISYNM 234
           +  A +                                       +    C P  I+YN 
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  L    K+ E  +   EM+ +G   +V TY  LI  LCRD K + A+ +     +KG
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCLPDIVNYNTILAAFCKNGNADQA 353
           L  D   ++ LI   C  G++D A + L  M   + C P++V YNT++  F + G  D+A
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             ++  + + G  P++ SYNT    L S       + +++EML+ GI P  IT+N L+  
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695

Query: 414 LCRDGMV 420
           + + G +
Sbjct: 696 VIKYGPI 702



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 7/307 (2%)

Query: 209 MVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----ISRGLEPN 263
           M   A    R L S  GC P V S+N LL   +   ++ + +     +      R + PN
Sbjct: 99  MPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPN 158

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY+I++ SLC  G  + AV +  + + +GL PD  +Y  L+S + K+ RLD A+  LD
Sbjct: 159 LQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLD 218

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            M S    PD V YN +L    +NG  ++A+ ++E+L  D G  PN+++YN M   L   
Sbjct: 219 EMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKL 278

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +   M++   +PD ITY ++I  LCR   VD A  +  +M  T   P V+ Y
Sbjct: 279 GMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N ++ GFC   R+ E+ +   +M   G + N T+Y ++++G+  GG   +A +L   L  
Sbjct: 339 NSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEK 397

Query: 503 MHAISRD 509
             ++S D
Sbjct: 398 DDSLSPD 404



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 18/285 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           ++ E  +  +I    + G+ D+++   E +  +  KP+  +   LI  F Q  K + A+R
Sbjct: 437 ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIR 496

Query: 94  VM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           V  ++ E    P    YN LI G CKA +   A++    +  +G   DV TY  +I  LC
Sbjct: 497 VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLC 556

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
               I+ A  +++Q+L    +  V+ + ILI      G+ D+A +LL EM          
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK--------- 607

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
                   E   C P+V++YN L+      G +++   L   ++  GL P++++Y+  I 
Sbjct: 608 --------EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIK 659

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            LC   +T + V +L      G+ P A +++ L+ A  K G + +
Sbjct: 660 GLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQI 704



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 29/259 (11%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +PN+H+         +  LI    +A KF +++     M  N C P  +    LI    +
Sbjct: 472 KPNSHI---------YNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCK 522

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             K  +A R   E+LEK    DV  Y +LI G C+  +I+ A  + +++  +G   DVV 
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           +NI+I  LCS G ++ A ++  ++  ++NC P V+TY  L+      G  DKA  L   M
Sbjct: 583 HNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW--M 640

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            + + G+V                PD+ISYN  ++ L +  +  EG +L+ EM++ G+ P
Sbjct: 641 AILENGLV----------------PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIP 684

Query: 263 NVVTYSILISSLCRDGKTE 281
             +T++IL+ ++ + G  +
Sbjct: 685 TAITWNILVRAVIKYGPIQ 703



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 7/168 (4%)

Query: 340 ILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSAL-----WSSGDKIRALGMIS 393
           +L+AF +    D AL  F +L S +GC P V S+N +  A      +S  D   A  +  
Sbjct: 90  VLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFA-SLSH 148

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
               + I P+  TYN ++  LC  G +D AV L   +      P  I+Y+ ++ GF K  
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           R++ ++ +L  M     +P+   Y  L+ G    G   +AM +   LV
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLV 256


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 240/478 (50%), Gaps = 27/478 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK +++   ++ MV  GCKP+      LI+ + +E    +A+ +++ +EK  
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P   +Y A+I+G C    + LANK+L+++   G  P+VV Y+I+I +  S G IE A 
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGM 204
           ++ D +      P +  Y  +I      G+ ++A   L E                 +G 
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G + +A ++   +   G  P+   Y +L+      G   E   +   + + G+ P+V
Sbjct: 554 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDV 613

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T S  I  L ++G+ ++A+ V    KEKGL PD ++Y  LIS +CK G ++ A E  D 
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+I  YN ++   CK+G+  +A ++F+ + + G  P+  +Y+TM      S +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM SKG++P    YN+L+   C++G +++A+ L  +M    F  T +S+N 
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNT 792

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA--MELANAL 500
           +I G+CK+ +I E+ ++   M  K   P+  TY  +I+      W  +A  ME AN L
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID------WHCKAGKMEEANLL 844



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 237/472 (50%), Gaps = 18/472 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  DE++    SM   G  P+    T +     + ++ N+A    E ++K G +PD  
Sbjct: 275 QVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 334

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A +ALI GF +   I+   ++ D + S G   +++TYN++I  LC  G +E A ++   +
Sbjct: 335 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +   CKP   T+ +LI+    E    +A++LLDEM                 G+C    +
Sbjct: 395 VTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDL 454

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  +   G +P+V+ Y++L+    + G+ EE  +L+  M   G+ P++  Y+ +
Sbjct: 455 SLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 514

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS L + GK E+A   L   + +GL PDA ++   I  Y K G++  A ++ D M+  G 
Sbjct: 515 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 574

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+   Y  ++    K GN  +AL IF +L  +G  P+V + +     L  +G    AL 
Sbjct: 575 MPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 634

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + SE+  KG+ PD  TY+SLIS  C+ G V++A  L  +M      P +  YN ++ G C
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K+  I  + ++   M EKG +P+  TY  +I+G       AEA  L + + S
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 216/445 (48%), Gaps = 20/445 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +E M  +G KP+VV+ + LI  +  E +  +A R+++ +   G  PD+F YNA+IS   
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           KA ++E A+  L  ++ RG  PD VT+   I      G +  A K FD++L     P   
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            YT+LI                   G  K G + +A    R L + G  PDV + +  + 
Sbjct: 580 LYTVLIN------------------GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            LL  G+ +E  K+ +E+  +GL P+V TYS LIS  C+ G+ E A ++      KG+ P
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           + + Y+ L+   CK G +  A +  D M   G  PD V Y+T++  +CK+ N  +A  +F
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++   G  P+   YN +       GD  +A+ +  EML KG     +++N+LI   C+ 
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 800

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             + EA  L  +M + +  P  ++Y  +I   CK  ++ E+  +   M E+    +  TY
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860

Query: 478 VLLIEGIGYGGWRAEAMELANALVS 502
             L+ G    G  +E   L   +V+
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVA 885



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 217/484 (44%), Gaps = 54/484 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           RA + +E+    E M   G KPD   C+ LI  F +E   ++ +R+ +++   G P ++ 
Sbjct: 310 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 369

Query: 108 AYNALISGFCKANQIELANKVL-----------------------------------DRL 132
            YN LI G CK  ++E A ++L                                   D +
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
             R   P  V+Y  MI  LC    +  A K+ +++     KP V+ Y+ILI A   EG+ 
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
           ++A +LLD M                     G  PD+  YN ++  L   GK EE    +
Sbjct: 490 EEARRLLDGM------------------SCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            E+  RGL+P+ VT+   I    + GK  +A        + GL P+   Y  LI+ + K 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G L  A+     + + G LPD+   +  +    KNG   +AL++F +L + G  P+V +Y
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +++ S     G+  +A  +  EM  KGI P+   YN+L+  LC+ G +  A  L   M  
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P  ++Y+ +I G+CK+  + E+  +   M  KG +P+   Y  L+ G    G   +
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 493 AMEL 496
           AM L
Sbjct: 772 AMNL 775



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 212/442 (47%), Gaps = 20/442 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
            LI   F+AG   E+L     + A G  PDV  C+  I    +  +  +A++V  E+ EK 
Sbjct: 584  LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643

Query: 102  GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              PDVF Y++LISGFCK  ++E A ++ D +  +G +P++  YN ++  LC  G I+ A 
Sbjct: 644  LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            K+FD +     +P  +TY+ +I                   G CK   V +AF     + 
Sbjct: 704  KLFDGMPEKGLEPDSVTYSTMID------------------GYCKSENVAEAFSLFHEMP 745

Query: 222  SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            S+G QP    YN L+      G  E+   L  EM+ +G     ++++ LI   C+  K +
Sbjct: 746  SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQ 804

Query: 282  DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            +A  + +    K + PD  +Y  +I  +CK G+++ A      M     + D V Y +++
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864

Query: 342  AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              + K G + +   +FEK+   G  P+  +Y  +  A     + + A  +  E++ KG+ 
Sbjct: 865  YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924

Query: 402  PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
                 ++ LI+ LC+   + EA  LL +M     +P++ + N ++  F +  +++E+  V
Sbjct: 925  TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984

Query: 462  LAAMFEKGCKPNETTYVLLIEG 483
               +   G  P+ TT + L+ G
Sbjct: 985  FEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 222/480 (46%), Gaps = 19/480 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +AGK +E+  ++  +   G KPD V     I  + +  K  +A +   E+L+    P+  
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI+G  KA  +  A  +  RL + G  PDV T +  I  L   G ++ A KVF +L
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P V TY+ LI     +G+ +KA +L DEM                 G+CK G +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G +PD ++Y+ ++          E   L  EM S+G++P+   Y+ L
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C++G  E A+++ R   +KG      S++ LI  YCK  ++  A +    MI+   
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 818

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD V Y T++   CK G  ++A  +F+++ +     +  +Y ++       G       
Sbjct: 819 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 878

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  +M++KG++PDE+TY  +I   C++  + EA  L  ++           ++++I   C
Sbjct: 879 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 938

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   + E+ ++L  M E G KP+      L+      G   EA  +   + S+  +   T
Sbjct: 939 KREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 998



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 184/400 (46%), Gaps = 18/400 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           V+     YG      ++ LI  + +   ++ A  V    ++      ++  N ++  L  
Sbjct: 146 VLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLK 205

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            GM+E  +KV++ +L       V TYT L+ A                  +CK G +  A
Sbjct: 206 CGMMELFWKVYNGMLDAKMGFDVYTYTYLVGA------------------LCKTGDLRGA 247

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + +  ++ +G  P+   Y++++  +  +G  +E  +L   M  +GL PN  TY+I+ + 
Sbjct: 248 KRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAG 307

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LCR  +  +A       ++ GL PD  +   LI  + ++G +D  +   D M+S G   +
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           ++ YN ++   CK G  ++A EI + +  +GC PN  ++  +        +  RAL ++ 
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM  + + P  ++Y ++I+ LC    +  A  LL  M  +  +P V+ Y+I+I+ +    
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           RI E+  +L  M   G  P+   Y  +I  +   G   EA
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 210/475 (44%), Gaps = 49/475 (10%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL----EKYGEPDVF-AYNALIS 114
           + S + +   PDV      I+    + +     R+++       + G P    +++ L  
Sbjct: 61  VSSHIPSKLNPDV------IRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAV 114

Query: 115 GFCKANQIELANKVLDRL------------------RSRGFSPDVVTYNIMIGSLCSRGM 156
             C +    LAN VL ++                  R+ G S  VV ++I+I S    GM
Sbjct: 115 QLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV-FDILIDSYKRMGM 173

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  VF     D+   ++I    L++  +  G  +   K+ + M   K G        
Sbjct: 174 LDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGF------- 226

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                      DV +Y  L+  L   G     ++++ EM  +GL PN   YS++I  +C+
Sbjct: 227 -----------DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ 275

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G  ++AV++ R+  EKGL P+ Y+Y  + +  C+  R++ A    + M   G  PD   
Sbjct: 276 VGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 335

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            + ++  F + G+ D+ L I + +   G P N+ +YN +   L   G   +A  ++  M+
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G +P+  T+  LI   CR+  +  A+ LL +ME     P+ +SY  +I G C  + ++
Sbjct: 396 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 455

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            + ++L  M   G KPN   Y +LI      G   EA  L + + S   ++ D F
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM-SCSGVAPDIF 509


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 229/446 (51%), Gaps = 19/446 (4%)

Query: 52   KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
            KFD++      M+ +   P +V  T+++    +  K +  + +   +E  G   D++++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 111  ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             LI  FC+ ++  LA  +L ++   GF P +VT   ++   C     + A  + D +   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              +P V+ Y  +I                   G+CK   +  A +    +E +G   D +
Sbjct: 715  GLEPNVVIYNTVIN------------------GLCKNRDLNNALEIFYGMEKKGIVADAV 756

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            +YN L+  L N G+W +  +L+ +M+ R ++PNV+ ++ LI +  ++G   +A ++ +  
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              + + P+  +Y+ LI+ +C  GRL  A    D M+S GC PD+V YNT++  FCK+   
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +  +++F +++  G   +  +YNT+      +G    A  + + M+  G+ PD +TYN L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            + CLC +G +++A+ ++ D++  +    +I+YNIII G C+  ++ E+  +  ++  KG 
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 471  KPNETTYVLLIEGIGYGGWRAEAMEL 496
            K +   Y+ +I G+   G R EA +L
Sbjct: 997  KLDAIAYITMISGLCRNGLRREADKL 1022



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 18/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+++L     MV +   P VV  T+L+      R+    +   + +E +G   D++++ 
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI  FC+ +++ LA  +L ++   G+ P +VT+  ++   C R  I  AF +   +++ 
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P V+ Y  LI      G  + A++LL+EM   KKG +                 D++
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEME--KKGRLA---------------ADLV 207

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN LL  L   G+W +  +++ +M  R + P+V T++ LI +  + G  ++A ++ +  
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            +  + P+  +Y+ LI+  C  GRL  A +  D M S GC P++V YNT++  FCK+   
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +  +++F+++   G   +  +YNT+       G    A  + S M+S G+ PD IT+  L
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  LC +G +  A+    DM S      +++YNI+I G CK  ++ E+ E+   +  +G 
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           KP+  TY ++I G+   G R EA EL
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADEL 473



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 212/439 (48%), Gaps = 19/439 (4%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F +++    +  KFD  +Y    M   G   D+   T LI  F +  + + A+ ++  + 
Sbjct: 618  FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G +P +    +L++GFC+ N+ + A  ++D +   G  P+VV YN +I  LC    + 
Sbjct: 678  KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            +A ++F  + +       +TY  LI                   G+C  G    A + +R
Sbjct: 738  NALEIFYGMEKKGIVADAVTYNTLIS------------------GLCNSGRWTDAARLLR 779

Query: 219  SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +  R   P+VI +  L+ T +  G   E + L  EMI R + PN++TY+ LI+  C  G
Sbjct: 780  DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839

Query: 279  KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            +  DA  +      KG  PD  +Y+ LI+ +CK  R++  ++    M   G + D   YN
Sbjct: 840  RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899

Query: 339  TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            T++  +C+ G  + A ++F ++ D G PP++ +YN +   L ++G   +AL M+ ++   
Sbjct: 900  TLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959

Query: 399  GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
             ++ D ITYN +I  +CR+  V EA  L   +     +   I+Y  +I G C+     E+
Sbjct: 960  QMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREA 1019

Query: 459  IEVLAAMFEKGCKPNETTY 477
             ++   M E G  P+E  Y
Sbjct: 1020 DKLCTRMKEDGFMPSERIY 1038



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 19/361 (5%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            +  +F E++  ++SM   G +P+VV+   +I    + R  N A+ +   +EK G   D  
Sbjct: 697  QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV 756

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN LISG C + +   A ++L  +  R   P+V+ +  +I +    G +  A  ++ ++
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +R +  P ++TY  LI                   G C +G +G A      + S+GC P
Sbjct: 817  IRRSVHPNILTYNSLIN------------------GFCIQGRLGDAKHMFDLMVSKGCFP 858

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            DV++YN L+       + E+G KL  EM  +GL  +  TY+ LI   C+ GK   A  V 
Sbjct: 859  DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                + G+ PD  +Y+ L+   C +G+++ A+  ++ +  +    DI+ YN I+   C+N
Sbjct: 919  NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                +A  +F  L+  G   +  +Y TM S L  +G +  A  + + M   G  P E  Y
Sbjct: 979  DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038

Query: 408  N 408
            +
Sbjct: 1039 D 1039



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 222/505 (43%), Gaps = 48/505 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV---RVMEILE 99
           LI    + GK   +      MV+ G  PD++    L+       +   A+     M   E
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           KY    + AYN +I G CKA+++E A ++  RL   G  PD  TY IMI  LC  G    
Sbjct: 412 KY--LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469

Query: 160 AFKVFDQLLRDN--CKP------------TVITYTILI-----QATMLEGQ-----TDKA 195
           A ++F ++  D   C+              V   TI+I     ++ M  G      +D  
Sbjct: 470 ADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTT 529

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRS---LESRGCQPDVIS---------------YNMLLR 237
           +     +G+           FVR    L  RG  P+  S               Y   LR
Sbjct: 530 L-WSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLR 588

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           + L+  K+++   L  EM+     P++V ++ +++++ +  K +  + +    +  G++ 
Sbjct: 589 SELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D YS+  LI  +C+  R  LA+  L  M+  G  P IV   ++L  FC+     +A+ + 
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           + ++++G  PNV  YNT+ + L  + D   AL +   M  KGI  D +TYN+LIS LC  
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G   +A  LL DM   +  P VI +  +I  F K   + E+  +   M  +   PN  TY
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828

Query: 478 VLLIEGIGYGGWRAEAMELANALVS 502
             LI G    G   +A  + + +VS
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVS 853



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 172/380 (45%), Gaps = 19/380 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R  +   +L  +  M+  G  P +V    L+  F    + + A  ++  + 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIMIGSLCSRGMI 157
           K G EP+V  YN LI   CK   + +A ++L+ +  +G  + D+VTYN ++  LC  G  
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A ++   + +    P V T+T LI A + +G  D+A +L  +M               
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G +  A +    + S+GC P+V++YN L+       + E+G KL   M   GL
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             +  TY+ LI   C+ GK   A D+       G+TPD  ++  L+   C +G +  A+ 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + M S      IV YN ++   CK    ++A E+F +L   G  P+  +Y  M   L 
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462

Query: 381 SSGDKIRALGMISEMLSKGI 400
            +G +  A  +   M   GI
Sbjct: 463 KNGPRREADELFRRMKEDGI 482



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 165/344 (47%), Gaps = 18/344 (5%)

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + AF +F ++L+    P+++ +T ++ A     + D  + L  +M               
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM--------------- 641

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
              E+ G   D+ S+ +L+       ++     L+ +M+  G +P++VT   L++  C+ 
Sbjct: 642 ---ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + ++AV ++ +  E GL P+   Y+ +I+  CK+  L+ A+E    M   G + D V Y
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT+++  C +G    A  +   +      PNV  +  +       G+ + A  +  EM+ 
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + + P+ +TYNSLI+  C  G + +A  +   M S    P V++YN +I GFCK++R+ +
Sbjct: 819 RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +++   M  +G   +  TY  LI G    G    A ++ N +V
Sbjct: 879 GMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 922



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 124/599 (20%), Positives = 228/599 (38%), Gaps = 139/599 (23%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L +D     F  L+       +  ++   + SMV +G +P+VV+   LI    +    N 
Sbjct: 129 LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNI 188

Query: 91  AVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           A+ ++  +EK G    D+  YN L++G C + +   A ++L  +  R  +PDV T+  +I
Sbjct: 189 ALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALI 248

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            +   +G ++ A +++ Q+L+ +  P  +TY  LI    + G+   A K  D M      
Sbjct: 249 DAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF 308

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G CK   V    +  + +   G   D  +YN L+     +GK    + +
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 252 MTEMISRGLEPNVVT-----------------------------------YSILISSLCR 276
            + M+S G+ P+++T                                   Y+I+I  LC+
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             K E+A ++      +G+ PDA +Y  +I   CK+G    A E    M  DG +    +
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAED 488

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS--------YNTMFSALWSSGDKIRA 388
                    ++G  +Q        + + CP    S        Y    + LWSS   +  
Sbjct: 489 -----GHLGEHGTNNQV----SLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIP 539

Query: 389 LGMISE----------MLSKGIEPDEITYN-------------------SLISCLCRDGM 419
           +   S           +L +G  P+  +++                   S + C+     
Sbjct: 540 IASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCI----K 595

Query: 420 VDEAVGLLVDMESTRFRPTVI-----------------------------------SYNI 444
            D+A GL  +M  +R  P+++                                   S+ I
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +I  FC+  R + ++ +L  M + G +P+  T   L+ G   G    EA+ L +++  +
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 75/150 (50%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL++F ++      P+V  +  + +A+ +       +    +M   GI  D  ++  L
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I C CR   +  A+ +L  M    + P+++++  ++ GFC   RI+++  ++A+M + G 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +PN   Y  LI+ +   G    A+EL N +
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEM 196


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 241/467 (51%), Gaps = 19/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYG-EPDV 106
           R G+ +        ++  G + +V++ ++L+K     ++ ++A  ++ + + ++G  PDV
Sbjct: 102 RMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDV 161

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AYN +I+GF +  Q+E A  +   +  +G  P+VVTY  +I  LC   +++ A  VF Q
Sbjct: 162 VAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQ 221

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGM 209
           ++    KP   TY  LI   +  G+  + +++L+EM                  +CK G 
Sbjct: 222 MIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGR 281

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +A  F  S+  +G +PDV  Y +LL      G   E    +  M+  G+ PN   ++I
Sbjct: 282 CREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNI 341

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +  +  +    E+A+ +    +++GL+PD  S+  LI A CK GR+D A+   + MI++G
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+I  +++++   C  G  ++A E+F ++ D G   +   +NT+   L + G  + A 
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQ 461

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +I  M+  G+ P+ I+YN+L++  C  G +DEA  LL  M S   +P   +Y I++ G+
Sbjct: 462 RLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           CK RR++++  +   M  KG  P   TY  ++ G+   G  +EA EL
Sbjct: 522 CKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 237/486 (48%), Gaps = 19/486 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           +I   FR G+ +++      M+  G  P+VV  T +I    + +  ++A  V + ++++ 
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD   YN LI G+    + +   ++L+ + + G  PD +TY +++  LC  G    A 
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             FD + R   KP V  Y IL+     +G   +    LD M                   
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            KK M+ +A      +  +G  PDV+S+  L+  L  +G+ ++      +MI+ G+ PN+
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             +S L+  LC  GK E A ++     ++G+  DA  ++ L+   C +GR+  A   +D 
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI  G  P++++YNT++A  C  G  D+A ++ + +   G  PN  +Y  +      +  
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EML KG+ P   TYN+++  L + G   EA  L ++M ++R +  + +YNI
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I+ G CK   ++E+ ++   +  K  + +  T+ ++I  +  GG + +AM+L  A +S +
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLF-ATISAY 645

Query: 505 AISRDT 510
            +  D 
Sbjct: 646 GLVPDV 651



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 221/490 (45%), Gaps = 95/490 (19%)

Query: 89  NKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLD------RLRSRGFSPDV 141
           ++A+++ + L     P  V A+N L++   +A     + +V+       R  S   +P+ 
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 142 VTYNIMIGSLCSRGMIESAFKVF---------------DQLLRD---------------- 170
            TY+I+IG  C  G +E  F  F                QLL+                 
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 171 -----NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
                 C P V+ Y  +I     EGQ +KA  L  EM                 G+CK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           +V +A    + +  RG +PD  +YN L+   L+ GKW+E  +++ EM + GLEP+ +TY+
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L+  LC++G+  +A     +   KG+ PD   Y  L+  Y   G L     FLD M+ +
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 329 G------------CL-----------------------PDIVNYNTILAAFCKNGNADQA 353
           G            C                        PD+V++  ++ A CK G  D A
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           +  F ++ + G  PN+  ++++   L + G   +A  +  E+L +GI  D + +N+L+  
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCN 450

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC +G V EA  L+  M     RP VISYN ++ G C T RI+E+ ++L  M   G KPN
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 474 ETTYVLLIEG 483
           E TY +L+ G
Sbjct: 511 EFTYTILLRG 520



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 219/466 (46%), Gaps = 18/466 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+  F +SM   G KPDV +   L+  +  +   ++    ++++   G  P+  
Sbjct: 278 KNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRR 337

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N +   + K   IE A  + +++R +G SPDVV++  +I +LC  G ++ A   F+Q+
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQM 397

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P +  ++ L+      G+ +KA +L  E+                  +C +G V
Sbjct: 398 INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRV 457

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G +P+VISYN L+      G+ +E  KL+  M+S GL+PN  TY+IL
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTIL 517

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+  + +DA  + R    KG+TP   +Y+ ++    + GR   A E    MI+   
Sbjct: 518 LRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT 577

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN IL   CKN   D+A ++F +L       +  ++N M  AL   G K  A+ 
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ PD +TY  +   L  +G + E  GL   ME +   P     N ++    
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
               I+ +   L  + EK      +T  +LI     G ++  A  L
Sbjct: 698 HRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSL 743



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 21/315 (6%)

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           D+A+KL DE+  C +    +AF  + ++ SR GC                    E    L
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSS----------------ASERVVSL 74

Query: 252 MTEMI---SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            T M    S  + PN  TYSILI   CR G+ E          + G   +      L+  
Sbjct: 75  FTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKG 134

Query: 309 YCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            C   R+D A + L   +S+ GC PD+V YNT++  F + G  ++A  +F ++ D G PP
Sbjct: 135 LCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPP 194

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           NV +Y T+   L  +    RA G+  +M+ +G++PD  TYN LI      G   E V +L
Sbjct: 195 NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQML 254

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M +    P  I+Y +++   CK  R  E+     +MF KG KP+   Y +L+ G    
Sbjct: 255 EEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATK 314

Query: 488 GWRAEAMELANALVS 502
           G  +E     + +V 
Sbjct: 315 GALSEMHSFLDLMVG 329


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 239/466 (51%), Gaps = 26/466 (5%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG- 102
           IK   R  +   +L  + +M + GC+ + V+   +I  F++E    +A  +   + + G 
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF- 161
            P +  +N L+   CK   ++   K+L+++   G  P++ T+NI I  LC +G++E A  
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANS 272

Query: 162 ------KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-------------- 201
                     +++    +P   TY  +I      G+   A ++L +              
Sbjct: 273 KVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYC 332

Query: 202 ---MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              +G+C+ G +  A         +G +P ++ YN L++ L   G   +  +LM +M   
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+ P++ TY+++I+ LC+ G   DA ++L AA  KG  PD ++++ LI  YCK  ++D A
Sbjct: 393 GMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNA 452

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           I  LD M S G  PD++ YN+IL   CK    +  +E F+ + + GC PN+ +YN +  +
Sbjct: 453 IGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIES 512

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-RFRP 437
           L  +     AL ++ E+ ++G+ PD +++ ++IS  C +G +DEA  L   ME   R   
Sbjct: 513 LCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICH 572

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           TV +YNI+I  F +   ++ + ++   M +KGC P+  TY ++I+G
Sbjct: 573 TVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDG 618



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 225/443 (50%), Gaps = 25/443 (5%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           ++ + ++ K  +AV V E ++ Y  EP +F+YNA+++   +      A+KV  R++  G 
Sbjct: 83  MRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGI 142

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           +PDV T+ I I S C      +A ++ + +    C+   + Y  +I     E    +A +
Sbjct: 143 APDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYE 202

Query: 198 LLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L ++M                  +CKKG + +  + +  +   G  P++ ++N+ ++ L 
Sbjct: 203 LFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLC 262

Query: 241 NMGKWE-------EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
             G  E       E E  + +M+++GLEP+  TY+ +I    + GK +DA  +L+ AK K
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD ++Y  LI   C+DG +D A+   +  +  G  P IV YNT++    + G   +A
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L++   +S  G  P++ +YN + + L   G    A  +++  ++KG  PD  T+N+LI  
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            C+   +D A+G+L  M S    P VI+YN I+ G CK  +  + +E    + EKGC PN
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPN 502

Query: 474 ETTYVLLIEGIGYGGWRAEAMEL 496
             TY +LIE +       EA++L
Sbjct: 503 IITYNILIESLCKARKVTEALDL 525



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 228/459 (49%), Gaps = 26/459 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDV----VMCTKLIKKFFQERKSNKAVRVM 95
           F KL+    + G   E    +  ++ NG  P++    +    L +K   E  ++K V   
Sbjct: 219 FNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAE 278

Query: 96  EILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             L K      EPD F YN +I G+ K  +I+ A+++L   + +GF PD  TY  +I  +
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G I+ A  +F++ L    KP+++ Y  LI+    +G   KA++L+++M         
Sbjct: 339 CQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDI 398

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK G V  A   + +  ++G  PD+ ++N L+       K +    ++  
Sbjct: 399 WTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDS 458

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M S G+ P+V+TY+ +++ LC+  K ED ++  +   EKG  P+  +Y+ LI + CK  +
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK 518

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYN 373
           +  A++ L+ + + G +PD V++ T+++ FC NG+ D+A ++F ++         V++YN
Sbjct: 519 VTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYN 578

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            M +A     D   A  +  EM  KG +PD  TY  +I   C+ G V+     L+     
Sbjct: 579 IMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEI 638

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            F P++ ++  +I   C   R++E++ ++  M   G  P
Sbjct: 639 GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 189/392 (48%), Gaps = 20/392 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ++  ++    +     F   E  +  LI    + G  D +L   E  +  G KP +V+  
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LIK   Q+    KA+++M  + K G  PD++ YN +I+G CK   +  AN +L+   ++
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ PD+ T+N +I   C R  +++A  + D +      P VITY  ++            
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN----------- 476

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+CK        +  + +  +GC P++I+YN+L+ +L    K  E   L+ E+
Sbjct: 477 -------GLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEI 529

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGR 314
            +RGL P+ V++  +IS  C +G  ++A  + R  +++  +     +Y+ +I+A+ +   
Sbjct: 530 RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLD 589

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D+A +    M   GC PD   Y  ++  FCK GN +   +   K  ++G  P+++++  
Sbjct: 590 MDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGR 649

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           + + L        A+G++  M+  G+ P+ + 
Sbjct: 650 VINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 61/404 (15%)

Query: 160 AFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-------------- 204
           A  +F+ + + D  K T +TY  +I+     G+ D   ++L EM +              
Sbjct: 23  ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSA 82

Query: 205 ----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
                +KG V +A      ++   C+P + SYN ++  L+  G + +  K+   M   G+
Sbjct: 83  MRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGI 142

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+V T++I I S CR  +   A+ +L     +G   +A  Y  +IS + ++     A E
Sbjct: 143 APDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYE 202

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + M+  G  P I  +N ++   CK G+  +  ++  K+   G  PN+ ++N     L 
Sbjct: 203 LFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLC 262

Query: 381 SSG-------DKIRALGMISEMLSKGIEP------------------------------- 402
             G         + A   + +M++KG+EP                               
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322

Query: 403 ----DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
               DE TY SLI  +C+DG +D A+ L  +      +P+++ YN +I G  +   + ++
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++++  M ++G  P+  TY L+I G+   G  ++A  L NA ++
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 377 SALWSSGDKIR---ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           SA+ + G K +   A+ +   M     EP   +YN++++ L   G  ++A  + + M+  
Sbjct: 81  SAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHE 140

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P V ++ I I  FC+T+R   ++ +L  M  +GC+ N   Y  +I G     ++ EA
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEA 200

Query: 494 MELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
            EL N ++ +              FP +  + ++ H+  K
Sbjct: 201 YELFNKMLRL------------GIFPHIATFNKLMHILCK 228


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 231/454 (50%), Gaps = 5/454 (1%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKF+++   ++ M+  G  PD    TK+I    Q +K  K+  + + +++ G  PDV+ Y
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A    D +RS G SP+VVTY  ++ +      +  A  +F +++ 
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P  +TY+ LI      G+  KA ++ +++ +   G V   F F    ++    P+V
Sbjct: 551 AACYPNAVTYSALIDGLCKAGEIQKACEVYEKL-IGTSGNVESDFYF-EGNDTCTIAPNV 608

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+  L    K  +  +L+  M++ G EPN + Y  LI   C+ GK ++A +V   
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             + G  P  ++Y  LI    KDGRLDLA++ L  M++D C P++V Y  ++    K G 
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++AL +   + + GC PNV +Y  +   L  +G    +L +  +M SKG  P+ +TY  
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++DEA  LL +M+ T +   +  Y+  + GF  +++   S+ +L  M    
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHE 846

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             P    Y +LI+     G    A+EL   LV +
Sbjct: 847 TVPIAPVYGMLIDSFSKAGRLETALELHKELVEV 880



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 243/547 (44%), Gaps = 75/547 (13%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F++      ++I     A  F+E++ F+  M  N C P+VV    L+  F ++++     
Sbjct: 267 FNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCK 326

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           R++ ++   G  P+   +N+L+ G+C A     A K+ +R+ + G  P  V YNI IGS+
Sbjct: 327 RIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSI 386

Query: 152 CSR-----------------------------------------GMIESAFKVFDQLLRD 170
           C +                                         G  E AF++  +++R 
Sbjct: 387 CGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK 446

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P   TYT +I       + +K+  L  EM                   CK G++ QA
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA 506

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
             +   + S GC P+V++Y  LL   L   +  +   +   M+     PN VTYS LI  
Sbjct: 507 RSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDG 566

Query: 274 LCRDGKTEDAVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           LC+ G+ + A +V                        + P+  +Y  LI   CK  ++  
Sbjct: 567 LCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSD 626

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A E LD M++ GC P+ + Y+ ++  FCK G  D A E+F +++  G  P+V +Y ++  
Sbjct: 627 AHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLID 686

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            ++  G    A+ ++SEML+    P+ +TY ++I  L + G +++A+ LL  ME     P
Sbjct: 687 RMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V++Y  +I G  KT + + S+++   M  KGC PN  TY +LI      G   EA  L 
Sbjct: 747 NVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806

Query: 498 NALVSMH 504
           + +   H
Sbjct: 807 DEMKHTH 813



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 201/482 (41%), Gaps = 78/482 (16%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+++  +    ++A+  +  L+ +G  P    YNAL+     A Q+E+  +V   + + G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F  D  T      +LC  G    A  + +   +++     +  T +I   M     ++AM
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEAM 291

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             L  M                 G  KK   G   + +  + + GC P+   +N L+   
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD---------------------- 277
            N G +    KL   M + G  P  V Y+I I S+C                        
Sbjct: 352 CNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAA 411

Query: 278 -------------------GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
                              GK E A  +L+    KG  PD  +Y  +I+  C+  +++ +
Sbjct: 412 SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 M   G  PD+  Y  ++ +FCK G  +QA   F+++  VGC PNV +Y  +  A
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA-------VGLLVDME 431
              S   I+A  +   M+     P+ +TY++LI  LC+ G + +A       +G   ++E
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVE 591

Query: 432 STRF---------RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           S  +          P V++Y  +I G CK ++++++ E+L AM   GC+PN+  Y  LI+
Sbjct: 592 SDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651

Query: 483 GI 484
           G 
Sbjct: 652 GF 653



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 197/424 (46%), Gaps = 39/424 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  L+    ++ +  ++      MV   C P+ V  + LI    +  +  KA  V E L 
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584

Query: 99  --------EKYGE--------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                   + Y E        P+V  Y ALI G CKA ++  A+++LD + + G  P+ +
Sbjct: 585 GTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQI 644

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I   C  G I++A +VF ++ +    P+V TYT LI     +G+ D AMK+L EM
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ K G + +A   +  +E +GC P+V++Y  L+  L   GK 
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA 764

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +   KL  +M S+G  PN VTY +LI+  C  G  ++A  +L   K          Y   
Sbjct: 765 DASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCA 824

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +  + K  +   ++  L+ M S   +P    Y  ++ +F K G  + ALE+ ++L +V  
Sbjct: 825 VQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSS 882

Query: 366 PPNVSS---YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
             N++S   Y ++  AL  +     A  + +EM  KGI PD I + SL+  L      DE
Sbjct: 883 SLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDE 942

Query: 423 AVGL 426
           A+ L
Sbjct: 943 ALQL 946



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 119/334 (35%), Gaps = 73/334 (21%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+L+R     G W+E  + +  +   G  P+ VTY+ L+  L   G+ E    V +    
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 293 KGLTPDAYSYDPLISAYCKDGR--------------------------------LDLAIE 320
            G   D  +      A CK GR                                 + A+ 
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMS 292

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           FL  M  + C+P++V Y T+L+ F K         I   +   GC PN S +N++     
Sbjct: 293 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC 352

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLIS---------------------------- 412
           ++GD   A  + + M + G  P  + YN  I                             
Sbjct: 353 NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAAS 412

Query: 413 -------------CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
                        CLC  G  ++A  +L +M    F P   +Y  +I   C+ +++ +S 
Sbjct: 413 CVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSF 472

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            +   M   G  P+  TY +LI+     G   +A
Sbjct: 473 LLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA 506



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 3/198 (1%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+   C+ G  D A+E L  +   G  P  V YN ++      G  +    + +++S  G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              + S+      AL   G    AL M+ +   +    D +    +IS L    + +EA+
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAM 291

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             L  M      P V++Y  ++ GF K ++      ++  M  +GC PN + +  L+ G 
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351

Query: 485 GYGGWRAEAMELANALVS 502
              G  A A +L N + +
Sbjct: 352 CNAGDYAYAYKLFNRMTT 369


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 242/482 (50%), Gaps = 55/482 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +A K  E++  +  M A GC P+ V CT L+    ++ + ++A+ ++E ++K G
Sbjct: 39  LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 98

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + DV  Y  LISGFC    ++   ++ D +  +G S +VVTY+ ++  LC  G  + A 
Sbjct: 99  FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 158

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V + +      P V+TYT LI     +G+   AM LL+ M                 G+
Sbjct: 159 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 218

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG--LEP 262
           CK+G+V  AF+ +R +  +G + DV++YN L++ L + GK +E  KL   M      LEP
Sbjct: 219 CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 278

Query: 263 NVVTYSILISSLCRDGKTEDAVDV-----------------------LRAAKEK------ 293
           NV T+++LI  LC++G+   AV +                       L+A K K      
Sbjct: 279 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 338

Query: 294 ------GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 G  P++++Y  LI  +CK   L++A      M + G  P + +YNT++A+ CK 
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 398

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ +QA  +F+++ +  C P++ S+NTM      +GD      +  +M+  G+ PD +T+
Sbjct: 399 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 458

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           ++LI+ L + G +DEA   L  M ++ F P  + Y+ ++ G        E I +L  M  
Sbjct: 459 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 518

Query: 468 KG 469
           KG
Sbjct: 519 KG 520



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 21/464 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   R G   E++  I  M      PD+V    LI    + +K  +AV ++  +E  G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+      L+ G CK  +++ A ++L+ ++ +GF  DVV Y  +I   C+ G ++   
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++FD++L       V+TY+ L+                   G+C+ G   +A   + ++ 
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVH------------------GLCRLGQWKEANTVLNAMA 165

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  PDV++Y  L+  L   G+      L+  M+ +G EP+ VTY++L+S LC++G   
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCL-PDIVNYNT 339
           DA  +LR   EKG   D  +Y+ L+   C  G++D A++  + M  ++ CL P++  +N 
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK G   +A++I  K+   G   N+ +YN +      +G    A+ +  ++L  G
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             P+  TY+ LI   C+  M++ A GL  +M +    P +  YN ++   CK   + ++ 
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +   M    C+P+  ++  +I+G    G      EL   +V M
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 449



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 191/376 (50%), Gaps = 20/376 (5%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++ G C+   +  A  ++  +  +  SPD+V+YN +I  LC    ++ A  +  ++  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P  +T T L+                   G+CK G + +A + + +++ +G   DV
Sbjct: 62  AGCFPNSVTCTTLMD------------------GLCKDGRMDEAMELLEAMKKKGFDADV 103

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + Y  L+    N G  + G++L  EM+ +G+  NVVTYS L+  LCR G+ ++A  VL A
Sbjct: 104 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 163

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E G+ PD  +Y  LI   CKDGR   A++ L+ M+  G  P  V YN +L+  CK G 
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITY 407
              A +I   + + G   +V +YNT+   L   G    AL + + M      +EP+  T+
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LC++G + +AV +   M        +++YN+++ G  K  +I E++E+   + +
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343

Query: 468 KGCKPNETTYVLLIEG 483
            G  PN  TY +LI+G
Sbjct: 344 LGFVPNSFTYSILIDG 359



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 20/394 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           L+    R G++ E+   + +M  +G  PDVV  T LI    ++ ++  A+ ++ ++ EK 
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP    YN L+SG CK   +  A K+L  +  +G   DVVTYN ++  LC +G ++ A 
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263

Query: 162 KVFDQLL-RDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           K+F+ +   +NC +P V T+ +LI     EG+  KA+K+  +M                 
Sbjct: 264 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 323

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G  K G + +A +  + +   G  P+  +Y++L+     M      + L  EM + GL P
Sbjct: 324 GCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 383

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            +  Y+ L++SLC++G  E A  + +        PD  S++ +I    K G      E  
Sbjct: 384 ALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ 443

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+  G  PD + ++T++    K G  D+A    E++   G  P+   Y+++   L S 
Sbjct: 444 MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK 503

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           GD    + ++ +M +KG   D    +++++CLC 
Sbjct: 504 GDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 150/268 (55%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N++L+ L   G   E   L+ EM  + + P++V+Y+ LI+ LC+  K ++AV +L   + 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  P++ +   L+   CKDGR+D A+E L+ M   G   D+V Y T+++ FC NGN D+
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
             E+F+++   G   NV +Y+ +   L   G    A  +++ M   GI PD +TY  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+DG    A+ LL  M      P+ ++YN+++ G CK   + ++ ++L  M EKG K 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  TY  L++G+   G   EA++L N++
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSM 269



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 127/234 (54%)

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +I++  LCR+G   +A+ ++R    K ++PD  SY+ LI+  CK  +L  A+  L  M +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC P+ V   T++   CK+G  D+A+E+ E +   G   +V  Y T+ S   ++G+  R
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
              +  EML KGI  + +TY+ L+  LCR G   EA  +L  M      P V++Y  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G CK  R   ++++L  M EKG +P+  TY +L+ G+   G   +A ++   ++
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 235


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 254/507 (50%), Gaps = 59/507 (11%)

Query: 49  RAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EP 104
            A + DE++   +  M   GC P+ +    +IK    + +S +A+ +++ + K G    P
Sbjct: 203 HAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSP 262

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV ++N +I GF K  ++  A  +++ +  +G  PDVVTYN ++ +LC    ++ A  V 
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVL 322

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            Q++    +P  +TYT +I      G   ++ K+                   R + S+G
Sbjct: 323 RQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMF------------------RKMTSKG 364

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P ++++N  + +L   G+ ++ E++   M ++G  P++V+YSIL+     +G+  D  
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++  +  +KG+  + + ++ LISA+ K G +D A+     M   G  PD+V Y+T+++AF
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI---- 400
           C+ G    A+E F ++  +G  PN   Y+++       GD ++A  ++SEM+SKGI    
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544

Query: 401 --------------------------------EPDEITYNSLISCLCRDGMVDEAVGLLV 428
                                            P  +T+NSLI   C  G +++A G+L 
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            M S    P V++YN ++ G+CK+ +I++ + +   M  K  KP   TY ++++G+ + G
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664

Query: 489 WRAEAMELANALV-SMHAISRDTFKRL 514
             + A ++ + ++ S  A+  DT+K L
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKIL 691



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 233/466 (50%), Gaps = 20/466 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  +I   F+ G+  ++   I  MV  G +PDVV    ++    + R  +KA  V+ +++
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV 326

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  EPD   Y A+I G+  +   + + K+  ++ S+G  P +VT+N  + SLC  G  +
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F  +      P +++Y+IL+     EG+      L   M    KG+V     F  
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA--DKGIVANCHCF-- 442

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                         N+L+      G  +E   + TEM  +G+ P+VVTYS LIS+ CR G
Sbjct: 443 --------------NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-LPDIVNY 337
           +  DA++        GL P+   Y  LI  +C  G L  A E +  M+S G   P+IV +
Sbjct: 489 RLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFF 548

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++I+ + C  G    A ++F  +  +G  P + ++N++       G   +A G++  M+S
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GIEPD +TYN+L+S  C+ G +D+ + L  +M   + +PT ++Y+I++ G     R + 
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++   M + G   +  TY +L++G+       EA+ L + L +M
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAM 714



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 234/531 (44%), Gaps = 58/531 (10%)

Query: 6   SCINPKSNERVRVSSSAETRPNTHLLSFDV------------KETQFMKLIKRSFRAGKF 53
           S   P S  R+  SSS+   P   LL                 +  F+  I R  RAG F
Sbjct: 31  SSTTPMSGRRL-FSSSSTPMPRLQLLPRRSSSSTSPTSRCWDPQVAFVAAIAR-VRAGTF 88

Query: 54  --DESLYFIESMVANGC----------------KPDVVMCTK---LIKKFFQERKSNKAV 92
             D++ +  + ++  G                  PD V C+    L+   F     N+  
Sbjct: 89  STDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALF-----NRIC 143

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R  E   +     V  Y  L+   C+A + +L      RL   G     +  N  +  LC
Sbjct: 144 R-EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLC 202

Query: 153 SRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
                + A  V    + D  C P  I+Y  +I++   + ++ +A+ ++  M         
Sbjct: 203 HAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRM--------- 253

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                  + E   C PDV+S+N ++      G+  +   L+ EM+ +G+EP+VVTY+ ++
Sbjct: 254 -------AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIV 306

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +LC+    + A  VLR   +KG+ PD  +Y  +I  Y   G    + +    M S G +
Sbjct: 307 DALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLI 366

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P IV +N+ +++ CK+G +  A EIF+ ++  G  P++ SY+ +     + G       +
Sbjct: 367 PGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNL 426

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M  KGI  +   +N LIS   + GM+DEA+ +  +M+    RP V++Y+ +I  FC+
Sbjct: 427 FHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             R+ +++E  + M   G +PN   Y  LI G    G   +A EL + ++S
Sbjct: 487 MGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 198/430 (46%), Gaps = 20/430 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  DE++     M   G +PDVV  + LI  F +  +   A+     + 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMI 157
             G EP+   Y++LI GFC    +  A +++  + S+G   P++V ++ +I SLC+ G +
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A  VF+ ++    +PT++T+  LI    L G+ +KA  +LD M               
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM--------------- 606

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               S G +PDV++YN L+      GK ++G  L  EM+ + ++P  VTYSI++  L   
Sbjct: 607 ---VSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHA 663

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+T  A  +     + G   D  +Y  L+   C++   D AI     + +  C  DI   
Sbjct: 664 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 723

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT++ A  K    ++A ++F  +S  G  PNVS+Y  M   L   G    A  M S M  
Sbjct: 724 NTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  P     N +I  L + G + +A   +  ++ T       + ++++  F    +  E
Sbjct: 784 SGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHRE 843

Query: 458 SIEVLAAMFE 467
            I+ L A ++
Sbjct: 844 QIKFLPAKYQ 853



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 19/417 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  ++    + M   G  PD+V  + L+  +  E +      +   +   G   +  
Sbjct: 381 KHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH 440

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LIS   K   ++ A  V   ++ +G  PDVVTY+ +I + C  G +  A + F Q+
Sbjct: 441 CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    +P  + Y  LI    + G   KA +L+ EM                   +C +G 
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A      +   G +P ++++N L+     +GK E+   ++  M+S G+EP+VVTY+ 
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+S  C+ GK +D + + R    K + P   +Y  ++      GR   A +    MI  G
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              DI  Y  +L   C+N   D+A+ +F KL  + C  +++  NT+ +AL+    +  A 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            + + + + G+ P+  TY  +I  L ++G V+EA  +   ME +   P+    N II
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 241/539 (44%), Gaps = 88/539 (16%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLI------------KKFFQE----------- 85
           RA + D++L   + + + GCKP+    T +I            K FF E           
Sbjct: 311 RANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVI 370

Query: 86  ------RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
                 ++ ++A  + E L+  G  P+V AY A+I G  KA +IE   K  + +      
Sbjct: 371 KGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV 430

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P   TY ++I  LC   M+  A KVF+Q+++  C P  ITYT LI       + D+A KL
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LD M                 G CK  M+ +A + +  +  RGC+P +  +  LL   L+
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+ EE  +++TEM +RG  P+V+ Y+ LI  L   G+  +A  V  +  EKG  PDA +
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I  + K G ++ A E L+ M   G  PD   YN+++  + K    DQA  +++++ 
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK----------------------- 398
             G  PN  ++N +   L+  G   RA  +  EML K                       
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730

Query: 399 -------------GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
                        GI P+  TY SLI  L + G + EA  L+ DM      P V +Y+ +
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G   +  ++ + +V   M ++GC PNE TY +L       G+RA    L    V  H
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRR-----GFRAAGRALDLEAVKQH 844



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 241/506 (47%), Gaps = 61/506 (12%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           K DE+  F  SM+ NGC+PDV+  T LI  F +  +      ++    K   PDVF Y +
Sbjct: 70  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTS 129

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I G+CKA  ++   K+L+ + + G  PD   Y ++I  LC  G ++ A+++F+++ +  
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG 189

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           C    +T+  LI+A    G+ D+A +L  EM                  +CK G V +A 
Sbjct: 190 CLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEAN 249

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +  +++ ++      ++YN L+     +G+ ++G KL+ +M+     P++ TY+IL++  
Sbjct: 250 EIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            R  + +DA+++ +     G  P+A +Y  +I       R++ A  F D  +      D+
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DV 363

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIR---- 387
           ++Y T++     +   D+A E+FEKL   GC PNV +Y  +   L  +G   D ++    
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED 423

Query: 388 ----------------------------ALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
                                       A  +  +M+ KG  PD ITY +LI    +   
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +DEA  LL  M +    PT ++Y  I+ GFCK   INE+ EV+A M E+GC+P    +  
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 480 LIEGIGYGGWRAEAMELANALVSMHA 505
           L+    Y   +  A E    L  M A
Sbjct: 544 LLS---YYLSKGRAEEAYQVLTEMTA 566



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 228/484 (47%), Gaps = 49/484 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A K D+++     M + GC+P +V    +I       K ++A +    +   G EPDV 
Sbjct: 32  KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVI 91

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A+  LI GFCKA Q ++ + +L++   R F PDV  Y  +I   C  G +++ FK+ +++
Sbjct: 92  AFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEM 150

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L   C P    Y +LI                    +CK G V +A++    +   GC  
Sbjct: 151 LAAGCIPDAAAYFVLIDP------------------LCKLGRVDEAYELFERMRKSGCLG 192

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D +++  L+  L N GK +E  +L  EMI RG EP +     LI +LC+ GK ++A ++ 
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +    K +     +Y+ L+  YCK GR+D  ++ L  M+     PDI  YN ++A F + 
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML----------- 396
              D ALE+F+ LS  GC PN ++Y T+   L+ +     A     E L           
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKG 372

Query: 397 ------------------SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
                             + G  P+ + Y ++I  L + G +++ +    DM  +   PT
Sbjct: 373 LADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPT 432

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +Y ++I G CK + + ++ +V   M +KGC P+  TY  LI+G        EA +L +
Sbjct: 433 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 492

Query: 499 ALVS 502
            +++
Sbjct: 493 VMLT 496



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 227/504 (45%), Gaps = 47/504 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           FM LI+     GK DE+      M+  G +P + +   LI    +  K ++A  + + ++
Sbjct: 197 FMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV 256

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K       AYN+L+ G+CK  +++   K+L ++      PD+ TYNI++        ++
Sbjct: 257 AKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLD 316

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------GMCKK 207
            A ++F  L    CKP   TYT +IQ      + ++A    DE            G+   
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS 376

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             + +A +    L++ GC P+V++Y  ++  LL  G+ E+G K   +M      P   TY
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTY 436

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +++I  LC+     DA  V     +KG  PD  +Y  LI  + K  ++D A + LD M++
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496

Query: 328 DGCLPDIVNYNTILAAFCK-----------------------------------NGNADQ 352
            G  P  V Y +I+  FCK                                    G A++
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A ++  +++  GC P+V  Y ++   L+S+G    A  +   M+ KG  PD +TY ++I 
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
              + G V+ A  +L  M  +   P   +YN ++ G+ K  R++++  V   M   G KP
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
           N  T+ +L+ G+   G    A  L
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSL 700



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 40/333 (12%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+CK   + +A +    + S GC+P ++SYN ++  L ++ K +E  K    MI  G EP
Sbjct: 29  GLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEP 88

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V+ ++ LI   C+ G+ +    +L  A ++   PD + Y  +I  YCK G LD   + L
Sbjct: 89  DVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKIL 147

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M++ GC+PD   Y  ++   CK G  D+A E+FE++   GC  +  ++ T+  AL + 
Sbjct: 148 EEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNH 207

Query: 383 GDKIRALGMISEMLSKGIEP------------------DE-----------------ITY 407
           G    A  +  EM+ +G EP                  DE                 + Y
Sbjct: 208 GKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAY 267

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           NSL+   C+ G VD+ + LL+ M      P + +YNI++ GF +  R+++++E+   +  
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS 327

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            GCKPN  TY  +I+G+    + A+ ME A A 
Sbjct: 328 YGCKPNAATYTTIIQGL----YDAQRMEEAKAF 356



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 197/416 (47%), Gaps = 26/416 (6%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  +I    +A    ++    E MV  GC PD +  T LI  F +  K ++A +++++
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493

Query: 98  -LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            L K  EP    Y +++ GFCK + I  A +V+ ++R RG  P +  +  ++    S+G 
Sbjct: 494 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 553

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
            E A++V  ++    C P VI YT LI      G+  +A  + D M              
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                 K G V  A + +  +   G  PD  +YN L+   + + + ++   +   M++ G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLA 318
           ++PN VT+++L+  L +DGKT+ A  + +   EK  + P   SY  LI    K GR+  A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 MI  G +P+   Y +++ +  K G   +A ++ E +  +G  P+V +Y+ + + 
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           L  S     A  +  EM+ +G  P+E+TY  L     R G    A G  +D+E+ +
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL-----RRGF--RAAGRALDLEAVK 842



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 212/463 (45%), Gaps = 25/463 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G+ DE+    E M  +GC  D V    LI+      K ++A  +  E++
Sbjct: 162 YFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMI 221

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+  EP +   ++LI   CKA +++ AN++   + ++  +   V YN ++   C  G ++
Sbjct: 222 ERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              K+  Q++  +  P + TY IL+                   G  +   +  A +  +
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVA------------------GFSRANRLDDALELFK 323

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            L S GC+P+  +Y  +++ L +  + EE +    E +      +V++Y+ +I  L    
Sbjct: 324 LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSK 377

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A ++    K  G +P+  +Y  +I    K GR++  ++  + M    C+P    Y 
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   CK      A ++FE++   GC P+  +Y T+      +     A  ++  ML+K
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EP  +TY S++   C+  M++EA  ++  M      P +  +  ++  +    R  E+
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +VL  M  +GC P+   Y  LI+ +   G   EA  + ++++
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 600



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 48/82 (58%)

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           ++EA+  L +M +T   P V++ NI++ G CK R+I+++IE+   M   GC+P   +Y  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 480 LIEGIGYGGWRAEAMELANALV 501
           +I G+       EA +  N+++
Sbjct: 61  VISGLASIDKMDEAYKFFNSMI 82


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 228/456 (50%), Gaps = 17/456 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+   + G   ++      M   G  P     + ++K    +R+   AV + E +   G
Sbjct: 338 LIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG 397

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDVF YN LI   C+A+++  A  + DR++  G  P + TYN ++   C +G ++ A K
Sbjct: 398 LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVK 457

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           ++ ++  +  KP V+TY  L++  + +   D A  LLDEM                 G+C
Sbjct: 458 LYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC 517

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
               V +    ++S  S G  P +++YN ++   +  G       +  +M  +GL PN++
Sbjct: 518 MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+  I   CR G ++ A+ +L   + +GL PD  +Y+ LI+ +C++G +  A++ L  +
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           + DG  P+ V YN+++  +       +  + +E +   G   + S+Y T+       G+ 
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             AL + SEM++KG  PD  T+ +L   LCR G +D A  LL +M     RP V  YN++
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNML 757

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           I G+ +  ++ E+  +   M   G +P++TTY +L+
Sbjct: 758 INGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 217/483 (44%), Gaps = 26/483 (5%)

Query: 21  SAETRPNTHLLSF----DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           SA T    H+++     D+K      L+ R+ R     ++L     M   G + D  M  
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRT--DLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+    +E     AVR+  E+     +PD   Y   I+  CK      A ++L  ++  
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF     TY  M+  L   G +E A +V D++     K  VI  T L++           
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMR----------- 305

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C +  VG A    +     G  P  + Y +L+R    +G  ++  +L  +M
Sbjct: 306 -------GYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM 358

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             +GL P+    S+++  L  D + +DAV +     + GL PD ++Y+ LI  +C+  +L
Sbjct: 359 TGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKL 417

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+   D M   G  P I  YN++L  +CK G  D+A++++ ++   G  PNV +Y T+
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                +  D   A  ++ EM   G+  ++ TYN LI+ +C    V E  G+L    S  F
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF 537

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            PT+++YN II GF K   +  +  V   M EKG  PN  TY   I+G    G    A++
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597

Query: 496 LAN 498
           + N
Sbjct: 598 MLN 600



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 230/523 (43%), Gaps = 52/523 (9%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            + V    F  L+    + G  ++++   + M      PD  +    I    +     +A
Sbjct: 187 GYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRA 246

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +R++  +++ G +   F Y  ++    K  ++E A +V D +R  G   DV+    ++  
Sbjct: 247 LRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRG 306

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL------------ 198
            C R  + +A  +F + L+D   PT + Y +LI+     G T KA +L            
Sbjct: 307 YCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366

Query: 199 -----------------------LDEMG----------------MCKKGMVGQAFQFVRS 219
                                   +EM                  C+   + +A      
Sbjct: 367 TFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDR 426

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++  G +P + +YN LL      G  +E  KL +EM   G +PNVVTY  L+        
Sbjct: 427 MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKD 486

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++A  +L   K+ G++ + Y+Y+ LI+  C   R+      L   +S+G +P ++ YN+
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+  F K G    A  +++++ + G PPN+ +Y +       +G    AL M++++  +G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++PD + YN+LI+  C++G +  A+ LLV +      P  + YN +I G+     + E  
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   +M + G   + +TY  LI+G    G  A A+EL + +++
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMA 709



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 19/365 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G  DE++     M   G KP+VV    L++ +  ++  + A  +++ +++ G   + +
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+G C  +++   + +L    S GF P ++TYN +I      GM+ SAF V+ Q+
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P +ITYT  I                   G C+ G    A + +  +  RG QP
Sbjct: 568 REKGLPPNIITYTSFID------------------GYCRTGCSDMALKMLNDVRRRGLQP 609

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+++YN L+      G      +L+  ++  GL PN V Y+ LI+        ++     
Sbjct: 610 DIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFY 669

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            +  + G+  D  +Y  LI  + KDG +  A+E    M++ G +PD   +  +    C++
Sbjct: 670 ESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRS 729

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ D A ++ E++  +   PNV  YN + +          A  +  EML+ GI+PD+ TY
Sbjct: 730 GDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789

Query: 408 NSLIS 412
           + L+S
Sbjct: 790 DILVS 794



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 7/279 (2%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           +RG  PD+ S   LL         ++   L  EM  RG   +   +  L+S+  ++G  E
Sbjct: 150 ARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHE 209

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DAV +        + PD   Y   I+A CK G    A+  L  M   G       Y T++
Sbjct: 210 DAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               K G  ++AL + +++ D G   +V    T+        +   AL +  E L  GI 
Sbjct: 270 DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV 329

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P ++ Y  LI    + GM  +A  L   M      P+    ++++ G    RR  +++ +
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
              M + G  P+  TY  LI       W  +A +L  AL
Sbjct: 390 FEEMADSGL-PDVFTYNNLIH------WHCQAHKLREAL 421


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 236/476 (49%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV +G +P+ +    ++    +   +  A+ ++  +E
Sbjct: 181 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKME 240

Query: 100 K--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +  + +P+V  Y+A+I G  K  +   A+ +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 241 EMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRW 300

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY+ LI A + E +  +A +L DEM               
Sbjct: 301 SEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM--------------- 345

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+YN ++       + +  E +   M ++G  P+V T++ LI   C  
Sbjct: 346 ---LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGA 402

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D  ++L    E GL  D  +Y+ LI  +C  G L+ A++    MIS G  PDIV  
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +              G  P+V +YN + S L + G  +
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI P+ ITY+S+I+ LC+   +DEA  +   M S  F P V+++N ++
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   +  TY+ LI G    G    A+++   ++S
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 244/515 (47%), Gaps = 69/515 (13%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            ++++     MV +   P V+   KL+    +  + +  + + + +E+   P DV+++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI  FC  +++  A     ++   GF PDVVT++ ++  LC    +  A  +F Q+    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           C+P V+T+T L+     EG+  +A+ LLD M                 GMCK G    A 
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 215 QFVRSLES------------------------------------RGCQPDVISYNMLLRT 238
             +R +E                                     +G  PD+ +YN ++  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
             + G+W E ++L+ EM+ R + PNVVTYS LI++  ++ K  +A ++      +G+ P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ +I  +CK  RLD A      M + GC PD+  +NT++  +C     D   E+  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++++ G   + ++YNT+       GD   AL +  +M+S G+ PD +T N+L+  LC +G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 419 MVDEAVGLL-------VDMESTR----FRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            + +A+ +        +D++++R      P V +YNI+I G     +  E+ E+   M  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +G  PN  TY  +I G+       EA ++ +++ S
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS 568



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 192/375 (51%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ E+   ++ M+     P+VV  + LI  + +ERK  +A  +  E+L +   P+   
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN++I GFCK N+++ A  +   + ++G SPDV T+N +I   C    I+   ++  ++ 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ L  +M                 G+C  G + 
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  ++++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN +TYS +I+ LC+  + ++A  +  +   K  +PD  +++ L+S YCK GR+D  +E
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + D + Y T++  F K GN + AL+IF+++   G  P+  +  +M + LW
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLW 656

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 657 SKEELKRAVAMLEDL 671



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 204/421 (48%), Gaps = 29/421 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +I   ++ G+  ++      M   G  PD+     +I  F    + ++A R++ E+L
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+V  Y+ALI+ + K  +   A ++ D +  RG  P+ +TYN MI   C +  ++
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A  +F  +    C P V T+  LI       + D   +LL EM                
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM------ 255
            G C  G +  A    + + S G  PD+++ N LL  L + GK ++  ++   M      
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 256 --ISR---GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
              SR   G+EP+V TY+ILIS L  +GK  +A ++ +    +G+ P+  +Y  +I+  C
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K  RLD A +  D M S    PD+V +NT+++ +CK G  D  LE+F ++   G   +  
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y T+       G+   AL +  EM+S G+ PD IT  S+++ L     +  AV +L D+
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671

Query: 431 E 431
           +
Sbjct: 672 Q 672



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI      G  + +L   + M+++G  PD+V C  L+       K   A+ + + 
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++   +  RG  P+ +TY+
Sbjct: 485 MQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYS 544

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+  L+      G+ D  ++L  EMG  
Sbjct: 545 SMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG-- 602

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                            RG   D I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 603 ----------------RRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTI 646

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 647 TIRSMLTVLWSKEELKRAVAML 668



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ AI+    M+    LP ++++N ++    +    D  + +++K+     P +V S+N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +     S      AL    ++   G +PD +T+++L+  LC +  V EA+ L   M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            RP V+++  ++ G C+  R+ E++ +L  M E G +PN+ TY  +++G+   G    A+
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 495 ELANALVSMHAI 506
            L   +  M  I
Sbjct: 234 NLLRKMEEMSHI 245



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ + S+M+     P  I +N L+  + R    D  + L   ME  +    V S+NI+I 
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
            FC   ++  ++     + + G +P+  T+  L+ G+      +EA++L + +   + ++
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVT 180

Query: 508 RDTF 511
             T 
Sbjct: 181 FTTL 184


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 234/463 (50%), Gaps = 19/463 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           +F K++    +A ++  +L   + M  NG KPD + C  L+  F Q      +  V  +I
Sbjct: 60  EFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKI 119

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K   PD   +  LI G C   ++  A    D++ ++GF  D V+Y  +I  LC  G  
Sbjct: 120 LKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGET 179

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A ++  ++     +P V+ Y+ +I +                  MCK  +V  AF   
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDS------------------MCKDKLVNDAFDLY 221

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+   PDV++Y+ L+     +GK +    L   MIS  + PNV T+SILI   C++
Sbjct: 222 CEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKE 281

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK  +A +VL    +K +  D  +Y+ L+  YC   +++ A    + M   G  PD+ +Y
Sbjct: 282 GKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSY 341

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++  FCK    D+A+++FE++      PNV +YN++   L  SG    AL ++ EM  
Sbjct: 342 SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G   + ITYNS++  +C++  VD+A+ LL  ++    +P + +Y ++I G CK  R+++
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +V   +  KG  PN  TY  LI G    G+  E + + + +
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 216/431 (50%), Gaps = 19/431 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK     G+  ++LYF + +VA G + D V    LI    +  ++  AV+++  ++
Sbjct: 131 FTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD 190

Query: 100 -KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+V  Y+ +I   CK   +  A  +   + S+  SPDVVTY+ +I   C  G ++
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLK 250

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++++ DN  P V T++ILI                   G CK+G V +A   + 
Sbjct: 251 YAVDLFNRMISDNINPNVYTFSILID------------------GFCKEGKVREAKNVLA 292

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +  + DV++YN L+     + +  + + L   M  RG+ P+V +YSI+I+  C+  
Sbjct: 293 VMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIK 352

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A+ +      K + P+  +Y+ L+   CK GR   A+E +D M   G   +I+ YN
Sbjct: 353 MVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYN 412

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +IL A CKN + D+A+ +  K+ + G  P++ +Y  + + L   G    A  +  ++L K
Sbjct: 413 SILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVK 472

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+  TY SLI+  C  G  DE + +L  M+     P  I+Y I+I    +    +++
Sbjct: 473 GYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKA 532

Query: 459 IEVLAAMFEKG 469
            ++L  M  +G
Sbjct: 533 EKLLREMIARG 543



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 198/386 (51%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    R G+   ++  +  +     +P+VVM + +I    +++  N A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ K   PDV  Y++LISGFC   +++ A  + +R+ S   +P+V T++I+I   
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  A  V   +++ N K  V+TY  L+    L  Q +KA  L + M         
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK  MV +A +    +  +   P+V++YN L+  L   G+     +L+ E
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG   N++TY+ ++ ++C++   + A+ +L   KEKG+ PD ++Y  LI+  CK GR
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A +  + ++  G  P+I  Y +++  FC  G  D+ L +  K+ D GC PN  +Y  
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEI 518

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  +L+   +  +A  ++ EM+++G+
Sbjct: 519 LIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 156/300 (52%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFA 108
            GK   ++     M+++   P+V   + LI  F +E K  +A  V+ ++ +K  + DV  
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+L+ G+C   Q+  A  + + +  RG +PDV +Y+IMI   C   M++ A K+F+++ 
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                P V+TY  L+      G+T  A++L+DEM                  +CK   V 
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +  ++ +G QPD+ +Y +L+  L  +G+ ++ +K+  +++ +G  PN+ TY+ LI
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C  G  ++ + +L   K+ G  P+A +Y+ LI +  +    D A + L  MI+ G L
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 136/268 (50%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F R L      P  I +  +L +LL   +++    L  +M   G++P+ +T ++L++   
Sbjct: 45  FNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFS 104

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  + +  V     +KG  PDA ++  LI   C  G +  A+ F D +++ G   D V
Sbjct: 105 QLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQV 164

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y T++   C+ G    A+++  ++      PNV  Y+T+  ++        A  +  EM
Sbjct: 165 SYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEM 224

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +SK I PD +TY+SLIS  C  G +  AV L   M S    P V +++I+I GFCK  ++
Sbjct: 225 VSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKV 284

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  VLA M +K  K +  TY  L++G
Sbjct: 285 REAKNVLAVMMKKNVKLDVVTYNSLMDG 312



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 115/232 (49%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P  + +  ++ SL +  + + A+ + +  +  G+ PD  + + L++ + + G +  +   
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              ++  G  PD V +  ++   C  G   +AL   +K+   G   +  SY T+ + L  
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G+   A+ ++  +  K + P+ + Y+++I  +C+D +V++A  L  +M S R  P V++
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           Y+ +I GFC   ++  ++++   M      PN  T+ +LI+G    G   EA
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 103/215 (47%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R   +    P A  +  ++ +  K  +   A+     M  +G  PD +  N ++  F + 
Sbjct: 47  RLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQL 106

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+   +  +F K+   G  P+  ++  +   L   G+  +AL    +++++G + D+++Y
Sbjct: 107 GHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY 166

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +LI+ LCR G    AV LL  ++    RP V+ Y+ II   CK + +N++ ++   M  
Sbjct: 167 GTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS 226

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K   P+  TY  LI G    G    A++L N ++S
Sbjct: 227 KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMIS 261


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 225/445 (50%), Gaps = 18/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  ++    + G   ES   +  ++  G   +   C   I+   ++ +  +AV ++E + 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y  PDV  YN L+ G CK ++++ A + L R+ ++G  PD  TYN +I   C  GM++ 
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++    +     P  +TY  LI     EG  ++A++L +E                  
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA----------------- 376

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +++  +PD++ YN L++ L   G      ++M EM+  G  P++ TY+I+I+ LC+ G 
Sbjct: 377 -QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA  V+  A  KG  PD ++++ LI  YCK  +LD A++ ++ M + G  PD++ YN+
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L   CK G A +  E FE++   GC PN  +YN +            A G+I  M   G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD +++N+LI   CR+G +D A  L   ++   +  T  ++NI+I  +     +  + 
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI 484
           ++   M  KG KP+  TY +L++G+
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGL 640



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 229/447 (51%), Gaps = 19/447 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+ +E++  +E M A    PDVV    L++   ++ K  +A + +  +   G  PD F Y
Sbjct: 260 GRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTY 318

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I G+CK+  ++ A ++L     +GF PD VTY  +I  LC+ G IE A ++F++   
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            + KP ++ Y  L++    +G    A+++++EM                 G+CK G +  
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +     +G  PDV ++N L+       K +   +L+  M + G+ P+V+TY+ +++
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ GK ++  +       KG  P+A +Y+ LI  +CK  +L+ A   +  M  DG +P
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D V++NT++  FC+NG+ D A  +F+KL + G      ++N +  A  S  +   A  + 
Sbjct: 559 DAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIF 618

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+SKG +PD  TY  L+  LC+   VD A   L +M S  F P++ ++  ++      
Sbjct: 619 GEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMN 678

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVL 479
            R++E++ ++  M   G  P     +L
Sbjct: 679 HRVSEAVAIIHIMVRMGVVPEVVDTIL 705



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 17/456 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           A   D++      M+A G  PD    T  +K F    + + A+R++  L + G +    A
Sbjct: 119 AAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAA 178

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++ G         A  + D +  R   PDV T+N ++ +LC +G +  +  +  ++L
Sbjct: 179 YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVL 238

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----------------MCKKGMVGQ 212
           +        T  I I+    +G+ ++A+ L++ MG                +CK   V +
Sbjct: 239 KRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQE 298

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q++  + ++GC PD  +YN ++      G  +E  +L+ + + +G  P+ VTY  LI+
Sbjct: 299 AAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLIN 358

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC +G  E A+++   A+ K L PD   Y+ L+   C+ G +  A++ ++ M+ +GC P
Sbjct: 359 GLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP 418

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DI  YN I+   CK GN   A  +       G  P+V ++NT+            AL ++
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 478

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             M + GI PD ITYNS+++ LC+ G   E      +M     RP  I+YNI+I  FCK 
Sbjct: 479 ERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKI 538

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            ++ E+  V+  M + G  P+  ++  LI G    G
Sbjct: 539 NQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 227/476 (47%), Gaps = 22/476 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV--MCTKLIKKFFQERKSNKAVRVMEI 97
           +  LI+    AG+ D+    + S  ++   PD +  +    I+ + +  +   AV   E 
Sbjct: 38  YRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ +   P   AYNA++     A   + A+KV  R+ + G +PD  T+ + + S C  G 
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A ++   L    C      Y  +++     G    A  L DEM              
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C+KG V ++   +  +  RG   +  + N+ +R L   G+ EE   L+  M +  
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY- 275

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + P+VVTY+ L+  LC+D K ++A   L     +G  PD ++Y+ +I  YCK G L  A 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E L   +  G +PD V Y +++   C  G+ ++ALE+F +       P++  YN++   L
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G  + AL +++EM+ +G  PD  TYN +I+ LC+ G + +A  ++ D     + P V
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            ++N +I G+CK  +++ +++++  M+  G  P+  TY  ++ G+   G   E  E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 1/293 (0%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A      ++   C P   +YN ++  L+N    ++  K+   M++ G+ P+  
Sbjct: 83  RAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDAR 142

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+++ + S C  G+   A+ +LR+  E+G      +Y  ++      G    A    D M
Sbjct: 143 THTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM 202

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +     PD+  +N +L A C+ G+  ++  +  K+   G   N  + N     L   G  
Sbjct: 203 LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRL 262

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ ++ E +   + PD +TYN+L+  LC+D  V EA   L  M +    P   +YN I
Sbjct: 263 EEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           I G+CK+  + E+ E+L     KG  P+  TY  LI G+   G    A+EL N
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN 374



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 37/304 (12%)

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT--YSILISSLCRDGKTEDAVDV 286
           + +Y  L+R L++ G+ ++ +  +    S  L P+ +   Y   I +  R G+   AVD 
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                     P A +Y+ ++ A       D A +    M++ G  PD   +   L +FC 
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    AL +   LS+ GC    ++Y T+   L++ G    A  +  EML + + PD  T
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 407 YNSLISCLCRDGMVDEAVGLLVD-----MESTRFR------------------------- 436
           +N+++  LC+ G V E+  LL       M + +F                          
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 437 ----PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P V++YN ++ G CK  ++ E+ + L  M  +GC P++ TY  +I+G    G   E
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 493 AMEL 496
           A EL
Sbjct: 334 ATEL 337


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 242/482 (50%), Gaps = 55/482 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +A K  E++  +  M A GC P+ V CT L+    ++ + ++A+ ++E ++K G
Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + DV  Y  LISGFC    ++   ++ D +  +G S +VVTY+ ++  LC  G  + A 
Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V + +      P V+TYT LI     +G+   AM LL+ M                 G+
Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 364

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG--LEP 262
           CK+G+V  AF+ +R +  +G + DV++YN L++ L + GK +E  KL   M      LEP
Sbjct: 365 CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 424

Query: 263 NVVTYSILISSLCRDGKTEDAVDV-----------------------LRAAKEK------ 293
           NV T+++LI  LC++G+   AV +                       L+A K K      
Sbjct: 425 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 484

Query: 294 ------GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 G  P++++Y  LI  +CK   L++A      M + G  P + +YNT++A+ CK 
Sbjct: 485 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 544

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ +QA  +F+++ +  C P++ S+NTM      +GD      +  +M+  G+ PD +T+
Sbjct: 545 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 604

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           ++LI+ L + G +DEA   L  M ++ F P  + Y+ ++ G        E I +L  M  
Sbjct: 605 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 664

Query: 468 KG 469
           KG
Sbjct: 665 KG 666



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 21/464 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   R G   E++  I  M      PD+V    LI    + +K  +AV ++  +E  G
Sbjct: 150 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 209

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+      L+ G CK  +++ A ++L+ ++ +GF  DVV Y  +I   C+ G ++   
Sbjct: 210 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++FD++L       V+TY+ L+                   G+C+ G   +A   + ++ 
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVH------------------GLCRLGQWKEANTVLNAMA 311

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  PDV++Y  L+  L   G+      L+  M+ +G EP+ VTY++L+S LC++G   
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCL-PDIVNYNT 339
           DA  +LR   EKG   D  +Y+ L+   C  G++D A++  + M  ++ CL P++  +N 
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK G   +A++I  K+   G   N+ +YN +      +G    A+ +  ++L  G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             P+  TY+ LI   C+  M++ A GL  +M +    P +  YN ++   CK   + ++ 
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +   M    C+P+  ++  +I+G    G      EL   +V M
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 208/418 (49%), Gaps = 21/418 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P     + LI+ F   +K      V+ ++ K G   +VF  N ++ G C+   +  A  +
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           +  +  +  SPD+V+YN +I  LC    ++ A  +  ++    C P  +T T L+     
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD---- 222

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G + +A + + +++ +G   DV+ Y  L+    N G  + G
Sbjct: 223 --------------GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 268

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           ++L  EM+ +G+  NVVTYS L+  LCR G+ ++A  VL A  E G+ PD  +Y  LI  
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            CKDGR   A++ L+ M+  G  P  V YN +L+  CK G    A +I   + + G   +
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGMVDEAVGL 426
           V +YNT+   L   G    AL + + M      +EP+  T+N LI  LC++G + +AV +
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 448

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              M        +++YN+++ G  K  +I E++E+   + + G  PN  TY +LI+G 
Sbjct: 449 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 20/388 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVF 107
           R G++ E+   + +M  +G  PDVV  T LI    ++ ++  A+ ++ ++ EK  EP   
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+SG CK   +  A K+L  +  +G   DVVTYN ++  LC +G ++ A K+F+ +
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 168 L-RDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
              +NC +P V T+ +LI     EG+  KA+K+  +M                 G  K G
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A +  + +   G  P+  +Y++L+     M      + L  EM + GL P +  Y+
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L++SLC++G  E A  + +        PD  S++ +I    K G      E    M+  
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD + ++T++    K G  D+A    E++   G  P+   Y+++   L S GD    
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCR 416
           + ++ +M +KG   D    +++++CLC 
Sbjct: 656 INLLHQMAAKGTVLDRKIVSTILTCLCH 683



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 185/362 (51%), Gaps = 18/362 (4%)

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P   T N ++ +L        AF V+ ++   +  P+  + + LI+    + Q       
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIEC-FADAQKP----- 125

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
             ++G    G+VG   +       RG   +V   N++L+ L   G   E   L+ EM  +
Sbjct: 126 --QLGF---GVVGLVLK-------RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            + P++V+Y+ LI+ LC+  K ++AV +L   +  G  P++ +   L+   CKDGR+D A
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +E L+ M   G   D+V Y T+++ FC NGN D+  E+F+++   G   NV +Y+ +   
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    A  +++ M   GI PD +TY  LI  LC+DG    A+ LL  M      P+
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
            ++YN+++ G CK   + ++ ++L  M EKG K +  TY  L++G+   G   EA++L N
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 499 AL 500
           ++
Sbjct: 414 SM 415



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 149/291 (51%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G AF   R +      P   S + L+    +  K + G  ++  ++ RG   NV   +I+
Sbjct: 91  GLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIV 150

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LCR+G   +A+ ++R    K ++PD  SY+ LI+  CK  +L  A+  L  M + GC
Sbjct: 151 LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGC 210

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V   T++   CK+G  D+A+E+ E +   G   +V  Y T+ S   ++G+  R   
Sbjct: 211 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKE 270

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EML KGI  + +TY+ L+  LCR G   EA  +L  M      P V++Y  +I G C
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 330

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           K  R   ++++L  M EKG +P+  TY +L+ G+   G   +A ++   ++
Sbjct: 331 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 381


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 246/490 (50%), Gaps = 33/490 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI     A K DE+L   + ++ + C+ D V  + LI    +ER+  +A  + + +E
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178

Query: 100 KYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
              +    PDV  Y ALI GFCK+  +E A K+L  +  R   P+VVTY+ ++  LC  G
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++ A  +F ++    C P V+TYT LI       + D A  L+DEM             
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-IS 257
               G C+ G + +A Q  + + ++ C PD I+Y  L+R   N  + EE   L+  M  +
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G++P+VVTYSI+++   R  +  +A + ++    + + P+A +Y  LI   CK GR++ 
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+E L  +      PD+V Y  ++   C     ++AL + E++ +    P+V ++N++  
Sbjct: 419 AMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIG 474

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           AL   GD   A  ++  M + G+EP  +TY +L+    R G ++ A  L   M     + 
Sbjct: 475 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS 534

Query: 438 TVIS-------YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           +  +       ++ +I G CK R I++++ V+  +  + C+P E   + +++G+   G  
Sbjct: 535 SSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRT 594

Query: 491 AEAMELANAL 500
            EA +L N++
Sbjct: 595 EEAGKLINSI 604



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 239/463 (51%), Gaps = 31/463 (6%)

Query: 49  RAGKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           + G+ D +   +  MV  +G  PDVV  T ++    ++ K ++A  ++  ++  G EPD 
Sbjct: 57  KQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 116

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F ++ALI+G+C A +++ A K+   + +     D V+ + +I  LC    I  A+++F +
Sbjct: 117 FTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQE 176

Query: 167 L-LRDN--CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           + +R++   KP V+TYT LI                   G CK G + +A + +  +E R
Sbjct: 177 MEMREDGAWKPDVVTYTALID------------------GFCKSGNLEKAMKMLGVMEGR 218

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C P+V++Y+ LL  L   G  ++   L   M S+G  PNVVTY+ LI  LC   K + A
Sbjct: 219 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 278

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             ++          D  SY+ L+  YC+ GR++ A +    M +  CLPD + Y  ++  
Sbjct: 279 RLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG 338

Query: 344 FCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           FC     ++A  + E + +  G  P+V +Y+ + +    +   + A   I EM+++ + P
Sbjct: 339 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TY+SLI  LC+ G V+ A+ +L +++    +P V++Y I+I G C T R  E++ +L
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLL 454

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
             M  K  +P+  T+  +I  +   G   EA +L   LV+M A
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL---LVAMAA 494



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 215/411 (52%), Gaps = 24/411 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGM 156
           + ++  P+   YN +++G CKA     A +VL  +R  +  +PD+VTY+ +I   C +G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 157 IESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           ++ A ++  +++ RD   P V+TYT ++                   G+C+ G + +A +
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVD------------------GLCRDGKMDRACE 102

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            VR ++ +G +PD  +++ L+    N  K +E  KL  E+++     + V+ S LI+ LC
Sbjct: 103 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLC 162

Query: 276 RDGKTEDAVDVLRAA--KEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           R+ +  +A ++ +    +E G   PD  +Y  LI  +CK G L+ A++ L  M    C+P
Sbjct: 163 RERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 222

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V Y+++L   CK G+ DQAL++F +++  GC PNV +Y T+   L ++     A  ++
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM +     D ++YN+L+   CR G ++EA  L  +M +    P  I+Y  ++ GFC  
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342

Query: 453 RRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            R+ E+  +L  M    G  P+  TY +++ G        EA E    +++
Sbjct: 343 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 393



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 179/378 (47%), Gaps = 30/378 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           +AG  D++L     M + GC P+VV  T LI       K + A  +M+ +     P D  
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA-FKVFDQ 166
           +YNAL+ G+C+  +IE A ++   + ++   PD +TY  ++   C+   +E A F + + 
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
                  P V+TY+I++       +  +A + + EM                 G+CK G 
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A + +++++    +PDV++Y +++  L    + EE   L+ EM+++ +EP+V T++ 
Sbjct: 416 VNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM---- 325
           +I +LCR G  ++A  +L A    GL P   +Y  L+  + + GR+++A E  + M    
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531

Query: 326 ---ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
               S   L     ++ ++   CK    D+A+ + E+L    C P       +   L  +
Sbjct: 532 KKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 591

Query: 383 GDKIRALGMISEMLSKGI 400
           G    A  +I+ +   G+
Sbjct: 592 GRTEEAGKLINSISKVGL 609


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 206/366 (56%), Gaps = 18/366 (4%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           ++DR+ ++G  PD+VTY +++  LC RG  + AF + +++ +   +P V+ Y  +I    
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID--- 59

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK   +  A    + +E++G +P+V++Y+ L+  L N G+W +
Sbjct: 60  ---------------GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 104

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L+++MI R + P+V T+S LI +  ++GK  +A  +     ++ + P   +Y  LI+
Sbjct: 105 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 164

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            +C   RLD A +  ++M+S  C PD+V YNT++  FCK    ++ +E+F ++S  G   
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  +YN +   L+ +GD   A  +  EM+S G+ P+ +TYN+L+  LC++G +++A+ + 
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 284

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             ++ ++  PT+ +YNI+I G CK  ++ +  ++   +  KG KP+   Y  +I G    
Sbjct: 285 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344

Query: 488 GWRAEA 493
           G + EA
Sbjct: 345 GSKEEA 350



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 208/423 (49%), Gaps = 19/423 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            I+ MVA GC+PD+V    ++    +   ++ A  ++  +E+   EP V  YN +I G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K   ++ A  +   + ++G  P+VVTY+ +I  LC+ G    A ++   ++     P V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           T++ LI A + EG+  +A KL DEM                    R   P +++Y+ L+ 
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEM------------------VKRSIDPSIVTYSSLIN 164

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                 + +E +++   M+S+   P+VVTY+ LI   C+  + E+ ++V R   ++GL  
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI    + G  D+A E    M+SDG  P+I+ YNT+L   CKNG  ++A+ +F
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 284

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           E L      P + +YN M   +  +G       +   +  KG++PD + YN++IS  CR 
Sbjct: 285 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  +EA  L  +M+     P    YN +I    +      S E++  M   G   + +T 
Sbjct: 345 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 404

Query: 478 VLL 480
            L+
Sbjct: 405 GLV 407



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 195/371 (52%), Gaps = 20/371 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           D++L   + M   G +P+VV  + LI       + + A R++ +++E+   PDVF ++AL
Sbjct: 68  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 127

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I  F K  ++  A K+ D +  R   P +VTY+ +I   C    ++ A ++F+ ++  +C
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P V+TY  LI+                  G CK   V +  +  R +  RG   + ++Y
Sbjct: 188 FPDVVTYNTLIK------------------GFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+L++ L   G  +  +++  EM+S G+ PN++TY+ L+  LC++GK E A+ V    + 
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
             + P  Y+Y+ +I   CK G+++   +    +   G  PD+V YNT+++ FC+ G+ ++
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 349

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F+++ + G  PN   YNT+  A    GD+  +  +I EM S G   D  T   L++
Sbjct: 350 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVT 408

Query: 413 CLCRDGMVDEA 423
            +  DG +D++
Sbjct: 409 NMLHDGRLDKS 419



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 22/295 (7%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S D     +  LI       + DE+    E MV+  C PDVV    LIK F + ++  + 
Sbjct: 151 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 210

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + V   + + G   +   YN LI G  +A   ++A ++   + S G  P+++TYN ++  
Sbjct: 211 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 270

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC  G +E A  VF+ L R   +PT+ TY I+I+                  GMCK G V
Sbjct: 271 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE------------------GMCKAGKV 312

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
              +    +L  +G +PDV++YN ++      G  EE + L  EM   G  PN   Y+ L
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 372

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           I +  RDG  E + ++++  +  G   DA S   L++    DGRLD +  FLD +
Sbjct: 373 IRARLRDGDREASAELIKEMRSCGFAGDA-STIGLVTNMLHDGRLDKS--FLDML 424



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 8/219 (3%)

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +  +D M++ GC PD+V Y  ++   CK G+ D A  +  K+      P V  YNT+   
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L        AL +  EM +KGI P+ +TY+SLISCLC  G   +A  LL DM   +  P 
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V +++ +I  F K  ++ E+ ++   M ++   P+  TY  LI G        EA ++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 499 ALVSMH----AISRDT----FKRLNRTFPLLDVYKEISH 529
            +VS H     ++ +T    F +  R    ++V++E+S 
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 219


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 243/465 (52%), Gaps = 19/465 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  PDVV    +I    + +  +KA+ V+  + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN+++ G+C + Q + A   L ++RS G  PDVVTY++++  LC  G   
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 364

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  PD   +++L+    N GK ++   + ++M  +GL PN VTY  +I  LC+ G
Sbjct: 365 N----GIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++GL+P    Y+ LI   C   + + A E +  M+  G   + + +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++FE +  +G  PNV +YNT+ +    +G    A+ ++S M+S 
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ +TY++LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            E+   + E G +   +TY +++ G+       +A+++   L  M
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 228/459 (49%), Gaps = 26/459 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + +++  G + D +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI--VLRRMTELGCIP 156

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           +VF+YN L+ G C  N+ + A ++L  +   R  G  PDVV+Y  +I      G  + A+
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             + ++L     P V+TY  +I A       DKAM++L+ M                 G 
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G   +A  F++ + S G +PDV++Y++L+  L   G+  E  K+   M  RGL+P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY  L+      G   +   +L      G+ PD Y +  LI AY   G++D A+     
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+ V Y  ++   CK+G  + A+  FE++ D G  P    YN++   L +   
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA  +I EML +GI  + I +NS+I   C++G V E+  L   M     +P VI+YN 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I G+C   +++E++++L+ M   G KPN  TY  LI G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 16/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           PD+  Y  LI   C+A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++    C P V +Y IL++    E ++ +A++LL  M   + G              
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG-------------- 190

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV+SY  ++      G  ++      EM+ RG+ P+VVTY+ +I++LC+    + 
Sbjct: 191 -GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK 249

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL    + G+ PD  +Y+ ++  YC  G+   AI FL  M SDG  PD+V Y+ ++ 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A +IF+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   ++ LI      G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G  P    Y  LI G+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGL 451



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 154/284 (54%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           PD+ +Y +L+      G+ + G   +  +I +G   + + ++ L+  LC D +T DA+D 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E G  P+ +SY+ L+   C + R   A+E L  M  D   G  PD+V+Y T++ 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D G  P+V +YN++ +AL  +    +A+ +++ M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYNS++   C  G   EA+G L  M S    P V++Y++++   CK  R  E+ ++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G KP  TTY  L++G    G          ALV MH +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKG----------ALVEMHGL 358



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 21/376 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK D+++     M   G  P+ V    +I    +  +   A+   E + 
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P    YN+LI G C  N+ E A +++  +  RG   + + +N +I S C  G + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            + K+F+ ++R   KP VITY  LI    L G+ D+AMKLL  M                
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK   +  A    + +ES G  PD+I+YN++L+ L    +    ++L   +   G +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             + TY+I++  LC++  T+DA+ + +      L  +A +++ +I A  K GR D A + 
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
                S+G +P+   Y  +       G  ++  ++F  + D GC  +    N +   L  
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 382 SGDKIRA---LGMISE 394
            G+  RA   L MI E
Sbjct: 734 RGEITRAGTYLSMIDE 749



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + RD          R A+     +TPD  +Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            LI   C+ GRLDL                AI F                    L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
            GC+P++ +YN +L   C    + +ALE+   ++D    G PP+V SY T+ +  +  GD
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML +GI PD +TYNS+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +P+  TY LL++ +   G   EA ++ +++
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 18/243 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK DE++  +  MV+ G KP+ V  + LI  + +  +   A+ + + +E  G  PD+  
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN ++ G  +  +   A ++  R+   G   ++ TYNI++  LC   + + A ++F  L 
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-- 214
             + K    T+ I+I A +  G+ D+A  L                 +  + ++GQ    
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 215 ---QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
              Q   S+E  GC  D    N ++R LL  G+       ++ +  +       T S+ I
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763

Query: 272 SSL 274
             L
Sbjct: 764 DLL 766


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 249/513 (48%), Gaps = 27/513 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  S+ +  NT+ L+          ++    +A +FD+    I  M      PDVV   
Sbjct: 145 RLVFSSNSEVNTYTLNI---------MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHN 195

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            ++   F+   +  A+ +++ +   G +P +  YN+++ G C++   + A +V   +   
Sbjct: 196 VMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF 255

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G +PDV ++ I+IG  C  G IE A K++ ++     KP +++++ LI      G+ D A
Sbjct: 256 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 315

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           M  L EM                 G C+ G++  A +    +   GC PDV++YN LL  
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +  + E L+ EM  RG+ P++ T++ LI   C +GK + A+ +      + L PD
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ LI   C+ G LD A +  D M S    P+ V Y+ ++ + C+ G  + A    +
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + G  PN+ +YN++      SG+  +    + +M+   + PD ITYN+LI    ++ 
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + +A  LL  ME  + +P V++YN++I GF     + E+  +   M  KG +P+  TY+
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            +I G    G   EA +L + ++       D F
Sbjct: 616 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 139/351 (39%), Gaps = 46/351 (13%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM----GMCKKGMVGQAFQFVRSLESRGCQPD 228
           KP          A    G+  +   LL  M    G C++       + V SL      P 
Sbjct: 33  KPATADLAAAATAAAAAGRASECQSLLLRMSRRRGACRR-------EIVSSLLGSSPTPQ 85

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              +++L+RT     K  E  +    ++   +       + L+++L R G    A D  R
Sbjct: 86  PRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYR 145

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN------------ 336
                    + Y+ + ++  YCK    D     +  M      PD+V             
Sbjct: 146 LVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205

Query: 337 -----------------------YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
                                  YN++L   C++G  D+A E+F+++ D G  P+V S+ 
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +       G+   AL +  EM  +GI+PD ++++ LI    R G +D A+  L +M   
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              P  + Y ++I GFC+   +++++ V   M   GC P+  TY  L+ G+
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 119/245 (48%)

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           ++++ ++     P    + +LI +  +  K  +A +  R   +  +   A + + L++A 
Sbjct: 72  EIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAAL 131

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            + G   LA +    + S     +    N ++  +CK    D+   +  ++      P+V
Sbjct: 132 SRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 191

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            ++N M  A + +GD   A+ ++  M+SKG++P  +TYNS++  LCR GM D+A  +  +
Sbjct: 192 VTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M+     P V S+ I+I GFC+   I E++++   M  +G KP+  ++  LI      G 
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311

Query: 490 RAEAM 494
              AM
Sbjct: 312 MDHAM 316


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 223/441 (50%), Gaps = 29/441 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F   I+   + G  D ++  ++ M   GC PDVV+ + L+  F ++ + + A+ ++ 
Sbjct: 247 EVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLN 306

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +    +P+   YNA + G C A + E   +++  +  +   P+  T++++   LC  G+
Sbjct: 307 GM--LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGL 364

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A +V +Q+ +  C+P  + Y  LI +   +G+ D A+KLL+ M              
Sbjct: 365 VDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP------------- 411

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C PDVIS+N  L+ L    +W++ E+L+ +M+        +T++ILI SLC+
Sbjct: 412 --------CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+  +A++V     + G TPD  +Y  LI+   + G ++ AIE    M    C PDI  
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFG 520

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN +L   C+    + A E+   ++   CPPN  ++N + ++L   G   RA+ +  +M 
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  PD  TYN+LI+     G +D+A  LL  M     +P  +SYN  + G C+  R  
Sbjct: 581 KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSC---KPDAVSYNSALKGLCRAERWK 637

Query: 457 ESIEVLAAMFEKGCKPNETTY 477
           E+ EV+A M    C PNE T+
Sbjct: 638 EAEEVVAEMLRMKCPPNEVTF 658



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 230/473 (48%), Gaps = 57/473 (12%)

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK---- 127
           VV C  LIKK   +R+   A RV++ L+  G  D  ++N L++G+C+  ++  A +    
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 128 ---------------------------VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
                                       L  + S   +PD  TYN ++  LC     E A
Sbjct: 172 AGLSGAANVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDA 231

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
             +  +++R++C P  +T+   I+A    G  D+A++LLD M                 G
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             ++G V  A + +  +    C+P+ I YN  L+ L    +WE+  +L+ EM+ +   PN
Sbjct: 292 FSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPN 348

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             T+S+L S LC++G  + A++VL    + G  PDA  Y+ LI ++ + GR+D A++ L+
Sbjct: 349 EATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLN 408

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M    C PD++++N  L   C+    D A E+  ++    CP    ++N +  +L  +G
Sbjct: 409 SM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNG 465

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A+ +  +M   G  PD +TY+SLI+ L   G+V+ A+ L   M     +P +  YN
Sbjct: 466 RVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPC---KPDIFGYN 522

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++ G C+  R  ++ E+++ M  K C PNE T+ +LI  +   G    A+E+
Sbjct: 523 AVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEV 575



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 5/197 (2%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI   C   RL  A   LD + + G   D V++NT++A +C++G    A E     + + 
Sbjct: 118 LIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADA-ERLLAAAGLS 175

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              NV +Y T+ +    SG    AL +I+ M    + PD  TYN+++  LC     ++A 
Sbjct: 176 GAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWEDAE 232

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L+ +M      P  +++   I  FC+   ++ ++++L  M + GC P+   Y  L+ G 
Sbjct: 233 ALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGF 292

Query: 485 GYGGWRAEAMELANALV 501
              G   +A+EL N ++
Sbjct: 293 SEQGRVDDAIELLNGML 309


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 229/459 (49%), Gaps = 26/459 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + +++  G + D +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI--VLRRMTELGCIP 156

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           +VF+YN L+ G C  N+ + A ++L  +   R  G  PDVV+Y  +I      G  + A+
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             + ++L     P V+TY  +I A       DKAM++L+ M                 G 
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G   +A  F++ + S G +PDV++Y++L+  L   G+  E  K+   M  RGL+P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY  L+      G   +   +L      G+ PD Y +  LI AY K G++D A+     
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+ V Y  ++   CK+G  + A+  FE++ D G  P    YN++   L +   
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA  +I EML +GI  + I +NS+I   C++G V E+  L   M     +P VI+YN 
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I G+C   +++E++++L+ M   G KPN  TY  LI G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 242/465 (52%), Gaps = 19/465 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  PDVV    +I    + +  +KA+ V+  + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN+++ G+C + Q + A   L ++RS G  PDVVTY++++  LC  G   
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 364

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  PD   +++L+      GK ++   + ++M  +GL PN VTY  +I  LC+ G
Sbjct: 365 N----GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++GL+P    Y+ LI   C   + + A E +  M+  G   + + +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++FE +  +G  PNV +YNT+ +    +G    A+ ++S M+S 
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P+ +TY++LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            E+   + E G +   +TY +++ G+       +A+++   L  M
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 228/443 (51%), Gaps = 19/443 (4%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALI 113
           E L+ +      G  PDVV  T +I  FF+E  S+KA     E+L++   PDV  YN++I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           +  CKA  ++ A +VL+ +   G  PD +TYN ++   CS G  + A     ++  D  +
Sbjct: 239 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE 298

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V+TY++L+                    +CK G   +A +   S+  RG +P++ +Y 
Sbjct: 299 PDVVTYSLLMDY------------------LCKNGRCMEARKIFDSMTKRGLKPEITTYG 340

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            LL+     G   E   L+  M+  G+ P+   +SILI +  + GK + A+ V    +++
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           GL P+A +Y  +I   CK GR++ A+ + + MI +G  P  + YN+++   C     ++A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            E+  ++ D G   N   +N++  +    G  I +  +   M+  G++P+ ITYN+LI+ 
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            C  G +DEA+ LL  M S   +P  ++Y+ +I G+CK  R+ +++ +   M   G  P+
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580

Query: 474 ETTYVLLIEGIGYGGWRAEAMEL 496
             TY ++++G+      A A EL
Sbjct: 581 IITYNIILQGLFQTRRTAAAKEL 603



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 16/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           PD+  Y  LI   C+A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++    C P V +Y IL++    E ++ +A++LL  M   + G              
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG-------------- 190

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV+SY  ++      G  ++      EM+ RG+ P+VVTY+ +I++LC+    + 
Sbjct: 191 -GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK 249

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL    + G+ PD  +Y+ ++  YC  G+   AI FL  M SDG  PD+V Y+ ++ 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A +IF+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G  P    Y  LI G+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGL 451



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 154/284 (54%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           PD+ +Y +L+      G+ + G   +  +I +G   + + ++ L+  LC D +T DA+D 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E G  P+ +SY+ L+   C + R   A+E L  M  D   G  PD+V+Y T++ 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D G  P+V +YN++ +AL  +    +A+ +++ M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYNS++   C  G   EA+G L  M S    P V++Y++++   CK  R  E+ ++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G KP  TTY  L++G    G          ALV MH +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKG----------ALVEMHGL 358



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 21/376 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK D+++     M   G  P+ V    +I    +  +   A+   E + 
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P    YN+LI G C  N+ E A +++  +  RG   + + +N +I S C  G + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            + K+F+ ++R   KP VITY  LI    L G+ D+AMKLL  M                
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK   +  A    + +ES G  PD+I+YN++L+ L    +    ++L   +   G +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             + TY+I++  LC++  T+DA+ + +      L  +A +++ +I A  K GR D A + 
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
                S+G +P+   Y  +       G  ++  ++F  + D GC  +    N +   L  
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 382 SGDKIRA---LGMISE 394
            G+  RA   L MI E
Sbjct: 734 RGEITRAGTYLSMIDE 749



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + RD          R A+     +TPD  +Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            LI   C+ GRLDL                AI F                    L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
            GC+P++ +YN +L   C    + +ALE+   ++D    G PP+V SY T+ +  +  GD
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML +GI PD +TYNS+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +P+  TY LL++ +   G   EA ++ +++
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 18/243 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK DE++  +  MV+ G KP+ V  + LI  + +  +   A+ + + +E  G  PD+  
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN ++ G  +  +   A ++  R+   G   ++ TYNI++  LC   + + A ++F  L 
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-- 214
             + K    T+ I+I A +  G+ D+A  L                 +  + ++GQ    
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 215 ---QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
              Q   S+E  GC  D    N ++R LL  G+       ++ +  +       T S+ I
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763

Query: 272 SSL 274
             L
Sbjct: 764 DLL 766


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 228/465 (49%), Gaps = 18/465 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+     P ++   K++  F + +  + AV +   LE  G +PD+   N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI     VL ++  RG+ PD VT N +I  LC +G ++ A    D+LL    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +   ++Y  LI      G T  A+KLL ++                  +CK  +V +A+ 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +  +G   DV++Y+ L+      GK +E   L+ EM+ + + PNV TY+IL+ +LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++GK ++A  VL    +  + PD  +Y  L+  Y     +  A    + M   G  PD+ 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  ++  FCKN   D+AL +F+++      P + +Y+++   L  SG       +I EM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G   D ITY+SLI  LC++G +D A+ L   M+    RP + ++ I++ G CK  R+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++ EV   +  KG   N  TY ++I G    G   EA+ + + +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 215/437 (49%), Gaps = 18/437 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+       +  ++  G  PD V    LIK    + +  KA+   + L   G + +  +Y
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+G CK      A K+L ++  R   P+V  Y+ +I +LC   ++  A+ +F ++  
Sbjct: 168 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                 V+TY+ LI    +EG+  +A+ LL+EM                  +CK+G V +
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +     +PDVI+Y+ L+     + + ++ + +   M   G+ P+V TY+ILI+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C++   ++A+++ +   +K + P   +Y  LI   CK GR+    + +D M   G   
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPA 407

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D++ Y++++   CKNG+ D+A+ +F K+ D    PN+ ++  +   L   G    A  + 
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            ++L+KG   +  TYN +I+  C+ G+++EA+ +L  ME     P   ++  II+   K 
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527

Query: 453 RRINESIEVLAAMFEKG 469
              +++ ++L  M  +G
Sbjct: 528 DENDKAEKLLRQMIARG 544



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 190/386 (49%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    + G    ++  +  +     KP+V M + +I    + +  ++A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E+  K    DV  Y+ LI GFC   +++ A  +L+ +  +  +P+V TYNI++ +L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  V   +L+   KP VITY+ L+    L  +  KA  + + M         
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK  MV +A    + +  +   P +++Y+ L+  L   G+      L+ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG   +V+TYS LI  LC++G  + A+ +    K++ + P+ +++  L+   CK GR
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A E    +++ G   ++  YN ++   CK G  ++AL +  K+ D GC PN  ++ T
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  AL+   +  +A  ++ +M+++G+
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 151/299 (50%), Gaps = 18/299 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK  E++  +  MV     P+V     L+    +E K  +A  V+ ++ K   +PDV  Y
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + L+ G+    +++ A  V + +   G +PDV TY I+I   C   M++ A  +F ++ +
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P ++TY+ LI      G+      L+DEM                 G+CK G + +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 427

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      ++ +  +P++ ++ +LL  L   G+ ++ +++  +++++G   NV TY+++I+
Sbjct: 428 AIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             C+ G  E+A+ +L   ++ G  P+A++++ +I A  K    D A + L  MI+ G L
Sbjct: 488 GHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ ++ K      A+     +   G  PD++  N ++  FC  G       
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+   G PP+  + NT+   L   G   +AL    ++L++G + ++++Y +LI+ +C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    A+ LL  ++    +P V  Y+ II   CK + ++E+  + + M  KG   +  
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G    G   EA+ L N +V
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMV 261



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 1/196 (0%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A+   + M+     P I+ +N IL +F K  +   A+ +  +L   G  P++ + N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +     G       +++++L +G  PD +T N+LI  LC  G V +A+     + +  
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F+   +SY  +I G CK      +I++L  +  +  KPN   Y  +I+ +      +EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 495 ELANALVSMHAISRDT 510
            L + + ++  IS D 
Sbjct: 220 GLFSEM-TVKGISADV 234



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 68/148 (45%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N D A+  F ++  +   P +  +N +  +         A+ +   +  KGI+PD IT N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+C C  G +     +L  +    + P  ++ N +I G C   ++ +++     +  +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G + N+ +Y  LI G+   G    A++L
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKL 186



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)

Query: 367 PNVSSY--NTMFSALWSSGDKIR----ALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           PN SS+  N+  S   S    I+    A+   + ML     P  I +N ++    +    
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
             AV L   +E    +P +I+ NI+I  FC   +I     VLA + ++G  P+  T   L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I+G+   G   +A+   + L++
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLA 157


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 222/419 (52%), Gaps = 22/419 (5%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           ME+LE    P+++ YN +++G+CK   +E AN+ + ++   G  PD  TY  +I   C R
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++SAFKVF+++    C+   + YT LI    +  + D+AM L                
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL---------------- 310

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            FV+ ++   C P V +Y +L+++L    +  E   L+ EM   G++PN+ TY++LI SL
Sbjct: 311 -FVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C   K E A ++L    EKGL P+  +Y+ LI+ YCK G ++ A++ ++ M S    P+ 
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++  +CK+ N  +A+ +  K+ +    P+V +YN++      SG+   A  ++S 
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M  +G+ PD+ TY S+I  LC+   V+EA  L   +E     P V+ Y  +I G+CK  +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH---AISRDT 510
           ++E+  +L  M  K C PN  T+  LI G+   G   EA  L   +V +     +S DT
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 230/464 (49%), Gaps = 23/464 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI     A + DE++     M  + C P V   T LIK      + ++A+ +++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E+ G +P++  Y  LI   C   + E A ++L ++  +G  P+V+TYN +I   C RG
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           MIE A  V + +      P   TY  LI+                  G CK   V +A  
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIK------------------GYCKSN-VHKAMG 448

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R   PDV++YN L+      G ++   +L++ M  RGL P+  TY+ +I SLC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  + E+A D+  + ++KG+ P+   Y  LI  YCK G++D A   L+ M+S  CLP+ +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++   C +G   +A  + EK+  +G  P VS+   +   L   GD   A     +M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           LS G +PD  TY + I   CR+G + +A  ++  M      P + +Y+ +I G+    + 
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI---GYGGWRAEAMEL 496
           N + +VL  M + GC+P++ T++ LI+ +    YG  +    EL
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 38/498 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  ++++  +E M +    P+     +LIK + +    +KA+ V+ ++L
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PDV  YN+LI G C++   + A ++L  +  RG  PD  TY  MI SLC    +E
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD L +    P V+ YT LI      G+ D+A  +L++M                
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C  G + +A      +   G QP V +  +L+  LL  G ++       +M+S G +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY+  I + CR+G+  DA D++   +E G++PD ++Y  LI  Y   G+ + A + 
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694

Query: 322 LDYMISDGCLPDIVNYNTIL---------------AAFCKNGNA---DQALEIFEKLSDV 363
           L  M   GC P    + +++                  C   N    D  +E+ EK+ + 
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCLCRDGMVDE 422
              PN  SY  +   +   G+   A  +   M  ++GI P E+ +N+L+SC C+    +E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  ++ DM      P + S  ++I G  K         V   + + G   +E  + ++I+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874

Query: 483 GIGYGGWRAEAMELANAL 500
           G+G  G      EL N +
Sbjct: 875 GVGKQGLVEAFYELFNVM 892



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 20/407 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L++   +   ++   +V   +      P++ TYN M+   C  G +E A +   +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                P   TYT LI                  MG C++  +  AF+    +  +GC+ +
Sbjct: 246 EAGLDPDFFTYTSLI------------------MGYCQRKDLDSAFKVFNEMPLKGCRRN 287

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            ++Y  L+  L    + +E   L  +M      P V TY++LI SLC   +  +A+++++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +E G+ P+ ++Y  LI + C   + + A E L  M+  G +P+++ YN ++  +CK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             + A+++ E +      PN  +YN +    +   +  +A+G++++ML + + PD +TYN
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYN 466

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI   CR G  D A  LL  M      P   +Y  +I   CK++R+ E+ ++  ++ +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRL 514
           G  PN   Y  LI+G    G   EA  +   ++S + +    TF  L
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 233/469 (49%), Gaps = 21/469 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VM 95
           E  F  +++     G  D +L   E MV  GC    V    ++  F +E +   A+  + 
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283

Query: 96  EILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+  + G  PD + +N L++G CKA  ++ A +++D +   G+ PDV TYN +I  LC  
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G ++ A +  DQ++  +C P  +TY  LI     E Q ++A +L   +            
Sbjct: 344 GEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+C       A +    + S+GC+PD  +YNML+ +L + GK +E   ++ +M  
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G   +V+TY+ LI   C+  K  +A ++    +  G++ ++ +Y+ LI   CK  R++ 
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A + +D MI +G  PD   YN++L  FC+ G+  +A +I + ++  GC P++ +Y T+ S
Sbjct: 524 ASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFR 436
            L  +G    A  ++  +  KGI      YN +I  L R     EA+ L  +M E     
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAA 643

Query: 437 PTVISYNIIILGFCKTR-RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P  +SY I+  G C     I E+++ L  + EKG  P  ++  +L EG+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 241/474 (50%), Gaps = 20/474 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  LIK   RA +   ++  +E M + G  PD    T +++ + +E   + A+R+ E 
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQ 249

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRG 155
           + ++G      + N ++ GFCK  ++E A   +  + ++ GF PD  T+N ++  LC  G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            ++ A ++ D +L++   P V TY  +I                   G+CK G V +A +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVIS------------------GLCKLGEVKEAVE 351

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  + +R C P+ ++YN L+ TL    + EE  +L   + S+G+ P+V T++ LI  LC
Sbjct: 352 FLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
                  A+++    + KG  PD ++Y+ LI + C  G+LD A+  L  M   GC   ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++  FCK     +A EIF+++   G   N  +YNT+   L  S     A  ++ +M
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + +G +PD+ TYNSL++  CR G + +A  ++  M S    P +++Y  +I G CK  R+
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
             + ++L ++  KG       Y  +I+G+       EA+ L   ++  +  + D
Sbjct: 592 EVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPD 645



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 257/507 (50%), Gaps = 25/507 (4%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R+ + A  +PN     F  +   + +++ R  R+G FD+    +E M  +GC+      
Sbjct: 67  LRLFNLASKKPN-----FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPF 121

Query: 76  TKLIKKFFQERKSNKAVRVME-ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
             LI+ + Q    ++ + V+  +++ +G +PD   YN +++     N ++L      ++ 
Sbjct: 122 LILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMS 181

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             G  PDV T+N++I +LC    +  A  + + +      P   T+T ++Q  + EG  D
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLD 241

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR-GCQPDVISYNML 235
            A+++ ++M                 G CK+G V  A  F++ + ++ G  PD  ++N L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +  L   G  +   ++M  M+  G +P+V TY+ +IS LC+ G+ ++AV+ L     +  
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDC 361

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +P+  +Y+ LIS  CK+ +++ A E    + S G LPD+  +N+++   C   N   A+E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +FE++   GC P+  +YN +  +L S G    AL M+ +M   G     ITYN+LI   C
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +   + EA  +  +ME        ++YN +I G CK+RR+ ++ +++  M  +G KP++ 
Sbjct: 482 KANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKF 541

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
           TY  L+     GG   +A ++  A+ S
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTS 568


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 231/459 (50%), Gaps = 20/459 (4%)

Query: 39  QFMKLIKRSFRAGKF-DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           QF KL+    + G++ D  +   + M   G  P++   +  +  F Q ++ +    V+  
Sbjct: 94  QFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAK 153

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G +P +  +  LI+G CK  +   A ++ D + ++G  PDV TYN +I  LC  G 
Sbjct: 154 VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
             +A  +  ++    C+P ++TY+ LI +                  +C+  +V +A   
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDS------------------LCRDRLVNEALDI 255

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              ++++G  PD+ +Y  L++ L    +W+E   L+ EM S  + P++VT+++L+ + C+
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +GK  +A+ VL+   E G+ P+  +Y  L+  Y     +  A +    MI+ GC P+I +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +CK    D+A+++F ++   G  PN  SYNT+       G    A  +   M 
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G  PD  TY+ L+   C+ G + +A  L   M+ST  +P ++ Y I++   CK+    
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           ++ ++ + +F +G +P+   Y  +I G+   G   EA+E
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 215/412 (52%), Gaps = 23/412 (5%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQI-ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            +L +   P +  +  L+S   K  Q  ++   +  ++   G SP++ T +I +   C  
Sbjct: 82  HMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQL 141

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++  F V  ++++   +PT++T+T LI                   G+CK G   QA 
Sbjct: 142 QRVDLGFSVLAKVIKLGLQPTIVTFTTLIN------------------GLCKVGEFAQAV 183

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    + ++GCQPDV +YN ++  L  +G+      L+ +M   G +PN+VTYS LI SL
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CRD    +A+D+    K KG++PD ++Y  LI   CK  R   A   L+ M S   +PDI
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDI 303

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF--SALWSSGDKIRALGMI 392
           V +N ++  FCK G   +AL + + ++++G  PNV +Y+++    +LW+  D + A  + 
Sbjct: 304 VTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT--DVVEARKLF 361

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             M++KG +P+  +YN LI+  C+   +DEA+ L  +M      P  +SYN +I GFC+ 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            ++ E+ ++   M   G  P+  TY +L++G    G+  +A  L  A+ S +
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 226/436 (51%), Gaps = 18/436 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYN 110
           + D     +  ++  G +P +V  T LI    +  +  +AV + + ++ K  +PDV+ YN
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I+G CK  +   A  +L ++   G  P++VTY+ +I SLC   ++  A  +F  +   
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQA 213
              P + TYT LIQ      +  +A  LL+EM                   CK+G V +A
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              ++++   G +P+V++Y+ L+          E  KL   MI++G +PN+ +Y+ILI+ 
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+  + ++A+ +      +GLTP+  SY+ LI  +C+ G+L  A +    M ++G LPD
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y+ +L  FCK G   +A  +F  +      PN+  Y  +  A+  SG+   A  + S
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E+  +G++P    Y ++I+ LC++G++DEA+    +ME+    P  ISYN+II G  + +
Sbjct: 503 ELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHK 562

Query: 454 RINESIEVLAAMFEKG 469
             + ++ ++  M ++G
Sbjct: 563 DESRALLLVGEMRDRG 578



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 156/296 (52%), Gaps = 19/296 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK  E+L  +++M   G +P+VV  + L+  +       +A ++  ++ 
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P++F+YN LI+G+CKA +I+ A ++ + +  +G +P+ V+YN +I   C  G + 
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLR 425

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F  +  +   P + TY+IL+                   G CK+G +G+AF+  R
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLD------------------GFCKQGYLGKAFRLFR 467

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +++S   +P+++ Y +L+  +   G  ++  KL +E+  +GL+P+V  Y+ +I+ LC++G
Sbjct: 468 AMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEG 527

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
             ++A++  R  +  G  PD  SY+ +I    +      A+  +  M   G + D+
Sbjct: 528 LLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583


>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 207/400 (51%), Gaps = 26/400 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GK   +   I+ M      P    C  LI+   +   + +A RV++I+   G  PD+  Y
Sbjct: 144 GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 203

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G CK   ++ A ++LD +   G  PD +TYN ++  +   G  + A   +   LR
Sbjct: 204 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLR 263

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C   +ITYT+LI+       T +AM++L++M +                   GC PD+
Sbjct: 264 KGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAI------------------EGCYPDI 305

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+      GK+E+   ++  ++S G+ PN VTY+ L+ SLC  G  ++  ++L  
Sbjct: 306 VTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLI 365

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                  P   +Y+ LI+  CK G LD AI F D M+S  CLPDI+ YNT+LAA CK G 
Sbjct: 366 MNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGM 425

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+AL +   L+D  C P + +YN +   L   G   +A+G+  EM+ +G  PD+IT+ +
Sbjct: 426 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRT 485

Query: 410 LISCLCRDGMVDEAVGLLVDM-------ESTRFRPTVISY 442
           L   L R  +V++A+ +L +M       +++ FRP  + +
Sbjct: 486 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRPDPLKH 525



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 209/396 (52%), Gaps = 23/396 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N ++ +LCS+G + +A ++ D + R N  P   +   LI+  +    T++A ++L
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M                 G+CKKG++  A + +  +   GC PD I+YN +LR + + 
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G +++      + + +G    ++TY++LI  +C+   T  A++VL     +G  PD  +Y
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L++  CK G+ +     +  ++S G  P+ V YNT+L + C +G  D+  EI   ++ 
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNM 368

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
              PP V +YN + + L   G   RA+    +M+S    PD ITYN+L++ LC++GMVDE
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +  TR  P +I+YNI+I G  K   + +++ +   M E+G  P++ T+  L  
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRTLFW 488

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           G+    +R + +E  +ALV +  +++   +  N  F
Sbjct: 489 GL----FRLDLVE--DALVILKEMNKRNQRIKNSAF 518



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 28/303 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +++  F  G FD+++ F +  +  GC   ++  T LI+   +   + +A+ V+E + 
Sbjct: 238 YNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMA 297

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN+L++  CK  + E    ++  L S G  P+ VTYN ++ SLC+ G  +
Sbjct: 298 IEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWD 357

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              ++   +   +  PTV+TY ILI      G  D+A+   D+M                
Sbjct: 358 EVDEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 417

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+GMV +A   + SL    C P +I+YN+++  L   G  E+   L  EMI RG  
Sbjct: 418 AALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFA 477

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYDPL--------ISAYCK 311
           P+ +T+  L   L R    EDA+ +L+   ++   +   A+  DPL        I+AY  
Sbjct: 478 PDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRPDPLKHCKGCLFITAYVS 537

Query: 312 DGR 314
           D R
Sbjct: 538 DTR 540


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 219/430 (50%), Gaps = 19/430 (4%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
           + +  E MV    K  +V    +I    +E K  KA   +  +E YG +P+V  YN +I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+C   + E A+K+   ++ +   PD  TYN  I  LC    IE A  V  +LL     P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
             +TY  LI                   G C KG + +AF +   + +RG    V +YN+
Sbjct: 321 NAVTYNALID------------------GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  L    + EE E ++ EM  +G+EP+VVTY+I I+  CR G  + A+ +     EK 
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + P   +Y  LI  + K  R+  A E     I +G LPDI+ +N ++   C NGN D+A 
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++ +++ +    P+  ++NT+            A  ++ EM  +GI+PD I+YN+LIS  
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            + G + +A+ +  +M S  F PT+++YN +I G+ K    + + E+L  M  KG  P++
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602

Query: 475 TTYVLLIEGI 484
           +TY+ +IE +
Sbjct: 603 STYLYVIEAM 612



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 223/472 (47%), Gaps = 20/472 (4%)

Query: 33  FDVKETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            +VK T    L+  ++ +  K DE+L  +  M  N   P    C  L+    +  K   A
Sbjct: 142 LNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMA 201

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             V E + K   +  +  +N +I+  C+  + + A   +  +   G  P+VVTYN +I  
Sbjct: 202 WFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING 261

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C RG  E+A K+F  +   N KP   TY   I                    +CK+  +
Sbjct: 262 YCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISR------------------LCKERRI 303

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  L   G  P+ ++YN L+    N G  ++      EM++RG+  +V TY++L
Sbjct: 304 EEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLL 363

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I +L  + + E+A D+++  +EKG+ PD  +Y+  I+ YC+ G    A+   D M+    
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI 423

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +  Y +++  F K     +A E F+K    G  P++  +N +      +G+  RA  
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM +  + PDE+T+N+L+   CR+  V+EA  LL +M+    +P  ISYN +I G+ 
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K   + +++EV   M   G  P   TY  LI+G    G    A EL   + S
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQS 595



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 207/415 (49%), Gaps = 17/415 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              ++ L+S +C+  + + A + L+ ++     P   T N ++  L     I+ A+ V++
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++++ N K +++T+ I+I     EG+  KA   +  M                 G C +G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
               A +  ++++ +  +PD  +YN  +  L    + EE   ++ +++  GL PN VTY+
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C  G  + A         +G+    ++Y+ LI A   + R++ A + +  M   
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD+V YN  +  +C+ GNA +AL +F+++ +    P V +Y ++            A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                + + +G+ PD I +N+LI   C +G +D A  LL +M++ +  P  +++N ++ G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +C+ R++ E+ ++L  M E+G KP+  +Y  LI G    G   +A+E+ + ++S+
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL 561



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 186/390 (47%), Gaps = 55/390 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVF 107
           R GK+ ++  FI  M   G KP+VV    +I  +    K   A ++ + + +K  +PD +
Sbjct: 229 REGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCY 288

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+ IS  CK  +IE A+ VL +L   G  P+ VTYN +I   C++G ++ AF   D++
Sbjct: 289 TYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +      +V TY +LI A  LE + ++A  ++ EM                 G C+ G  
Sbjct: 349 MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNA 408

Query: 211 GQAF------------------------------------QFVRSLESRGCQPDVISYNM 234
            +A                                     +F +S++  G  PD+I +N 
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK-EGMLPDIIMFNA 467

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+      G  +   +L+ EM +  + P+ VT++ L+   CR+ K E+A  +L   KE+G
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  SY+ LIS Y K G +  A+E  D M+S G  P ++ YN ++  + K G AD A 
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           E+  ++   G  P+ S+Y  +  A+ ++ D
Sbjct: 588 ELLREMQSKGITPDDSTYLYVIEAMKTNDD 617


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 213/409 (52%), Gaps = 19/409 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    +E K  KA   +  +E  G +P+V  YN +I G+C   ++E A  VLD +++RG
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PD  TY  +I  +C  G +E A  + +++      PT +TY  LI             
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID------------ 349

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C KG + +AF +   +  R   P V +YN+L+  L   GK +E + ++ +M 
Sbjct: 350 ------GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G+ P+ +TY+ILI+  CR G  + A ++      KG+ P   +Y  LI    K  R+ 
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A +  + +I +G  PD++ +N ++   C NGN D+A  + +++      P+  +YNT+ 
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLM 523

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                 G    A  ++ EM  +GI PD I+YN+LIS   + G +++A  +  +M S  F 
Sbjct: 524 QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFN 583

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           PT+++YN +I G CK ++ + + E+L  M  KG  P+++TY  LIEGIG
Sbjct: 584 PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIG 632



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 53/440 (12%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++ G      ++ LI   C+  + + A +  D ++ +G  P + T+N M+         E
Sbjct: 159 DRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTE 218

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           + + ++ ++ R   K TV T+ I+I                    +CK+G + +A  F+ 
Sbjct: 219 TVWVLYAEMFRLKIKSTVYTFNIMINV------------------LCKEGKLKKAKDFIG 260

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S+E+ G +P+V++YN ++    + G+ E    ++  M +RG+EP+  TY  LIS +C+ G
Sbjct: 261 SMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E+A  +L   KE GL P A +Y+ LI  YC  G L  A  + D M+    LP +  YN
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++ A    G  D+A  + + + D G  P+  +YN + +     G+  +A  +  EM+SK
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440

Query: 399 GIEPDEITYNSLISCL-----------------------------------CRDGMVDEA 423
           GI+P  +TY SLI  L                                   C +G +D A
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             LL +M+     P  ++YN ++ G C+  ++ E+ E+L  M  +G +P+  +Y  LI G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560

Query: 484 IGYGGWRAEAMELANALVSM 503
               G   +A  + + ++S+
Sbjct: 561 YSKRGDINDAFTIRDEMLSI 580



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 21/259 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   F  GK DE+   I+ M  +G  PD +    LI  + +   + KA  +  E++ K 
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P +  Y +LI    K N+++ A+ + +++   G SPD++ +N +I   C+ G ++ AF
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  ++ + N  P  +TY  L+Q    EG+ ++A +LL EM                 G 
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K+G +  AF     + S G  P +++YN L++ L    + +  E+L+ EM+S+G+ P+ 
Sbjct: 562 SKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDD 621

Query: 265 VTYSILISSLCRDGKTEDA 283
            TY  LI  +   GK +D+
Sbjct: 622 STYFSLIEGI---GKVDDS 637



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L   ++SR   P    + +  +   R    +D    L   +++  T  +  +D LI A C
Sbjct: 118 LAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACC 177

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +  R D A E  D M   G +P I  +N +L+ F K    +    ++ ++  +     V 
Sbjct: 178 ELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVY 237

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N M + L   G   +A   I  M + G++P+ +TYN++I   C  G V+ A  +L  M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++    P   +Y  +I G CK  ++ E+  +L  M E G  P   TY  LI+G
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDG 350


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 238/478 (49%), Gaps = 27/478 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK +++   ++ M+  GCKP+      LI+ + +E    +A+ +++ +EK  
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P   +Y A+I+G C    + LANK+L+++   G  P+VV Y+ +I    S G IE A 
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 404

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGM 204
           ++ D +      P +  Y  +I      G+ ++A   L E                 +G 
Sbjct: 405 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 464

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G + +A ++   +   G  P+   Y +L+      G   E   +   + + G+ P+V
Sbjct: 465 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 524

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T S  I  L ++G+ ++A+ V    KEKGL PD ++Y  LIS +CK G ++ A E  D 
Sbjct: 525 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+I  YN ++   CK+G+  +A ++F+ + + G  P+  +Y+TM      S +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 644

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM SKG++P    YN+L+   C++G +++A+ L  +M    F  T +S+N 
Sbjct: 645 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNT 703

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA--MELANAL 500
           +I G+CK+ +I E+ ++   M  K   P+  TY  +I+      W  +A  ME AN L
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID------WHCKAGKMEEANLL 755



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 230/461 (49%), Gaps = 18/461 (3%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK 118
           + SM   G  P+    T +     + ++ N+A    E ++K G +PD  A +ALI GF +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
              I+   ++ D + S G   +++TYN++I  LC  G +E A ++   ++   CKP   T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLE 221
           + +LI+    E    +A++LLDEM                 G+C    +  A + +  + 
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +P+V+ Y+ L+    + G+ EE  +L+  M   G+ P++  Y+ +IS L + GK E
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A   L   + +GL PDA ++   I  Y K G++  A ++ D M+  G +P+   Y  ++
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               K GN  +AL IF  L  +G  P+V + +     L  +G    AL + SE+  KG+ 
Sbjct: 497 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 556

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  TY+SLIS  C+ G V++A  L  +M      P +  YN ++ G CK+  I  + ++
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              M EKG +P+  TY  +I+G       AEA  L + + S
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 216/445 (48%), Gaps = 20/445 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +E M  +G KP+VV+ + LI  +  E +  +A R+++ +   G  PD+F YNA+IS   
Sbjct: 371 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           KA ++E A+  L  ++ RG  PD VT+   I      G +  A K FD++L     P   
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            YT+LI                   G  K G + +A    R L + G  PDV + +  + 
Sbjct: 491 LYTVLIN------------------GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            LL  G+ +E  K+ +E+  +GL P+V TYS LIS  C+ G+ E A ++      KG+ P
Sbjct: 533 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           + + Y+ L+   CK G +  A +  D M   G  PD V Y+T++  +CK+ N  +A  +F
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++   G  P+   YN +       GD  +A+ +  EML KG     +++N+LI   C+ 
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 711

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             + EA  L  +M + +  P  ++Y  +I   CK  ++ E+  +   M E+    +  TY
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771

Query: 478 VLLIEGIGYGGWRAEAMELANALVS 502
             L+ G    G  +E   L   +V+
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVA 796



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 222/466 (47%), Gaps = 18/466 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           RA + +E+    E M   G KPD   C+ LI  F +E   ++ +R+ +++   G P ++ 
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 280

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G CK  ++E A ++L  + + G  P+  T+ ++I   C    +  A ++ D++
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            + N  P+ ++Y  +I           A KLL++M                 G   +G +
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G  PD+  YN ++  L   GK EE    + E+  RGL+P+ VT+   
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I    + GK  +A        + GL P+   Y  LI+ + K G L  A+    ++ + G 
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LPD+   +  +    KNG   +AL++F +L + G  P+V +Y+++ S     G+  +A  
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EM  KGI P+   YN+L+  LC+ G +  A  L   M      P  ++Y+ +I G+C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K+  + E+  +   M  KG +P+   Y  L+ G    G   +AM L
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 212/442 (47%), Gaps = 20/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   F+AG   E+L     + A G  PDV  C+  I    +  +  +A++V  E+ EK 
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF Y++LISGFCK  ++E A ++ D +  +G +P++  YN ++  LC  G I+ A 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           K+FD +     +P  +TY+ +I                   G CK   V +AF     + 
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMID------------------GYCKSENVAEAFSLFHEMP 656

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S+G QP    YN L+      G  E+   L  EM+ +G     ++++ LI   C+  K +
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQ 715

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  + +    K + PD  +Y  +I  +CK G+++ A      M     + D V Y +++
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             + K G + +   +FEK+   G  P+  +Y  +  A     + + A  +  E++ KG+ 
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
                ++ LI+ LC+   + EA  LL +M     +P++ + + ++  F +  +++E+  V
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895

Query: 462 LAAMFEKGCKPNETTYVLLIEG 483
              +   G  P+ TT + L+ G
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNG 917



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 19/480 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +AGK +E+  ++  +   G KPD V     I  + +  K  +A +   E+L+    P+  
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI+G  KA  +  A  +   L + G  PDV T +  I  L   G ++ A KVF +L
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P V TY+ LI     +G+ +KA +L DEM                 G+CK G +
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G +PD ++Y+ ++          E   L  EM S+G++P+   Y+ L
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C++G  E A+++ R   +KG      S++ LI  YCK  ++  A +    MI+   
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD V Y T++   CK G  ++A  +F+++ +     +  +Y ++       G       
Sbjct: 730 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 789

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  +M++KG++PDE+TY  +I   C++  + EA  L  ++           ++++I   C
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 849

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   + E+ ++L  M E G KP+      L+      G   EA  +   + S+  +   T
Sbjct: 850 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 909



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 186/402 (46%), Gaps = 17/402 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
            I    + G+  E+L     +   G  PDV   + LI  F ++ +  KA  +  E+  K 
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++F YNAL+ G CK+  I+ A K+ D +  +G  PD VTY+ MI   C    +  AF
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
            +F ++     +P    Y  L+     EG  +KAM L  EM                G C
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYC 709

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K   + +A Q  + + ++   PD ++Y  ++      GK EE   L  EM  R L  + V
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ L+    + G++ +   +      KG+ PD  +Y  +I A+CK+  L  A +  D +
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G L     ++ ++ A CK  +  +A ++ +++ ++G  P++++ +T+  +   +G  
Sbjct: 830 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 889

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
             A  +   + S G+ PD  T   L++    D   ++A  L+
Sbjct: 890 DEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 931


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 247/504 (49%), Gaps = 27/504 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  S+ +  NT+ L+          ++    +A +FD+    I  M      PDVV   
Sbjct: 84  RLVFSSNSEVNTYTLNI---------MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHN 134

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            ++   F+   +  A+ +++ +   G +P +  YN+++ G C++   + A +V   +   
Sbjct: 135 VMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF 194

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G +PDV ++ I+IG  C  G IE A K++ ++     KP +++++ LI      G+ D A
Sbjct: 195 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 254

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           M  L EM                 G C+ G++  A +    +   GC PDV++YN LL  
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +  + E L+ EM  RG+ P++ T++ LI   C +GK + A+ +      + L PD
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ LI   C+ G LD A +  D M S    P+ V Y+ ++ + C+ G  + A    +
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + G  PN+ +YN++      SG+  +    + +M+   + PD ITYN+LI    ++ 
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + +A  LL  ME  + +P V++YN++I GF     + E+  +   M  KG +P+  TY+
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
            +I G    G   EA +L + ++ 
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQ 578



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 223/445 (50%), Gaps = 18/445 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++   FRAG  + ++  ++SMV+ G KP +V    ++K   +    +KA  V + ++ +G
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV ++  LI GFC+  +IE A K+   +R RG  PD+V+++ +IG    RG ++ A 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               ++      P  + YT++I      G    A+++ DEM                 G+
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+  +  A   +  +  RG  PD+ ++  L+      GK ++  +L   M+++ L P++
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI  +CR G  + A D+      + + P+  +Y  LI ++C+ G+++ A  FLD 
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI+ G LP+I+ YN+I+  +C++GN  +  +  +K+      P++ +YNT+         
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +++ M  + ++PD +TYN LI+     G V EA  +   M +    P   +Y  
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 445 IILGFCKTRRINESIEVLAAMFEKG 469
           +I G        E+ ++   M ++G
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 191/380 (50%), Gaps = 18/380 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G+ +E+L   + M   G KPD+V  + LI  F +  K + A+  +  + 
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G  PD   Y  +I GFC+A  +  A +V D +   G  PDVVTYN ++  LC    + 
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + +++      P + T+T LI    +EG+ DKA++L D M                
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            GMC++G + +A      + SR   P+ ++Y++L+ +    G+ E+    + EMI++G+ 
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN++TY+ +I   CR G        L+      ++PD  +Y+ LI  Y K+ ++  A + 
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M  +   PD+V YN ++  F  +GN  +A  IFEK+   G  P+  +Y +M +   +
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562

Query: 382 SGDKIRALGMISEMLSKGIE 401
           +G+   A  +  EML +G E
Sbjct: 563 AGNSKEAFQLHDEMLQRGKE 582



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 183/370 (49%), Gaps = 18/370 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R GK D ++ ++  M   G  PD V+ T +I  F +    + A+RV + + 
Sbjct: 238 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 297

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV  YN L++G CK  ++  A  +L+ +R RG  PD+ T+  +I   C  G ++
Sbjct: 298 GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD 357

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++FD +L    +P ++TY  LI     +G  DKA  L D+M                
Sbjct: 358 KALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 417

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C+KG V  AF F+  + ++G  P++++YN +++     G   +G+K + +M+   + 
Sbjct: 418 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 477

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+++TY+ LI    ++ K  DA  +L   +++ + PD  +Y+ LI+ +   G +  A   
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 537

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + M + G  PD   Y +++      GN+ +A ++ +++   G     ++    F  + +
Sbjct: 538 FEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQN 597

Query: 382 SGDKIRALGM 391
           S + ++ + M
Sbjct: 598 SAESLKQMPM 607



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 42/317 (13%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C++       + V SL      P    +++L+RT     K  E  +    ++   +  
Sbjct: 6   GACRR-------EIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 58

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
                + L+++L R G    A D  R         + Y+ + ++  YCK    D     +
Sbjct: 59  PAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVI 118

Query: 323 DYMISDGCLPDIVN-----------------------------------YNTILAAFCKN 347
             M      PD+V                                    YN++L   C++
Sbjct: 119 SEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRS 178

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A E+F+++ D G  P+V S+  +       G+   AL +  EM  +GI+PD +++
Sbjct: 179 GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 238

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           + LI    R G +D A+  L +M      P  + Y ++I GFC+   +++++ V   M  
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298

Query: 468 KGCKPNETTYVLLIEGI 484
            GC P+  TY  L+ G+
Sbjct: 299 CGCLPDVVTYNTLLNGL 315


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 238/478 (49%), Gaps = 27/478 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK +++   ++ M+  GCKP+      LI+ + +E    +A+ +++ +EK  
Sbjct: 86  LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P   +Y A+I+G C    + LANK+L+++   G  P+VV Y+ +I    S G IE A 
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 205

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGM 204
           ++ D +      P +  Y  +I      G+ ++A   L E                 +G 
Sbjct: 206 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 265

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G + +A ++   +   G  P+   Y +L+      G   E   +   + + G+ P+V
Sbjct: 266 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDV 325

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T S  I  L ++G+ ++A+ V    KEKGL PD ++Y  LIS +CK G ++ A E  D 
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+I  YN ++   CK+G+  +A ++F+ + + G  P+  +Y+TM      S +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 445

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM SKG++P    YN+L+   C++G +++A+ L  +M    F  T +S+N 
Sbjct: 446 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNT 504

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA--MELANAL 500
           +I G+CK+ +I E+ ++   M  K   P+  TY  +I+      W  +A  ME AN L
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID------WHCKAGKMEEANLL 556



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 228/458 (49%), Gaps = 18/458 (3%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M   G  P+    T +     + ++ N+A    E ++K G +PD  A +ALI GF +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           I+   ++ D + S G   +++TYN++I  LC  G +E A ++   ++   CKP   T+ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI+    E    +A++LLDEM                 G+C    +  A + +  +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +P+V+ Y+ L+    + G+ EE  +L+  M   G+ P++  Y+ +IS L + GK E+A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
             L   + +GL PDA ++   I  Y K G++  A ++ D M+  G +P+   Y  ++   
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K GN  +AL IF  L  +G  P+V + +     L  +G    AL + SE+  KG+ PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TY+SLIS  C+ G V++A  L  +M      P +  YN ++ G CK+  I  + ++   
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           M EKG +P+  TY  +I+G       AEA  L + + S
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 458



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 222/466 (47%), Gaps = 18/466 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           RA + +E+    E M   G KPD   C+ LI  F +E   ++ +R+ +++   G P ++ 
Sbjct: 22  RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 81

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G CK  ++E A ++L  + + G  P+  T+ ++I   C    +  A ++ D++
Sbjct: 82  TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            + N  P+ ++Y  +I           A KLL++M                 G   +G +
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G  PD+  YN ++  L   GK EE    + E+  RGL+P+ VT+   
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I    + GK  +A        + GL P+   Y  LI+ + K G L  A+    ++ + G 
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LPD+   +  +    KNG   +AL++F +L + G  P+V +Y+++ S     G+  +A  
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EM  KGI P+   YN+L+  LC+ G +  A  L   M      P  ++Y+ +I G+C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K+  + E+  +   M  KG +P+   Y  L+ G    G   +AM L
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 214/461 (46%), Gaps = 36/461 (7%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +E M  +G KP+VV+ + LI  +  E +  +A R+++ +   G  PD+F YNA+IS   
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           KA ++E A+  L  ++ RG  PD VT+   I      G +  A K FD++L     P   
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
            YT+LI      G   +A+ +   +                 G+ K G V +A +    L
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           + +G  PDV +Y+ L+      G+ E+  +L  EM  +G+ PN+  Y+ L+  LC+ G  
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  +     EKGL PD+ +Y  +I  YCK   +  A      M S G  P    YN +
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CK G+ ++A+ +F ++   G    +S +NT+      S     A  +  EM++K I
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF-----------------RPTVISYN 443
            PD +TY ++I   C+ G ++EA  L  +M+                     +P  ++Y 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++I   CK   + E+ ++   +  KG     T + LLI  +
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 216/470 (45%), Gaps = 36/470 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +AGK +E+  ++  +   G KPD V     I  + +  K  +A +   E+L+    P+  
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI+G  KA  +  A  +   L + G  PDV T +  I  L   G ++ A KVF +L
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P V TY+ LI     +G+ +KA +L DEM                 G+CK G +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G +PD ++Y+ ++          E   L  EM S+G++P+   Y+ L
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C++G  E A+++ R   +KG      S++ LI  YCK  ++  A +    MI+   
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 331 LPDIVNYNTILAAFCKNGNADQA-----------------LEIFEKLSDVGCPPNVSSYN 373
           +PD V Y T++   CK G  ++A                   +FEK+   G  P+  +Y 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +  A     + + A  +  E++ KG+      ++ LI+ LC+   + EA  LL +M   
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 650

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +P++ + + ++  F +  +++E+  V   +   G  P+ TT + L+ G
Sbjct: 651 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 36/405 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   F+AG   E+L     + A G  PDV  C+  I    +  +  +A++V  E+ EK 
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF Y++LISGFCK  ++E A ++ D +  +G +P++  YN ++  LC  G I+ A 
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+FD +     +P  +TY+ +I          +A  L  EM                 G 
Sbjct: 416 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G + +A    R +  +G     +S+N L+       K +E  +L  EMI++ + P+ 
Sbjct: 476 CKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 534

Query: 265 VTYSILISSLCRDGKTEDA-------------VDVLRAAKEK----GLTPDAYSYDPLIS 307
           VTY+ +I   C+ GK E+A             VD + A  EK    G+ PD  +Y  +I 
Sbjct: 535 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIY 594

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+CK+  L  A +  D ++  G L     ++ ++ A CK  +  +A ++ +++ ++G  P
Sbjct: 595 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 654

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           ++++ +T+  +   +G    A  +   + S G+ PD  T   L++
Sbjct: 655 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 99/276 (35%), Gaps = 76/276 (27%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    ++ K  E+    + M+A    PD V                          
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-------------------------- 535

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    Y  +I   CKA ++E AN +   ++ R    D V                 
Sbjct: 536 --------TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV----------------- 570

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAFQF 216
            F +F++++    KP  +TY ++I A   E    +A KL DE+   GM  KG +      
Sbjct: 571 -FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI------ 623

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                          +++L+  L       E  KL+ EM   GL+P++   S L+ S   
Sbjct: 624 ---------------HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 668

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            GK ++A  V    K  GL PD  +   L++    D
Sbjct: 669 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLND 704


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 235/449 (52%), Gaps = 25/449 (5%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A++RP   ++       +F KL+    +  KFD  + F E M   G   ++     LI  
Sbjct: 70  AQSRPFPSII-------EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122

Query: 82  FFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           F +  + + A+ ++  + K G EPD+   N+L++GFC  N+I  A  ++D++   G+ PD
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
            VT+  +I  L        A  + D++++  C+P ++TY  ++      G TD A+ LL+
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           +M                  +CK      A      +E++G +P+VI+Y+ L+  L N G
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           +W +  +L+++MI R + PN+VT+S LI +  + GK   A  +     ++ + P+ ++Y 
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI+ +C   RL  A + L+ MI   CLP++V YNT++  FCK    D+ +E+F ++S  
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G   N  +Y T+    + + D   A  +  +M+S G+ P+ +TYN L+  LC++G + +A
Sbjct: 423 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + +   ++ +   P + +YNI+I G CK 
Sbjct: 483 MVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 181/380 (47%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ L+S   K N+ +L     +++   G S ++ TYNI+I   C    +  A  +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P ++T   L+                   G C    +  A   V  +   
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLN------------------GFCHGNRISDAVALVDQMVEM 177

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD +++  L+  L    K  E   L+  M+ RG +P++VTY  +++ LC+ G T+ A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L   +   +  +   Y  +I + CK    D A+     M + G  P+++ Y+++++ 
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G    A  +   + +    PN+ +++ +  A    G  ++A  +  EM+ + I+P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY+SLI+  C    + EA  +L  M      P V++YN +I GFCK +R+++ +E+  
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M ++G   N  TY  LI G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHG 437



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 146/273 (53%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD+++ N LL    +  +  +   L+ +M+  G +P+ VT++ LI  L    K  +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V ++    ++G  PD  +Y  +++  CK G  DLA+  L+ M +     ++V Y+T++ +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK  + D AL +F ++ + G  PNV +Y+++ S L + G    A  ++S+M+ + I P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+++LI    + G + +A  L  +M      P + +Y+ +I GFC   R+ E+ ++L 
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M  K C PN  TY  LI G        + MEL
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 137/259 (52%), Gaps = 1/259 (0%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  +LRT L+  + ++   L   M      P+++ +S L+S++ +  K +  +      +
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G++ + Y+Y+ LI+ +C+  RL LA+  L  M+  G  PDIV  N++L  FC      
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A+ + +++ ++G  P+  ++ T+   L+       A+ +I  M+ +G +PD +TY +++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC+ G  D A+ LL  ME+ +    V+ Y+ +I   CK R  ++++ +   M  KG +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 472 PNETTYVLLIEGI-GYGGW 489
           PN  TY  LI  +  YG W
Sbjct: 286 PNVITYSSLISCLCNYGRW 304



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 107/216 (49%), Gaps = 18/216 (8%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           G++ ++   +  M+     P++V  + LI  F ++ K  KA ++ E ++++  +P++F Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           ++LI+GFC  +++  A ++L+ +  +   P+VVTYN +I   C    ++   ++F ++ +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                  +TYT LI         D A  +  +M                 G+CK G + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
           A      L+    +PD+ +YN+++  +   GKW+ G
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 97/202 (48%)

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           +Y Y  ++     D  LD AI     M      P I+ ++ +L+A  K    D  +   E
Sbjct: 43  SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+  +G   N+ +YN + +          AL ++ +M+  G EPD +T NSL++  C   
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + +AV L+  M    ++P  +++  +I G     + +E++ ++  M ++GC+P+  TY 
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222

Query: 479 LLIEGIGYGGWRAEAMELANAL 500
            ++ G+   G    A+ L N +
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKM 244


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 235/476 (49%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ MV +G +P+ +    ++    +   +  A+ ++  +E
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239

Query: 100 KYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +    +P+V  Y+A+I G  K  +   A  +   ++ +G SP++ TYN MI   CS G  
Sbjct: 240 EVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRW 299

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++      P V+T+++LI A + EG+  +A +L +EM               
Sbjct: 300 SEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM--------------- 344

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+YN ++       + +  E++   M ++G  P+V+T+SILI   C  
Sbjct: 345 ---LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGA 401

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D + +L     +GL  +  +Y  LI  +C+ G L+ A++ L  MIS G  P++V  
Sbjct: 402 KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTC 461

Query: 338 NTILAAFCKNGNADQALEIFEKLS------DVGCP-----PNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +       D   P     P+V +YN +   L + G   
Sbjct: 462 NTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +G+ PD ITYNS+I  LC+   +DEA  +   M S  F P V+++  +I
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+ + +EV   M  +G   N  TY  LI G    G    A+++   ++S
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 229/475 (48%), Gaps = 33/475 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK      K   +L     +   G  P +V  + L+     E + ++A   +    
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA---LHFFH 170

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +  +P+V A+  L++G C+  ++  A  +LDR+   G  P+ +TY  ++  +C  G   S
Sbjct: 171 QICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 230

Query: 160 AFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A  +  ++      KP V+ Y+ +I     +G+   A  L  EM                
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM---------------- 274

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             + +G  P++ +YN ++    + G+W E ++L+ EM  R + P+VVT+S+LI++L ++G
Sbjct: 275 --QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG 332

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  +A ++      +G+ P+  +Y+ +I  + K  RLD A      M + GC PD++ ++
Sbjct: 333 KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFS 392

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +C     D  +++  ++S  G   N  +Y T+       G+   AL ++ EM+S 
Sbjct: 393 ILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISS 452

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF-----------RPTVISYNIIIL 447
           G+ P+ +T N+L+  LC +G + +A+ +   M+ ++             P V +YNI+I 
Sbjct: 453 GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILIC 512

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G     + +E+ E+   M  +G  P+  TY  +I+G+       EA ++ +++ S
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGS 567



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 29/369 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ E+   +  M      PDVV  + LI    +E K  +A  +  E+L +   P+   
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN++I GF K N+++ A ++   + ++G SPDV+T++I+I   C    ++   K+  ++ 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R       ITYT LI      G  + A+ LL EM                 G+C  G + 
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++               +PDV +YN+L+  L+N GK+ E E+L  EM  RGL
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TY+ +I  LC+  + ++A  +  +   KG +PD  ++  LI+ YCK GR+   +E
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE 595

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  FC+ GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 596 VFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 655

Query: 381 SSGDKIRAL 389
           S  +  RA+
Sbjct: 656 SKEELKRAV 664



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 202/423 (47%), Gaps = 29/423 (6%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANK 127
           KP+VV+ + +I   +++ +   A  +  E+ EK   P++F YN +I+GFC + +   A +
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           +L  +  R  SPDVVT++++I +L   G    A ++++++L     P  ITY  +I    
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
            + + D A ++   M                 G C    V    + +  +  RG   + I
Sbjct: 365 KQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  L+     +G       L+ EMIS G+ PNVVT + L+  LC +GK +DA+++ +  
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484

Query: 291 KEKGL-----------TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           ++  +            PD  +Y+ LI     +G+   A E  + M   G +PD + YN+
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK    D+A ++F+ +   G  P+V ++ T+ +     G     L +  EM  +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I  + ITY +LI   C+ G ++ A+ +  +M S+   P  I+   ++ G      +  ++
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664

Query: 460 EVL 462
           + L
Sbjct: 665 QCL 667



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 29/404 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +I   ++ G+  ++      M   G  P++     +I  F    + ++A R++ E+ 
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PDV  ++ LI+   K  +   A ++ + +  RG  P+ +TYN MI     +  ++
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A ++F  +    C P VIT++ILI       + D  MKLL EM                
Sbjct: 371 AAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL- 260
            G C+ G +  A   ++ + S G  P+V++ N LL  L N GK ++  ++   M    + 
Sbjct: 431 HGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMD 490

Query: 261 ----------EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                     EP+V TY+ILI  L  +GK  +A ++      +GL PD  +Y+ +I   C
Sbjct: 491 LDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLC 550

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K  RLD A +  D M S G  PD+V + T++  +CK G     LE+F ++   G   N  
Sbjct: 551 KQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI 610

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           +Y T+       G+   AL +  EM+S G+ PD IT  ++++ L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 7/194 (3%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD AI+   YM+    LP ++++  +L    +    D  + +  K+     P N+ S+  
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +     S      AL    ++   G  P  +T+++L+  LC +  V EA+     +    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +P VI++  ++ G C+  R+ E++ +L  M E G +PN+ TY  +++G+   G    A+
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 495 ELANALVSMHAISR 508
              N L  M  +SR
Sbjct: 233 ---NLLRKMEEVSR 243


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 216/431 (50%), Gaps = 19/431 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    +   +   L     M + G  PDV     LI  F   R+   A  V+  L 
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +N LI G C   +I  A  + D+    GF PDVVTY  ++  LC  G   
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++   +++ NC+P VI Y  +I +                  +CK   V +AF    
Sbjct: 235 AAIRLLRSMVQKNCRPNVIAYNTIIDS------------------LCKDRQVTEAFNLFS 276

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + ++G  PD+ +YN L+  L N+ +W+    L+ EM++  + PNVV +S ++ +LC++G
Sbjct: 277 EMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 336

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A DV+    ++G+ PD  +Y  L+  +C    +D A++  D M+  GC+P++ +YN
Sbjct: 337 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 396

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +C+    D+A+ + E++S  G   +  +YNT+   L   G    A+ +  EM++ 
Sbjct: 397 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 456

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TY  L+  LC++  + EA+ LL  +E +     ++ YNI I G C+   +  +
Sbjct: 457 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516

Query: 459 IEVLAAMFEKG 469
            ++ + +  +G
Sbjct: 517 RDLFSNLSCQG 527



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 225/451 (49%), Gaps = 23/451 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            D++L     M+     P  V  TKL+    + +  +  + +   ++ +G  PDV+  N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI+ FC   ++  A  VL +L   G  PD  T+N +I  LC  G I  A  +FD+ + + 
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+TY  L+                   G+CK G    A + +RS+  + C+P+VI+
Sbjct: 213 FQPDVVTYGTLMN------------------GLCKVGNTSAAIRLLRSMVQKNCRPNVIA 254

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN ++ +L    +  E   L +EMI++G+ P++ TY+ LI +LC   + +    +L    
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
              + P+   +  ++ A CK+G + +A + +D MI  G  PD+V Y  ++   C     D
Sbjct: 315 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 374

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+++F+ +   GC PNV SYN + +         +A+G++ +M  +G+  D +TYN+LI
Sbjct: 375 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 434

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC  G +  A+ L  +M ++   P +++Y I++   CK   + E++ +L A+      
Sbjct: 435 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 494

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +   Y + I+G+     RA  +E A  L S
Sbjct: 495 ADILVYNIAIDGM----CRAGELEAARDLFS 521



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 22/392 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL---LDEMGM--------- 204
           ++ A   F+++L  +  P+ + +T L+ +          + L   +D  G+         
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C    +G AF  +  L   GCQPD  ++N L+R L   GK  E   L  + I  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +P+VVTY  L++ LC+ G T  A+ +LR+  +K   P+  +Y+ +I + CKD ++  A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
                MI+ G  PDI  YN+++ A C          +  ++ +    PNV  ++T+  AL
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  ++  M+ +G+EPD +TY +L+   C    +DEAV +   M      P V
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI+I G+C+ +R+++++ +L  M  +G   +  TY  LI G+ + G    A+ L + 
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 500 LVSMHAISRDTFKRLNRTFPLLDVYKEISHLA 531
           +V+   I      R+     LLD   +  HLA
Sbjct: 453 MVASGQIPDLVTYRI-----LLDYLCKNHHLA 479



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 19/364 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
            T F  LI+     GK  E+L+  +  +  G +PDVV    L+    +   ++ A+R++ 
Sbjct: 182 NTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLR 241

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++K   P+V AYN +I   CK  Q+  A  +   + ++G SPD+ TYN +I +LC+  
Sbjct: 242 SMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLC 301

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             +    + ++++     P V+ ++ ++ A                  +CK+GM+  A  
Sbjct: 302 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDA------------------LCKEGMIAIAHD 343

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V  +  RG +PDV++Y  L+       + +E  K+   M+ +G  PNV +Y+ILI+  C
Sbjct: 344 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 403

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  + + A+ +L     +GL  D  +Y+ LI   C  GRL  AI     M++ G +PD+V
Sbjct: 404 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 463

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  +L   CKN +  +A+ + + +       ++  YN     +  +G+   A  + S +
Sbjct: 464 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523

Query: 396 LSKG 399
             +G
Sbjct: 524 SCQG 527



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI      G+   ++     MVA+G  PD+V    L+    +     +A+ +++ +E
Sbjct: 430 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 489

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
               + D+  YN  I G C+A ++E A  +   L  +GF+
Sbjct: 490 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 230/470 (48%), Gaps = 19/470 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   FRAG  D ++  ++SM   G KP +V    ++K   + R+ +KA  V   +++  
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDV ++N LI GFC+  +++ A K    ++ R  +PDVV+++ +IG    RG ++ A 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAG 317

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
               ++      P  + YT++I                   G C+ G + +A +    + 
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIG------------------GFCRAGSMSEALRVRDEMV 359

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             GC PDV++YN LL  L    +  + EKL+ EM  RG+ P++ T++ LI   CR G  E
Sbjct: 360 GFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+ +      + L PD  +Y+ LI   C+ G L  A E  D M +   LP+ + Y+ ++
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            + C+ G  + A    +++   G  PN+ +YN++      SG+  +    + +M    + 
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD IT+N+LI    ++  +  A  +   ME    RP  ++YN+II GF +   + ++  V
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              M + G +P+  TY+ LI G    G   +A +L + ++       D F
Sbjct: 600 FKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 220/459 (47%), Gaps = 20/459 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++ S R G     +  + S++A+   P   +   LI+ + Q RK  +A     +L  + 
Sbjct: 60  LLRMSRRRGASRREI--VSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHR 117

Query: 103 EP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            P    A NAL++   +A    LA +    + S     +  T NIM+ S C     + A 
Sbjct: 118 VPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGAD 177

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V  ++ +    P V+T+ +LI A    G  D A+ L+D M                 G+
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGL 237

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK     +A +  R+++     PDV S+N+L+     +G+ +E  K   EM  R + P+V
Sbjct: 238 CKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDV 297

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V++S LI    R G+ + A   LR  K  GL PD   Y  +I  +C+ G +  A+   D 
Sbjct: 298 VSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  GCLPD+V YNT+L   CK      A ++  ++ + G  P++ ++ T+       G+
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN 417

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL +   +L + + PD +TYNSLI  +CR G + +A  L  DM +    P  I+Y+I
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I   C+  ++ ++   L  M +KG  PN  TY  +I+G
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKG 516



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 150/290 (51%), Gaps = 3/290 (1%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A++ V S +S   + +  + N+++ +     +++  + +++EM  R + P+VVT+++LI
Sbjct: 143 EAYRLVLSSDS---EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLI 199

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +  R G  + A+ ++ +   +GL P   +Y+ ++   CK  R D A E    M      
Sbjct: 200 DARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+ ++N ++  FC+ G   +A++ ++++      P+V S++ +       G+   A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM   G+ PD + Y  +I   CR G + EA+ +  +M      P V++YN ++ G CK
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             R+ ++ ++L  M E+G  P+  T+  LI G    G    A++L + L+
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +AF+  R L          + N LL  L   G     ++    ++S   E N  T +I++
Sbjct: 105 EAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMV 164

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            S C+  + + A  V+   +++ + PD  +++ LI A  + G +D AI  +D M + G  
Sbjct: 165 HSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLK 224

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P IV YN++L   CK+   D+A E+F  +      P+V S+N +       G+   A+  
Sbjct: 225 PGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKF 284

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM  + + PD ++++ LI    R G +D A   L +M+     P  + Y ++I GFC+
Sbjct: 285 YKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCR 344

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              ++E++ V   M   GC P+  TY  L+ G+
Sbjct: 345 AGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 225/483 (46%), Gaps = 22/483 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E         F      +  +I    +AG   E+L  +++M+A  C P  V   
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+    +     +A  +  ++   G  P+   Y +LI GF K+ +++ A  + D +   
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ PDV+T+ +MI  LC  G  E A K F++++R  CKP V+TYT +IQ           
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ----------- 408

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ K G V  AF+ ++ + + GC PD ++Y  LL     +G+ +E  +L+ E+
Sbjct: 409 -------GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAV-DVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
                 PN+  YS L++ LC  G  E  + D+   +K    T D      +I   CK GR
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN--GNADQALEIFEKLSDVGCPPNVSSY 372
           LD A      M+S+GC PD   YN ++   C++     ++A  +   L  VG  P+  +Y
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             +   L   G+  RA+ M+ E  S+G   D + Y +L + LC  G VD AV L  +M  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P   +Y  II G  K +++ ++ +    M  KG KP   TY  L++ + + G   E
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 493 AME 495
           A  
Sbjct: 702 AFH 704



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 227/516 (43%), Gaps = 67/516 (12%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PNT   SF++       LI+   R  + D+++   E M    CKPD+     L+    + 
Sbjct: 152 PNT--FSFNI-------LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 86  RKSNKAVRVMEILEKYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
               KA  V   +   G   PD   + A++    KA +++ A +V  ++   GF PD + 
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN MI  L   G  + A KV D +L   C PT +TY IL+ +                  
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNS------------------ 304

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G + +A +  R + + G +P+ + Y  L+      G+ +E   L  EM+  G  P+
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+T++++I  LC+ G  E A          G  P+  +Y  +I    K GR+  A   + 
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            MI+ GC PD V Y  +L  FCK G  D+A ++ ++L      PN+  Y+++ + L   G
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484

Query: 384 DKIRAL-----------------------------GMISE-------MLSKGIEPDEITY 407
              + L                             G + E       M+S+G +PD  TY
Sbjct: 485 SVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 408 NSLISCLC--RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           N LI+ LC  R+  V+ A  LL D+E   + P  ++Y  + +G CK   ++ ++++L   
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +G   +   Y  L  G+ Y G    A+ L   +V
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV 640



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 212/456 (46%), Gaps = 56/456 (12%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G + DV     L+     E+  ++   + E + K G  P+ F++N LI  F +  + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQ 184
               + ++ +   PD+ T+ I++  LC  GM E AF+VF +++      P    +T +++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
             +   +  +A ++  +M  C                  G  PD I+YN ++  L   G 
Sbjct: 234 TLLKAKRVKEAREVFGQMEKC------------------GFPPDAIAYNTMIDGLAKAGH 275

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            +E  K++  M+++   P  VTY IL++SLC+ G  E A ++ R     G  P++  Y  
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI  + K GR+  A    D M+  G  PD++ +  ++   CK+GN +QA + FE++   G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C PNV +Y T+   L   G    A  ++  M++ G  PD +TY  L+   C+ G +DEA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 425 GLLVDMESTRFRPTVISYN------------------------------------IIILG 448
            LL +++     P +  Y+                                     II+G
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG 515

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            CKT R++E+  +   M  +GCKP+ TTY +LI G+
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 222/505 (43%), Gaps = 57/505 (11%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  L+    +AG  + +      M A+G +P+ V+ T LI  F +  +  +A  +  
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++E    PDV  +  +I G CK+   E A K  + +   G  P+VVTY  +I  L   G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            + +AF++   ++   C P  +TY  L+      G+ D+A +LLDE+             
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 203 ----------------------------------------GMCKKGMVGQAFQFVRSLES 222
                                                   G+CK G + +A +  + + S
Sbjct: 475 SLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 223 RGCQPDVISYNMLLRTLLNM--GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            GC+PD  +YN+L+  L      + E    L+ ++   G  P+ VTY+ L   LC+ G+ 
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEV 594

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + AV +L  A  +G   D  +Y  L +  C  G++D A+     M+  G  PD   Y  I
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG- 399
           +    K    + A + F+++   G  P V++Y  +  AL  +G+   A      ML++G 
Sbjct: 655 INGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGE 714

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +    + Y++LI   C+   VD A+ L  DM S    PT ++   +  G  ++ +  ++ 
Sbjct: 715 LVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI 484
           E+L  M   G  P+  T+  +++G+
Sbjct: 775 ELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 207/454 (45%), Gaps = 61/454 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G F+++    E M+  GCKP+VV  T +I+   +  +   A R+M+ +  +G  PD  
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES-------- 159
            Y  L+ GFCK  +++ A ++LD L     SP++  Y+ ++  LC  G +E         
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ 496

Query: 160 ----------------------------AFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
                                       A ++F +++ + CKP   TY ILI        
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN------- 549

Query: 192 TDKAMKLLDEMGMCK--KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                      G+C+  +  V +AF  +  LE  G  PD ++Y  L   L  +G+ +   
Sbjct: 550 -----------GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           K++ E  SRG   +VV Y+ L + LC  G+ + AV + +    +G  PDA +Y  +I+  
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPN 368
            K  +L+ A +F D MI  G  P +  Y  ++ A C  GN D+A   FE +   G    +
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V  Y+ +      +     AL +  +M+S+G  P  +T  SL   L R G  ++A  LL 
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +M +    P   ++  I+ G    R+ +ES ++L
Sbjct: 779 EMAAGGSPPHAATFTAILDGL---RKSDESGKLL 809



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 2/282 (0%)

Query: 209 MVGQAFQFVR-SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           + G A  F R + E  G Q DV +YN L+  L+    + +   +  EM+  G+ PN  ++
Sbjct: 98  VTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSF 157

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +ILI S  R  + +DAV      K K   PD +++  L+   CK G  + A E    M++
Sbjct: 158 NILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217

Query: 328 DGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            G + PD   +  ++    K     +A E+F ++   G PP+  +YNTM   L  +G   
Sbjct: 218 MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQ 277

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL ++  ML+K   P E+TY  L++ LC+ G ++ A  L   M ++ FRP  + Y  +I
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            GF K+ R+ E+  +   M E G +P+  T+ ++I+G+   G
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%)

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G + D  TYN L++ L  +    +   +  +M      P   S+NI+I  F +TRR +++
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +     M  K CKP+  T+++L++ +   G   +A E+ + +++M  +  D
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 233/453 (51%), Gaps = 25/453 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME- 96
           + F +L+    +   + +       M   G  PD+   + L        + ++A+  M  
Sbjct: 92  SSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAG 151

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +   P+V  Y  LI G C  ++I  A ++  R++  G +P+ VTY  +I  LC  G 
Sbjct: 152 ILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGN 211

Query: 157 IESAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           +  A K+  ++L D      NCKP VITY+I+I                   G+CK G  
Sbjct: 212 VNIALKLHKEMLNDASQYGVNCKPGVITYSIIID------------------GLCKVGRE 253

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    ++++G  PDVISY+ L+      GKW++ + L  EM+ +G++P++VT+S+L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I +LC++GK  +A  +L    ++G+ P+  +Y+ LI  +C  G L+ A E    M S G 
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD ++Y T++  +CK     +A+ ++ ++  VG  PNV++Y T+   L+  G    A  
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M + G+  +   Y   +  LC++  + EA+ L  +++S  F+  + +Y+ +I G C
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K  ++  + E+   + ++G +P+  TY ++I G
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 194/405 (47%), Gaps = 24/405 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + ++N L+ G  K N       + + +R  G SPD+ T +I+   LC+   +  A   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +LR    P V+TYT LI+                  G+C +  + +A +    ++  
Sbjct: 149 MAGILRRGYIPNVVTYTTLIK------------------GLCMEHRISEATRLFLRMQKL 190

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------PNVVTYSILISSLCRD 277
           GC P+ ++Y  L++ L   G      KL  EM++   +      P V+TYSI+I  LC+ 
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV 250

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ ++A ++    K +G+ PD  SY  LI  +C  G+ D +    D M+  G  PD+V +
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++   CK G   +A ++ E +   G  PN+ +YN++       GD   A  +   M S
Sbjct: 311 SVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS 370

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG+EPDEI+Y +LI+  C+   V EA+ L  +M      P V +Y  ++ G  +  ++ +
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + ++   M   G   N   Y + ++G+       EAMEL N L S
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 209/447 (46%), Gaps = 24/447 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LIK      +  E+      M   GC P+ V    LIK   Q    N A+++  E+L
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223

Query: 99  E---KYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               +YG   +P V  Y+ +I G CK  + + A ++ + ++++G  PDV++Y+ +I   C
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  + +  +FD+++    +P ++T+++LI     EG+  +A KLL+ M          
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C  G +  A +   S+ S+G +PD ISY  L+       K +E   L  EM
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  G  PNV TY  L+  L + GK  DA  +    K  G++ ++  Y   +   CK+  L
Sbjct: 404 LQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL 463

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+E  + + S     +I NY+ ++   CK G  + A E+FEKLS  G  P+V +YN M
Sbjct: 464 FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIM 523

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G    A  +  +M   G  PD I YN+L+   C    ++E + LL  M     
Sbjct: 524 IHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583

Query: 436 RPTVISYNIIILGFCKTRRINESIEVL 462
            P   S  I++   CK  +  + +++L
Sbjct: 584 SPNAASCTIVVDMLCKDEKYKKFVDLL 610



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 167/329 (50%), Gaps = 18/329 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK+D+S +  + MV  G +PD+V  + LI    +E K  +A +++E++ + G  P++  
Sbjct: 285 AGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT 344

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+LI GFC    +  A ++   + S+G  PD ++Y  +I   C    ++ A  +++++L
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P V TY  L++    +G+   A KL   M                 G+CK   + 
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLF 464

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +    L+S   + ++ +Y+ L+  L   GK E   +L  ++   GL+P+VVTY+I+I
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C+ G+ ++A  +    +E G TPD  +Y+ L+  +C+  +L+  I+ L  M+     
Sbjct: 525 HGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKL 360
           P+  +   ++   CK+    + +++  K 
Sbjct: 585 PNAASCTIVVDMLCKDEKYKKFVDLLPKF 613



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 43/342 (12%)

Query: 205 CKKGMVG--QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK G +   QAF F   +      P + S+N LL  L  +  + +   L  EM   GL P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ T SIL + LC   +  +A+  +     +G  P+  +Y  LI   C + R+  A    
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNA-------------------------------- 350
             M   GC P+ V Y T++   C+ GN                                 
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 351 ---------DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
                    D+A E+FE++   G  P+V SY+T+      +G   ++  +  EM+ +G++
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD +T++ LI  LC++G V EA  LL  M      P +I+YN +I GFC    +N + E+
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +M  KG +P+E +Y  LI G        EAM L N ++ +
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI    +  K  E++     M+  G  P+V     L+K  FQ+ K   A ++  
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++ YG   +   Y   + G CK + +  A ++ + L+S  F  ++  Y+ +I  LC  G
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +E+A+++F++L ++  +P V+TY I+I                   G CK G V  A  
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIH------------------GFCKVGQVDNANI 538

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +E  GC PD+I+YN LL       K EE  KL+ +M+ + + PN  + +I++  LC
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLC 598

Query: 276 RDGKTEDAVDVL 287
           +D K +  VD+L
Sbjct: 599 KDEKYKKFVDLL 610



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +F +    +  LI    +AGK + +    E +   G +PDVV    +I  F +  + + A
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             + E +E+ G  PD+ AYN L+ GFC+ N++E   K+L ++  +  SP+  +  I++  
Sbjct: 537 NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596

Query: 151 LCSRGMIESAFKVFDQLL 168
           LC     +  +K F  LL
Sbjct: 597 LCK----DEKYKKFVDLL 610


>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 245/503 (48%), Gaps = 28/503 (5%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVK-ETQFM--------KLIKRSFRAGKFDESLYFIE 61
           +SN   RV SS      T L S  +  E QF+        K+++     GK   +   +E
Sbjct: 75  ESNTGKRVESSELVHLVTSLNSSTLSAEGQFVRNGELTSNKILQSLCSRGKLTAAARLVE 134

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKAN 120
            M      P    CT LI+   +  + +K  ++M ++   G  PD   +NA+I   CK  
Sbjct: 135 VMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRG 194

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
            ++ A + L+ +   G  PD  TYN +I  +  +G    A   +   LR    P +ITY 
Sbjct: 195 HLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYA 254

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           +L++                   +CK     +A + +  +   GC PD+  YN L+    
Sbjct: 255 LLVEL------------------VCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSS 296

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G +++   +++ ++S G++PNVVTY+ILI SL   G ++   D+L+   E  ++P   
Sbjct: 297 KQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLV 356

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ L+++ CK G LD +I     M+S+ C PDIV YNT+L A CK G  D+++++   L
Sbjct: 357 TYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSL 416

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           S   C P + +YN + + L        A  M  EM+ KGI+PD IT+ +L+  LC+    
Sbjct: 417 SGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQF 476

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EAV +   M     +    +Y  +ILG C+ ++++ +I+ L  M +  CKP+   Y  L
Sbjct: 477 EEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTL 536

Query: 481 IEGIGYGGWRAEAMELANALVSM 503
           ++ +   G   EA +L   L+ +
Sbjct: 537 LKSVANEGMVNEANDLHQRLIEL 559



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 197/384 (51%), Gaps = 20/384 (5%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           +T N ++ SLCSRG + +A ++ + + R +  P   + T LI+  +  GQ DK  K+++ 
Sbjct: 111 LTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNM 170

Query: 202 MGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M M                 CK+G +  A +F+  +   GC PD  +YN ++R + + G 
Sbjct: 171 MVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGD 230

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
                    + + +G  P ++TY++L+  +C+      A++VL     +G  PD   Y+ 
Sbjct: 231 PNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNS 290

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L++   K G        +  ++S G  P++V YN ++ +   +G +D   +I + +++  
Sbjct: 291 LVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETS 350

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P + +YN + ++L  SG   R++ +  +M+S+   PD +TYN+L++ LC++G +DE++
Sbjct: 351 ISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESI 410

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL  +  T   P +++YNI+I G  + R I  + E+   M EKG  P+  T+  L+ G+
Sbjct: 411 QLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGL 470

Query: 485 GYGGWRAEAMELANALVSMHAISR 508
                  EA+E+      MH I +
Sbjct: 471 CQVYQFEEAVEIFKV---MHRIGQ 491


>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 395

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 27/387 (6%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VLDR       PDVVT   +I + C    +  A K+  +++   CKP V+TY +LI+   
Sbjct: 18  VLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVTYNVLIK--- 74

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+C +G + +A +F+++L S   Q DVISY ++L +L + GKW +
Sbjct: 75  ---------------GICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMD 119

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             KL+  M+  G  PNVVT++ LI+ LC  G    A++VL    + G TP+  SY+PLI 
Sbjct: 120 AMKLLASMLRNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIE 179

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            +C +   D  IE+   M+S GC  D V YN +L A CK+G  D A+EI  +LS  GC P
Sbjct: 180 GFCNEKSADRTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSP 239

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
            + +Y  +   L   G  +  + +  E+  K ++P+ IT+ S+   L R G V EA+   
Sbjct: 240 LLITY-IVIDGLLKVGKTVHVVVLFEEI--KALKPNLITFTSVEGGLSRKGKVHEAIQNF 296

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             +E    R +      II+G CKT++ + +I+ LA M E GCKP E TY +L++GI   
Sbjct: 297 RFLEGLGIRXS------IIMGLCKTQQTSRAIDFLAYMVENGCKPTEATYNILVKGITCE 350

Query: 488 GWRAEAMELANALVSMHAISRDTFKRL 514
           G   EA +L + L S   + +   +++
Sbjct: 351 GLPEEASKLWSELXSKGLVKKSLVEKM 377



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 186/382 (48%), Gaps = 28/382 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYN 110
           K  + +  ++  + + C PDVV CT+LI    +E    +A++++ E++ K  +P+V  YN
Sbjct: 11  KLKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVTYN 70

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G C   +++ A + L  L S     DV++Y I++ SLCS G    A K+   +LR+
Sbjct: 71  VLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMDAMKLLASMLRN 130

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P V+T+  LI                    +C KG++G+A   +  +   GC P+  
Sbjct: 131 GFSPNVVTFNTLINF------------------LCLKGLLGKALNVLEMMPKHGCTPNFR 172

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SYN L+    N    +   +    M+SRG   + VTY+IL+++LC+DGK +DA+++L   
Sbjct: 173 SYNPLIEGFCNEKSADRTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQL 232

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G +P   +Y  +I    K G+    +   + +      P+++ + ++     + G  
Sbjct: 233 SLNGCSPLLITY-IVIDGLLKVGKTVHVVVLFEEI--KALKPNLITFTSVEGGLSRKGKV 289

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A++ F  L  +G   ++         L  +    RA+  ++ M+  G +P E TYN L
Sbjct: 290 HEAIQNFRFLEGLGIRXSI------IMGLCKTQQTSRAIDFLAYMVENGCKPTEATYNIL 343

Query: 411 ISCLCRDGMVDEAVGLLVDMES 432
           +  +  +G+ +EA  L  ++ S
Sbjct: 344 VKGITCEGLPEEASKLWSELXS 365



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 7/261 (2%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K +  V VL    +    PD  +   LI A CK+  +  A++ L  M+S GC P++V 
Sbjct: 9   ESKLKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVT 68

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   C  G  D+A+   + L       +V SY  +  +L S G  + A+ +++ ML
Sbjct: 69  YNVLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMDAMKLLASML 128

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  P+ +T+N+LI+ LC  G++ +A+ +L  M      P   SYN +I GFC  +  +
Sbjct: 129 RNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIEGFCNEKSAD 188

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL-------VSMHAISRD 509
            +IE    M  +GC  +  TY +L+  +   G   +A+E+ N L       + +  I  D
Sbjct: 189 RTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSPLLITYIVID 248

Query: 510 TFKRLNRTFPLLDVYKEISHL 530
              ++ +T  ++ +++EI  L
Sbjct: 249 GLLKVGKTVHVVVLFEEIKAL 269


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 226/423 (53%), Gaps = 22/423 (5%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGF 116
           Y + S +     P+ +    +IK   + R  ++A+ V   + E+   PD + Y  L+ G 
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           CK  +I+ A  +LD ++S G SP  V YN++I  LC +G +    K+ D +    C P  
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  LI    L+G+ DKA+ LL+ M                   S  C P+ ++Y  L+
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERM------------------VSSKCIPNDVTYGTLI 334

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L+   +  +  +L++ M  RG   N   YS+LIS L ++GK E+A+ + R   EKG  
Sbjct: 335 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+   Y  L+   C++G+ + A E L+ MI+ GCLP+   Y++++  F K G  ++A+++
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           ++++   GC  N   Y+ +   L   G    A+ + S+ML+ GI+PD + Y+S+I  LC 
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514

Query: 417 DGMVDEAVGLLVDM---ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            G +D A+ L  +M   E  + +P V++YNI++ G C  + I+ ++++L +M ++GC P+
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574

Query: 474 ETT 476
             T
Sbjct: 575 VIT 577



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 18/392 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I+       +E  + V++   +   SP+ +++N++I +LC    ++ A +VF  +  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P   TY  L+     E + D+A+ LLDEM                  +S GC P  
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM------------------QSEGCSPSP 257

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN+L+  L   G      KL+  M  +G  PN VTY+ LI  LC  GK + AV +L  
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                  P+  +Y  LI+   K  R   A+  L  M   G   +   Y+ +++   K G 
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
           A++A+ ++ K+++ GC PN+  Y+ +   L   G    A  +++ M++ G  P+  TY+S
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+    + G+ +EAV +  +M+ T        Y+++I G C   R+ E++ V + M   G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            KP+   Y  +I+G+   G    A++L + ++
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 199/466 (42%), Gaps = 76/466 (16%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D ++     M    C PD      L+    +E + ++AV +++ ++  G  P    YN L
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G CK   +    K++D +  +G  P+ VTYN +I  LC +G ++ A  + ++++   C
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
            P  +TY  LI   + + +   A++LL  M                 G+ K+G   +A  
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------- 268
             R +  +GC+P+++ Y++L+  L   GK  E ++++  MI+ G  PN  TYS       
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443

Query: 269 ----------------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
                                       +LI  LC  G+ ++A+ V       G+ PD  
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +Y  +I   C  G +D A++    M+        PD+V YN +L   C   +  +A+++ 
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563

Query: 358 EKLSDVGCPPNVSSYNTMFSAL---WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             + D GC P+V + NT  + L    +S DK R+                     L+  L
Sbjct: 564 NSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF-----------------LEELVVRL 606

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            +   V  A  ++  M      P   ++ +I+   CK ++IN +I+
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL---EKYGEPD 105
            G+  E++     M+  G KPD V  + +IK        + A+++  E+L   E   +PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           V  YN L+ G C    I  A  +L+ +  RG  PDV+T N  + +L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 228/457 (49%), Gaps = 25/457 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           RAG+   +L     M  +   PD +  TKL+    + R+   AV+V+ E++     PD  
Sbjct: 17  RAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT 75

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
               ++   C  ++++ A ++++ +  RG + + +TY+ ++  LC    ++ A  + + +
Sbjct: 76  TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETM 135

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C PTV+TY  +I                   G C+   V +A  F+  + + GC P
Sbjct: 136 AERGCAPTVVTYNSIIT------------------GFCRARRVDEAHGFMEQMVAEGCHP 177

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+I+Y  L+           G +L+ E+  RG  P++VTYS +I  LC+ G+  DAVD+ 
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 237

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +E    P A +Y+ LI  YC+ G +D AI  L  M+ D C PD+V Y T+++AFCK 
Sbjct: 238 ---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM 294

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D A E+F+++      P+V ++ ++   L   G    AL ++ E+  +G  P   TY
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 354

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N ++   C+   V +A  L+ D  S  F P  ++YNI++ G C+  R +++++ L  +  
Sbjct: 355 NCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 414

Query: 468 KG--CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +G  C  +   Y ++++ +   G   +A++    ++ 
Sbjct: 415 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 224/451 (49%), Gaps = 31/451 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    +N +I G C+A ++  A  V  R  +    PD +TY  ++  L     +  A +V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             +++     P   T T+++Q+  L  + D A +L++EM                 G+CK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              + +A   V ++  RGC P V++YN ++       + +E    M +M++ G  P+++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C+       +++L     +G TPD  +Y  +I   CK GRL  A++  + M 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM- 240

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
              C P  + YN+++  +C+ G+ D+A+ +  K+ D  C P+V +Y T+ SA    G   
Sbjct: 241 --SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  +M++  + PD +T+ SL+  LC +G +++A+ LL ++      PT+ +YN ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL------ 500
            G+CK  ++ ++ E++A    +G  PN  TY +L+ G    G   +A++  + L      
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 418

Query: 501 ----VSMHAISRDTFKRLNRTFPLLDVYKEI 527
               V+M+AI  D   R  RT   +  Y+E+
Sbjct: 419 CPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 210/404 (51%), Gaps = 23/404 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    +  + DE++  +E+M   GC P VV    +I  F + R+ ++A   ME + 
Sbjct: 112 YSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMV 171

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  Y ALI GFCK+  +    ++L  +  RGF+PD+VTY+ +I  LC  G + 
Sbjct: 172 AEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 231

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+++   +C PT ITY  LI      G  D+A++LL +M                
Sbjct: 232 DAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLM 288

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              CK G +  A++  + + +    PDV+++  L+  L   G+ E+  +L+ E+  RG  
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P + TY+ ++   C+  +   A +++   + +G  P+  +Y+ L++  C+ GR D A+++
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408

Query: 322 LDYMISDG--CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           LD + S+G  C   +  Y  IL A C++G  D A++ +E++   G  P  +++ T+  AL
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
             +    +A  ++ EM+  G  P   T ++++S  CR GM+ +A
Sbjct: 469 CKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 193/376 (51%), Gaps = 23/376 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +I    RA + DE+  F+E MVA GC PD++  T LI  F + R   + + ++ E+ 
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   PD+  Y+ +I G CKA ++  A  + + +     +P  +TYN +IG  C  G ++
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMD 263

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  +++ D C P V+TYT L+ A    G+ D A +L  +M                
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C +G +  A + +  +  RGC P + +YN ++       +  + E+L+ +  SRG  
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFV 383

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYS-YDPLISAYCKDGRLDLAI 319
           PN VTY+IL++  CR G+T+ A+  L +   E G  P + + Y  ++ A C+DGR D A+
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +F + MI  G +P    + T++ A CK     QA E+ E++   G  P   + + + SA 
Sbjct: 444 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503

Query: 380 WSSGDKIRALGMISEM 395
             +G   +A  + SE+
Sbjct: 504 CRAGMIQKADELASEL 519



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P  + +N +I  LCR G +  A+G+   M      P  ++Y  ++ G  K RR+ +++
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +VL  M      P+ TT  ++++ +  G    +A EL   ++
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 101


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 259/544 (47%), Gaps = 73/544 (13%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R++++    PN +          +  +++     G+  ++L  ++ M +  C P   M  
Sbjct: 105 RLAAAVPVPPNAY---------TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYH 155

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSR 135
            +I+   +    + A+RV+E L   G   D    N +I+  C    ++   ++L +L   
Sbjct: 156 VIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLF 215

Query: 136 GFSPDVVTYNIMIGSLCSR---GMIES-------AFKVFDQLLRDNCKPTVITYTILIQA 185
           G   D+V+YN ++  LC+    G +E          +   Q+ +  C P +  Y  +I  
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIID- 274

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK+G    A + +  + S G +P+V+ YN +L+ + +  +W
Sbjct: 275 -----------------GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRW 317

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E+ E+L+TEM  +    + VT++IL+   C++G  +  +++L    E G  PD  +Y  +
Sbjct: 318 EKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377

Query: 306 ISAYCKDGRLDLAI-----------------------------------EFLDYMISDGC 330
           I+ +CK+G +D A+                                   E +  MI  GC
Sbjct: 378 INGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP+ V +NTI+   CK G  +QA+E+ +++   GC P++ SY+T+   L  +G    AL 
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++ M++KGI P+ ITY+S+   L R+G +D+ + +  +++    R   + YN +I   C
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLC 557

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K R  + +I+ LA M   GC PNE+TY  LI+G+   G   EA +L + L S  A+ +  
Sbjct: 558 KRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHL 617

Query: 511 FKRL 514
            +R 
Sbjct: 618 TRRF 621



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 224/464 (48%), Gaps = 67/464 (14%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           + LI+      ++  AVR ++         V  YNA+++G+C+  Q+E A ++   +   
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAA--GVVDYNAMVAGYCRVGQVEAARRLAAAVP-- 111

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              P+  TY  ++  LC RG I  A  V D++   +C P    Y ++I++    G    A
Sbjct: 112 -VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA 170

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +++L+ +                  +C +G V +  + +R L   GC+ D++SYN +L+ 
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKG 230

Query: 239 LLNMGKWEEGEKLMTEMI------------------------------------------ 256
           L    +W + E+LM EM+                                          
Sbjct: 231 LCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290

Query: 257 ---SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
              S GL+PNVV Y+ ++  +C   + E A ++L    +K    D  +++ L+  +C++G
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNG 350

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            +D  IE L+ M+  GC+PD++ Y T++  FCK G  D+A+ + + +   GC PN  SY 
Sbjct: 351 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYT 410

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L S+   + A  ++S M+ +G  P+ +T+N++I+ LC+ G+V++A+ LL  M   
Sbjct: 411 IVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN 470

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
              P +ISY+ +I G  K  +  E++E+L  M  KG  PN  TY
Sbjct: 471 GCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 62/379 (16%)

Query: 182 LIQATMLEGQTDKAMKLLDEMG--------------MCKKGMVGQAFQFVRSLESRGCQP 227
           LI++  + G+T  A++ LD  G               C+ G V  A +   ++      P
Sbjct: 58  LIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPV---PP 114

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +  +Y  ++R L   G+  +   ++ EM SR   P    Y ++I S CR G    A+ VL
Sbjct: 115 NAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVL 174

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN--------- 338
            A   KG T D  + + +I+A C  G +D  +E L  +   GC  DIV+YN         
Sbjct: 175 EALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAA 234

Query: 339 ------------------------------------TILAAFCKNGNADQALEIFEKLSD 362
                                               TI+   CK G+ + A EI  ++  
Sbjct: 235 KRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS 294

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  PNV  YNT+   + S+    +A  +++EM  K    D++T+N L+   C++G+VD 
Sbjct: 295 YGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDR 354

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            + LL  M      P VI+Y  +I GFCK   I+E++ +L  M   GCKPN  +Y ++++
Sbjct: 355 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLK 414

Query: 483 GIGYGGWRAEAMELANALV 501
           G+       +A EL + ++
Sbjct: 415 GLCSTERWVDAEELMSRMI 433



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 74/303 (24%)

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKG-----------------------------LTPD 298
           S LI SLC  G+T DAV  L AA                                 + P+
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVPPN 115

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP-------------------------- 332
           AY+Y P++   C  GR+  A+  LD M S  C+P                          
Sbjct: 116 AYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLE 175

Query: 333 ---------DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS- 382
                    D  N N ++ A C  G  D+ LE+  KL   GC  ++ SYN +   L ++ 
Sbjct: 176 ALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAK 235

Query: 383 --GD-------KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             GD        ++    +S+M   G  PD   Y ++I  +C++G  + A  +L  M S 
Sbjct: 236 RWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSY 295

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P V+ YN ++ G C   R  ++ E+L  M++K C  ++ T+ +L++     G     
Sbjct: 296 GLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRV 355

Query: 494 MEL 496
           +EL
Sbjct: 356 IEL 358


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 233/462 (50%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVM-EI 97
           F  ++K   R    D++L  +    A+G  P V+    ++    + +++ + A  V  E+
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           LE    P+VF YN LI GFC A  I++A  + D++ ++G  P+VVTYN +I   C    I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +  FK+   +     +P +I+Y ++I     EG+  +   +L EM               
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CK+G   QA      +   G  P VI+Y  L+ ++   G      + + +M  RGL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN  TY+ L+    + G   +A  VLR   + G +P   +Y+ LI+ +C  G+++ AI 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+ M   G  PD+V+Y+T+L+ FC++ + D+AL +  ++ + G  P+  +Y+++     
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                  A  +  EML  G+ PDE TY +LI+  C +G +++A+ L  +M      P V+
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +Y+++I G  K  R  E+  +L  +F +   P++ TY  LIE
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 33/472 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  D +L   + M   GC P+VV    LI  + + RK +   +++  +   G EP++ +
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I+G C+  +++  + VL  +  RG+S D VTYN +I   C  G    A  +  ++L
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMC--------------KKGMVG 211
           R    P+VITYT LI +    G  ++AM+ LD+M   G+C              +KG + 
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A++ +R +   G  P V++YN L+      GK E+   ++ +M  +GL P+VV+YS ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  CR    ++A+ V R   EKG+ PD  +Y  LI  +C+  R   A +  + M+  G  
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y  ++ A+C  G+ ++AL++  ++ + G  P+V +Y+ + + L        A  +
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 392 ISEMLSKGIEPDEITYN---------------SLISCLCRDGMVDEAVGLLVDMESTRFR 436
           + ++  +   P ++TY+               SLI   C  GM+ EA  +   M     +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           P   +YNI+I G C+   I ++  +   M + G   +  T + L++ +   G
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 217/415 (52%), Gaps = 20/415 (4%)

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELANKVLDRLRSRGFSPDVVTYNI 146
           +KA+ ++ + + +G  P V +YNA++    ++ + I  A  V   +     SP+V TYNI
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I   C  G I+ A  +FD++    C P V+TY  LI                   G CK
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID------------------GYCK 252

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              +   F+ +RS+  +G +P++ISYN+++  L   G+ +E   ++TEM  RG   + VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C++G    A+ +       GLTP   +Y  LI + CK G ++ A+EFLD M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P+   Y T++  F + G  ++A  +  +++D G  P+V +YN + +    +G   
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ +M  KG+ PD ++Y++++S  CR   VDEA+ +  +M     +P  I+Y+ +I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            GFC+ RR  E+ ++   M   G  P+E TY  LI      G   +A++L N +V
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 209/389 (53%), Gaps = 19/389 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN-IMIGSLCSRGMIESAFKVFDQL 167
           ++ ++  + + + I+ A  ++   ++ GF P V++YN ++  ++ S+  I  A  VF ++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L     P V TY ILI+     G  D A+ L D+M                  E++GC P
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM------------------ETKGCLP 238

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++YN L+     + K ++G KL+  M  +GLEPN+++Y+++I+ LCR+G+ ++   VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G + D  +Y+ LI  YCK+G    A+     M+  G  P ++ Y +++ + CK 
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++A+E  +++   G  PN  +Y T+       G    A  ++ EM   G  P  +TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI+  C  G +++A+ +L DM+     P V+SY+ ++ GFC++  ++E++ V   M E
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           KG KP+  TY  LI+G        EA +L
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDL 507



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 204/457 (44%), Gaps = 34/457 (7%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           + + E  +  LIK   + G F ++L     M+ +G  P V+  T LI    +    N+A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             ++ +   G  P+   Y  L+ GF +   +  A +VL  +   GFSP VVTYN +I   
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G +E A  V + +      P V++Y+ ++                   G C+   V 
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS------------------GFCRSYDVD 467

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +  R +  +G +PD I+Y+ L++      + +E   L  EM+  GL P+  TY+ LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           ++ C +G  E A+ +     EKG+ PD  +Y  LI+   K  R   A   L  +  +  +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 332 PDIVNYNT---------------ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           P  V Y+T               ++  FC  G   +A ++FE +      P+ ++YN M 
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                +GD  +A  +  EM+  G     +T  +L+  L ++G V+E   ++V +  +   
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
                  +++    +   ++  ++VLA M + G  PN
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           D C      ++ ++ ++ +    D+AL I       G  P V SYN +  A   S   I 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 388 -ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EML   + P+  TYN LI   C  G +D A+ L   ME+    P V++YN +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
            G+CK R+I++  ++L +M  KG +PN  +Y ++I G+   G   E
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 237/464 (51%), Gaps = 21/464 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KF+  +   E M   G   D+   +  I  F +  + + A+ V+  +
Sbjct: 85  EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EPD+   ++L++G+C + +I  A  ++D++   G+ PD  T+  +I  L      
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + DQ+++  C+P ++TY  ++      G  D A+ LL++M               
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK   V  A      +E++G +P+V++YN L+  L N G+W +  +L++ M+ + +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVVT++ LI +  ++GK  +A  +     ++ + PD  +Y+ LI+ +C   RLD A +
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
              +M+S  CLP+I  YNT++  FCK    +  +E+F ++S  G   N  +Y T+    +
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +GD   A  +  +M+S  +  D +TY+ L+  LC  G +D A+ +   ++ +     + 
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            YN +I G CK  ++ E+ ++  ++     KP+  TY  +I G+
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 18/385 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N L+S   K N+ EL   + +++++ G S D+ TY+I I   C R  +  A  V
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P ++T + L+                   G C    +  A   V  +   
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLN------------------GYCHSKRISDAVALVDQMVEM 182

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD  ++  L+  L    K  E   L+ +M+ RG +P++VTY  +++ LC+ G  + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L   +   +  +   ++ +I + CK   +++A++    M + G  P++V YN+++  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G    A  +   + +    PNV ++N +  A +  G  + A  +  EM+ + I+PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITYN LI+  C    +DEA  +   M S    P + +YN +I GFCK +R+ + +E+  
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGG 488
            M ++G   N  TY  +I+G    G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAG 447



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 192/414 (46%), Gaps = 21/414 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI   F   K  E++  ++ MV  GC+PD+V    ++    +    + A+ ++  +E
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               + +V  +N +I   CK   +E+A  +   + ++G  P+VVTYN +I  LC+ G   
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++   +L     P V+T+  LI A   EG+  +A KL +EM                
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C    + +A Q  + + S+ C P++ +YN L+       + E+G +L  EM  RGL 
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            N VTY+ +I    + G  + A  V +      +  D  +Y  L+   C  G+LD A+  
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
             Y+       +I  YNT++   CK G   +A ++F  LS     P+V +YNTM S L S
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCS 547

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 A  +  +M   G  P+  TYN+LI    RD     +  L+ +M S+ F
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 147/271 (54%), Gaps = 2/271 (0%)

Query: 232 YNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           Y  +LR  L ++ K ++   L  +M+     P++V ++ L+S++ +  K E  + +    
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D Y+Y   I+ +C+  +L LA+  L  M+  G  PDIV  +++L  +C +   
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             A+ + +++ ++G  P+  ++ T+   L+       A+ ++ +M+ +G +PD +TY ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC+ G +D A+ LL  ME+ R +  V+ +N II   CK R +  ++++   M  KG 
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289

Query: 471 KPNETTYVLLIEGI-GYGGWRAEAMELANAL 500
           +PN  TY  LI  +  YG W   +  L+N L
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNML 320



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 23/286 (8%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S D     +  LI       + DE+    + MV+  C P++     LI  F + ++    
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           V +   + + G   +   Y  +I GF +A   + A  V  ++ S     D++TY+I++  
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LCS G +++A  +F  L +   +  +  Y  +I+                  GMCK G V
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE------------------GMCKAGKV 519

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+A+    SL     +PDV++YN ++  L +    +E + L  +M   G  PN  TY+ L
Sbjct: 520 GEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           I +  RD     + ++++  +  G   DA S   L++    DGRLD
Sbjct: 577 IRANLRDCDRAASAELIKEMRSSGFVGDA-STISLVTNMLHDGRLD 621



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 22/179 (12%)

Query: 354 LEIFEKLSDVGCPPNVSSY-NTMFSALW------SSGD-------------KIR-ALGMI 392
           L +   L  +G PP V S+ N   S  W      +SGD             K+  A+ + 
Sbjct: 12  LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+     P  + +N L+S + +    +  + L   M++      + +Y+I I  FC+ 
Sbjct: 72  GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            +++ ++ VLA M + G +P+  T   L+ G  +    ++A+ L + +V M     DTF
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM-GYKPDTF 189


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 232/476 (48%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P  +    ++    ++  +  A+ ++  +E
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  Y+A+I   CK  +   A  +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM--------------- 351

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+YN ++       + +  E +   M ++G  P+V T++ LI   C  
Sbjct: 352 ---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L     +GL  +  +Y+ LI  +C  G L+ A++    MIS G  PDIV  
Sbjct: 409 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 468

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +              G  P+V +YN +   L + G  +
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 528

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  + V M S  F P V+++N +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   +   Y+ LI G    G    A+++   ++S
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 224/480 (46%), Gaps = 65/480 (13%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKV 128
           P VV   KL+    +  + +  + + + +E K    D++++N LI  FC  +++  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++   G  PDVVT+  ++  LC    +  A   F Q+    C+P V+T+T L+     
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES--------- 222
           EG+  +A+ LLD M                 GMCKKG    A   +R +E          
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 223 ---------------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                                      +G  PD+ +YN ++    + G+W + E+L+ EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + R + P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y+ +I  +CK  RL
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A +    M + GC PD+  + T++  +C     D  +E+  ++   G   N  +YNT+
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  GD   AL +  +M+S G+ PD +T N+L+  LC +G + +A+ +   M+ ++ 
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 436 -----------RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                       P V++YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 202/428 (47%), Gaps = 20/428 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL   F + +    A+ +  ++L     P V  +  L+    +  + +L   +  ++  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
               D+ ++NI+I   CS   +  A   F ++ +    P V+T+T L+            
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH----------- 157

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C +  V +A  F   +    C+P+V+++  L+  L   G+  E   L+  M
Sbjct: 158 -------GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKDGR 314
           +  GL+P  +TY  ++  +C+ G T  A+++LR  +E   + P+   Y  +I + CKDGR
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A      M   G  PD+  YN+++  FC +G    A ++ +++ +    P+V +YN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +A    G    A  +  EML +GI P+ ITYNS+I   C+   +D A  +   M +  
Sbjct: 331 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V ++  +I G+C  +RI++ +E+L  M  +G   N  TY  LI G    G    A+
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 450

Query: 495 ELANALVS 502
           +L+  ++S
Sbjct: 451 DLSQQMIS 458



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 189/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN++I GFCK ++++ A  +   + ++G SPDV T+  +I   C    I+   ++  ++ 
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R       +TY  LI    L G  + A+ L  +M                 G+C  G + 
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  ++++             G +PDV++YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  +++ LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + D + Y T++  F K GN + AL+IF+++   G  P+  +   M +  W
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELERAVAMLEDL 677



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TYN MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P V T+T LI       + D  M+LL EM                 G C  G +
Sbjct: 387 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A    + + S G  PD+++ N LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V+TY+ILI  L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M S    P++V +NT++  +CK G  D  LE+F ++   G   +   Y T+    
Sbjct: 567 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++       ++ AV +L D++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAY 109
           GKF E+    E M   G  PD +  + +I    ++ + ++A ++ + +  K   P+V  +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+CKA +++   ++   +  RG   D + Y  +I      G I  A  +F +++ 
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
               P  IT   ++     + + ++A+ +L+++ M
Sbjct: 645 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 230/451 (50%), Gaps = 21/451 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE----KYGEPDVFAYNALISGFCKANQI 122
           GC P+VV    L+K F  E ++ +A+ ++ ++     +   P++ +YN +I+GF    Q+
Sbjct: 161 GCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQV 220

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A  +   +  +G  P+VVTY I+I  LC   +++ A  VF Q++    +P ++TYT L
Sbjct: 221 DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280

Query: 183 IQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGC 225
           I   +  GQ  + +++L EM                  +CKKG   +A +   S+  +G 
Sbjct: 281 IHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI 340

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +PDV  Y ++L      G   E    +  M+  G+ PN   ++I+  +  +     +A+D
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMD 400

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +    +++GL+P+  +Y  LI A CK GR+D A    + MI++G  P+IV + +++   C
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
                ++A E+F ++ + G  PNV  +NT+   L + G  ++A  +I  M   G  PD I
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           +YN+LI   C  G  DEA  LL  M S   +P   +YN ++ G+C+  RI+++  V   M
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              G  P   TY  ++ G+      +EA EL
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKEL 611



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 220/464 (47%), Gaps = 68/464 (14%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           P+V +YN L+ GFC  N+ E A ++L  +   + R   P++V+YN +I    + G ++ A
Sbjct: 164 PNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA 223

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           + +F  +      P V+TYTI+I                   G+CK  +V +A    + +
Sbjct: 224 YNLFLDMTDQGIPPNVVTYTIVID------------------GLCKAQVVDRAEGVFQQM 265

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G +P++++Y  L+   L++G+W+E  +++ EM + GLEP+  TY +L+  LC+ GK 
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A  +  +   KG+ PD   Y  ++  Y   G L     FLD M+ +G  P+   +N +
Sbjct: 326 TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG----------------- 383
             AF K     +A++IF K+   G  PNV +Y T+  AL   G                 
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 384 -----------------DKIRALG-MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
                            DK    G +  EM+++GI P+ + +N+++  LC +G V +A  
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L+  ME    RP +ISYN +I G C   + +E+ ++L  M   G KPNE TY  L+ G  
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 486 YGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
             G   +A  +   ++S            N   P++  Y  I H
Sbjct: 566 RDGRIDDAYSVFQEMLS------------NGITPVVVTYNTILH 597



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 234/482 (48%), Gaps = 23/482 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           +I   F  G+ D++      M   G  P+VV  T +I    + +  ++A  V + +++K 
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++  Y  LI G+    Q +   ++L  + + G  PD  TY +++  LC +G    A 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+FD ++R   KP V  Y I++     +G   +    LD M                   
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            KK M+G+A      +  +G  P+V++Y  L+  L  +G+ ++ E    +MI+ G+ PN+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V ++ L+  LC   K E A ++      +G+ P+   ++ ++   C +GR+  A   +D 
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  PDI++YN ++   C  G  D+A ++ + +  VG  PN  +YNT+       G 
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EMLS GI P  +TYN+++  L +     EA  L ++M ++  + ++ +YNI
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANA 499
           I+ G  K   ++E++++  ++  K  + +  T+ ++I  +   G + +AM L     AN 
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689

Query: 500 LV 501
           LV
Sbjct: 690 LV 691



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    +SM+  G KPDV +   ++  +  +   ++    ++++   G  P+ +
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N +   F K   I  A  + +++R +G SP+VV Y  +I +LC  G ++ A   F+Q+
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P ++ +T L+       + +KA +L  EM                  +C +G V
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +E  G +PD+ISYN L+R    +GK +E  KL+  M+S GL+PN  TY+ L
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   CRDG+ +DA  V +     G+TP   +Y+ ++    K  R   A E    MI+ G 
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
              I  YN IL    KN   D+AL++F+ L       ++ ++N M  AL   G K  A+ 
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ PD  TY  +   L  +G ++E  G+  +ME +   P  +  N ++    
Sbjct: 681 LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               I+ +   L+ + EK      +T  +LI
Sbjct: 741 LRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 189/381 (49%), Gaps = 18/381 (4%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKYGEPDVFAYNALI 113
           E++     M   G  P+VV    LI    +  R  +  ++  +++ +   P++  + +L+
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G C  ++ E A ++   + ++G  P+VV +N ++ +LC+ G +  A ++ D + R   +
Sbjct: 457 YGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR 516

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P +I+Y  LI+   L G+TD+A KLLD M                 G C+ G +  A+  
Sbjct: 517 PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSV 576

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + + S G  P V++YN +L  L    ++ E ++L   MI+ G + ++ TY+I+++ L +
Sbjct: 577 FQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSK 636

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +   ++A+ + ++   K L  D  +++ +I A  KDGR + A+     + ++G +PD+  
Sbjct: 637 NNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTT 696

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  I     + G+ ++   +F ++   GC PN    N +   L   GD  RA   +S++ 
Sbjct: 697 YRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKID 756

Query: 397 SKGIEPDEITYNSLISCLCRD 417
            K    +  T + LIS   R+
Sbjct: 757 EKNFSLEASTTSMLISLFSRE 777


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 226/423 (53%), Gaps = 22/423 (5%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGF 116
           Y + S +     P+ +    +IK   +    ++A+ V   + EK   PD + Y  L+ G 
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGL 232

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           CK  +I+ A  +LD ++S G SP  V YN++I  LC +G +    K+ D +    C P  
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNE 292

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  LI    L+G+ DKA+ LL+ M                   S  C P+ ++Y  L+
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERM------------------VSSKCIPNDVTYGTLI 334

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L+   +  +G +L+  M  RG   N   YS+LIS L ++GK E+A+ + +   EKG  
Sbjct: 335 NGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCR 394

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+   Y  +I   C++G+ + A E L+ MIS GCLP++  Y++++  F K G +++A+++
Sbjct: 395 PNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQV 454

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           + ++ + GC  N   Y+ +   L   G    A+ + S+ML+ GI+PD + Y+S+I  LC 
Sbjct: 455 WREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCG 514

Query: 417 DGMVDEAVGLLVDM---ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            G +D A+ L  +M   E  + +P V++YNI++ G C  + ++ ++++L  M ++GC P+
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPD 574

Query: 474 ETT 476
             T
Sbjct: 575 VIT 577



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 191/393 (48%), Gaps = 26/393 (6%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN----CKPTVI 177
           ++L ++++D  R +     V ++N ++  + + G+     + +D ++  N      P  +
Sbjct: 132 VDLFHRMVDEFRCKR---SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           ++ ++I+A                  +CK G V +A +  R +  + C PD  +Y  L+ 
Sbjct: 189 SFNLVIKA------------------LCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMD 230

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L    + +E   L+ EM S G  P+ V Y++LI  LC+ G       ++     KG  P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFP 290

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI   C  G+LD A+  L+ M+S  C+P+ V Y T++    K   A     + 
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLL 350

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             + + G   N   Y+ + S L+  G    A+ +  +M  KG  P+ + Y+++I  LCR+
Sbjct: 351 ISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCRE 410

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  +EA  +L  M S+   P V +Y+ ++ GF KT    E+I+V   M E GC  NE  Y
Sbjct: 411 GKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCY 470

Query: 478 VLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
            +LI+G+   G   EAM + + ++++  I  DT
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTI-GIKPDT 502



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 187/392 (47%), Gaps = 18/392 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I+       +E  + V++   +   SP+ +++N++I +LC  G ++ A +VF  +  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPE 215

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P   TY  L+                   G+CK+  + +A   +  ++S GC P  
Sbjct: 216 KKCLPDGYTYCTLMD------------------GLCKEERIDEAVLLLDEMQSEGCSPSP 257

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN+L+  L   G      KL+  M  +G  PN VTY+ LI  LC  GK + AV +L  
Sbjct: 258 VIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLER 317

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                  P+  +Y  LI+   K  R       L  M   G   +   Y+ +++   K G 
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGK 377

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
           A++A+ +++K+++ GC PN+  Y+ +   L   G    A  +++ M+S G  P+  TY+S
Sbjct: 378 AEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSS 437

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+    + G+ +EA+ +  +M+ T        Y+++I G C   R+ E++ V + M   G
Sbjct: 438 LMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            KP+   Y  +I+G+   G    A++L + ++
Sbjct: 498 IKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 199/476 (41%), Gaps = 70/476 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +IK   + G  D ++     M    C PD      L+    +E + ++AV +++ ++
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P    YN LI G CK   +    K++D +  +G  P+ VTYN +I  LC +G ++
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLD 309

Query: 159 SAFKVFDQLLRDNCKPTVITY-----------------------------------TILI 183
            A  + ++++   C P  +TY                                   ++LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLI 369

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
                EG+ ++AM L  +M                 G+C++G   +A + +  + S GC 
Sbjct: 370 SGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCL 429

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V +Y+ L++     G  EE  ++  EM   G   N   YS+LI  LC  G+ ++A+ V
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMV 489

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILAA 343
                  G+ PD  +Y  +I   C  G +D A++    M+        PD+V YN +L  
Sbjct: 490 WSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C   +  +A+++   + D GC P+V + NT  + L    D                E  
Sbjct: 550 LCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD--------------SCEEG 595

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
                 L++ L +   V  A  ++  M      P   ++ +I+   CK ++IN +I
Sbjct: 596 RSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 178/392 (45%), Gaps = 36/392 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI      GK D+++  +E MV++ C P+ V    LI    ++R++    R++ 
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E+ G   +   Y+ LISG  K  + E A  +  ++  +G  P++V Y+ +I  LC  G
Sbjct: 352 SMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A ++ + ++   C P V TY+ L++                  G  K G+  +A Q
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMK------------------GFFKTGLSEEAIQ 453

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             R ++  GC  +   Y++L+  L  +G+ +E   + ++M++ G++P+ V YS +I  LC
Sbjct: 454 VWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513

Query: 276 RDGKTEDAVDV---LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             G  + A+ +   +   +E    PD  +Y+ L+   C    +  A++ L+ M+  GC P
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDP 573

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D++  NT L    +  ++              C    S    + + L        A  ++
Sbjct: 574 DVITCNTFLNTLSEKSDS--------------CEEGRSFLEELVARLLKRQRVSGACKIV 619

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             ML K + P   T+  ++  +C+   ++ A+
Sbjct: 620 EVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 228/464 (49%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E     GC P V+    ++    ++ K  +A+R+ + + +   P++  Y
Sbjct: 356 AGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTY 415

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   CKA ++E A KV D ++  G  P+++T NIMI  LC    ++ A  +F  L  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P   T+  LI      G+ D A  L ++M                    K G    
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +  RGC PD++  N  +  +   G+ E+G  L  E+ ++GL P+V +YSILI 
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIH 595

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G + +   +    KE+GL  D  +Y+ +I  +CK G++D A + L+ M + G  P
Sbjct: 596 GLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQP 655

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+   +G   NV  Y+++       G    A  ++
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   +DEA     +M++ +  P  ++Y+I+I G C  
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M ++G KPN  TY  +I G+   G   EA  L
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGL 819



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 229/466 (49%), Gaps = 19/466 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           + +  LI     A + D  L     M   G + +V + T L++ F +E + + A+ ++ E
Sbjct: 204 SAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDE 263

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +       D+  YN  I  F K  ++++A K    ++++G  PD VTY  +IG LC    
Sbjct: 264 MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARR 323

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------- 203
           ++ A ++F++L  +   P V  Y  +I      G+ D+A  LL+                
Sbjct: 324 LDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               + +KG V +A +    +  +   P++ +YN+L+  L   G+ E   K+   M   G
Sbjct: 384 ILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAG 442

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L PN++T +I+I  LC+  K ++A  +      K  +PD+ ++  LI    + GR+D A 
Sbjct: 443 LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAY 502

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M+    +P++V Y +++  F K G  +   +I++++   GC P++   N+    +
Sbjct: 503 SLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCV 562

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           + +G+  +   +  E+ ++G+ PD  +Y+ LI  L + G   E   L  +M+       V
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           ++YN +I GFCK+ +++++ ++L  M  KG +P   TY  +++G+ 
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLA 668



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 184/391 (47%), Gaps = 19/391 (4%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L++ F K+++++ A  V++ +R   F P    Y  +IG+L +    +    +F Q+    
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +  V  +T L++    EG+ D A+ LLDEM                  +S     D++ 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEM------------------KSNSFTADLVL 275

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+ +     +GK +   K   EM ++GL P+ VTY+ LI  LC+  + ++AV++     
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
                P  Y+Y+ +I  Y   G+ D A   L+     GC+P ++ YN IL    + G  +
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL I +++      PN+++YN +   L  +G+   AL +   M   G+ P+ +T N +I
Sbjct: 396 EALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMI 454

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+   +DEA  + + ++     P   ++  +I G  +  R++++  +   M +    
Sbjct: 455 DRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQI 514

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           PN   Y  LI+     G + +  ++   +V 
Sbjct: 515 PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVH 545



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 13/320 (4%)

Query: 192 TDKAMKLLDEMG--------MCKKGMVGQAFQFVRSLESRGCQ---PDVISYNMLLRTLL 240
            ++A+ + DEM         M +   V  AFQ+ R +E +  Q   P+V  YN  L  + 
Sbjct: 87  VEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEV--YNAFLMVMA 144

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
                +  E+++ EM   G   +      L++S  +  K ++A  V+   ++    P   
Sbjct: 145 RTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFS 204

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI A     R D  +     M   G   ++  + T++  F + G  D AL + +++
Sbjct: 205 AYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM 264

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
                  ++  YN         G    A     EM ++G+ PD++TY +LI  LC+   +
Sbjct: 265 KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRL 324

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEAV L  +++  R  P V +YN +I+G+    + +E+  +L     KGC P+   Y  +
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384

Query: 481 IEGIGYGGWRAEAMELANAL 500
           +  +G  G   EA+ + + +
Sbjct: 385 LTCLGRKGKVEEALRIHDEM 404


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 242/507 (47%), Gaps = 61/507 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + ++V  G + D +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI--VLRRMTELGCIP 161

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           DVF+YN L+ G C  N+ + A ++L  +   R  G  PDVV+YN ++      G  + A+
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             + ++L     P V+TY+ +I A       DKAM++L+ M                 G 
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G   +A   ++ + S G +P+V++Y+ L+  L   G+  E  K+   M  RGLEP++
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY  L+      G   +   +L      G+ PD + ++ LI AY K  ++D A+     
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P++V Y T++   CK+G+ D A+  FE++ D G  PN+  Y ++   L +   
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 385 KIRALGMISEMLSKGI-----------------------------------EPDEITYNS 409
             +A  +I EML +GI                                   +PD ITYN+
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI   C  G +DEA  LL  M S   +P +++Y  +I G+C+  R+++++ +   M   G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL 496
             PN  TY ++++G+ +    A A EL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 230/450 (51%), Gaps = 19/450 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           F+ G  D++      M+  G  PDVV  + +I    + +  +KA+ V+  + K G  PD 
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN+++ G+C + Q + A   L ++RS G  P+VVTY+ ++  LC  G    A K+FD 
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + +   +P + TY  L+Q    +G   +   LLD M              VR+    G Q
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--------------VRN----GIQ 373

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD   +N+L+       K ++   + ++M   GL PNVV Y  +I  LC+ G  +DA+  
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++GLTP+   Y  LI   C   + D A E +  M+  G   + + +N+I+ + CK
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G   ++ ++F+ +  +G  P++ +YNT+      +G    A  +++ M+S G++PD +T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +LI+  CR   +D+A+ L  +M S+   P +I+YNII+ G   TRR   + E+  ++ 
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + G +   +TY +++ G+       EA+ +
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRM 643



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 16/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C+A +++L    L  +  +GF  D +T+  ++  LC+      A   
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++    C P V +Y  L++    E ++ +A++LL  M   + G              
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG-------------- 195

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV+SYN +L      G  ++      EM+ RG+ P+VVTYS +I++LC+    + 
Sbjct: 196 -GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDK 254

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL    + G+ PD  +Y+ ++  YC  G+   AI  L  M SDG  P++V Y++++ 
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG + +A +IF+ ++  G  P++++Y T+     + G  +    ++  M+  GI+P
Sbjct: 315 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N LI    +   VD+A+ +   M      P V+ Y  +I   CK+  +++++   
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G  PN   Y  LI G+
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGL 456



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 155/284 (54%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P V +Y +L+      G+ + G   +  ++ +G   + +T++ L+  LC D +T DA+D 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E G  PD +SY+ L+   C + R   A+E L  M  D   G  PD+V+YNT+L 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D G  P+V +Y+++ +AL  +    +A+ +++ M+  G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYNS++   C  G   EA+G L  M S    P V++Y+ ++   CK  R  E+ ++ 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G +P+  TY  L++G    G          ALV MHA+
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKG----------ALVEMHAL 363



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP  ++Y 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            LI   C+ GRLDL                AI F                    L  M  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
            GC+PD+ +YN +L   C    + +ALE+   ++D    G PP+V SYNT+ +  +  GD
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML +GI PD +TY+S+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +PN  TY  L+  +   G   EA ++ +++
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 235/483 (48%), Gaps = 38/483 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    +       L     M + G  P++     LI  F    +   A  V+  + 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +  LI G C   +I  A  + D++   GF PDVVTY  +I  LC  G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++   +++ NC+P V  Y  +I +                  +CK   V +AF    
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDS------------------LCKDRQVTEAFNLFS 225

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + ++G  PD+ +YN L+  L N+ +W+    L+ EM+   + P+VV+++ ++ +LC++G
Sbjct: 226 EMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  +A DV+    ++G+ P+  +Y  L+  +C    +D A++  D M+  GC+P++++YN
Sbjct: 286 KVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYN 345

Query: 339 TILAAFCKNG-------------------NADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           T++  +CK                     N D+A+++F+ +   GC PNV SYNT+ +  
Sbjct: 346 TLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGY 405

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                  +A+ +  EM  + + PD +TY++LI  LC    + +A+ L  +M +    P +
Sbjct: 406 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 465

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y I++   CK R + E++ +L A+      P+     + I+G+   G    A +L + 
Sbjct: 466 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 525

Query: 500 LVS 502
           L S
Sbjct: 526 LSS 528



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 231/486 (47%), Gaps = 37/486 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI+     GK  E+L+  + M+  G +PDVV    LI    +   ++ A+R++  ++
Sbjct: 134 FTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 193

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  +P+VFAYN +I   CK  Q+  A  +   + ++G SPD+ TYN +I +LC+    +
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
               + ++++     P V+++  ++ A   EG+  +A  ++D+M                
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK----------------- 244
            G C    + +A +   ++  +GC P+VISYN L+     + +                 
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCY 373

Query: 245 --WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
              +E  K+   M+ +G  PNV++Y+ LI+  C+  + + A+ +      + L PD  +Y
Sbjct: 374 LNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 433

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             LI   C   RL  AI     M++   +P++V Y  +L   CKN    +A+ + + +  
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 493

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P++   N     +  +G+   A  + S + SKG++PD  TY+ +I+ LCR G++DE
Sbjct: 494 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 553

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  L  +M+          YN I  GF +    + +I++L  M  +G   + +T  L ++
Sbjct: 554 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 613

Query: 483 GIGYGG 488
            +   G
Sbjct: 614 MLSDDG 619



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 38/434 (8%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    +N L++   K         +  ++ S G  P++ T +I+I S C    +  AF V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P   T+T LI+   +EG+  +A+ L D+M                 G+CK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + + S+  + CQP+V +YN ++ +L    +  E   L +EM+++G+ P++ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI +LC   + +    +L    +  + PD  S++ ++ A CK+G++  A + +D MI
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P++V Y  ++   C     D+A+++F+ +   GC PNV SYNT+ +  +    +I
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING-YCKIQRI 357

Query: 387 --------------------RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
                                A+ +   M+ KG  P+ I+YN+LI+  C+   +D+A+ L
Sbjct: 358 DKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 417

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             +M      P  ++Y+ +I G C   R+ ++I +   M      PN  TY +L++ +  
Sbjct: 418 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 477

Query: 487 GGWRAEAMELANAL 500
             + AEAM L  A+
Sbjct: 478 NRYLAEAMALLKAI 491



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 178/396 (44%), Gaps = 37/396 (9%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            ++N   S     N I+ A    +R+      P  V +N ++ S+       +   +  Q
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P + T  ILI +                   C    VG AF  +  +   G Q
Sbjct: 87  MDSFGIPPNIYTLHILINS------------------FCHLNRVGFAFSVLAKILKLGHQ 128

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  ++  L+R +   GK  E   L  +MI  G  P+VVTY  LI+ LC+ G T  A+ +
Sbjct: 129 PDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L +  +K   P+ ++Y+ +I + CKD ++  A      M++ G  PDI  YN+++ A C 
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                    +  ++ D    P+V S+NT+  AL   G    A  ++ +M+ +G+EP+ +T
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI----------- 455
           Y +L+   C    +DEAV +   M      P VISYN +I G+CK +RI           
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMD 368

Query: 456 --------NESIEVLAAMFEKGCKPNETTYVLLIEG 483
                   +E+++V   M  KGC PN  +Y  LI G
Sbjct: 369 XXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 135/307 (43%), Gaps = 35/307 (11%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +S+N      L+    +        M+     P+ V ++ L++S+ +       + +   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G+ P+ Y+   LI+++C   R+  A   L  ++  G  PD   + T++   C  G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +AL +F+K+   G  P+V +Y T+ + L   G+   A+ ++  M+ K  +P+   YN+
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 410 LISCLCRDGMVDEAVG-----------------------------------LLVDMESTR 434
           +I  LC+D  V EA                                     LL +M  ++
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V+S+N ++   CK  ++ E+ +V+  M ++G +PN  TY  L++G        EA+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 495 ELANALV 501
           ++ + +V
Sbjct: 327 KVFDTMV 333



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 18/253 (7%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           DE++   ++MV  GC P+V+    LI  + + ++ +KA+ +  E+  +   PD   Y+ L
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G C   +++ A  +   + +    P++VTY I++  LC    +  A  +   +   N 
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
            P +    I I      G+ + A  L   +                 G+C++G++ +A +
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             R ++  GC  +   YN + R  L   +     +L+ EM++RG   +  T ++ +  L 
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616

Query: 276 RDGKTEDAVDVLR 288
            DG  +    +LR
Sbjct: 617 DDGLDQSLKQILR 629


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 230/471 (48%), Gaps = 27/471 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+     +  M+  G  P     + L+    ++     A  ++  ++K+G  P +F YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI+  CK  +++ A  + + +  +G  P+ VTY+I+I S C RG ++ A     ++   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             K TV  Y+ LI      G+   A  L DEM                 G CK+G +  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           F+    +  +G  P+  ++  L+  L +  +  E  KL  EM+   + PN VTY++LI  
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----- 328
            C++G T  A ++L    EKGL PD Y+Y PLIS  C  GR+  A EF++ +  +     
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 329 ---GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GCLP++V Y  ++   CK G  D+A  +  ++      PN ++Y      L S G+ 
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 659

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A+  + ++L +G   + +TYN LI   C+ G + EA  +LV+M  +   P  ISY+ I
Sbjct: 660 EKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 718

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I  +C+   + E+I++  +M  +G  P+   Y  LI G    G   +A EL
Sbjct: 719 IYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 769



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 215/456 (47%), Gaps = 26/456 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALI 113
           + L  +  M+  G  P +   + ++    + R+   A+ +  EI+     PDV+ Y A++
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
              C+      A +V+ R+ S G    V TYN+ I  LC    +  A ++ + L     +
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
             V TY  L+       + +   ++++EM                 G+ KKG +G AF  
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  ++  G  P +  YN L+ ++   GK +E E L   M  +GL PN VTYSILI S C+
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GK + A+  L    E G+    Y Y  LIS +CK G+L  A    D MI++G  P++V 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y ++++ +CK G    A  ++ +++  G  PN  ++  + S L  +     A  +  EM+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              + P+E+TYN LI   C++G    A  LL +M      P   +Y  +I G C T R++
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 457 ESIEVLAAMFE--------KGCKPNETTYVLLIEGI 484
           E+ E +  +          +GC PN  TY  LI G+
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 27/399 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + GK D +L+F+  M   G K  V   + LI    +  K   A  +  E++   
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y +LISG+CK  ++  A ++   +  +G SP+  T+  +I  LC    +  A 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+F +++  N  P  +TY +LI+    EG T +A +LLDEM                 G+
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 205 CKKGMVGQAFQFVRSL--------ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
           C  G V +A +F+  L        E  GC P+V++Y  L+  L  +G  ++ E L  EM+
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           +    PN  TY+  +  L  +G  E A+  L     +G   +  +Y+ LI  +CK GR+ 
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQ 694

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  MI  G  PD ++Y+TI+  +C+ G+  +A++++E + + G  P+  +YN + 
Sbjct: 695 EAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 754

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
                +G+  +A  +  +M+ +G++P+  TYNSLI   C
Sbjct: 755 YGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 207/446 (46%), Gaps = 29/446 (6%)

Query: 33  FDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           F V  + F+   LI    + GK DE+     +M   G  P+ V  + LI  F +  K + 
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+  +  + + G +  V+ Y++LISG CK  ++  A  + D + + G  P+VV Y  +I 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C  G + +AF+++ ++      P   T+T LI       +  +A KL  EM       
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK+G   +AF+ +  +  +G  PD  +Y  L+  L + G+  E  + M
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 253 TEMISR--------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            ++           G  PNVVTY+ LI+ LC+ G  + A  + R        P+  +Y  
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
            +     +G ++ AI+  D ++ +G L + V YN ++  FCK G   +A E+   + D G
Sbjct: 649 FLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+  SY+T+       GD   A+ +   ML++G+ PD + YN LI   C  G + +A 
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767

Query: 425 GLLVDMESTRFRPTVISYNIIILGFC 450
            L  DM     +P   +YN +I G C
Sbjct: 768 ELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 20/404 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
             ++ LI  + + N+ EL   V+ RL    G  P + T + ++  L        A  +FD
Sbjct: 146 LGFDLLIQTYVQ-NRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           +++    +P V  YT ++++                  +C+     +A + +  +ES GC
Sbjct: 205 EIVSSGLRPDVYVYTAVVRS------------------LCELKDFIRAREVIGRMESSGC 246

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
              V +YN+ +R L    +  E  ++   +  +GL  +V TY  L+  LC+  + E   +
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           ++    E G  P   +   L+    K G +  A + ++ +   G  P +  YN ++ + C
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K+G  D+A  +F  +   G  PN  +Y+ +  +    G    AL  + +M   GI+    
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+SLIS  C+ G +  A  L  +M +   +P V+ Y  +I G+CK   ++ +  +   M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
             KG  PN  T+  LI G+ +    AEA +L   +V  + I  +
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 238/467 (50%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   +L  +  M   G +P + +C   I    +  K  KA++ +E ++  G +PD+ 
Sbjct: 247 RAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIV 306

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G+C  N+IE A +++  L S+G  PD V+Y  ++G LC    IE    + +++
Sbjct: 307 TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM 366

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGM 209
           + + N  P  +TY  LI      G  D A+  L E                    C+KG 
Sbjct: 367 VWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR 426

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   V  + SRGC PDV++Y  ++     +G+ +E +K++ +M   G +PN V+Y+ 
Sbjct: 427 MDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTA 486

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC  GK+ +A +++  ++E   TP+A +Y  ++    ++G+L  A +    M+  G
Sbjct: 487 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C+N    +A +  E+  + GC  NV ++ T+       GD   AL
Sbjct: 547 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 606

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M   G  PD +TY +L   L + G +DEA  L+V M S    PT ++Y  +I  +
Sbjct: 607 SVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRY 666

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +  R+++ + +L  M ++  +P  T Y  +IE +   G   EA +L
Sbjct: 667 SQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKL 711



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 196/398 (49%), Gaps = 24/398 (6%)

Query: 91  AVRVMEILEKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           A RV+ ++ + G    P+ F Y  ++  + +A ++  A +VL  ++  G  P +   N  
Sbjct: 219 ARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTT 276

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I  L   G +E A K  +++     KP ++TY  LI+                  G C  
Sbjct: 277 IYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK------------------GYCDL 318

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVT 266
             +  A + +  L S+GC PD +SY  ++  L    K EE + LM +M+ +  L P+ VT
Sbjct: 319 NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVT 378

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI  L + G  +DA+  L+ A++KG   D   Y  ++ ++C+ GR+D A   +  M 
Sbjct: 379 YNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY 438

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC PD+V Y  I+  FC+ G  D+A +I +++   GC PN  SY  + + L  SG  +
Sbjct: 439 SRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSL 498

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  MI+        P+ ITY +++  L R+G + EA  L  +M    F PT +  N++I
Sbjct: 499 EAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLI 558

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              C+ +++ E+ + L     KGC  N   +  +I G 
Sbjct: 559 QSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 596



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 22/460 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--I 97
           +  LIK      + +++L  I  + + GC PD V    ++    +E+K  +   +ME  +
Sbjct: 308 YNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMV 367

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 PD   YN LI    K    + A   L   + +GF  D V Y+ ++ S C +G +
Sbjct: 368 WNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRM 427

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A  +   +    C P V+TYT ++                   G C+ G + +A + +
Sbjct: 428 DEAKSLVIDMYSRGCNPDVVTYTAIVD------------------GFCRLGRIDEAKKIL 469

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +   GC+P+ +SY  LL  L + GK  E  +++         PN +TY  ++  L R+
Sbjct: 470 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRRE 529

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK  +A D+ R   EKG  P     + LI + C++ ++  A ++L+  ++ GC  ++VN+
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 589

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++  FC+ G+ + AL + + +   G  P+  +Y  +F AL   G    A  +I +MLS
Sbjct: 590 TTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 649

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KG++P  +TY S+I    + G VD+ + LL  M   + +P    YN +I   C    + E
Sbjct: 650 KGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM--LKRQPFRTVYNQVIEKLCDFGNLEE 707

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           + ++L  +     K +  T  +L+E     G    A ++A
Sbjct: 708 AEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVA 747



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 194/417 (46%), Gaps = 18/417 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A+RV+ +++K G EP +   N  I    K  ++E A K L+R++  G  PD+VTYN
Sbjct: 250 KLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYN 309

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    IE A ++   L    C P  ++Y  ++     E + ++   L+++M   
Sbjct: 310 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM--- 366

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         + +    PD ++YN L+  L   G  ++    + E   +G   + V
Sbjct: 367 --------------VWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKV 412

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS ++ S C+ G+ ++A  ++     +G  PD  +Y  ++  +C+ GR+D A + L  M
Sbjct: 413 GYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM 472

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   C +G + +A E+     +    PN  +Y  +   L   G  
Sbjct: 473 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKL 532

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +  EM+ KG  P  +  N LI  LC++  V EA   L +  +      V+++  +
Sbjct: 533 SEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTV 592

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I GFC+   +  ++ VL  M+  G  P+  TY  L + +G  G   EA EL   ++S
Sbjct: 593 IHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 649



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 5/298 (1%)

Query: 204 MCKKGMVGQAFQFVRSLESRG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + K  +   A + +R +  RG  C P+   Y M+  +    GK     +++T M   G+E
Sbjct: 210 LSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMV--SYSRAGKLRNALRVLTLMQKAGVE 267

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P++   +  I  L + GK E A+  L   +  G+ PD  +Y+ LI  YC   R++ A+E 
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 327

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALW 380
           +  + S GC PD V+Y T++   CK    ++   + EK+  +    P+  +YNT+   L 
Sbjct: 328 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLS 387

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    AL  + E   KG   D++ Y++++   C+ G +DEA  L++DM S    P V+
Sbjct: 388 KHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVV 447

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +Y  I+ GFC+  RI+E+ ++L  M++ GCKPN  +Y  L+ G+ + G   EA E+ N
Sbjct: 448 TYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 52/429 (12%)

Query: 52  KFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           K +E    +E MV N    PD V    LI    +   ++ A+  + E  +K    D   Y
Sbjct: 355 KIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGY 414

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           +A++  FC+  +++ A  ++  + SRG +PDVVTY  ++   C  G I+ A K+  Q+ +
Sbjct: 415 SAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYK 474

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLD-----------------EMGMCKKGMVGQ 212
             CKP  ++YT L+      G++ +A ++++                   G+ ++G + +
Sbjct: 475 HGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSE 534

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R +  +G  P  +  N+L+++L    K  E +K + E +++G   NVV ++ +I 
Sbjct: 535 ACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIH 594

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G  E A+ VL      G  PDA +Y  L  A  K GRLD A E +  M+S G  P
Sbjct: 595 GFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDP 654

Query: 333 -------------------DIVN--------------YNTILAAFCKNGNADQALEIFEK 359
                              D++N              YN ++   C  GN ++A ++  K
Sbjct: 655 TPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGK 714

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +       + ++ + +  +    G  I A  +   M  + + PD      +   L  DG 
Sbjct: 715 VLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGK 774

Query: 420 VDEAVGLLV 428
           + EA  L++
Sbjct: 775 LVEADNLML 783



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 1/151 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           + G+ DE+   I  M++ G  P  V    +I ++ Q  + +  + ++E + K  +P    
Sbjct: 633 KKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR-QPFRTV 691

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I   C    +E A K+L ++       D  T ++++ S   +G+  SA+KV  ++ 
Sbjct: 692 YNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMF 751

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           R N  P +     + +  +L+G+  +A  L+
Sbjct: 752 RRNLTPDLKLCEKVSKKLVLDGKLVEADNLM 782


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 252/541 (46%), Gaps = 70/541 (12%)

Query: 15  RVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
           R+  + + +  P  H          +  LI    RAG+ D     + ++V  G + D + 
Sbjct: 79  RMARAGAGKVTPTVH---------TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAIT 129

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYGE----PDVFAYNALISGFCKANQIELANKVLD 130
            T L+K    +++++ A+ +  +L +  E    PDVF+YN L+ G C  N+ + A ++L 
Sbjct: 130 FTPLLKGLCADKRTSDAMDI--VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH 187

Query: 131 RL---RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
            +   R  G  PDVV+YN ++      G  + A+  + ++L     P V+TY+ +I A  
Sbjct: 188 MMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC 247

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                DKAM++L+ M                 G C  G   +A   ++ + S G +P+V+
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 307

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y+ L+  L   G+  E  K+   M  RGLEP++ TY  L+      G   +   +L   
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G+ PD + ++ LI AY K  ++D A+     M   G  P++V Y T++   CK+G+ 
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI---------- 400
           D A+  FE++ D G  PN+  Y ++   L +     +A  +I EML +GI          
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 401 -------------------------EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                                    +PD ITYN+LI   C  G +DEA  LL  M S   
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +P +++Y  +I G+C+  R+++++ +   M   G  PN  TY ++++G+ +    A A E
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 496 L 496
           L
Sbjct: 608 L 608



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 230/450 (51%), Gaps = 19/450 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           F+ G  D++      M+  G  PDVV  + +I    + +  +KA+ V+  + K G  PD 
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN+++ G+C + Q + A   L ++RS G  P+VVTY+ ++  LC  G    A K+FD 
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + +   +P + TY  L+Q    +G   +   LLD M              VR+    G Q
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--------------VRN----GIQ 373

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD   +N+L+       K ++   + ++M   GL PNVV Y  +I  LC+ G  +DA+  
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++GLTP+   Y  LI   C   + D A E +  M+  G   + + +N+I+ + CK
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G   ++ ++F+ +  +G  P++ +YNT+      +G    A  +++ M+S G++PD +T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +LI+  CR   +D+A+ L  +M S+   P +I+YNII+ G   TRR   + E+  ++ 
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + G +   +TY +++ G+       EA+ +
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRM 643



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 155/284 (54%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P V +Y +L+      G+ + G   +  ++ +G   + +T++ L+  LC D +T DA+D 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E G  PD +SY+ L+   C + R   A+E L  M  D   G  PD+V+YNT+L 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D G  P+V +Y+++ +AL  +    +A+ +++ M+  G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYNS++   C  G   EA+G L  M S    P V++Y+ ++   CK  R  E+ ++ 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G +P+  TY  L++G    G          ALV MHA+
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKG----------ALVEMHAL 363



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP  ++Y 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            LI   C+ GRLDL                AI F                    L  M  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
            GC+PD+ +YN +L   C    + +ALE+   ++D    G PP+V SYNT+ +  +  GD
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML +GI PD +TY+S+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +PN  TY  L+  +   G   EA ++ +++
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 244/506 (48%), Gaps = 58/506 (11%)

Query: 31  LSFDVKE-TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           LSF V+    + ++++    + +F+E+L     MV +   P ++  TKL+    + +K +
Sbjct: 30  LSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD 89

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
             + + + L+  G   D++  N L++ FC+++Q  LA+  L ++   GF PD+VT+  +I
Sbjct: 90  VVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
              C    +E A  + +Q++    KP V+ YT +I +                  +CK G
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS------------------LCKNG 191

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V  A      +E+ G +PDV+ Y  L+  L N G+W + + L+  M  R ++P+V+T++
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI +  ++GK  DA ++        + P+ ++Y  LI+ +C +G +D A +    M + 
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC PD+V Y +++  FCK    D A++IF ++S  G   N  +Y T+       G    A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF---RPTVISYNII 445
             + S M+S+G+ P+  TYN L+ CLC +G V +A+ +  DM+        P + +YN++
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431

Query: 446 I-----------------------------------LGFCKTRRINESIEVLAAMFEKGC 470
           +                                    G CK  ++  ++ +  ++  KG 
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           KPN  TY  +I G+   G + EA  L
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVL 517



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 191/391 (48%), Gaps = 21/391 (5%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F+     F  LI       + +E++  +  MV  G KPDVVM T +I    +    N 
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ + + +E YG  PDV  Y +L++G C + +   A+ +L  +  R   PDV+T+N +I 
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           +    G    A +++++++R +  P + TYT LI    +EG  D+A ++   M       
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK   V  A +    +  +G   + I+Y  L++    +GK    +++ 
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK---GLTPDAYSYDPLISAY 309
           + M+SRG+ PN+ TY++L+  LC +GK + A+ +    +++   G+ P+ ++Y+ L+   
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C +G+L+ A+   + M        I+ Y  I+   CK G    A+ +F  L   G  PNV
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
            +Y TM S L+  G K  A  +  +M   G+
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 165/343 (48%), Gaps = 18/343 (5%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  +F  ++     P++I +T L+       + D  + L D                   
Sbjct: 56  ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH------------------ 97

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L+  G   D+ + N+L+       +       + +M+  G EP++VT++ LI+  C   +
Sbjct: 98  LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E+A+ ++    E G+ PD   Y  +I + CK+G ++ A+   D M + G  PD+V Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   C +G    A  +   ++     P+V ++N +  A    G  + A  + +EM+   
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I P+  TY SLI+  C +G VDEA  +   ME+    P V++Y  +I GFCK +++++++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++   M +KG   N  TY  LI+G G  G    A E+ + +VS
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 144/305 (47%), Gaps = 36/305 (11%)

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           KG  G+A  F R L+         +Y  +LR  L+  ++ E   L T M+     P+++ 
Sbjct: 15  KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ L++ + +  K +  +++    +  G++ D Y+ + L++ +C+  +  LA  FL  M+
Sbjct: 75  FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  PDIV + +++  FC     ++                                  
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEE---------------------------------- 160

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ M+++M+  GI+PD + Y ++I  LC++G V+ A+ L   ME+   RP V+ Y  ++
Sbjct: 161 -AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G C + R  ++  +L  M ++  KP+  T+  LI+     G   +A EL N ++ M +I
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM-SI 278

Query: 507 SRDTF 511
           + + F
Sbjct: 279 APNIF 283



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GKF ++      M+     P++   T LI  F  E   ++A ++  ++E
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV AY +LI+GFCK  +++ A K+   +  +G + + +TY  +I      G   
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VF  ++     P + TY +L+      G+  KA+ + ++M                
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+C  G + +A      +  R     +I+Y ++++ +   GK +    L   + S+
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           G++PNVVTY+ +IS L R+G   +A  + R  KE G++
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 232/463 (50%), Gaps = 17/463 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           GKF+E+   +E     GC P V+    ++    ++ K  +A+R++E ++    P++ +YN
Sbjct: 356 GKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYN 415

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI   CKA ++E A KV D ++  G  P+++T NIMI  LC    ++ A  +F  L   
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C P  +T+  LI      G+ + A  L ++M                    K G     
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  + +  RGC PD++  N  +  +   G+ E+G  L  E+ ++GL P+V +YSILI  
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L + G ++D   +    KE+GL  D  +Y+ +I  +CK G+++ A + L+ M + G  P 
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y +++    K    D+A  +FE+        NV  Y+++       G    A  ++ 
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E++ KG+ P+  T+N L+  L +   +DEA+    +M++ +  P  ++Y+I++ G CK R
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + N++      M ++G KPN  TY  +I G+   G   EA +L
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDL 818



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 228/499 (45%), Gaps = 23/499 (4%)

Query: 18  VSSSAETRPNTHLL------SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPD 71
           +S++ E  P   LL       ++V    F  LI    R G+ D +L  ++ M +N    D
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNAD 271

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLD 130
           +V+    I  F +  K + A +    L+  G  PD   + ++I   CKA +++ A ++ +
Sbjct: 272 LVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFE 331

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
            L S    P V  YN MI    S G    A+ + ++  R  C P+VI Y  ++     +G
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391

Query: 191 QTDKAMKLLDEMGM----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           + ++A+++L+ M M                CK G +  A +   S++  G  P++I+ N+
Sbjct: 392 KVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNI 451

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++  L    + +E   +   +  +   P+ VT+  LI  L R GK  DA  +     + G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            TP+A  Y  LI  + K GR +   +    M+  GC PD++  N  +    K G  ++  
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +FE++   G  P+V SY+ +   L   G       +  EM  +G+  D   YN +I   
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G V++A  LL +M++   +PTV++Y  +I G  K  R++E+  +      K    N 
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNV 691

Query: 475 TTYVLLIEGIGYGGWRAEA 493
             Y  LI+G G  G   EA
Sbjct: 692 VVYSSLIDGFGKVGRIDEA 710



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 220/476 (46%), Gaps = 26/476 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I R  +A + DE+      +    C PD V    LI    +  K N A  + E +   G
Sbjct: 452 MIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           + P+   Y +LI  F K  + E  +K+   +  RG SPD++  N  +  +   G IE   
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F+++      P V +Y+ILI                   G+ K G     ++    ++
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIH------------------GLVKGGFSKDTYKLFYEMK 613

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G   D  +YN+++      GK  +  +L+ EM ++GL+P VVTY  +I  L +  + +
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  +   AK K +  +   Y  LI  + K GR+D A   L+ ++  G  P+   +N +L
Sbjct: 674 EAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLL 733

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            A  K    D+AL  F+ + ++ CPPN  +Y+ M + L       +A     EM  +G++
Sbjct: 734 DALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLK 793

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ ITY ++IS L R G V EA  L    +S+   P    YN +I G     +  ++  +
Sbjct: 794 PNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYIL 853

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
                 KGC+    T V+L++ +     +A+ +E A A+V   A+ R+  K  + T
Sbjct: 854 FEETRLKGCRIYSKTCVVLLDAL----HKADCLEQA-AIVG--AVLREMAKSQHAT 902



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 179/391 (45%), Gaps = 18/391 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYNAL+    +   +E   ++L+ +   GF P   T   M+ S      +  AF V + +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
            +   +P    YT LI A     + D  + LL +M                    ++G V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +  ++S     D++ YN+ +     +GK +   K   E+ S+GL P+ VT++ +
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  + ++AV++          P  Y+Y+ +I  Y   G+ + A   L+     GC
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P ++ YN IL    + G  ++AL I E +  +   PN++SYN +   L  +G+   AL 
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   G+ P+ IT N +I  LC+   +DEA  + + ++     P  +++  +I G  
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +  ++N++  +   M + G  PN   Y  LI
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 161/363 (44%), Gaps = 48/363 (13%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +AF  + ++     +P   +Y  L+  L    + +    L+ +M   G E  V  ++ LI
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
               R+G+ + A+ +L   K      D   Y+  I  + K G++D+A +F   + S G +
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD V + +++   CK    D+A+E+FE+L      P V +YNTM     S G    A  +
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV-----------------GLLVDM---- 430
           +     KG  P  I YN +++CL R G V+EA+                  +L+DM    
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKA 424

Query: 431 --------------ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
                         E+  F P +I+ NI+I   CK +R++E+  +   +  K C P+  T
Sbjct: 425 GELEAALKVQDSMKEAGLF-PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVT 483

Query: 477 YVLLIEGIGYGGWRAEAMEL----------ANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
           +  LI+G+G  G   +A  L           NA+V    I R+ FK   R      +YKE
Sbjct: 484 FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI-RNFFK-CGRKEDGHKIYKE 541

Query: 527 ISH 529
           + H
Sbjct: 542 MMH 544



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 5/291 (1%)

Query: 213 AFQFVRSLESRGCQ---PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           A  + R +E +  Q   P+  +YN LL  +      E  E+++ EM   G  P+  T   
Sbjct: 115 ALHYFRWVERKTKQLHSPE--AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIE 172

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++S  +  K  +A  V+   ++    P   +Y  LI A       D  +  L  M   G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               +  + T++  F + G  D AL + +++       ++  YN         G    A 
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
               E+ S+G+ PD++T+ S+I  LC+   VDEAV L  +++S +  P V +YN +I+G+
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               + NE+  +L     KGC P+   Y  ++  +G  G   EA+ +  A+
Sbjct: 353 GSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 1/257 (0%)

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K  E   ++  M      P    Y+ LI +L    + +  + +LR  +E G     + + 
Sbjct: 182 KLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFT 241

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI  + ++GR+D A+  LD M S+    D+V YN  +  F K G  D A + F +L   
Sbjct: 242 TLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ 301

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  ++ +M   L  +     A+ +  E+ S    P    YN++I      G  +EA
Sbjct: 302 GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEA 361

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             LL   +     P+VI+YN I+    +  ++ E++ +L AM +    PN T+Y +LI+ 
Sbjct: 362 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDM 420

Query: 484 IGYGGWRAEAMELANAL 500
           +   G    A+++ +++
Sbjct: 421 LCKAGELEAALKVQDSM 437


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 230/482 (47%), Gaps = 23/482 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    RAG  +++L     M     KP V +   ++     E +      +  
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++K G EP+VF YN L+   CK N+++ A+K+L  + S+G  PD V+Y  +I SLC  G
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++ A     + L  +  P+V  Y  LI     E   ++A +LLDEM             
Sbjct: 231 KVKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +   G V  +   +  + +RGC P++ ++  L++     G   E       MI  
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+ PNVV Y+ L+  LC      DAV V    +  G  P+  +Y  LI  Y K G LD A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  ++MI+ GC P++V Y  ++   C+N   +QA  + E +    CPPN  ++NT    
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG    A+ +  +M + G  P+  TYN L+  L +D    EA GL+ DME       
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN II G+C    + E++E+L  M  +G KP+  T  ++I+     G    A++L +
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 499 AL 500
            L
Sbjct: 586 RL 587



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 21/476 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +   +  M + GC PD V  T LI    +  K  +A      L    
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE----LAMSF 242

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P V  YNALI+G CK    E A ++LD + ++G  P+V++Y  +I +L   G +E +  
Sbjct: 243 TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLA 302

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V  ++    C P + T+T LI+   L+G + +A+   D M                 G+C
Sbjct: 303 VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            K  +G A      +E  GC P+V +Y+ L+      G  +   ++   MI+ G  PNVV
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ ++  LCR+     A  ++   + +   P+  +++  I   C  GR+D AI+  D M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            + GC P+   YN +L +  K+    +A  + + +   G   N+ +YNT+      +G  
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             AL ++ +M+ +G +PD IT N +I   C+ G V+ A+ L+  + + ++ P +I+Y  +
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           I G C    + E+I  L  M  +G  PN  T+ +L+  +      + A++  +A++
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVL 658



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 190/377 (50%), Gaps = 28/377 (7%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H          F  LIK  F  G   E+L F + M+  G  P+VV    L+     +
Sbjct: 314 PNLH---------TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 86  RKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           R    AV V   +E  G  P+V  Y+ALI G+ KA  ++ A++V + + + G  P+VV Y
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             M+  LC   M   A+ + + +  +NC P  +T+   I+     G+ D A+K+ D+MG 
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG- 483

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                            + GC P+  +YN LL +LL   ++ E   L+ +M  RG+E N+
Sbjct: 484 -----------------NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ +I   C  G   +A+++L     +G  PDA + + +I AYCK G++++AI+ +D 
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + +    PDI+ Y ++++  C +   ++A+    ++   G  PNV+++N +   L+S+  
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646

Query: 385 KIRALGMISEMLSKGIE 401
              A+  +  +L  G E
Sbjct: 647 HSGAVQFLDAVLGSGFE 663



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 198/425 (46%), Gaps = 47/425 (11%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             Y  +I       +++    +L +++  G S     +  +IGS    G  E A K F +
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +     KPTV  Y  ++ A + E +      +   M                  +CK   
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK------------------------- 244
           V  A + +  + S+GC PD +SY  L+ +L  +GK                         
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 245 -----WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
                +EE  +L+ EM+++G++PNV++Y+ +I++L   G  E ++ VL     +G +P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           +++  LI  +   G    A++F D MI +G +P++V YN ++   C   +   A+ +F +
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   GC PNV +Y+ +      +GD   A  + + M++ G  P+ + Y  ++  LCR+ M
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
            ++A  L+ +M+     P  +++N  I G C + R++ +I+V   M   GC PN TTY  
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 480 LIEGI 484
           L++ +
Sbjct: 497 LLDSL 501



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 22/347 (6%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGM----C-------------KKGMVGQAFQ 215
           K T +TY ++I+    E + D    LL +M +    C             + G   QA +
Sbjct: 73  KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               ++    +P V  YN +L  LL+  +++    + + M   G+EPNV TY+IL+ +LC
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++ + + A  +L     KG  PD  SY  LIS+ CK G++  A E     ++    P + 
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE-----LAMSFTPSVP 247

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK    ++A ++ +++ + G  PNV SY T+ +AL  +G+   +L ++++M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            ++G  P+  T+ SLI      G   EA+     M      P V++YN ++ G C  R +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +++ V   M   GC PN  TY  LI+G    G    A E+ N +++
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 30/275 (10%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+  +   +TY ++I  L  + + +    +L+  K +G++     +  +I +Y + G  +
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    M      P +  YN IL A            I+  +   G  PNV +YN + 
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV---------------- 420
            AL  +     A  ++ EM SKG +PDE++Y +LIS LC+ G V                
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPV 248

Query: 421 --------------DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
                         +EA  LL +M +    P VISY  II        +  S+ VLA MF
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +GC PN  T+  LI+G    G   EA++  + ++
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 220/441 (49%), Gaps = 29/441 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F   I+   + G  D ++  +E M   GC PDVV+ + L+  F ++ + + A+ ++ 
Sbjct: 245 EVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLN 304

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +    +P+   YNA + G C A + +   +++  +  +   P+  T++++   LC  G+
Sbjct: 305 TM--LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGL 362

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A +V +Q+ +  C+P V+ Y  LI     +G+ D A+ LLD M              
Sbjct: 363 VDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML------------- 409

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C PD IS+N  L+ L    +W + E+L+ +M+        +T++ILI SLC+
Sbjct: 410 --------CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQ 461

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G    A++V     +   TPD  +Y  LI+ + + G ++ AIE    M    C PDI +
Sbjct: 462 HGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFS 518

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN +L   C+    + A E+   ++   CPPN  ++N + ++L   G   RA+ +  +M 
Sbjct: 519 YNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMP 578

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  PD  TYN+LI+     G +D+A+ LL  M     +P  ISYN  + G C+  R  
Sbjct: 579 EYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSC---KPDAISYNSTLKGLCRAERWK 635

Query: 457 ESIEVLAAMFEKGCKPNETTY 477
           E+ E++A M  K C PNE T+
Sbjct: 636 EAEEIVAEMLRKKCPPNEVTF 656



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 243/503 (48%), Gaps = 58/503 (11%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           + ++R  +    D +L  + SM ++   P V+ C  LIKK    R+   A RV++ L++ 
Sbjct: 81  QTLRRLVQLEDLDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKES 139

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRG------------------------- 136
           G  D  ++N L++G+C+  ++  A +VL+  +  G                         
Sbjct: 140 GSADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAANVVTYTALINGYCRSGRLADALN 199

Query: 137 ------FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
                  +PD  TYN ++  LC     E A ++ ++++R+NC P  +T+   I++    G
Sbjct: 200 LIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNG 259

Query: 191 QTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
             D A++LL+ M                 G  ++G V  A   + ++    C+P+ + YN
Sbjct: 260 LLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYN 316

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
             L+ L    +W++  +L+ EM+ +   PN  T+S+L S LC+ G  + A++V+   ++ 
Sbjct: 317 AALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKY 376

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD   Y+ LI+ + + GR+D A+  LD M+   C PD +++N  L A C+       
Sbjct: 377 GCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDV 433

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            E+  ++    CP    ++N +  +L   G    A+ +  +M      PD +TY+SLI+ 
Sbjct: 434 EELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLING 493

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
               G+V+ A+ L   M     +P + SYN ++ G C+  R  ++ E++A M  K C PN
Sbjct: 494 FSEQGLVESAIELFQSMPC---KPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPN 550

Query: 474 ETTYVLLIEGIGYGGWRAEAMEL 496
           E T+ +LI  +   G+   A+E+
Sbjct: 551 EITFNILINSLCQKGFADRAIEV 573



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 41/266 (15%)

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           LR L+ +   +   +L+  M S    P V+  +ILI  LC   +  DA  VL A KE G 
Sbjct: 83  LRRLVQLEDLDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESGS 141

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                                                D V++NT++A +C++G    A  
Sbjct: 142 A------------------------------------DAVSHNTLVAGYCRDGRLADAER 165

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + E  + V    NV +Y  + +    SG    AL +I+ M    + PD  TYN+++  LC
Sbjct: 166 VLEA-AKVSGAANVVTYTALINGYCRSGRLADALNLIASM---PVAPDTYTYNTVLKGLC 221

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
                ++A  L+ +M      P  +++   I  FC+   ++ ++++L  M   GC P+  
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVV 281

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
            Y  L+ G    G   +A+ L N ++
Sbjct: 282 IYSTLVNGFSEQGRVDDALVLLNTML 307


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 230/482 (47%), Gaps = 23/482 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    RAG  +++L     M     KP V +   ++     E +      +  
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++K G EP+VF YN L+   CK N+++ A+K+L  + S+G  PD V+Y  +I SLC  G
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++ A +     L  +  P+V  Y  LI     E   ++A +LLDEM             
Sbjct: 231 KVKEARE-----LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +   G V  +   +  + +RGC P++ ++  L++     G   E       MI  
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+ PNVV Y+ L+  LC      DAV V    +  G  P+  +Y  LI  Y K G LD A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  ++MI+ GC P++V Y  ++   C+N   +QA  + E +    CPPN  ++NT    
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG    A+ +  +M + G  P+  TYN L+  L +D    EA GL+ DME       
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN II G+C    + E++E+L  M  +G KP+  T  ++I+     G    A++L +
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 499 AL 500
            L
Sbjct: 586 RL 587



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 227/474 (47%), Gaps = 21/474 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +   +  M + GC PD V  T LI    +  K  +A      L    
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE----LAMSF 242

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P V  YNALI+G CK    E A ++LD + ++G  P+V++Y  +I +L   G +E +  
Sbjct: 243 TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLA 302

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V  ++    C P + T+T LI+   L+G + +A+   D M                 G+C
Sbjct: 303 VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            K  +G A      +E  GC P+V +Y+ L+      G  +   ++   MI+ G  PNVV
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ ++  LCR+     A  ++   + +   P+  +++  I   C  GR+D AI+  D M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            + GC P+   YN +L +  K+    +A  + + +   G   N+ +YNT+      +G  
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             AL ++ +M+ +G +PD IT N +I   C+ G V+ A+ L+  + + ++ P +I+Y  +
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           I G C    + E+I  L  M  +G  PN  T+ +L+  +      + A++  +A
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 183/358 (51%), Gaps = 28/358 (7%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H          F  LIK  F  G   E+L F + M+  G  P+VV    L+     +
Sbjct: 314 PNLH---------TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 86  RKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           R    AV V   +E  G  P+V  Y+ALI G+ KA  ++ A++V + + + G  P+VV Y
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             M+  LC   M   A+ + + +  +NC P  +T+   I+     G+ D A+K+ D+MG 
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG- 483

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                            + GC P+  +YN LL +LL   ++ E   L+ +M  RG+E N+
Sbjct: 484 -----------------NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ +I   C  G   +A+++L     +G  PDA + + +I AYCK G++++AI+ +D 
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + +    PDI+ Y ++++  C +   ++A+    ++   G  PNV+++N +   L+S+
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 193/402 (48%), Gaps = 18/402 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +SF      +  LI    +   F+E+   ++ M+  G  P+V+  T +I           
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           ++ V+  +   G  P++  + +LI GF        A    DR+   G  P+VV YN ++ 
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            LCS+  +  A  VF+Q+  + C P V TY+ LI      G  D A ++ + M       
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +C+  M  QA+  + +++   C P+ +++N  ++ L   G+ +   K+ 
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVF 479

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M + G  PN  TY+ L+ SL +D +  +A  +++  + +G+  +  +Y+ +I  YC  
Sbjct: 480 DQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCA 539

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G L  A+E L  M+  G  PD +  N ++ A+CK G  + A+++ ++LS     P++ +Y
Sbjct: 540 GMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAY 599

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            ++ S + +      A+  +  MLS+GI P+  T+N L+  L
Sbjct: 600 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 171/351 (48%), Gaps = 30/351 (8%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGM----C-------------KKGMVGQAFQ 215
           K T +TY ++I+    E + D    LL +M +    C             + G   QA +
Sbjct: 73  KHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               ++    +P V  YN +L  LL+  +++    + + M   G+EPNV TY+IL+ +LC
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL----DLAIEFLDYMISDGCL 331
           ++ + + A  +L     KG  PD  SY  LIS+ CK G++    +LA+ F          
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT--------- 243

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P +  YN ++   CK    ++A ++ +++ + G  PNV SY T+ +AL  +G+   +L +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +++M ++G  P+  T+ SLI      G   EA+     M      P V++YN ++ G C 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            R + +++ V   M   GC PN  TY  LI+G    G    A E+ N +++
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 30/275 (10%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+  +   +TY ++I  L  + + +    +L+  K +G++     +  +I +Y + G  +
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    M      P +  YN IL A            I+  +   G  PNV +YN + 
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV---------------- 420
            AL  +     A  ++ EM SKG +PDE++Y +LIS LC+ G V                
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPV 248

Query: 421 --------------DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
                         +EA  LL +M +    P VISY  II        +  S+ VLA MF
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +GC PN  T+  LI+G    G   EA++  + ++
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 219/449 (48%), Gaps = 19/449 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI      G+ DE +   + M  + C P V   T ++   F+  +  +A+ +  
Sbjct: 39  EVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFS 98

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ E+  EP++  Y  +I+  CK  ++E   ++LD +  +G  P V TYN +I   C  G
Sbjct: 99  EMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEG 158

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           M+E+A ++ D +  ++C P   TY  LI     +    +AM LL +M             
Sbjct: 159 MVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM------------- 205

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               LESR   P V++YN L+     +G  +   +L+  M   G+ P+  TYS+ I +LC
Sbjct: 206 ----LESR-LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G+ E+A  +  + KEKG+  +   Y  LI  YCK G++D A   LD M+++ CLP+  
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK     +AL + E +   G    V +Y  +  A+   GD   A  ++ +M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +PD   Y + I   C  G + EA  ++  M      P  ++Y ++I  +     +
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           N + +VL  MF+ GC P+  TY  LI+ +
Sbjct: 441 NPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 235/504 (46%), Gaps = 47/504 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  + +   ++ M +N C P+     +LI  F +++  ++A+ ++ ++L
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P V  YN+LI G CK   ++ A ++L+ +   G  PD  TY++ I +LC +G IE
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIE 266

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+ L     K   + YT LI      G+ D A  LLD M                
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI 326

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  V +A   + S+  +G +  V +Y +L+  +L  G ++   +++ +M+S G +
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V  Y+  I + C  G  ++A D++    E+G+ PDA +Y  +I AY   G L+ A + 
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446

Query: 322 LDYMISDGCLPDIVNYNTIL--------------AAFC---------------KNGNADQ 352
           L  M   GC P    Y+ ++               A C               K    + 
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           ALE+FEK+ + GC PN+++Y  +   L   G    A  +   M  +G+ P E  YNSL++
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           C C  G+  +AV L+  M      P + S N++  G  +     ++  V + + + G   
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
           +E  + +LI+G+   G      EL
Sbjct: 627 DEVAWKILIDGLLKNGLSDGCSEL 650



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 229/509 (44%), Gaps = 47/509 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  ++   F +G+  E++     M   GC+P++   T +I    +E K  +  R++ E++
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK   P V  YNALI G+CK   +E A ++LD + S   +P+  TYN +I   C +  + 
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A  +  ++L     P+V+TY  LI      G  D A +LL+ M                
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CKKG + +A     SL+ +G + + + Y  L+      GK ++   L+  M++    
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  TY+ LI  LC++ K ++A+ ++ +  +KGL     +Y  LI A  K+G  D A   
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M+S G  PD+  Y   + AFC  GN  +A ++   + + G  P+  +Y  +  A   
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV--------------------- 420
            G    A  ++  M   G +P   TY+ LI  L ++ +                      
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA 496

Query: 421 --------DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
                   + A+ L   M      P + +Y  +I+G CK  R+  + ++   M E+G  P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           +E  Y  L+      G   +A+ L  A++
Sbjct: 557 SEAIYNSLLNCCCELGIYGDAVRLVGAMM 585



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 20/418 (4%)

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           N A  V  ++ K G   +  +Y  LI G C+  +++    +  ++R     P V TY ++
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVI 80

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           + +L   G    A  +F ++    C+P + TYT++I A   E + ++  ++LDEM     
Sbjct: 81  VHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL 140

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G CK+GMV  A + +  + S  C P+  +YN L+              
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+++M+   L P+VVTY+ LI   C+ G  + A  +L    E G+ PD ++Y   I   C
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K GR++ A    + +   G   + V Y  ++  +CK G  D A  + +++    C PN S
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YN +   L        AL ++  M+ KG++    TY  LI  + ++G  D A  +L  M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            S+ ++P V  Y   I  FC    I E+ ++++ MFE+G  P+  TY L+I+   YGG
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID--AYGG 436



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 177/346 (51%), Gaps = 18/346 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           + SAF VF+ + +  C+   ++YT LI                   G+C+ G V +    
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIH------------------GLCEVGRVDEGINI 61

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +    C P V +Y +++  L   G+  E   L +EM  RG EPN+ TY+++I+++C+
Sbjct: 62  FKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCK 121

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K E+   +L    EKGL P   +Y+ LI  YCK+G ++ A E LD M S+ C P+   
Sbjct: 122 ETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERT 181

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  FC+  N  +A+ +  K+ +    P+V +YN++       G    A  +++ M 
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ PD+ TY+  I  LC+ G ++EA  L   ++    +   + Y  +I G+CK  +++
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMD 301

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  +L  M  + C PN +TY  LI+G+       EA+ L  +++ 
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQ 347



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 204/457 (44%), Gaps = 47/457 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G  D +   +  M  NG  PD    +  I    ++ +  +A  +   L+
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + +   Y ALI G+CKA +++ AN +LDR+ +    P+  TYN +I  LC    ++
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQ 336

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + + +++   K TV TYTILI A + EG  D A ++LD+M                
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFI 396

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C +G + +A   +  +  RG  PD ++Y +++     +G       ++  M   G +
Sbjct: 397 HAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCD 456

Query: 262 PNVVTYSILISSLCRDGKTE-----------------DAVDVLRAAK------------E 292
           P+  TYS LI  L ++  T+                 D  DV +  K            E
Sbjct: 457 PSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLE 516

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G +P+  +Y  LI   CK GRL +A +  D+M   G  P    YN++L   C+ G    
Sbjct: 517 HGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGD 576

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ +   + + G  P + S N +F  L+  G K +A  + S +L  G   DE+ +  LI 
Sbjct: 577 AVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILID 636

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            L ++G+ D    LL  ME+   +    +Y ++I G 
Sbjct: 637 GLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 19/446 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  +I     AG+ DE +   + M  + C P V   T +I   F   ++ + + +  
Sbjct: 284 EVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFN 343

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ E+  EP+V  Y  ++   CK  +++ + ++L+ +  +G  P VVTYN +I   C  G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            IE+A ++   +  +NC+P   TY  LI          KAM LL +M             
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM------------- 450

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               LES+   P +++YN L+      G ++   KL+  +   GL P+  TYS+ I +LC
Sbjct: 451 ----LESK-LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC 505

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  + E+A D+  + KEKG+  +   Y  LI  +CK G++D AI  L+ M S+ CLP+  
Sbjct: 506 KSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSS 565

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN+++   CK G   + L + E +S +G  P V++Y  +   +   GD   A  + ++M
Sbjct: 566 TYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM 625

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +PD  TY + I   C  G V EA G++  M      P  ++Y ++I  + +    
Sbjct: 626 VSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLA 685

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLI 481
            ++  VL  M + GC P+   +  LI
Sbjct: 686 YDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 207/409 (50%), Gaps = 18/409 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           V +I +    PD F Y +LI G+C+ N +  A KV + + ++G   + V+Y  +I  LC 
Sbjct: 237 VSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCE 296

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G I+    +F ++  D+C PTV TYT++I A     +  + M L +EM           
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM----------- 345

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                    R C+P+V +Y +++  +    K +E  +++ EM+ +GL P+VVTY+ LI  
Sbjct: 346 -------RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C +G+ E A+++L   +     P+  +Y+ LI  + K   +  A+  L  M+     P 
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V YN+++   CK G+ D A ++ + L + G  P+  +Y+     L  S     A  + +
Sbjct: 459 LVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            +  KGI+ +E+ Y +LI   C+ G +DEA+ LL  M S    P   +YN +I G CK  
Sbjct: 519 SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++ E + ++  M + G KP   TY +LIE +   G    A  + N +VS
Sbjct: 579 KVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVS 627



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 200/408 (49%), Gaps = 18/408 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+L     P+++  N +++ + K   I  AN  + ++   G SPD  TY  +I   C   
Sbjct: 204 EMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            + SA+KVF+ +    C+   ++YT +I                   G+C+ G + +   
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIH------------------GLCEAGRIDEGIS 305

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             + +    C P V +Y +++  L    +  EG  L  EM  R  EPNV TY++++ ++C
Sbjct: 306 LFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMC 365

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++ K +++  +L    EKGL P   +Y+ LI  YC++GR++ A+E L  M S+ C P+  
Sbjct: 366 KERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNER 425

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++  F K  +  +A+ +  K+ +    P++ +YN++      +G    A  ++  +
Sbjct: 426 TYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLL 485

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              G+ PD+ TY+  I  LC+   ++EA  L   ++    +   + Y  +I G CK  +I
Sbjct: 486 KENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKI 545

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +E+I +L  M  + C PN +TY  LI G+   G   E + +   +  M
Sbjct: 546 DEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 234/501 (46%), Gaps = 65/501 (12%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G  PDVV  T L+     E + ++A+ +  ++ E    P+V  +  L++G C+  +I  A
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR-DNCKPTVITYTILIQ 184
             +LDR+   G  P  +TY  ++  +C +G   SA  +  ++    +  P V+ Y+ +I 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 185 ATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
           +   +G+   A  L  EM                 G C  G    A Q ++ +  R   P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR----------- 276
           DV++YN L+   +  GK+ E E+L  EM+ RG+ PN +TYS +I   C+           
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 277 -------------------DG-----KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
                              DG     + +D +++L    E GL  D  +Y+ LI  +   
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV--------- 363
           G L+ A++ L  MIS G  PDIV  +T+L   C NG    ALE+F+ +            
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 364 --GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  P+V +YN + S L + G  + A  +  EM  +GI PD ITY+S+I  LC+   +D
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  +   M S  F P V+++  +I G+CK  R+++ +E+   M  +G   N  TY+ LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623

Query: 482 EGIGYGGWRAEAMELANALVS 502
            G    G    A+++   ++S
Sbjct: 624 CGFRKVGNINGALDIFQEMIS 644



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 237/498 (47%), Gaps = 65/498 (13%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKV 128
           P VV   KL+    +  + +  + + + +E K    D++++N LI  FC  +++  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++   G  PDVVT+  ++  LC    +  A  +F Q+    C+P V+T+T L+     
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES--------- 222
           EG+  +A+ LLD M                 GMCKKG    A   +R +E          
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 223 ---------------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                                      +G  PD+ +YN ++    + G+W + E+L+ EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + R + P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y  +I  +CK  RL
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A      M + GC P+++ +NT++  +C     D  +E+  ++++ G   + ++YNT+
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR- 434
               +  GD   AL ++ EM+S G+ PD +T ++L+  LC +G + +A+ +   M+ ++ 
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 435 ----------FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                       P V +YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 485 GYGGWRAEAMELANALVS 502
                  EA ++ +++ S
Sbjct: 557 CKQSRLDEATQMFDSMGS 574



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +   + ++G SP+++T+N +I   C    I+   ++  ++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ LL EM                 G+C  G + 
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELKRAVAMLEKL 677



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TY+ MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P +IT+  LI       + D  M+LL EM                 G    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A   ++ + S G  PD+++ + LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V TY+ILIS L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  D M S    P++V + T++  +CK G  D  LE+F ++   G   N  +Y T+    
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++ L     +  AV +L  ++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 177/399 (44%), Gaps = 53/399 (13%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +E A  +F  +LR    P+V+ +  L+   +   + D  + L  +M              
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 203 --------------------------------------GMCKKGMVGQAFQFVRSLESRG 224
                                                 G+C +  V +A      +    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+P+V+++  L+  L   G+  E   L+  M+  GL+P  +TY  ++  +C+ G T  A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 285 DVLRAAKE-KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           ++LR  +E   + P+   Y  +I + CKDGR   A      M   G  PD+  YN+++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC +G    A ++ +++ +    P+V +YN + +A    G    A  +  EML +GI P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY+S+I   C+   +D A  +   M +    P +I++N +I G+C  +RI++ +E+L 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M E G   + TTY  LI G    G    A++L   ++S
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 14/317 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V+ +  L+  ++ M + +    L  +M  + +  ++ +++ILI   C   K   A+  
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                + GL PD  ++  L+   C + R+  A+     M    C P++V + T++   C+
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS-KGIEPDEI 405
            G   +A+ + +++ + G  P   +Y T+   +   GD + AL ++ +M     I P+ +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+++I  LC+DG   +A  L  +M+     P + +YN +I+GFC + R +++ ++L  M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR--------DTFKRLNRT 517
            E+   P+  TY  LI      G   EA EL + ++    I          D F + NR 
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR- 375

Query: 518 FPLLDVYKEISHL-ATK 533
              LD  + + +L ATK
Sbjct: 376 ---LDAAEHMFYLMATK 389



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI   +  G  + +L  ++ M+++G  PD+V C  L+       K   A+ + ++
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++ + +  RG  PD +TY+
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG-- 608

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G+V  A                I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 609 RRGIVANA----------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 653 TIRNMLTGLWSKEELKRAVAML 674


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 227/452 (50%), Gaps = 26/452 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL---EKYG--- 102
           RA +F      +  M     +P+VV    LI    + R+ ++A+ V E +   E  G   
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESAF 161
           EPDV  YN LI G CK  + E    +++R+RS+    P+ VTYN +I   C   MIE+A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++FDQ+ +D   P V+T   L+                   GMCK G +  A +F   ++
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVD------------------GMCKHGRINGAVEFFNEMQ 478

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G + + ++Y  L+R   N+   E+  +L  EM+  G  P+ + Y  LIS L + GK +
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  VL   KE G +PD  S++ LI+ +C+  +LD A E L  M + G  PD V YNT++
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-I 400
           + F K G+   A  + +K+   G  P V +Y  +  A   +G+   A+ +  +M S   +
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+ + YN LI+ LCR   VD A+ L+ DM+    +P   ++N +  G  +   ++++ E
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           ++  M E  C P+  T  +L E +   G  A+
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGETAK 750



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 237/476 (49%), Gaps = 27/476 (5%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEK 100
           +LI R  R+G+ D +   +  ++  G   +   C  L+    + R+  +   ++ E+ E 
Sbjct: 275 QLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEM 334

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRL---RSRGF--SPDVVTYNIMIGSLCSRG 155
             +P+V  +  LI+  CK  +++ A +V +++    S GF   PDV+TYN +I  LC  G
Sbjct: 335 DIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVG 394

Query: 156 MIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             E    + +++  +  C P  +TY  LI                   G CK  M+  A 
Sbjct: 395 RQEEGLGLVERMRSQPRCMPNTVTYNCLID------------------GYCKASMIEAAR 436

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    +   G  P+V++ N L+  +   G+     +   EM  +GL+ N VTY+ LI + 
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C     E A+++     E G +PDA  Y  LIS   + G+LD A   L  M   G  PDI
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V++N ++  FC+    D+A E+ +++ + G  P+  +YNT+ S    +GD   A  ++ +
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTR 453
           M+ +G+ P  +TY +LI   C +G +DEA+ +  DM ST +  P  + YNI+I   C+  
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN 676

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +++ ++ ++  M  KG KPN  T+  + +G+    W ++A EL + +   HA + D
Sbjct: 677 QVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE-HACNPD 731



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 236/478 (49%), Gaps = 23/478 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAV---RVMEI 97
           LI   FR G+ D++L+ ++ M+    +  P+      +     +  K  +AV    ++ +
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 98  LEKYGEPDVFA----YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + K+ E +VF        LIS  C++ + + A  VL  L   G   +  + N ++ +L  
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
               +    +  ++   + +P V+T+ ILI       + D+A+++ ++M        G++
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG------GES 371

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILIS 272
             F+        +PDVI+YN L+  L  +G+ EEG  L+  M S+    PN VTY+ LI 
Sbjct: 372 NGFL-------VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLID 424

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+    E A ++     + G+ P+  + + L+   CK GR++ A+EF + M   G   
Sbjct: 425 GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKG 484

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           + V Y  ++ AFC   N ++A+E+F+++ + GC P+   Y T+ S L  +G   RA  ++
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           S+M   G  PD +++N LI+  CR   +DEA  +L +ME+   +P  ++YN +I  F KT
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
              + +  ++  M ++G  P   TY  LI      G   EAM++   + S   +  +T
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNT 662



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 203/482 (42%), Gaps = 110/482 (22%)

Query: 126 NKVLDRLR---SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY--T 180
           NK+LD  +   S      V    ++I       M++ +F V+++L    C    +T+   
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRN 196

Query: 181 ILIQATMLEGQTDKAMKLLDEM-------------------GMCKKGMVGQAFQ------ 215
           ILI     +G+ D A+ LLDEM                    + K+  VG+A        
Sbjct: 197 ILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVG 256

Query: 216 ---------------FVRSLESRGCQP-------DVI-------------SYNMLLRTLL 240
                          ++  L SR C+        DV+             S N LL  L 
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR------------ 288
              +++    L+ EM    ++PNVVT+ ILI+ LC+  + ++A++V              
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 289 -----------------AAKEKGL------------TPDAYSYDPLISAYCKDGRLDLAI 319
                              +E+GL             P+  +Y+ LI  YCK   ++ A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E  D M  DG  P++V  NT++   CK+G  + A+E F ++   G   N  +Y  +  A 
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            +  +  +A+ +  EML  G  PD I Y +LIS L + G +D A  +L  M+   F P +
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           +S+N++I GFC+  +++E+ E+L  M   G KP+  TY  LI      G  + A  L   
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 500 LV 501
           +V
Sbjct: 617 MV 618



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 19/260 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+        ++++   + M+  GC PD ++   LI    Q  K ++A  V+  ++
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PD+ ++N LI+GFC+ N+++ A ++L  + + G  PD VTYN +I      G   
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A ++  +++++   PTV+TY  LI A  L G  D+AMK+  +M                
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +C+K  V  A   +  ++ +G +P+  ++N + + L       +  +LM  M     
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHAC 728

Query: 261 EPNVVTYSILISSLCRDGKT 280
            P+ +T  IL   L   G+T
Sbjct: 729 NPDYITMEILTEWLSAVGET 748



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G F  +   ++ MV  G  P VV    LI  +      ++A+++   +    
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           +  P+   YN LI+  C+ NQ++LA  ++D ++ +G  P+  T+N M   L  +  +  A
Sbjct: 657 KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKA 716

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           F++ D++    C P  IT  IL +     G+T K
Sbjct: 717 FELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 249/492 (50%), Gaps = 25/492 (5%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N  L+++ V     MKL        KF+E+   ++  +  G  P+ V+   LI  + +  
Sbjct: 313 NATLITYSVLINGLMKL-------EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 365

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
               A+R+  +++ K   P+    N++I GFCK  Q+E A  +L+ + SRGFS +   + 
Sbjct: 366 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 425

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            +I  LC     ESA +   ++L  N +P     T L+     EG+   A++L   +   
Sbjct: 426 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G + +A + ++ +  RG   D I+YN L+      GK EEG
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            KL  EM+ +G+EP+  TY++LI  +CR GK ++AV++    K + L P+ Y+Y  +I  
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           YCK  +++   +    +++     + V YNT++ A+C+NGN  +A ++ + +   G PP 
Sbjct: 606 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 665

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
            ++Y+++   + + G    A  +I EM  +G+ P+ + Y +LI   C+ G +D+ V +L 
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M S    P  I+Y ++I G+ K+  +  + ++L  M  KG  P+  TY +L  G    G
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785

Query: 489 WRAEAMELANAL 500
              E  ++ + +
Sbjct: 786 KIEEGFKICDYM 797



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 232/473 (49%), Gaps = 17/473 (3%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
            FR   F  ++     +   G  P V  CT L+    +  +  K+  V E + +   PDV
Sbjct: 187 QFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDV 246

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + ++  I+ FCK  ++E A ++   +   G SP+VVTYN +I  LC  G ++ AF+  ++
Sbjct: 247 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 306

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +++D    T+ITY++LI   M   + ++A  +L E                  G CK G 
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +G A +    + S+G  P+ ++ N +++    +G+ E+ E ++ EM+SRG   N   ++ 
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC + + E A+  LR    + + P+      L+   CK+G+   A+E    ++  G
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              ++V  N ++   CK GN  +A+ + +K+ + G   +  +YNT+ S     G      
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM+ +GIEPD  TYN LI  +CR G +DEAV L  + +S    P V +Y ++I G+
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           CK  +I E  ++   +  +  + N   Y  LI      G   EA +L + + S
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 235/481 (48%), Gaps = 18/481 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  DE+  F E MV +G    ++  + LI    +  K N+A  V+ E L
Sbjct: 284 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 343

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK   P+   YN LI G+CK   +  A ++   + S+G +P+ VT N +I   C  G +E
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + +++L          +T +I    +  + + A++ L EM                
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+G    A +    L  +G   ++++ N L+  L   G  +E  +L+ +M+ RG  
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + +TY+ LIS  C++GK E+   +     ++G+ PD ++Y+ LI   C+ G+LD A+  
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            +   S   +P++  Y  ++  +CK    ++  ++F +L       N   YNT+  A   
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G+ + A  +  +M SKGI P   TY+SLI  +C  G +++A  L+ +M      P V+ 
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y  +I G+CK  ++++ + VL  M      PN+ TY ++I+G    G    A +L + +V
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 502 S 502
            
Sbjct: 764 G 764



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 207/419 (49%), Gaps = 19/419 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    F  +I       +F+ +L F+  M+    +P+  + T L+    +E K + A
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 475

Query: 92  VRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           V +   +LEK    ++   NALI G CK   ++ A ++L ++  RGF  D +TYN +I  
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C  G +E  FK+  ++++   +P   TY +LI                   GMC+ G +
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIH------------------GMCRIGKL 577

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A       +SR   P+V +Y +++       K EEGEKL TE++++ LE N V Y+ L
Sbjct: 578 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 637

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + CR+G T +A  +    + KG+ P   +Y  LI   C  GR++ A   +D M  +G 
Sbjct: 638 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP++V Y  ++  +CK G  D+ + + +++S     PN  +Y  M      SGD   A  
Sbjct: 698 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           ++ EM+ KGI PD +TYN L +  C++G ++E   +   M         I+Y  ++ G+
Sbjct: 758 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 216/466 (46%), Gaps = 34/466 (7%)

Query: 59  FIESMVANG-CKPDVVMCTKLIKK----FFQERKSNKAVRV---MEILEKYGEPDVF--A 108
            + S++ +G   P  ++  +LI +     F + K N+ + +   M  L + GE  V   A
Sbjct: 118 LMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPK-NRHIEIASAMADLNEVGESGVAVAA 176

Query: 109 YNALISGFC-KANQIELANK--VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            + LI  +C +   +   N   V   L ++G  P V T   ++ SL     +E ++ VF+
Sbjct: 177 VDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 236

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            + R    P V  ++  I A                   CK G V  A Q    +E  G 
Sbjct: 237 TM-RQGVSPDVYLFSTAINA------------------FCKGGKVEDAIQLFFDMEKLGV 277

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P+V++YN L+  L   G  +E  +   +M+  G+   ++TYS+LI+ L +  K  +A  
Sbjct: 278 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 337

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL+   EKG TP+   Y+ LI  YCK G L  A+     M+S G  P+ V  N+I+  FC
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  +QA  I E++   G   N  ++ T+   L  +     AL  + EML + + P++ 
Sbjct: 398 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 457

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
              +L+  LC++G   +AV L   +    F   +++ N +I G CKT  + E++ +L  M
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 517

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            E+G   ++ TY  LI G    G   E  +L   +V    I  DTF
Sbjct: 518 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-QGIEPDTF 562


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 221/419 (52%), Gaps = 19/419 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAY 109
           G+  +SL+F + +VA G + D V    L+    +  ++  A++++ ++E +   P+V  Y
Sbjct: 94  GEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMY 153

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I G CK   +  A  +   + +RG  P+V+TY+ +I   C  G +  AF + ++++ 
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL 213

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            N  P V TYTIL+ A                  +CK+G V +A   +  +   G +P+V
Sbjct: 214 KNINPNVYTYTILMDA------------------LCKEGKVKEAKNLLAVMTKEGVKPNV 255

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SYN L+     +G+ +  +++   M+ +G+ PNV +Y+I+I  LC+  + ++A+++LR 
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K + P+  +Y  LI  +CK GR+  A++ L  M   G   D+V Y ++L A CKN N
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQN 375

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  +F K+ + G  PN  +Y  +   L   G    A  +   +L KG   +  TYN 
Sbjct: 376 LDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNV 435

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +IS LC++GM+DEA+ +   ME     P  +++ III    +  + +++ ++L  M  K
Sbjct: 436 MISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 209/415 (50%), Gaps = 17/415 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N ++    K      A  +  +++ +G  PD+ T NI+I   C  G +  +F V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P  IT   L++   L+G+  K++   D++                 G+CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + +R +E R  +P+V+ YN ++  L       E   L +EM +RG+ PNV+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS LI   C  G+  +A  +L     K + P+ Y+Y  L+ A CK+G++  A   L  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            +G  P++V+YNT++  +C  G    A ++F  +   G  PNV SYN M   L  S    
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ E+L K + P+ +TY+SLI   C+ G +  A+ LL +M        V++Y  ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              CK + ++++  +   M E+G +PN+ TY  LI+G+  GG    A +L   L+
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 229/449 (51%), Gaps = 18/449 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P ++   K++    + +    A+ + + ++  G EPD+F  N LI+ FC   Q+  +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L ++   G+ P+ +T N ++  LC +G ++ +    D+++    +   ++Y  L+     
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G+T  A+KLL  +                 G+CK  +V +A+     +++RG  P+VI+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ L+      G+  E   L+ EMI + + PNV TY+IL+ +LC++GK ++A ++L    
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G+ P+  SY+ L+  YC  G +  A +    M+  G  P++ +YN ++   CK+   D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ +  ++      PN  +Y+++       G    AL ++ EM  +G   D +TY SL+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC++  +D+A  L + M+    +P   +Y  +I G CK  R   + ++   +  KGC+
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANAL 500
            N  TY ++I G+   G   EA+ + + +
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKM 456



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 164/325 (50%), Gaps = 8/325 (2%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    + ++ +G +PD+ + N+L+    ++G+      ++ +++  G +PN +T + L+ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC  G+ + ++        +G   D  SY  L++  CK G    A++ L  +      P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V YNTI+   CK+   ++A +++ ++   G  PNV +Y+T+      +G  + A G++
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           +EM+ K I P+  TY  L+  LC++G V EA  LL  M     +P V+SYN ++ G+C  
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR---- 508
             +  + ++   M +KG  PN  +Y ++I+ +       EAM L   ++  + +      
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 509 ----DTFKRLNRTFPLLDVYKEISH 529
               D F +L R    LD+ KE+ H
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYH 353



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+  E+   +  M+     P+V   T L+    +E K  +A  ++ ++ K G +P+V +
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVS 257

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L+ G+C   +++ A ++   +  +G +P+V +YNIMI  LC    ++ A  +  ++L
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
             N  P  +TY+ LI      G+   A+ LL EM                  +CK   + 
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ RG QP+  +Y  L+  L   G+ +  +KL   ++ +G   NV TY+++I
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMI 437

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S LC++G  ++A+ +    +E G  PDA +++ +I +  +  + D A + L  MI+   L
Sbjct: 438 SGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 101/206 (49%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ +  K      AI     M   G  PD+   N ++  FC  G    +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+  +G  PN  + NT+   L   G+  ++L    +++++G + D+++Y +L++ LC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    A+ LL  +E    RP V+ YN II G CK + +NE+ ++ + M  +G  PN  
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G    G   EA  L N ++
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMI 212



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 48/258 (18%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G+   +     +MV  G  P+V     +I +  + ++ ++A+ ++ E+L K   P+   Y
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           ++LI GFCK  +I  A  +L  +  RG   DVVTY  ++ +LC    ++ A  +F ++  
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              +P   TYT LI      G+   A KL   +                 G+CK+GM+ +
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDE 448

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNM------------------------------ 242
           A      +E  GC PD +++ +++R+L                                 
Sbjct: 449 ALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGERSP 508

Query: 243 GKWEEGEKLMTEMISRGL 260
            + ++ EKL+ EMI++GL
Sbjct: 509 NENDKAEKLLHEMIAKGL 526



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 47/101 (46%)

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P  + +N ++  L +      A+ L   M+     P + + NI+I  FC   ++  S  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           L  + + G +PN  T   L++G+   G   +++   + +V+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVA 108


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 247/489 (50%), Gaps = 25/489 (5%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N  L+++ V     MKL        KF+E+   ++  +  G  P+ V+   LI  + +  
Sbjct: 380 NATLITYSVLINGLMKL-------EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 432

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
               A+R+  +++ K   P+    N++I GFCK  Q+E A  +L+ + SRGFS +   + 
Sbjct: 433 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 492

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            +I  LC     ESA +   ++L  N +P     T L+     EG+   A++L   +   
Sbjct: 493 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G + +A + ++ +  RG   D I+YN L+      GK EEG
Sbjct: 553 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 612

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            KL  EM+ +G+EP+  TY++LI  +CR GK ++AV++    K + L P+ Y+Y  +I  
Sbjct: 613 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           YCK  +++   +    +++     + V YNT++ A+C+NGN  +A ++ + +   G PP 
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
            ++Y+++   + + G    A  +I EM  +G+ P+ + Y +LI   C+ G +D+ V +L 
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M S    P  I+Y ++I G+ K+  +  + ++L  M  KG  P+  TY +L  G    G
Sbjct: 793 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 852

Query: 489 WRAEAMELA 497
              E   LA
Sbjct: 853 KIEEGKLLA 861



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 232/473 (49%), Gaps = 17/473 (3%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
            FR   F  ++     +   G  P V  CT L+    +  +  K+  V E + +   PDV
Sbjct: 254 QFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDV 313

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + ++  I+ FCK  ++E A ++   +   G SP+VVTYN +I  LC  G ++ AF+  ++
Sbjct: 314 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 373

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +++D    T+ITY++LI   M   + ++A  +L E                  G CK G 
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +G A +    + S+G  P+ ++ N +++    +G+ E+ E ++ EM+SRG   N   ++ 
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC + + E A+  LR    + + P+      L+   CK+G+   A+E    ++  G
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              ++V  N ++   CK GN  +A+ + +K+ + G   +  +YNT+ S     G      
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 613

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM+ +GIEPD  TYN LI  +CR G +DEAV L  + +S    P V +Y ++I G+
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           CK  +I E  ++   +  +  + N   Y  LI      G   EA +L + + S
Sbjct: 674 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 235/480 (48%), Gaps = 18/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  DE+  F E MV +G    ++  + LI    +  K N+A  V+ E L
Sbjct: 351 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 410

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK   P+   YN LI G+CK   +  A ++   + S+G +P+ VT N +I   C  G +E
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + +++L          +T +I    +  + + A++ L EM                
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+G    A +    L  +G   ++++ N L+  L   G  +E  +L+ +M+ RG  
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + +TY+ LIS  C++GK E+   +     ++G+ PD ++Y+ LI   C+ G+LD A+  
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            +   S   +P++  Y  ++  +CK    ++  ++F +L       N   YNT+  A   
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G+ + A  +  +M SKGI P   TY+SLI  +C  G +++A  L+ +M      P V+ 
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y  +I G+CK  ++++ + VL  M      PN+ TY ++I+G    G    A +L + +V
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 216/466 (46%), Gaps = 34/466 (7%)

Query: 59  FIESMVANG-CKPDVVMCTKLIKK----FFQERKSNKAVRV---MEILEKYGEPDVF--A 108
            + S++ +G   P  ++  +LI +     F + K N+ + +   M  L + GE  V   A
Sbjct: 185 LMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPK-NRHIEIASAMADLNEVGESGVAVAA 243

Query: 109 YNALISGFC-KANQIELANK--VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            + LI  +C +   +   N   V   L ++G  P V T   ++ SL     +E ++ VF+
Sbjct: 244 VDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 303

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            + R    P V  ++  I A                   CK G V  A Q    +E  G 
Sbjct: 304 TM-RQGVSPDVYLFSTAINA------------------FCKGGKVEDAIQLFFDMEKLGV 344

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P+V++YN L+  L   G  +E  +   +M+  G+   ++TYS+LI+ L +  K  +A  
Sbjct: 345 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 404

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL+   EKG TP+   Y+ LI  YCK G L  A+     M+S G  P+ V  N+I+  FC
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  +QA  I E++   G   N  ++ T+   L  +     AL  + EML + + P++ 
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
              +L+  LC++G   +AV L   +    F   +++ N +I G CKT  + E++ +L  M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            E+G   ++ TY  LI G    G   E  +L   +V    I  DTF
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-QGIEPDTF 629


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 240/518 (46%), Gaps = 54/518 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +IK   RAG+ D +   +  +  +G +P VV    L+    +  +  +A R+   ++
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P +  +  LISG  +  Q      VL  ++  G +P+ V YN MIG  C +G   
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GM----------- 204
            A K+FD+++    K TV+TY ++ +A   EG+ + A K+LDEM   GM           
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 205 ---------------------------------------CKKGMVGQAFQFVRSLESRGC 225
                                                  CK G   +A +    +  +G 
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
             +V + N L+  L      +E  K++  M++ G+E + +TY+I+I   C+  K ++A+ 
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +     ++G  PD ++++  +  YC  G+++  +  LD M S+G  PDIV Y TI+  +C
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K  +  +A E   +L   G  PN   YN +      +G+   A+G++  M   GI+P  +
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYNSL+  +C  G+V+E   +            VI Y III GFCK  +I+E++     M
Sbjct: 634 TYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 693

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +G  PN+ TY  L+      G + EA +L + +VS+
Sbjct: 694 HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSL 731



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 237/525 (45%), Gaps = 89/525 (16%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+ +E+      MV    +P +V    LI    + ++  +   V++ ++ +G  P+  
Sbjct: 258 KSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEV 317

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD-- 165
            YN +I   C+      A K+ D + S+G    VVTYN++  +LC  G +E A K+ D  
Sbjct: 318 IYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377

Query: 166 ----------------------------------QLLRDNCKPTVITYTILIQATMLEGQ 191
                                             ++L    KP     T  IQ     G+
Sbjct: 378 LLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGK 437

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            ++A ++  ++                 G+C+   + +A + ++++ + G + D I+YN+
Sbjct: 438 HEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNI 497

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +++      K +E  +L  +MI RG +P++ T++I + + C  GK E+ + +L   K +G
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L PD  +Y  +I  YCK   +  A E+L  ++ +G  P+ V YN ++  + +NGN   A+
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRA-----------LGMIS-------- 393
            I + +   G  P   +YN++   +  +G  ++++A           LG+I         
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGF 677

Query: 394 --------------EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                         EM S+GI P+++TY +L+    + G  +EA  L  +M S    P  
Sbjct: 678 CKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +SYN +I GFC+   +++ +E  A M  +  K +  +Y   ++GI
Sbjct: 738 VSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 199/404 (49%), Gaps = 25/404 (6%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN--CKPTVITYTILIQATMLE 189
           L +RG SP + T +I++ +L   G ++ A KVF ++ RD     P V TYT +I+A    
Sbjct: 166 LSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKA---- 220

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                         +C+ G +  AF  +  L   G QP V++YN+L+  L   G+ EE  
Sbjct: 221 --------------LCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAF 266

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +L   M+   + P++VT+ ILIS L R  +  +   VL+  +  G+TP+   Y+ +I  +
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWH 326

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G    A++  D M+S G    +V YN I  A CK G  + A +I +++   G   + 
Sbjct: 327 CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC 386

Query: 370 SSYNTMFS-ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           S +N++ +  L  +G     L +I EML++ ++P++    + I  LC+ G  +EA  +  
Sbjct: 387 SLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWF 446

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +        V + N +I G C+   + E+ +VL AM   G + +  TY ++I+G     
Sbjct: 447 QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKAS 506

Query: 489 WRAEAMELANALVSMHAISRD--TFKRLNRTFPLLDVYKEISHL 530
              EA++L + ++       D  TF     T+  L   +EI HL
Sbjct: 507 KMDEAIQLRDDMIK-RGFKPDLFTFNIFLHTYCNLGKVEEILHL 549



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 19/300 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I+   +A K DE++   + M+  G KPD+      +  +    K  + + +++ ++  G
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+  Y  +I G+CKA  +  AN+ L  L   G  P+ V YN +IG     G I  A 
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + D +  +  +PT +TY  L+                    MC  G+V +         
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLM------------------YWMCHAGLVEEVKAVFAQCI 659

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +  +  VI Y ++++    +GK +E      EM SRG+ PN +TY+ L+ +  + G  E
Sbjct: 660 VKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKE 719

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  +       G+ PD+ SY+ LIS +C+   LD  +E    M S     D  +YN  +
Sbjct: 720 EASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 234/457 (51%), Gaps = 19/457 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + K+++      +F+E+L     MV +   P +V  T+L+    + ++ +  + + E 
Sbjct: 48  SNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQ 107

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G  P ++  N +++  C+++Q   A+  L ++   GF PD+VT+  ++   C    
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           IE A  +FDQ++    +P V+TYT LI         + A+++ ++MG             
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG------------- 214

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                  G +P+V++YN L+  L  +G+W +   L+ +M+ RG++PNV+T++ LI +  +
Sbjct: 215 -----DNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GK  +A ++ +   +  + PD ++Y  LI+  C  GRLD A +    M S+G  P+ V 
Sbjct: 270 VGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT 329

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y T++  FCK+   +   +IF ++S  G   N  +Y  +       G    A  + ++M 
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S+   PD  TYN L+  LC +G V++A+ +   M        +++Y III G CK  ++ 
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  ++F KG KPN  TY  +I G    G+  EA
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 215/438 (49%), Gaps = 19/438 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L+    +  +FD  +   E M   G  P +  C  ++    +  +  +A   +  + 
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EPD+  + +L+ GFC  N+IE A  + D++   GF P+VVTY  +I  LC    + 
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++F+Q+  +  +P V+TY  L+                   G+C+ G    A   +R
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVS------------------GLCEIGRWSDAAWLLR 246

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG QP+VI++  L+   + +GK  E ++L   MI   + P+V TY+ LI+ LC  G
Sbjct: 247 DMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG 306

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +    +  G  P+  +Y  LI  +CK  R++   +    M   G + + + Y 
Sbjct: 307 RLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYT 366

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +C  G  D A E+F ++     PP++ +YN +   L  +G   +AL +   M  +
Sbjct: 367 VLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            ++ + +TY  +I  +C+ G V++A  L   + S   +P VI+Y  +I GFC+   I+E+
Sbjct: 427 EMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486

Query: 459 IEVLAAMFEKGCKPNETT 476
             +   M E G  PNE+ 
Sbjct: 487 DALFKKMKEDGFLPNESV 504



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 168/352 (47%), Gaps = 17/352 (4%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--------------- 204
           A  +F +++     P+++ +T L+       + D  + L ++M +               
Sbjct: 66  ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125

Query: 205 --CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
             C+     +A  F+  +   G +PD++++  LL    +  + E+   L  +++  G  P
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NVVTY+ LI  LC++     AV++     + G+ P+  +Y+ L+S  C+ GR   A   L
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLL 245

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+  G  P+++ +  ++ AF K G   +A E+++ +  +   P+V +Y  + + L + 
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  M   M S G  P+E+TY +LI   C+   V++   +  +M         I+Y
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            ++I G+C   R + + EV   M  +   P+  TY +L++G+ Y G+  +A+
Sbjct: 366 TVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL 417


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 232/464 (50%), Gaps = 19/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +IK   +  K +ES   +E M+A GC PDV     +++ F +     KA  V + + 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +PD  +Y+ LI G  K  +++ + K+L  +  RG +P +  Y+ ++ +L     ++
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD+++R    P  + +  LI      G+   A +   +M                
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C  G + QA      ++S  C PDV++YN LL  +    + EEG KL   M + G  
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV+T+S LI  LCR G+ E A++V  +  E G  P+ Y+Y  LIS  C+  ++  A E 
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALW 380
            + M      PD V YN+++A +CK G+ D+A +++ ++S   G  P + ++NT+     
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G   RA  +++EM +KG+  D  TY  LI+ L R   +DEA+ +   M   +F    +
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           S    + G CKT  I+++  V  A  + G  PN  T+ +L E +
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 214/417 (51%), Gaps = 19/417 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           +V   + +IK   +E K  ++ +V+E +   G  PDVFA+N ++ GF ++N +E A +V 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +   G+ PD V+Y+I+I  L   G ++ + K+  +++     P++  Y+ L++A    
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            + D A  L DEM                 G+C+ G V  A +  + +   GCQP+V  Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+LL  L + G+ E+   L  EM S    P+VVTY+ L+ ++C+  + E+   +  A + 
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G  P+  ++  LI   C+ G L+ A+E    M+  GC P+   Y T+++  C+     Q
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLI 411
           A E+FEK++    PP+  +YN++ +     G    A  +  EM    G++P  +T+N+LI
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
              C+ G +  A  L+ +M +        +Y I+I G  +  +++E++EV   M EK
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 202/428 (47%), Gaps = 54/428 (12%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +VF Y+++I    K  + E + KVL+ + + G +PDV  +N ++        +E A +V+
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
             ++    KP  ++Y ILI      G+ D+++K+L EM M                  RG
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVM------------------RG 110

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P + +Y+ L+R L    + +    L  EMI  G  P+ + +  LI  LC+ GK +DA 
Sbjct: 111 QTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDAS 170

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +  +   + G  P+   Y+ L+   C  G+L+ A      M S  C PD+V YNT+L A 
Sbjct: 171 ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAV 230

Query: 345 CK-----------------------------------NGNADQALEIFEKLSDVGCPPNV 369
           CK                                    G  ++ALE+F  + + GC PN 
Sbjct: 231 CKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 290

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y T+ S L  +   I+A  +  +M    I PD + YNSLI+  C+ G +DEA  L  +
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 350

Query: 430 ME-STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           M      +PT++++N +I GFCK  ++  + E++A M  KG   +  TY +LI G+    
Sbjct: 351 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT 410

Query: 489 WRAEAMEL 496
              EA+E+
Sbjct: 411 KLDEALEV 418



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 19/318 (5%)

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +RD N    V TY+ +I++ + E + +++ K+L+EM                   + GC 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM------------------MAAGCN 42

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDV ++N +++        E+  ++   M+  G +P+ V+Y ILI  L + GK ++++ +
Sbjct: 43  PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI 102

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L     +G TP   +Y  L+ A  K  R+D A    D MI  G  PD + +  ++   C+
Sbjct: 103 LSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A E F+++   GC PNV  YN +   L SSG   +A  + +EM S    PD +T
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+L+  +C+   V+E   L   M +  + P VI+++ +I G C+T  + +++EV  +M 
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282

Query: 467 EKGCKPNETTYVLLIEGI 484
           E GCKPN+ TY  LI G+
Sbjct: 283 EAGCKPNKYTYTTLISGL 300



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +LI    +AGK  ++    + M  +GC+P+V +   L+       +  +A  +   ++
Sbjct: 153 FYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMK 212

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   PDV  YN L+   CKA ++E   K+ + +R+ G+ P+V+T++ +I  LC  G +E
Sbjct: 213 SHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELE 272

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +VF  +L   CKP   TYT LI                   G+C+   V QA +   
Sbjct: 273 KALEVFGSMLEAGCKPNKYTYTTLIS------------------GLCRAEKVIQARELFE 314

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRD 277
            +      PD ++YN L+      G  +E EKL  EM    GL+P +VT++ LI   C+ 
Sbjct: 315 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK   A +++     KGL  D+ +Y  LI+   +  +LD A+E    M     L D V+ 
Sbjct: 375 GKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 434

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            + +   CK GN DQA  +FE     G  PN  ++  +  +L   G
Sbjct: 435 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G+ +++L    SM+  GCKP+    T LI       ++ K ++  E+ E
Sbjct: 258 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC---RAEKVIQARELFE 314

Query: 100 KYGE----PDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSR 154
           K  +    PD  AYN+LI+G+CK   ++ A K+   +    G  P +VT+N +I   C  
Sbjct: 315 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +  A ++  ++          TY ILI       + D+A+++  +M            
Sbjct: 375 GKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 434

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK G + QA+    +    G  P+  ++ +L  +L+ +G+ E+ +KLM    +
Sbjct: 435 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKA 494

Query: 258 R 258
           R
Sbjct: 495 R 495


>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 555

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 218/458 (47%), Gaps = 52/458 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++   R  + D+++  +  MV +G  PD +                             
Sbjct: 141 LVRGLARIDQLDKAMVILRIMVMSGGVPDTI----------------------------- 171

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 YN +I   CK   I  A  +L+ +   G  PDV+TYN +I  +   G  E A +
Sbjct: 172 -----TYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQAIR 226

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            +   LR+ C P +ITYT+L++       + +AM +L++M +                  
Sbjct: 227 FWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAV------------------ 268

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC PD+++YN L+      G  EE   ++  ++S GLE N VTY+ L+ SLC +   ++
Sbjct: 269 EGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDE 328

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             ++L    +    P   +Y+ LI+  CK   L  AI+F   M+   CLPDIV YNT+L 
Sbjct: 329 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLG 388

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G  D A+E+   L    C P + +YN++   L   G   +AL +   ML  GI P
Sbjct: 389 AMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISP 448

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+IT  SLI   CR  +V+EA  +L +  +        +Y ++I G CK R +  +IEV+
Sbjct: 449 DDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVV 508

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             M   GCKP+ET Y  +++G+   G  +EA++L   L
Sbjct: 509 EIMLTSGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 546



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 191/379 (50%), Gaps = 21/379 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N ++ +LCS G +  A K+ + + R N  P   + + L++      Q DKAM +L
Sbjct: 99  DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158

Query: 200 DEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M M                 CKKG +  A   +  +   G  PDVI+YN ++R + + 
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDH 218

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G  E+  +   + +  G  P ++TY++L+  +CR   +  A+DVL     +G  PD  +Y
Sbjct: 219 GNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTY 278

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L++  C+ G L+     + +++S G   + V YNT+L + C N   D+  EI   +  
Sbjct: 279 NSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQ 338

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P V +YN + + L  +    RA+    +ML +   PD +TYN+L+  + ++GMVD+
Sbjct: 339 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDD 398

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  ++ST   P +I+YN +I G  +   + +++E+   M + G  P++ T   LI 
Sbjct: 399 AIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLI- 457

Query: 483 GIGYGGWRAEAMELANALV 501
              YG  RA  +E A+ ++
Sbjct: 458 ---YGFCRANLVEEASQVL 473



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 153/299 (51%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C  G +  A + V  +      P   S + L+R L  + + ++   ++  M+  G  P+
Sbjct: 110 LCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVILRIMVMSGGVPD 169

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +TY+++I +LC+ G    A+ +L      G  PD  +Y+ +I      G  + AI F  
Sbjct: 170 TITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQAIRFWK 229

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             + +GC P ++ Y  ++   C+   + +A+++ E ++  GC P++ +YN++ +     G
Sbjct: 230 DQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRG 289

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           +      +I  +LS G+E + +TYN+L+  LC +   DE   +L  M  T + PTVI+YN
Sbjct: 290 NLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYN 349

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I+I G CK R ++ +I+    M E+ C P+  TY  L+  +   G   +A+EL   L S
Sbjct: 350 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKS 408



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 170/340 (50%), Gaps = 18/340 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+  F  G  ++++ F +  + NGC P ++  T L++   +   S +A+ V+E + 
Sbjct: 208 YNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMA 267

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN+L++  C+   +E    V+  + S G   + VTYN ++ SLCS    +
Sbjct: 268 VEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWD 327

Query: 159 SAFKVFDQLLRDNCKPTVITYTILI----QATMLEGQTDKAMKLLDEM------------ 202
              ++ + + + +  PTVITY ILI    +A +L    D   ++L++             
Sbjct: 328 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLL 387

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             M K+GMV  A + +  L+S  C P +I+YN ++  L   G  ++  +L   M+  G+ 
Sbjct: 388 GAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGIS 447

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T   LI   CR    E+A  VL+    +G      +Y  +I   CK   +++AIE 
Sbjct: 448 PDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEV 507

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++ M++ GC PD   Y  I+    + G   +A+++ +KL+
Sbjct: 508 VEIMLTSGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLT 547


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 233/476 (48%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P  +    ++    ++  +  A+ ++  +E
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  Y+A+I   CK  +   A  +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--------------- 351

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+Y+ ++       + +  E +   M ++G  PN++T++ LI   C  
Sbjct: 352 ---LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L    E GL  D  +Y+ LI  +   G L+ A++ L  MIS G  PDIV  
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           +T+L   C NG    ALE+F+ +              G  P+V +YN + S L + G  +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  +   M S  F P V+++  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   N  TY+ LI G    G    A+++   ++S
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 241/493 (48%), Gaps = 30/493 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    R  + D  +   + M     + D+   T LIK F    K   A+     + 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  +N L+ G C  +++  A  +  ++      P+VVT+  ++  LC  G I 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++ D  +PT ITY  ++     +G T  A+ LL +M                
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK G    A      ++ +G  PD+ +YN ++    + G+W + E+L+ EM+ R +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y  +I  +CK  RLD A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M + GC P+++ +NT++  +C     D  +E+  ++++ G   + ++YNT+    +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR------ 434
             GD   AL ++ EM+S G+ PD +T ++L+  LC +G + +A+ +   M+ ++      
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 435 -----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
                  P V +YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+     
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 490 RAEAMELANALVS 502
             EA ++ +++ S
Sbjct: 562 LDEATQMFDSMGS 574



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 201/428 (46%), Gaps = 20/428 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL   F + +    A+ +  ++L     P V  +  L+    +  + +L   +  ++  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
               D+ ++ I+I   CS   +  A   F ++ +    P V+T+  L+            
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH----------- 157

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C +  V +A      +    C+P+V+++  L+  L   G+  E   L+  M
Sbjct: 158 -------GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKDGR 314
           +  GL+P  +TY  ++  +C+ G T  A+++LR  +E   + P+   Y  +I + CKDGR
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A      M   G  PD+  YN+++  FC +G    A ++ +++ +    P+V +YN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +A    G    A  +  EML +GI P+ ITY+S+I   C+   +D A  +   M +  
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P +I++N +I G+C  +RI++ +E+L  M E G   + TTY  LI G    G    A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 495 ELANALVS 502
           +L   ++S
Sbjct: 451 DLLQEMIS 458



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +   + ++G SP+++T+N +I   C    I+   ++  ++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ LL EM                 G+C  G + 
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELKRAVAMLEKL 677



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TY+ MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P +IT+  LI       + D  M+LL EM                 G    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A   ++ + S G  PD+++ + LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V TY+ILIS L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  D M S    P++V + T++  +CK G  D  LE+F ++   G   N  +Y T+    
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++ L     +  AV +L  ++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI   +  G  + +L  ++ M+++G  PD+V C  L+       K   A+ + ++
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++ + +  RG  PD +TY+
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG-- 608

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G+V  A                I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 609 RRGIVANA----------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 653 TIRNMLTGLWSKEELKRAVAML 674


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 219/414 (52%), Gaps = 20/414 (4%)

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELANKVLDRLRSRGFSPDVVTYNIM 147
           KA+ ++++ +  G  P V +YNA++    +  + +  A KV   + + G S +V +YNI+
Sbjct: 150 KALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNIL 209

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I   C+ G +E   + F+++ R+ C P V+TY  +I A                   CK 
Sbjct: 210 IRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGA------------------YCKL 251

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             + +AF+ +RS+   G +P++++YNM++  L  +G+ EE   ++ EM  +G  P+ VTY
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L++  C+ G    A+ +       GL PD  +Y  LI+  CK G L+ A+EF D M  
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P+ V Y +++  F + G  D+A  I++++   G PP + +YN + +    SG    
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G++  M  KG+ PD ++Y+++I+  CR   +D A  +  +M      P  I+Y+ +I 
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQ 491

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G C+ RR+NE+ ++   M  K   P+E TY  LI G    G   EA+ L + ++
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 231/493 (46%), Gaps = 69/493 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  +  L F E M  N C P+VV    +I  + + ++ ++A +++  +   G
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP++  YN +I+G C+  +IE  + VL  +  +GF+PD VTYN ++   C  G    A 
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  ++LR+   P V+TYT LI                    MCK G + +A +F   + 
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINT------------------MCKAGNLNRAMEFFDQMH 370

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +P+ ++Y  L+      G  +E  ++  EMI  G  P +VTY+ L++  C  G+ E
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+ +LR  + KGL+PD  SY  +I+ +C+   LD A +    M+  G  PD + Y++++
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C+    ++A ++F+++ +    P+  +Y ++ +     GD   AL +  EM+ KG  
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFL 550

Query: 402 PDEITYNSLI------------------------------------SC------------ 413
           PD +TYN LI                                    SC            
Sbjct: 551 PDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALI 610

Query: 414 --LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C  G+++EA  +   M     +P    YN+II G C+   ++++ ++   M + G  
Sbjct: 611 KGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFI 670

Query: 472 PNETTYVLLIEGI 484
           P+  T + L++ +
Sbjct: 671 PHTVTIIALVKAL 683



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 196/367 (53%), Gaps = 21/367 (5%)

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSL--CSRGMIESAFKVFDQLLRDNCKPTVI 177
           N IE A  ++D  +  GF P V++YN ++ S+  C + +I  A KV+ +++       V 
Sbjct: 146 NFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVF 204

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y ILI+                  G C  G +    +F   +E   C P+V++YN ++ 
Sbjct: 205 SYNILIR------------------GFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
               + + +E  KL+  M   GLEPN++TY+++I+ LCR G+ E+   VL     KG  P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  +Y+ L++ YCK G    A+     M+ +G  PD+V Y +++   CK GN ++A+E F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +++   G  PN  +Y ++ +     G    A  +  EM+  G  P  +TYN+L++  C  
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G ++EA+GLL  ME     P V+SY+ II GFC+ + ++ + ++ A M EKG  P+  TY
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 478 VLLIEGI 484
             LI+G+
Sbjct: 487 SSLIQGL 493



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 221/450 (49%), Gaps = 23/450 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERK----SNKAVRVMEILEKYGEPDVFAY 109
           +++L  ++    NG  P V+    ++    + RK    + K  R  E++      +VF+Y
Sbjct: 149 EKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYR--EMIASGVSLNVFSY 206

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI GFC A  +E+  +  + +      P+VVTYN +IG+ C    I+ AFK+   +  
Sbjct: 207 NILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGL 266

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
           +  +P ++TY ++I      G+ ++   +L EM                 G CK G   Q
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      +   G  PDV++Y  L+ T+   G      +   +M  RGL PN VTY+ LI+
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              + G  ++A  +       G  P   +Y+ L++ +C  GR++ AI  L  M   G  P
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+V+Y+TI+A FC+    D+A ++  ++ + G  P+  +Y+++   L        A  + 
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EML+K + PDE TY SLI+  C++G ++EA+ L  +M    F P  ++YN++I G  K 
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            R  E+  +L  +F     PN  TY  LIE
Sbjct: 567 ARTREAKRLLLKLFYDESIPNGITYDTLIE 596



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 201/458 (43%), Gaps = 68/458 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ +E+   +  M   G  PD V    L+  + +    ++A+ +  E+L     PDV 
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y +LI+  CKA  +  A +  D++  RG  P+ VTY  +I     +G ++ A++++D++
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +R    PT++TY  L+    + G+ ++A+ LL  M                 G C+   +
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AFQ    +  +G  PD I+Y+ L++ L    +  E   L  EM+++ L P+  TY+ L
Sbjct: 465 DRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSL 524

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD--------------------------- 303
           I+  C++G   +A+++     +KG  PD  +Y+                           
Sbjct: 525 INGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDES 584

Query: 304 -----------------------PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
                                   LI  +C  G ++ A +  + MI     P+   YN I
Sbjct: 585 IPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVI 644

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   C++GN  +A ++++++ D G  P+  +   +  AL+S G   +   +I ++L    
Sbjct: 645 IHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCK 704

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
             D     +L+    ++G +D    LL +M    F P+
Sbjct: 705 LSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 233/476 (48%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P  +    ++    ++  +  A+ ++  +E
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  Y+A+I   CK  +   A  +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--------------- 351

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+Y+ ++       + +  E +   M ++G  PN++T++ LI   C  
Sbjct: 352 ---LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L    E GL  D  +Y+ LI  +   G L+ A++ L  MIS G  PDIV  
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           +T+L   C NG    ALE+F+ +              G  P+V +YN + S L + G  +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  +   M S  F P V+++  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   N  TY+ LI G    G    A+++   ++S
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 241/493 (48%), Gaps = 30/493 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    R  + D  +   + M     + D+   T LIK F    K   A+     L 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 141

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  +N L+ G C  +++  A  +  ++      P+VVT+  ++  LC  G I 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++ D  +PT ITY  ++     +G T  A+ LL +M                
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK G    A      ++ +G  PD+ +YN ++    + G+W + E+L+ EM+ R +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y  +I  +CK  RLD A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M + GC P+++ +NT++  +C     D  +E+  ++++ G   + ++YNT+    +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR------ 434
             GD   AL ++ EM+S G+ PD +T ++L+  LC +G + +A+ +   M+ ++      
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 435 -----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
                  P V +YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+     
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 490 RAEAMELANALVS 502
             EA ++ +++ S
Sbjct: 562 LDEATQMFDSMGS 574



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 201/428 (46%), Gaps = 20/428 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL   F + +    A+ +  ++L     P V  +  L+    +  + +L   +  ++  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
               D+ ++ I+I   CS   +  A   F +L +    P V+T+  L+            
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH----------- 157

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C +  V +A      +    C+P+V+++  L+  L   G+  E   L+  M
Sbjct: 158 -------GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKDGR 314
           +  GL+P  +TY  ++  +C+ G T  A+++LR  +E   + P+   Y  +I + CKDGR
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR 270

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A      M   G  PD+  YN+++  FC +G    A ++ +++ +    P+V +YN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +A    G    A  +  EML +GI P+ ITY+S+I   C+   +D A  +   M +  
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P +I++N +I G+C  +RI++ +E+L  M E G   + TTY  LI G    G    A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 495 ELANALVS 502
           +L   ++S
Sbjct: 451 DLLQEMIS 458



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +   + ++G SP+++T+N +I   C    I+   ++  ++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ LL EM                 G+C  G + 
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELKRAVAMLEKL 677



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TY+ MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P +IT+  LI       + D  M+LL EM                 G    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A   ++ + S G  PD+++ + LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V TY+ILIS L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  D M S    P++V + T++  +CK G  D  LE+F ++   G   N  +Y T+    
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++ L     +  AV +L  ++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI   +  G  + +L  ++ M+++G  PD+V C  L+       K   A+ + ++
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++ + +  RG  PD +TY+
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG-- 608

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G+V  A                I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 609 RRGIVANA----------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 653 TIRNMLTGLWSKEELKRAVAML 674


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 233/476 (48%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P  +    ++    ++  +  A+ ++  +E
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  Y+A+I   CK  +   A  +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--------------- 351

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+Y+ ++       + +  E +   M ++G  PN++T++ LI   C  
Sbjct: 352 ---LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L    E GL  D  +Y+ LI  +   G L+ A++ L  MIS G  PDIV  
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           +T+L   C NG    ALE+F+ +              G  P+V +YN + S L + G  +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  +   M S  F P V+++  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   N  TY+ LI G    G    A+++   ++S
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 236/498 (47%), Gaps = 65/498 (13%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKV 128
           P VV   KL+    +  + +  + + + +E K    D++++N LI  FC  +++  A   
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++   G  PDVVT+  ++  LC    +  A   F Q+    C+P V+T+T L+     
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES--------- 222
           EG+  +A+ LLD M                 GMCKKG    A   +R +E          
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 223 ---------------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                                      +G  PD+ +YN ++    + G+W + E+L+ EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + R + P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y  +I  +CK  RL
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A      M + GC P+++ +NT++  +C     D  +E+  ++++ G   + ++YNT+
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR- 434
               +  GD   AL ++ EM+S G+ PD +T ++L+  LC +G + +A+ +   M+ ++ 
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 435 ----------FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                       P V +YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 485 GYGGWRAEAMELANALVS 502
                  EA ++ +++ S
Sbjct: 557 CKQSRLDEATQMFDSMGS 574



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +   + ++G SP+++T+N +I   C    I+   ++  ++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ LL EM                 G+C  G + 
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELKRAVAMLEKL 677



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TY+ MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P +IT+  LI       + D  M+LL EM                 G    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A   ++ + S G  PD+++ + LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V TY+ILIS L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  D M S    P++V + T++  +CK G  D  LE+F ++   G   N  +Y T+    
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++ L     +  AV +L  ++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 53/399 (13%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +E A  +F  +LR    P+V+ +  L+   +   + D  + L  +M              
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 203 --------------------------------------GMCKKGMVGQAFQFVRSLESRG 224
                                                 G+C +  V +A  F   +    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+P+V+++  L+  L   G+  E   L+  M+  GL+P  +TY  ++  +C+ G T  A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 285 DVLRAAKE-KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           ++LR  +E   + P+   Y  +I + CKDGR   A      M   G  PD+  YN+++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC +G    A ++ +++ +    P+V +YN + +A    G    A  +  EML +GI P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY+S+I   C+   +D A  +   M +    P +I++N +I G+C  +RI++ +E+L 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M E G   + TTY  LI G    G    A++L   ++S
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 153/317 (48%), Gaps = 14/317 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V+ +  L+  ++ M + +    L  +M  + +  ++ +++ILI   C   K   A+  
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                + GL PD  ++  L+   C + R+  A++F   M    C P++V + T++   C+
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS-KGIEPDEI 405
            G   +A+ + +++ + G  P   +Y T+   +   GD + AL ++ +M     I P+ +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+++I  LC+DG   +A  L  +M+     P + +YN +I+GFC + R +++ ++L  M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR--------DTFKRLNRT 517
            E+   P+  TY  LI      G   EA EL + ++    I          D F + NR 
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR- 375

Query: 518 FPLLDVYKEISHL-ATK 533
              LD  + + +L ATK
Sbjct: 376 ---LDAAEHMFYLMATK 389



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI   +  G  + +L  ++ M+++G  PD+V C  L+       K   A+ + ++
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++ + +  RG  PD +TY+
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG-- 608

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G+V  A                I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 609 RRGIVANA----------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 653 TIRNMLTGLWSKEELKRAVAML 674


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 210/403 (52%), Gaps = 19/403 (4%)

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +E K  KA   +  +E  G +P+V +YN +I G+     IE A ++LD +R +G  PD  
Sbjct: 239 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TY  +I  +C  G +E A  +FD+++     P  +TY  LI                   
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID------------------ 340

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C KG + +AF +   +  +G  P V +YN+L+  L   G+  E + ++ EM  +G+ P
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 400

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + +TY+ILI+   R G  + A D+      KG+ P   +Y  LI    +  R+  A +  
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + ++  G  PD++ +N ++   C NGN ++A  + +++     PP+  ++NT+       
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  ++ EM  +GI+PD I+YN+LIS   R G + +A  +  +M S  F PT+++Y
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           N +I   CK +  + + E+L  M  KG  P+++TY+ LIEG+G
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 139/255 (54%)

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V ++N+++  L   GK ++  + +  M   G +PNVV+Y+ +I      G  E A  +L 
Sbjct: 227 VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 286

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A + KG+ PD+Y+Y  LIS  CK+GRL+ A    D M+  G +P+ V YNT++  +C  G
Sbjct: 287 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 346

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + ++A    +++   G  P+VS+YN +  AL+  G    A  MI EM  KGI PD ITYN
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+   R G   +A  L  +M S    PT ++Y  +I    +  R+ E+ ++   + ++
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466

Query: 469 GCKPNETTYVLLIEG 483
           G  P+   +  +++G
Sbjct: 467 GVSPDVIMFNAMVDG 481



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 5/201 (2%)

Query: 27  NTHLLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +  +LS  ++ T   +  LI    R  +  E+    E ++  G  PDV+M   ++     
Sbjct: 425 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCA 484

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
                +A  ++ E+  K   PD   +N L+ G C+  ++E A  +LD ++ RG  PD ++
Sbjct: 485 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 544

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN +I     RG I+ AF+V D++L     PT++TY  LI+      + D A +LL E  
Sbjct: 545 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE-- 602

Query: 204 MCKKGMVGQAFQFVRSLESRG 224
           M  KG+      ++  +E  G
Sbjct: 603 MVNKGISPDDSTYLSLIEGMG 623



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           ++ ++   C+   AD+A + F  + + G  P + + N M S          A  + +EM 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              I     T+N +++ LC++G + +A   +  ME   F+P V+SYN II G+     I 
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +  +L AM  KG +P+  TY  LI G+   G   EA  L + +V +
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 91/208 (43%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R     +  D L  ++++     +  +D L+   C+  R D A +    M   G +P I 
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             N +L+ F K    + A  ++ ++  +     V ++N M + L   G   +A   I  M
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 253

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              G +P+ ++YN++I      G ++ A  +L  M      P   +Y  +I G CK  R+
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 313

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  +   M E G  PN  TY  LI+G
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDG 341


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 234/485 (48%), Gaps = 38/485 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I+     G  ++ L F+  M   G  P+VV    LI    +++K  +A+ ++  +   G
Sbjct: 213 IIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGG 272

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              ++ +YN++I+G C   ++    ++++ +R +G  PD VTYN ++   C  G +    
Sbjct: 273 VAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGL 332

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +++     P V+TYT LI                    MCK G + +A +    + 
Sbjct: 333 VLLSEMVGKGLSPNVVTYTTLINC------------------MCKAGNLSRAVEIFDQMR 374

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +P+  +Y  L+      G   E  K+++EMI  G  P+VVTY+ L+   C  G+ +
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +AV +LR   E+GL PD  SY  +I+ +C++  L  A +  + M+  G LPD V Y++++
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C      +A ++F ++   G PP+  +Y ++ +A    G+  +AL +  EM+ +G  
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII--------------- 446
           PD +TY+ LI+ L +      A  LL+ +      P  ++YN +I               
Sbjct: 555 PDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLV 614

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA----MELANALVS 502
            GFC    +NE+  V   M ++  KPN   Y L+I G   GG   +A    MEL ++  +
Sbjct: 615 KGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFA 674

Query: 503 MHAIS 507
            H ++
Sbjct: 675 CHTVA 679



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 23/418 (5%)

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCK---ANQIEL--ANKVLDRLRSRGFSPDVVT 143
           KA+ ++ +  ++G  P V +YNA++    +   +N  +   A +V   +   G SP+V T
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM- 202
           YN++I  + S+G +E       ++ ++   P V+TY  LI A+  + +  +AM LL  M 
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+C KG + +  + V  +  +G  PD ++YN L+      G   
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +G  L++EM+ +GL PNVVTY+ LI+ +C+ G    AV++    + +GL P+  +Y  LI
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             +C+ G ++ A + L  MI  G  P +V YN ++  +C  G   +A+ I   + + G P
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+V SY+T+ +      +  +A  M  EM+ KG+ PD +TY+SLI  LC    + EA  L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             +M      P  ++Y  +I  +C    +++++ +   M ++G  P+  TY +LI G+
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 20/442 (4%)

Query: 43  LIKRSFRAGK-FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           L++RS    + +D++      MV NG  P+V     +I+    +    K +  M  +EK 
Sbjct: 177 LLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE 236

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  P+V  YN LI   CK  +++ A  +L  +   G + ++++YN +I  LC +G +   
Sbjct: 237 GISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEV 296

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ +++      P  +TY  L+                   G CK+G + Q    +  +
Sbjct: 297 GELVEEMRGKGLVPDEVTYNTLVN------------------GFCKEGNLHQGLVLLSEM 338

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  P+V++Y  L+  +   G      ++  +M  RGL PN  TY+ LI   C+ G  
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A  VL      G +P   +Y+ L+  YC  GR+  A+  L  M+  G  PD+V+Y+T+
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +A FC+     +A ++ E++ + G  P+  +Y+++   L      + A  +  EM+ +G+
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PDE+TY SLI+  C DG + +A+ L  +M    F P  ++Y+++I G  K  R   +  
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  +F +   P++ TY  LIE
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIE 600



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 195/380 (51%), Gaps = 30/380 (7%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM-----IESAFKVFDQLLRDNCKPTV 176
           + LAN+        GF+P V++YN ++ +L  R        + A +VF  ++R+   P V
Sbjct: 155 LHLANR-------HGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            TY ++I+  + +G  +K +                   F+R +E  G  P+V++YN L+
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLG------------------FMRKMEKEGISPNVVTYNTLI 249

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                  K +E   L+  M   G+  N+++Y+ +I+ LC  G+  +  +++   + KGL 
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  +Y+ L++ +CK+G L   +  L  M+  G  P++V Y T++   CK GN  +A+EI
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F+++   G  PN  +Y T+       G    A  ++SEM+  G  P  +TYN+L+   C 
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G V EAVG+L  M      P V+SY+ +I GFC+ R + ++ ++   M EKG  P+  T
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 477 YVLLIEGIGYGGWRAEAMEL 496
           Y  LI+G+       EA +L
Sbjct: 490 YSSLIQGLCLQQKLVEAFDL 509



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 210/457 (45%), Gaps = 35/457 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G+  E    +E M   G  PD V    L+  F +E   ++ + ++ E++ K   P+V  Y
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY 350

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+  CKA  +  A ++ D++R RG  P+  TY  +I   C +G++  A+KV  +++ 
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV 410

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P+V+TY  L+      G+  +A+ +L  M                 G C++  +G+
Sbjct: 411 SGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGK 470

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AFQ    +  +G  PD ++Y+ L++ L    K  E   L  EM+ RGL P+ VTY+ LI+
Sbjct: 471 AFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLIN 530

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           + C DG+   A+ +     ++G  PD  +Y  LI+   K  R  +A   L  +  +  +P
Sbjct: 531 AYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVP 590

Query: 333 DIVNYNTIL---------------AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           D V YNT++                 FC  G  ++A  +F+ +      PN + YN M  
Sbjct: 591 DDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIH 650

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD-MESTRFR 436
                G+  +A  +  E+         +   +L+  L R+GM DE   LL + + S R  
Sbjct: 651 GHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLN 710

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
              ++  ++ + F K   ++  + VL  M + G  P+
Sbjct: 711 DAKVAKVLVEVNF-KEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 171/400 (42%), Gaps = 37/400 (9%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           +T+++C+    N    +S + E      +      E  +  LI    + G  +E+   + 
Sbjct: 351 TTLINCMCKAGN----LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKAN 120
            M+ +G  P VV    L+  +    +  +AV ++  ++E+   PDV +Y+ +I+GFC+  
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           ++  A ++ + +  +G  PD VTY+ +I  LC +  +  AF +F +++R    P  +TYT
Sbjct: 467 ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYT 526

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            LI A  ++G+  KA++L DEM                 G+ KK     A + +  L   
Sbjct: 527 SLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYE 586

Query: 224 GCQPDVISYNMLLRTLLN---------------MGKWEEGEKLMTEMISRGLEPNVVTYS 268
              PD ++YN L+    N                G   E +++   M+ R  +PN   Y+
Sbjct: 587 ESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYN 646

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ++I    R G    A ++    +         +   L+ A  ++G  D     L  ++  
Sbjct: 647 LMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRS 706

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
             L D      ++    K GN D  L +  +++  G  P+
Sbjct: 707 CRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 233/464 (50%), Gaps = 34/464 (7%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
            L F + M  NGC P+VV    +I  + + +++++A   +  +   G EP++  +N +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G C+  +++  ++VL  +  +G+ PD VTYN ++   C  G    A  +  +++R+   P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            V+TYT LI +                  MCK G + +A +F   +  RG  P+  +Y  
Sbjct: 122 NVVTYTSLINS------------------MCKAGNLNRAMEFFDQMHVRGLCPNERTYTT 163

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++      G  +E  +++ EM   G  P++VTY+ LI+  C  G+ E+A+ +L+    KG
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  SY  +IS + ++  LD A +    MI    LPD V Y++++   C+     +A 
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEAC 283

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++F+++  +  PP+  +Y T+ +A    GD  +AL +  EM+ KG  PD +TYN LI+ L
Sbjct: 284 DMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIII---------------LGFCKTRRINESI 459
            +     EA  LL+ +      P+ ++YN +I                GFC    ++E+ 
Sbjct: 344 NKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEAD 403

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +V  +M  K  KPNE  Y ++I G    G   +A +L   +V +
Sbjct: 404 QVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%)

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           + + F   M  +GCLP++V YNT++  +CK    D+A      +   G  PN+ ++N + 
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           + L   G       ++ EM  KG  PDE+TYN+L++  C++G   +A+ L  +M      
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V++Y  +I   CK   +N ++E    M  +G  PNE TY  +I G    G   EA  +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 497 ANAL 500
            N +
Sbjct: 181 LNEM 184



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 12/289 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R  + D +      M+     PD V  + LI+   ++R+  +A  +  E+L     PD F
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI+ +CK   +  A  + D +  +GF PD VTYN++I  L  +   + A ++  +L
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
             D+  P+ +TY  LI+      +   A+ L+   G C KG++ +A Q   S+ ++  +P
Sbjct: 360 FYDDSIPSAVTYNTLIE-NCCNIEFKSAVALVK--GFCMKGLMDEADQVFESMINKNHKP 416

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR---DGKTEDAV 284
           +   YN+++     +G   +  KL  EM+     P+ VT   L+ +L     DG+  + +
Sbjct: 417 NEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVI 476

Query: 285 -DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            D+LR+ K      DA     L+    K+G +D+    L  M  DG +P
Sbjct: 477 GDILRSCK----LTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 231/446 (51%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+++      MV +   P +V  T+L+      R+    +   + +E YG   D++++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI  FC+ +++  A  VL ++   G+ P +VT+  ++   C    I  AF +   +++ 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P V+ Y  LI                   G+CK G +  A + +  +E +G   DV+
Sbjct: 171 GYEPNVVVYNTLID------------------GLCKNGELNIALELLNEMEKKGLGADVV 212

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN LL  L   G+W +  +++ +M+ R + P+VVT++ LI    + G  ++A ++ +  
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            +  + P+  +Y+ +I+  C  GRL  A +  D M S GC P++V YNT+++ FCK    
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+ +++F+++S  G   ++ +YNT+       G    AL +   M+S+ + PD IT+  L
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  LC +G ++ A+    DM  +     +++YNI+I G CK  ++ ++ E+   +  +G 
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           KP+  TY ++I G+   G R EA EL
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADEL 478



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 194/393 (49%), Gaps = 19/393 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R  +   +L  +  M+  G +P +V    L+  F    +   A  ++ ++ 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP+V  YN LI G CK  ++ +A ++L+ +  +G   DVVTYN ++  LC  G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   +++ +  P V+T+T LI   + +G  D+A +L  EM              ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--------------IQ 274

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S       P+ ++YN ++  L   G+  + +K    M S+G  PNVVTY+ LIS  C+  
Sbjct: 275 S----SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++ + + +    +G   D ++Y+ LI  YC+ G+L +A++   +M+S    PDI+ + 
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   C NG  + AL  F+ + +      + +YN M   L  +    +A  +   +  +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           G++PD  TY  +I  LC++G   EA  L+  M+
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMK 483



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 18/345 (5%)

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E AF +F +++     P+++ +T L+ AT    + +  +                   F 
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI------------------YFS 94

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +E  G   D+ S+ +L+       +      ++ +M+  G EP++VT+  L+   C  
Sbjct: 95  QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +  DA  ++    + G  P+   Y+ LI   CK+G L++A+E L+ M   G   D+V Y
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT+L   C +G    A  +   +      P+V ++  +       G+   A  +  EM+ 
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             ++P+ +TYNS+I+ LC  G + +A      M S    P V++YN +I GFCK R ++E
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +++   M  +G   +  TY  LI G    G    A+++   +VS
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 232 YNMLLRT-LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           Y   LRT  L+  ++E+   L  EM+     P++V ++ L+++     + E  +   +  
Sbjct: 38  YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D YS+  LI  +C+  RL  A+  L  M+  G  P IV + ++L  FC     
Sbjct: 98  ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             A  +   +   G  PNV  YNT+   L  +G+   AL +++EM  KG+  D +TYN+L
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC  G   +A  +L DM      P V+++  +I  F K   ++E+ E+   M +   
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            PN  TY  +I G+   G   +A +  + + S
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 218/418 (52%), Gaps = 22/418 (5%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANK 127
           K  V+ C  L+    +E +      V  E++ +   P++  +N +I+G CK  ++  A  
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK---VFDQLLRDNCKPTVITYTILIQ 184
           V+D ++  GF P+VVTYN +I   C  G +   +K   +  +++ +   P  +T+ +LI 
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G CK   +  A +    ++S+G +P V++YN L+  L N GK
Sbjct: 312 ------------------GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGK 353

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
             E + L+ EM+S  L+PNV+TY+ LI+  C+    E+A ++     ++GLTP+  +++ 
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+  YCK G+++ A      M+  G LP+   YN ++  FC+ G  ++   +  ++   G
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              +  +YN + SA     +  +A  +I EML KG++P  +TYN L++  C +G +  A+
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            L   ME       V++YN++I G+C+  ++ ++  +L  M EKG  PN TTY ++ E
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 199/403 (49%), Gaps = 29/403 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + GK +++   ++ M   G  P+VV    LI  + +  +  K  +   IL+
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292

Query: 100 KYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +  E    P+   +N LI GFCK   +  A KV + ++S+G  P VVTYN ++  LC+ G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A  + D++L  N KP VITY  LI                   G CKK ++ +A +
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALIN------------------GYCKKKLLEEARE 394

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
              ++  +G  P+VI++N LL      GK EE   L   M+ +G  PN  TY+ LI   C
Sbjct: 395 LFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFC 454

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R+GK E+  ++L   + +G+  D  +Y+ LISA+C+      A   +D M+  G  P  +
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN +L  +C  GN   AL + +++   G   NV +YN +       G    A G+++EM
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L KG+ P+  TY      + ++ M+++  G L D+E   +  +
Sbjct: 575 LEKGLIPNRTTYE-----IIKEEMMEK--GFLPDIEGHLYHAS 610



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 206/431 (47%), Gaps = 25/431 (5%)

Query: 87  KSNKAVRVMEILEKYGEP----DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +++K V  +E  ++ G+      V + N L+S   K N+      V   +  R  SP+++
Sbjct: 172 ENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLI 231

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T+N +I  LC  G +  A  V D +      P V+TY  LI                   
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLID------------------ 273

Query: 203 GMCKKGMVGQAFQ---FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
           G CK G VG+ ++    ++ +      P+ +++N+L+             K+  EM S+G
Sbjct: 274 GYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG 333

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+P VVTY+ L++ LC +GK  +A  +L       L P+  +Y+ LI+ YCK   L+ A 
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAR 393

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E  D +   G  P+++ +NT+L  +CK G  ++A  + + + + G  PN S+YN +    
Sbjct: 394 ELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGF 453

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G       +++EM  +G++ D +TYN LIS  C      +A  L+ +M     +P+ 
Sbjct: 454 CREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++YNI++ G+C    +  ++ +   M ++G   N  TY +LI+G    G   +A  L N 
Sbjct: 514 LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNE 573

Query: 500 LVSMHAISRDT 510
           ++    I   T
Sbjct: 574 MLEKGLIPNRT 584



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 21/388 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  + + ++  L  +   R     +   V++ N ++ +L           V+ +++R  
Sbjct: 166 LVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK 225

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             P +IT+  +I                   G+CK G + +A   V  ++  G  P+V++
Sbjct: 226 ISPNLITFNTVIN------------------GLCKVGKLNKAGDVVDDMKVWGFWPNVVT 267

Query: 232 YNMLLRTLLNMG---KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           YN L+     MG   K  + + ++ EM+   + PN VT+++LI   C+D     A+ V  
Sbjct: 268 YNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             + +GL P   +Y+ L++  C +G+L+ A   LD M+S    P+++ YN ++  +CK  
Sbjct: 328 EMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKK 387

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A E+F+ +   G  PNV ++NT+       G    A  +   ML KG  P+  TYN
Sbjct: 388 LLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   CR+G ++E   LL +M+    +   ++YNI+I  +C+ +   ++  ++  M +K
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G KP+  TY +L+ G    G    A+ L
Sbjct: 508 GLKPSHLTYNILLNGYCMEGNLRAALNL 535


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 223/458 (48%), Gaps = 4/458 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKF+++   I  M++ G  PD    +K+I       K  KA ++ + +++ G  PDV+ Y
Sbjct: 201 GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A    D +   G +P+VVTY  +I +      +  A +V++ +L 
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS 320

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P ++TYT LI      G+ +KA ++   M      +      F R ++    +P+V
Sbjct: 321 KGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF-RVVDGASNEPNV 379

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y  L+  L    + +E   L+  M   G EPN V Y  LI   C+ GK ++A +V   
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E G  P+ Y+Y  LI    KD RLDLA++ L  M+ + C P++V Y  ++   CK G 
Sbjct: 440 MLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A ++   + + GC PNV +Y  M      SG   + L ++ +M SKG  P+ +TY  
Sbjct: 500 TDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRV 559

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++DEA  LL +M+ T +   V  Y  +I GF   R    S+ +   + E  
Sbjct: 560 LINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISEND 617

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
             P    Y +LI+     G    A+EL   L S    S
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFS 655



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 258/592 (43%), Gaps = 89/592 (15%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C + K  E + +    E  P+T L         + K+I     A  F+E++ F+  M A+
Sbjct: 21  CKSGKWREALSLLEKEEFVPDTVL---------YTKMISGLCEASLFEEAMDFLTRMRAS 71

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            C P+V+    L+     + K  +  R++ ++   G  P    +N+L+  +C++     A
Sbjct: 72  SCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYA 131

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSR------------------------------- 154
            K+L ++   G  P  V YNI+IG +CS                                
Sbjct: 132 YKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNIS 191

Query: 155 ---------GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
                    G  E A+ V  +++     P   TY+ +I       + +KA +L  EM   
Sbjct: 192 NFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN 251

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                           CK G + QA  +   +E  GC P+V++Y  L+   L   K  + 
Sbjct: 252 GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKA 311

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL------------- 295
            ++   M+S+G  PN+VTY+ LI  LC+ GK E A  + +  K++ +             
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVD 371

Query: 296 ----TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
                P+ ++Y  L+   CK  ++  A + L  M  +GC P+ V Y+ ++   CK G  D
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD 431

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+F  + + G  PNV +Y+++   L+       AL ++S+ML     P+ + Y  +I
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+ G  DEA  L+V ME     P V++Y  +I GF K+ R+ + +E+L  M  KGC 
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMH-----AISRDTFKRLNRTF 518
           PN  TY +LI      G   EA +L   +   +     A  R   +  NR F
Sbjct: 552 PNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF 603



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 203/462 (43%), Gaps = 78/462 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +AG  +++  + + M  +GC P+VV  T LI  + + RK +KA  V E++ 
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319

Query: 100 KYG-----------------------------------------------------EPDV 106
             G                                                     EP+V
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F Y AL+ G CKA Q++ A  +L  +   G  P+ V Y+ +I   C  G ++ A +VF  
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +L     P V TY+ LI     + + D A+K+L +M                 G+CK G 
Sbjct: 440 MLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +A++ +  +E +GC P+V++Y  ++      G+ E+  +L+ +M S+G  PN VTY +
Sbjct: 500 TDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRV 559

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C  G  ++A  +L   K+         Y  +I  +    R  +A  +L + IS+ 
Sbjct: 560 LINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF---NREFIASLYLSFEISEN 616

Query: 330 -CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN---TMFSALWSSGDK 385
             +P    Y  ++  F K G  + ALE+ E+LS    P + ++ N   T+   L  +   
Sbjct: 617 DSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFS-PFSAANQNIHITLIENLSLAHKA 675

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
            +A  + ++M+S+G  P+      LI  L R    +EA+ LL
Sbjct: 676 DKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 166/362 (45%), Gaps = 26/362 (7%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + + G+  D  T      SLC  G    A  + +   ++   P  + YT +I        
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMIS------- 50

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G+C+  +  +A  F+  + +  C P+V++Y +LL   LN  K    +++
Sbjct: 51  -----------GLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC- 310
           ++ MI+ G  P+   ++ L+ + CR G    A  +L+   + G  P    Y+ LI   C 
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 311 --KDGR--LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             + G+  LDLA +    M+  G + + VN +      C  G  ++A  +  ++   G  
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+ S+Y+ +   L ++    +A  +  EM   GI PD   Y +LI   C+ G +++A   
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             +ME     P V++Y  +I  + K+R+++++ EV   M  KGC PN  TY  LI+G+  
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 487 GG 488
            G
Sbjct: 340 AG 341



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 175/426 (41%), Gaps = 105/426 (24%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++ K  ++    E M++ GC P++V  T LI    +  K  KA ++ +I++
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354

Query: 100 K------------------YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
           K                    EP+VF Y AL+ G CKA Q++ A  +L  +   G  P+ 
Sbjct: 355 KENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           V Y+ +I   C  G ++ A +VF  +L     P V TY+ LI     + + D A+K+L +
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK G   +A++ +  +E +GC P+V++Y  ++      G+
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK------------- 291
            E+  +L+ +M S+G  PN VTY +LI+  C  G  ++A  +L   K             
Sbjct: 535 VEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRK 594

Query: 292 --------------------EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY------- 324
                               E    P A  Y  LI  + K GRL++A+E  +        
Sbjct: 595 VIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPF 654

Query: 325 ------------------------------MISDGCLPDIVNYNTILAAFCKNGNADQAL 354
                                         MIS G +P++     ++    +    ++AL
Sbjct: 655 SAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEAL 714

Query: 355 EIFEKL 360
           ++ + +
Sbjct: 715 QLLDSI 720



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +L  SG    AL ++ +   +   PD + Y  +IS LC   + +EA+  L  M ++   P
Sbjct: 19  SLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V++Y I++ G     ++     +L+ M  +GC P+   +  L+      G  A A +L 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 498 NALV 501
             +V
Sbjct: 136 KKMV 139


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 209/402 (51%), Gaps = 19/402 (4%)

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           E K  KA   +  +E  G +P+V +YN +I G+     IE A ++LD +R +G  PD  T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y  +I  +C  G +E A  +FD+++     P  +TY  LI                   G
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID------------------G 287

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C KG + +AF +   +  +G  P V +YN+L+  L   G+  E + ++ EM  +G+ P+
Sbjct: 288 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +TY+ILI+   R G  + A D+      KG+ P   +Y  LI    +  R+  A +  +
Sbjct: 348 AITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 407

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            ++  G  PD++ +N ++   C NGN ++A  + +++     PP+  ++NT+       G
Sbjct: 408 KILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 467

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  ++ EM  +GI+PD I+YN+LIS   R G + +A  +  +M S  F PT+++YN
Sbjct: 468 KVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYN 527

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            +I   CK +  + + E+L  M  KG  P+++TY+ LIEG+G
Sbjct: 528 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 569



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 142/306 (46%), Gaps = 22/306 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G  + +  + + MV  G  P V     L+   F E +  +A  +++ + K G  PD   Y
Sbjct: 292 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 351

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+ +    + A  + + + S+G  P  VTY  +I  L  R  ++ A  +F+++L 
Sbjct: 352 NILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 411

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P VI +  +I                   G C  G V +AF  ++ ++ +   PD 
Sbjct: 412 QGVSPDVIMFNAMID------------------GHCANGNVERAFMLLKEMDRKSVPPDE 453

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +++N L++     GK EE   L+ EM  RG++P+ ++Y+ LIS   R G  +DA  V   
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDE 513

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G  P   +Y+ LI   CK+   DLA E L  M++ G  PD   Y +++      GN
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GN 570

Query: 350 ADQALE 355
            D  +E
Sbjct: 571 VDTLVE 576



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 99/191 (51%)

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           +G+L  A EF+ +M   G  P++V+YNTI+  +   GN + A  I + +   G  P+  +
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y ++ S +   G    A G+  +M+  G+ P+ +TYN+LI   C  G ++ A     +M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                P+V +YN+++       R+ E+ +++  M +KG  P+  TY +LI G    G   
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 492 EAMELANALVS 502
            A +L N ++S
Sbjct: 366 RAFDLHNEMLS 376



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)

Query: 27  NTHLLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +  +LS  ++ T   +  LI    R  +  E+    E ++  G  PDV+M   +I     
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
                +A  ++ E+  K   PD   +N L+ G C+  ++E A  +LD ++ RG  PD ++
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN +I     RG I+ AF V D++L     PT++TY  LI+      + D A +LL E  
Sbjct: 491 YNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE-- 548

Query: 204 MCKKGMVGQAFQFVRSLESRG 224
           M  KG+      ++  +E  G
Sbjct: 549 MVNKGISPDDSTYLSLIEGMG 569



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%)

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ++  S I     +G + +A   +  ME   F+P V+SYN II G+     I  +  +L
Sbjct: 172 DRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 231

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            AM  KG +P+  TY  LI G+   G   EA  L + +V +
Sbjct: 232 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 272


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 231/446 (51%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+++      MV +   P +V  T+L+      R+    +   + +E YG   D++++ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI  FC+ +++  A  VL ++   G+ P +VT+  ++   C    I  AF +   +++ 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P V+ Y  LI                   G+CK G +  A + +  +E +G   DV+
Sbjct: 171 GYEPNVVVYNTLID------------------GLCKNGELNIALELLNEMEKKGLGADVV 212

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN LL  L   G+W +  +++ +M+ R + P+VVT++ LI    + G  ++A ++ +  
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            +  + P+  +Y+ +I+  C  GRL  A +  D M S GC P++V YNT+++ FCK    
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+ +++F+++S  G   ++ +YNT+       G    AL +   M+S+ + PD IT+  L
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +  LC +G ++ A+    DM  +     +++YNI+I G CK  ++ ++ E+   +  +G 
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           KP+  TY ++I G+   G R EA EL
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADEL 478



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 236/462 (51%), Gaps = 19/462 (4%)

Query: 36   KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
                + + ++      KFD++      M+ +   P +V  T+++    +  K +  + + 
Sbjct: 568  HHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY 627

Query: 96   EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
              +E  G   D++++  LI  FC+ +++ LA  +L ++   GF P +VT   ++   C  
Sbjct: 628  HKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG 687

Query: 155  GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
               + A  + D +      P V+ Y  +I                   G+CK   +  A 
Sbjct: 688  NRFQEAVSLVDSMDGFGFVPNVVIYNTVIN------------------GLCKNRDLNNAL 729

Query: 215  QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            +    +E +G + D ++YN L+  L N G+W +  +L+ +M+ R ++PNV+ ++ LI + 
Sbjct: 730  EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789

Query: 275  CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
             ++G   +A ++ +    + + P+ ++Y+ LI+ +C  G L  A    D M+S GC PD+
Sbjct: 790  VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849

Query: 335  VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            V YNT++  FCK+   +  +++F +++  G   +  +YNT+      +G    A  + + 
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 395  MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
            M+  G+ PD +TYN L+ CLC +G +++A+ ++ D++ +     +I+YNIII G C+T +
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 455  INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + E+  +  ++  KG KP+   Y+ +I G+   G + EA +L
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 216/456 (47%), Gaps = 26/456 (5%)

Query: 23   ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
            ++RP   ++ F    T+ + +I +     KFD  +Y    M   G   D+   T LI  F
Sbjct: 597  QSRPIPSIVDF----TRVLTVIAK---MNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 649

Query: 83   FQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
             +  + + A+ ++  + K G  P +    +L++GFC+ N+ + A  ++D +   GF P+V
Sbjct: 650  CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 709

Query: 142  VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            V YN +I  LC    + +A +VF  + +   +   +TY  LI                  
Sbjct: 710  VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS----------------- 752

Query: 202  MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             G+   G    A + +R +  R   P+VI +  L+ T +  G   E   L  EMI R + 
Sbjct: 753  -GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            PNV TY+ LI+  C  G   DA  +      KG  PD  +Y+ LI+ +CK  R++  ++ 
Sbjct: 812  PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 322  LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
               M   G + D   YNT++  +C+ G  + A ++F ++ D G  P++ +YN +   L +
Sbjct: 872  FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931

Query: 382  SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            +G   +AL M+ ++    ++ D ITYN +I  LCR   + EA  L   +     +P  I+
Sbjct: 932  NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 991

Query: 442  YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            Y  +I G C+     E+ ++   M E G  P+E  Y
Sbjct: 992  YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 194/393 (49%), Gaps = 19/393 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R  +   +L  +  M+  G +P +V    L+  F    +   A  ++ ++ 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP+V  YN LI G CK  ++ +A ++L+ +  +G   DVVTYN ++  LC  G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   +++ +  P V+T+T LI   + +G  D+A +L  EM              ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--------------IQ 274

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S       P+ ++YN ++  L   G+  + +K    M S+G  PNVVTY+ LIS  C+  
Sbjct: 275 S----SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++ + + +    +G   D ++Y+ LI  YC+ G+L +A++   +M+S    PDI+ + 
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   C NG  + AL  F+ + +      + +YN M   L  +    +A  +   +  +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           G++PD  TY  +I  LC++G   EA  L+  M+
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMK 483



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 18/364 (4%)

Query: 63   MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
            M+  G +P +V    L+  F Q  +  +AV +++ ++ +G  P+V  YN +I+G CK   
Sbjct: 665  MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 122  IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
            +  A +V   +  +G   D VTYN +I  L + G    A ++   +++    P VI +T 
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784

Query: 182  LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
            LI   + EG   +A  L  EM                 G C  G +G A      + S+G
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 225  CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            C PDV++YN L+       + E+G KL  EM  +GL  +  TY+ LI   C+ GK   A 
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 285  DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
             V     + G++PD  +Y+ L+   C +G+++ A+  ++ +       DI+ YN I+   
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 345  CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            C+     +A  +F  L+  G  P+  +Y TM S L   G +  A  +   M   G  P E
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 405  ITYN 408
              Y+
Sbjct: 1025 RIYD 1028



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 237/567 (41%), Gaps = 96/567 (16%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S D     +  +I      G+  ++    + M + GC P+VV    LI  F + R  ++ 
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT------- 143
           +++ + +   G   D+F YN LI G+C+  ++ +A  +   + SR  +PD++T       
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 144 ----------------------------YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
                                       YNIMI  LC    +E A+++F +L  +  KP 
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455

Query: 176 VITYTILIQATMLEG---QTDKAMKLLDEMGM-CK------------------------- 206
             TYTI+I      G   + D+ ++ + E G+ C+                         
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREI 515

Query: 207 -----------KGMVGQAFQ-----FVRS---LESRGCQPDV------------ISYNML 235
                      + ++  AF      FVR    L  RG  P+               Y   
Sbjct: 516 WERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRER 575

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           LR  L+  K+++   L  EM+     P++V ++ +++ + +  K +  + +    +  G+
Sbjct: 576 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 635

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           + D YS+  LI  +C+  RL LA+  L  M+  G  P IV   ++L  FC+     +A+ 
Sbjct: 636 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 695

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + + +   G  PNV  YNT+ + L  + D   AL +   M  KGI  D +TYN+LIS L 
Sbjct: 696 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 755

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G   +A  LL DM   +  P VI +  +I  F K   + E+  +   M  +   PN  
Sbjct: 756 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
           TY  LI G    G   +A  + + +VS
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVS 842



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 160/346 (46%), Gaps = 18/346 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            E AF +F +++     P+++ +T L+ AT    + +  +                   F
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI------------------YF 93

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +E  G   D+ S+ +L+       +      ++ +M+  G EP++VT+  L+   C 
Sbjct: 94  SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  DA  ++    + G  P+   Y+ LI   CK+G L++A+E L+ M   G   D+V 
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT+L   C +G    A  +   +      P+V ++  +       G+   A  +  EM+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              ++P+ +TYNS+I+ LC  G + +A      M S    P V++YN +I GFCK R ++
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E +++   M  +G   +  TY  LI G    G    A+++   +VS
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 157/345 (45%), Gaps = 18/345 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            + AF +F ++L+    P+++ +T ++       + D  + L  +M              
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-------------- 630

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               E+ G   D+ S+ +L+       +      L+ +M+  G  P++VT   L++  C+
Sbjct: 631 ----ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ 686

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + ++AV ++ +    G  P+   Y+ +I+  CK+  L+ A+E    M   G   D V 
Sbjct: 687 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 746

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT+++    +G    A  +   +      PNV  +  +       G+ + A  +  EM+
Sbjct: 747 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 806

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            + + P+  TYNSLI+  C  G + +A  +   M S    P V++YN +I GFCK++R+ 
Sbjct: 807 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 866

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + +++   M  +G   +  TY  LI G    G    A ++ N +V
Sbjct: 867 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 911



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 232 YNMLLRT-LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           Y   LRT  L+  ++E+   L  EM+     P++V ++ L+++     + E  +   +  
Sbjct: 38  YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D YS+  LI  +C+  RL  A+  L  M+  G  P IV + ++L  FC     
Sbjct: 98  ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             A  +   +   G  PNV  YNT+   L  +G+   AL +++EM  KG+  D +TYN+L
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC  G   +A  +L DM      P V+++  +I  F K   ++E+ E+   M +   
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            PN  TY  +I G+   G   +A +  + + S
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)

Query: 51   GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
            G   ++ Y  + MV+ GC PDVV    LI  F + ++    +++  E+  +    D F Y
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 110  NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            N LI G+C+A ++ +A KV +R+   G SPD+VTYNI++  LC+ G IE A  + + L +
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947

Query: 170  DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                  +ITY I+IQ      +  +A  L   +                 G+C+KG+  +
Sbjct: 948  SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 1007

Query: 213  AFQFVRSLESRGCQPDVISYNMLLR 237
            A +  R ++  G  P    Y+  LR
Sbjct: 1008 ADKLCRRMKEDGFMPSERIYDETLR 1032


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 239/478 (50%), Gaps = 19/478 (3%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEK 100
             + + F++ +F ++ +F   +  +  K + +  +     F      + AV +   +L +
Sbjct: 21  HFVPKKFQSFQFLKNTHF-NFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRR 79

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P  F +N ++    K+        +  ++  RG  P++V  NI+I   C  G+I  A
Sbjct: 80  NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFA 139

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           F VF ++L+    P  IT+T L +   L+GQ  +A    D++                 G
Sbjct: 140 FSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHG 199

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G    A   ++ ++    QP+V+ YN ++ ++  +    E   L +EM+S+G+ P+
Sbjct: 200 LCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPD 259

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           VVTYS LIS  C  GK +DA+D+      + + PD Y+++ L++A+CKDG++       D
Sbjct: 260 VVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+  G  P+ V YN+++  +C     ++A  IF  ++  G  P++ SY+ M +      
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A+ +  EM  K I PD +TY+SLI  L + G +  A+ L+  M      P + +YN
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYN 439

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            I+   CKT +++++I +L    +KG +P+ +TY +LI+G+   G   +A ++   L+
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 233/463 (50%), Gaps = 19/463 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    ++  +   LY  + M   G KP++V C  LI  F Q      A  V   +
Sbjct: 87  EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146

Query: 99  EKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G  PD   +  L  G C   QI+ A    D++ + GF  D ++Y  +I  LC  G  
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A  +  ++  +  +P V+ Y  +I +                  MCK  +V +AF   
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDS------------------MCKVKLVNEAFDLF 248

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+G  PDV++Y+ L+     +GK ++   L  +MI   ++P+V T++IL+++ C+D
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++   V     ++G+ P+  +Y+ L+  YC    ++ A    + M   G  PDI +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++  FCK    D+A+ +F+++      P+V +Y+++   L  SG    AL ++ +M  
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G+ P+  TYNS++  LC+   VD+A+ LL   +   F+P + +Y+I+I G C++ ++ +
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +V   +  KG   +   Y ++I+G    G   EA+ L + +
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 207/424 (48%), Gaps = 19/424 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAY 109
           G+  ++  F + +VA G   D +    LI    +  ++  A+ +++ ++    +P+V  Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   CK   +  A  +   + S+G SPDVVTY+ +I   C  G ++ A  +F++++ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           +N KP V T+ IL+ A                   CK G + +       +  +G +P+ 
Sbjct: 289 ENIKPDVYTFNILVNA------------------FCKDGKMKEGKTVFDMMMKQGIKPNF 330

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+     + +  + + +   M   G+ P++ +YSI+I+  C+  K ++A+++ + 
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K + PD  +Y  LI    K GR+  A++ +D M   G  P+I  YN+IL A CK   
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+ +  K  D G  P++S+Y+ +   L  SG    A  +  ++L KG   D   Y  
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C +G+ +EA+ LL  ME     P   +Y IIIL   K    + + ++L  M  +G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570

Query: 470 CKPN 473
              N
Sbjct: 571 LPLN 574



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 53/303 (17%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK  +++     M+    KPDV     L+  F ++ K  +   V +++ K G +P+   Y
Sbjct: 274 GKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+L+ G+C   ++  A  + + +   G +PD+ +Y+IMI   C     + A  +F ++ R
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P V+TY+ LI      G+   A++L+D+M                  +CK   V +
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK 453

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE----------- 261
           A   +   + +G QPD+ +Y++L++ L   GK E+  K+  +++ +G             
Sbjct: 454 AIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513

Query: 262 ------------------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                                   P+  TY I+I SL +  + + A  +LR    +GL  
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPL 573

Query: 298 DAY 300
           + Y
Sbjct: 574 NFY 576



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 62/136 (45%)

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  SY++  +   S+ D   A+ + + +L +   P    +N ++  L +       + L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             ME    +P +++ NI+I  FC+   I  +  V A + + G  P+  T+  L +G+   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 488 GWRAEAMELANALVSM 503
           G   +A    + +V++
Sbjct: 169 GQIQQAFLFHDKVVAL 184


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 53/496 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  +I   F+ G+ D++ +  + M+  G  PDVV  + LI    + +  NKA  +++ + 
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+   YN +I G+C   Q+E A ++L ++   G  PDVVTY ++I   C  G   
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VFD ++R   KP    Y IL+     +G       LLD M                
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K G V +A      +   G +PDV+SY+ ++  L  +G+ E+      +M+S GL 
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+++++ LI  LC  G+ +   ++      +G+ PDA   + ++   CK+GR+  A +F
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D +I  G  P++V+YNT++  +C  G  D++++ F+++  +G  P+  +YN + +  + 
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 382 SGDKIRALGMISEMLSKGIEPDEI-----------------------------------T 406
           +G    AL +  EM  K ++   I                                   T
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIET 625

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+++  LC +  VDEA+ +  D+ S  F   V ++NI+I    K  RI+E+  + +AM 
Sbjct: 626 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685

Query: 467 EKGCKPNETTYVLLIE 482
            +G  P+  TY L+I+
Sbjct: 686 LRGPVPHVITYSLMIK 701



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 230/468 (49%), Gaps = 22/468 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYG-EPDVFA 108
           G+ D +       +  G +   V   +LIK     ++++ A+  V   + + G  PDVF+
Sbjct: 108 GRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFS 167

Query: 109 YNALISGFCKANQIELANKVLDRLRSRG---FSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           YNALI G C   + + A ++L  + + G    SP+VV+Y+ +I      G ++ A+ +FD
Sbjct: 168 YNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFD 227

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           +++     P V+TY+ LI         +KA  +L  M                 G C  G
Sbjct: 228 EMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLG 287

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A + ++ +   G QPDV++Y +L++    +G+  E   +   M+ +G +PN   Y 
Sbjct: 288 QLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           IL+      G   D  D+L      G+  +  +++ LI AY K G +D A+     M  +
Sbjct: 348 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 407

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD+V+Y+T++   CK G  + A+  F ++   G  PN+ S+ ++   L S G+  + 
Sbjct: 408 GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 467

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM+++GI PD I  N+++  LC++G V EA      +     +P V+SYN +I G
Sbjct: 468 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +C   +++ESI+    M   G +P+  TY  L+ G    G   +A+ L
Sbjct: 528 YCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALAL 575



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 10/292 (3%)

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD-VLRAAKE 292
           +L+R    +G+ +         +  G     VT + LI  LC   +T+DA+D V R   E
Sbjct: 99  ILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPE 158

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG---CLPDIVNYNTILAAFCKNGN 349
            G TPD +SY+ LI   C + +   A+E L +M +DG   C P++V+Y+TI+  F K G 
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  +F+++   G PP+V +Y+++   L  +    +A  ++  M  KG+ P+  TYN 
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C  G ++EAV LL  M  +  +P V++Y ++I  +CK  R  E+  V  +M  KG
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
            KPN T Y +L+ G    G   +  +L + ++      RD     +R F +L
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMI------RDGIPFEHRAFNIL 384



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 49/305 (16%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED-------AVDVLRAAKEKG---L 295
           E+   L  E++ +    +V  ++ +++ + R   +         AV +       G   +
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEF---------------LDYMISDGC---------- 330
             + Y    LI  +C  GRLDLA                  L+ +I   C          
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 331 -----------LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG---CPPNVSSYNTMF 376
                       PD+ +YN ++   C    + +ALE+   ++  G   C PNV SY+T+ 
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
              +  G+  +A  +  EM+ +G  PD +TY+SLI  LC+   +++A  +L  M      
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P   +YNI+I G+C   ++ E++ +L  M   G +P+  TY+LLI+     G  AEA  +
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 497 ANALV 501
            +++V
Sbjct: 331 FDSMV 335


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 226/487 (46%), Gaps = 30/487 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E         F      +  +I    +AG   E+L  +++M+A  C P  V   
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+    +     +A  +  ++   G  P+   Y +LI GF K+ +++ A  + D +   
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ PDV+T+ +MI  LC  G  E A K F++++R  CKP V+TYT +IQ           
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ----------- 408

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ K G V  AF+ ++ + + GC PD ++Y  LL     +G+ +E  +L+ E+
Sbjct: 409 -------GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP-----LISAYC 310
                 PN+  YS L+  LC  G  E+ +D L    +      A + DP     +I   C
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA----AENLDPGLCCSIIVGLC 517

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN--GNADQALEIFEKLSDVGCPPN 368
           K GRLD A      M+S+GC PD   YN ++   C++     ++A  +   L  VG  P+
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +Y  +   L   G+  RA+ M+ E  S+G   D + Y +L + LC  G VD AV L  
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M      P   +Y  II G  K +++ ++ +    M  KG KP   TY  L++ + + G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 489 WRAEAME 495
              EA  
Sbjct: 698 NVDEAFH 704



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 227/485 (46%), Gaps = 58/485 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F+ L+    +AG  +++      M+A G   PD  + T +++   + ++  +A  V   +
Sbjct: 192 FLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM 251

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           EK G  PD  AYN +I G  KA   + A KVLD + ++   P  VTY I++ SLC  G +
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A ++F  +     +P  + YT LI      G+  +A  L DEM               
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM--------------- 356

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +E+ G +PDVI++ +++  L   G +E+  K   EM+  G +PNVVTY+ +I  L + 
Sbjct: 357 --VEA-GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  +A  +++     G  PD+ +Y  L+  +CK GRLD A + LD +      P++  Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473

Query: 338 NT------------------------------------ILAAFCKNGNADQALEIFEKLS 361
           ++                                    I+   CK G  D+A  IF+++ 
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKI--RALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
             GC P+ ++YN + + L  S +    RA  ++ ++   G  PD +TY  L   LC+ G 
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD AV +L +  S  +   V++Y  +  G C   +++ ++ +   M  +G  P+   Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 480 LIEGI 484
           +I G+
Sbjct: 654 IINGL 658



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 210/455 (46%), Gaps = 54/455 (11%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G + DV     L+     E+  ++   + E + K G  P+ F++N LI  F +  + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
               + ++ +   PD+ T+ I++  LC  GM E AF+VF +++     P           
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP---------- 223

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                  D+A+       + K   V +A +    +E  G  PD I+YN ++  L   G  
Sbjct: 224 -------DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +E  K++  M+++   P  VTY IL++SLC+ G  E A ++ R     G  P++  Y  L
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  + K GR+  A    D M+  G  PD++ +  ++   CK+GN +QA + FE++   GC
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            PNV +Y T+   L   G    A  ++  M++ G  PD +TY  L+   C+ G +DEA  
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQ 456

Query: 426 LLVDMESTRFRPTVISYN------------------------------------IIILGF 449
           LL +++     P +  Y+                                     II+G 
Sbjct: 457 LLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGL 516

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           CKT R++E+  +   M  +GCKP+ TTY +LI G+
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 222/505 (43%), Gaps = 57/505 (11%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  L+    +AG  + +      M A+G +P+ V+ T LI  F +  +  +A  +  
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++E    PDV  +  +I G CK+   E A K  + +   G  P+VVTY  +I  L   G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            + +AF++   ++   C P  +TY  L+      G+ D+A +LLDE+             
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 203 ----------------------------------------GMCKKGMVGQAFQFVRSLES 222
                                                   G+CK G + +A +  + + S
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 223 RGCQPDVISYNMLLRTLLNM--GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            GC+PD  +YN+L+  L      + E    L+ ++   G  P+ VTY+ L   LC+ G+ 
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEV 594

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + AV +L  A  +G   D  +Y  L +  C  G++D A+     M+  G  PD   Y  I
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG- 399
           +    K    + A + F+++   G  P V++Y  +  AL  +G+   A      ML++G 
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGE 714

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +    + Y++LI   C+   VD A+ L  DM S    PT ++   +  G  ++ +  ++ 
Sbjct: 715 LVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI 484
           E+L  M   G  P+  T+  +++G+
Sbjct: 775 ELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 208/454 (45%), Gaps = 61/454 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G F+++    E M+  GCKP+VV  T +I+   +  +   A R+M+ +  +G  PD  
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES-------- 159
            Y  L+ GFCK  +++ A ++LD L     SP++  Y+ ++  LC  G +E+        
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496

Query: 160 ----------------------------AFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
                                       A ++F +++ + CKP   TY ILI        
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN------- 549

Query: 192 TDKAMKLLDEMGMCK--KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                      G+C+  +  V +AF  +  LE  G  PD ++Y  L   L  +G+ +   
Sbjct: 550 -----------GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           K++ E  SRG   +VV Y+ L + LC  G+ + AV + +    +G  PDA +Y  +I+  
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPN 368
            K  +L+ A +F D MI  G  P +  Y  ++ A C  GN D+A   FE +   G    +
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V  Y+ +      +     AL +  +M+S+G  P  +T  SL   L R G  ++A  LL 
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +M +    P   ++  I+ G    R+ +ES ++L
Sbjct: 779 EMAAGGSPPHAATFTAILDGL---RKSDESGKLL 809



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 2/282 (0%)

Query: 209 MVGQAFQFVR-SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           + G A  F R + E  G Q DV +YN L+  L+    + +   +  EM+  G+ PN  ++
Sbjct: 98  VTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSF 157

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +ILI S  R  + +DAV      K K   PD +++  L+   CK G  + A E    M++
Sbjct: 158 NILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217

Query: 328 DGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            G + PD   +  ++    K     +A E+F ++   G PP+  +YNTM   L  +G   
Sbjct: 218 MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQ 277

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL ++  ML+K   P E+TY  L++ LC+ G ++ A  L   M ++ FRP  + Y  +I
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            GF K+ R+ E+  +   M E G +P+  T+ ++I+G+   G
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%)

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G + D  TYN L++ L  +    +   +  +M      P   S+NI+I  F +TRR +++
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +     M  K CKP+  T+++L++ +   G   +A E+ + +++M  +  D
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 210/403 (52%), Gaps = 19/403 (4%)

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +E K  KA   +  +E  G +P+V +YN +I G+     IE A ++LD +R +G  PD  
Sbjct: 261 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TY  +I  +C  G +E A  +FD+++     P  +TY  LI                   
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID------------------ 362

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C KG + +AF +   +  +G  P V +YN+L+  L   G+  E + ++ EM  +G+ P
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 422

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + +TY+ILI+   R G  + A D+      KG+ P   +Y  LI    +  R+  A +  
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + ++  G  PD++ +N ++   C NGN ++A  + +++     PP+  ++NT+       
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  ++ EM  +GI+PD I+YN+LIS   R G + +A  +  +M S  F PT+++Y
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           N +I   CK +  + + E+L  M  KG  P+++TY+ LIEG+G
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 139/255 (54%)

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V ++N+++  L   GK ++  + +  M   G +PNVV+Y+ +I      G  E A  +L 
Sbjct: 249 VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 308

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A + KG+ PD+Y+Y  LIS  CK+GRL+ A    D M+  G +P+ V YNT++  +C  G
Sbjct: 309 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 368

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + ++A    +++   G  P+VS+YN +  AL+  G    A  MI EM  KGI PD ITYN
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+   R G   +A  L  +M S    PT ++Y  +I    +  R+ E+ ++   + ++
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488

Query: 469 GCKPNETTYVLLIEG 483
           G  P+   +  +++G
Sbjct: 489 GVSPDVIMFNAMVDG 503



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 5/201 (2%)

Query: 27  NTHLLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +  +LS  ++ T   +  LI    R  +  E+    E ++  G  PDV+M   ++     
Sbjct: 447 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCA 506

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
                +A  ++ E+  K   PD   +N L+ G C+  ++E A  +LD ++ RG  PD ++
Sbjct: 507 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 566

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN +I     RG I+ AF+V D++L     PT++TY  LI+      + D A +LL E  
Sbjct: 567 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE-- 624

Query: 204 MCKKGMVGQAFQFVRSLESRG 224
           M  KG+      ++  +E  G
Sbjct: 625 MVNKGISPDDSTYLSLIEGMG 645



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           ++ ++   C+   AD+A + F  + + G  P + + N M S          A  + +EM 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              I     T+N +++ LC++G + +A   +  ME   F+P V+SYN II G+     I 
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +  +L AM  KG +P+  TY  LI G+   G   EA  L + +V +
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 91/208 (43%)

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R     +  D L  ++++     +  +D L+   C+  R D A +    M   G +P I 
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             N +L+ F K    + A  ++ ++  +     V ++N M + L   G   +A   I  M
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 275

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              G +P+ ++YN++I      G ++ A  +L  M      P   +Y  +I G CK  R+
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 335

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  +   M E G  PN  TY  LI+G
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDG 363


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 230/463 (49%), Gaps = 25/463 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME- 96
           + F  L+    +   + +  Y    M  +G  PD      L+       +  + + VM  
Sbjct: 97  SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAG 156

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +   PD+  Y  LI G C  ++I  A  +  R++  G +P+ +TY  ++  LC  G 
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 157 IESAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           I  A K+  ++L D      N KP VI+Y+I+I A   + + D+A  L +EM        
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEM-------- 268

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                     + +G  P VISY  L+      GKWEE ++L  EM+++G++PNVVT+++L
Sbjct: 269 ----------KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC++GK  +A D+L    ++G+ P+  +Y+ LI  +C  G L+ A E    M S GC
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD++ Y  ++  +CK    ++A++++  +  VG  P+V +Y  + + L+  G    A  
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   GI  D   Y   ++ LC++G + EA+ L   ++S   +  +  +N +I G C
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 498

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  ++  + E+   + ++  +P+  TY ++I     GG   +A
Sbjct: 499 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 43/342 (12%)

Query: 205 CKKGMVG--QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK G +   QAFQF   +      P + S+  LL  L  +  + +   L  +M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +  T +IL++ LC   +  + + V+     +G  PD  +Y  LI   C + R+  A    
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGN--------------------------------- 349
             M   GC P+ + Y T++   C+ GN                                 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 350 --------ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
                    D+A ++FE++   G  P V SY ++       G    A  + +EM+++G++
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ +T+N LI  LC++G V EA  LL  M      P +++YN +I GFC    +N + E+
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +M  KGC+P+   Y +LI G        EAM+L N ++ +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 7/238 (2%)

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           T   V    +  +  L+   +++ P I +   +     A+      +S       +++  
Sbjct: 4   TSKTVPSASSIVKPNLSSSLFTHSPTIPS--SNPHFSSAVHHKSLNVSPQNFNTPISFQQ 61

Query: 340 ILAAF---CKNGN--ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            L+ F   CK GN  A QA + F  +      P +SS+  + S L       +   + ++
Sbjct: 62  QLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQ 121

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   GI PD  T N L++CLC    V E + ++  +    + P +++Y  +I G C   R
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
           I+++  +   M + GC PN  TY  L++G+   G  + A++L   +++  ++    FK
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK 239


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 245/506 (48%), Gaps = 58/506 (11%)

Query: 31  LSFDVKE-TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           LSF V+    + ++++    + +F+E+L     MV +   P ++  T+L+    + +K +
Sbjct: 29  LSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFD 88

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
             + + + L+  G   D++  N L++ FC+++Q  LA+  L +L   GF PD+ T+  +I
Sbjct: 89  VVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLI 148

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
              C    IE A  + +Q++    KP V+ YT +I +                  +CK G
Sbjct: 149 NGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDS------------------LCKNG 190

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V  A      +E+ G +PDV+ Y  L+  L N G+W + + L+  M+ R ++P+V+T++
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI +  ++GK  DA ++     +  + P+ ++Y  LI+  C +GRLD A +    M + 
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC PD+V Y +++  FCK    + A++IF ++S  G   N  +Y T+       G    A
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR---PTVISYNII 445
             +   M+S+G+ P+  TYN L+ CLC +G V++A+ +  DM+        P + +YN++
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430

Query: 446 ILGF-----------------------------------CKTRRINESIEVLAAMFEKGC 470
           + G                                    CK  ++ +++ +  ++  KG 
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGV 490

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           KPN  TY  +I G+   G   EA  L
Sbjct: 491 KPNVVTYTTMISGLFREGLMLEAHVL 516



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 204/473 (43%), Gaps = 98/473 (20%)

Query: 19  SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKL 78
           S   E+RP   ++ F    T+ + +I +     KFD  +   + +   G   D+  C  L
Sbjct: 60  SHMVESRPLPSIIDF----TRLLNVIAK---MKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           +  F Q  +   A   +  L K G EPD+F + +LI+GFC  N+IE A  +++++   G 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQL------------------------------ 167
            PDVV Y  +I SLC  G +++A  +F+Q+                              
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 168 -----LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
                ++   KP VIT+  LI A + EG+   A +L +EM                 G+C
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G + +A Q    +E++GC PDV++Y  L+       K E+  K+  EM  +GL  N +
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI      GK   A +V      +G+ P+  +Y+ L+   C +G+++ A+   + M
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 326 IS---DGCLPDIVNYNTILAAFCKNGNADQALEIFE------------------------ 358
                DG  P+I  YN +L   C NG  ++AL +F                         
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 359 -KLSDV----------GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
            K+ D           G  PNV +Y TM S L+  G  + A  +  +M   G+
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 149/318 (46%), Gaps = 38/318 (11%)

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           AM+ L       KG  G+A  F R L          +Y  +LR  L+  ++ E   L + 
Sbjct: 2   AMRFLHLHRDLVKGNSGKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSH 61

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+     P+++ ++ L++ + +  K +  +++ +  +  G++ D Y+ + L++ +C+  +
Sbjct: 62  MVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQ 121

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
             LA  FL  ++  G  PDI  + +++  FC                             
Sbjct: 122 PCLASSFLGKLMKLGFEPDIFTFTSLINGFC----------------------------- 152

Query: 375 MFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
                   G++I  A+ M+++M+  GI+PD + Y ++I  LC++G VD A+ L   ME+ 
Sbjct: 153 -------LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENY 205

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             RP V+ Y  ++ G C + R  ++  +L  M ++  KP+  T+  LI+     G   +A
Sbjct: 206 GIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDA 265

Query: 494 MELANALVSMHAISRDTF 511
            EL N ++ M +I+ + F
Sbjct: 266 KELYNEMIQM-SIAPNIF 282



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 21/278 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK  ++      M+     P++   T LI     E + ++A ++  ++E
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV AY +LI+GFCK  ++E A K+   +  +G + + +TY  +I      G   
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VF  ++     P + TY +L+      G+ +KA+ + ++M                
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+C  G + +A      ++ R     +I+Y ++++ +   GK ++   L   + S+
Sbjct: 429 VLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSK 488

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           G++PNVVTY+ +IS L R+G   +A  + R  KE G++
Sbjct: 489 GVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 244/484 (50%), Gaps = 29/484 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +++ + R G F  ++  ++ + A GC  D   C  ++    ++   ++ V ++  L  +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208

Query: 103 -EPDVFAYNALISGFCKANQ--------IELA--NKVLDRLRSRGFSPDVVTYNIMIGSL 151
            EPD+ +YNA++ G C A +        +E+   ++ L ++   G +PD+  Y  +I  +
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGI 268

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G  E A  +  ++     KP V+ Y  +++      + ++A  LL EM         
Sbjct: 269 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM--------- 319

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
             FQ         C  D +++N+L+      G  +   +L+ +M+  G  P+V+TY+ +I
Sbjct: 320 --FQ-------EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 370

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C++G  ++AV +L+     G  P+  SY  ++   C+  R   A E + +MI  GCL
Sbjct: 371 NGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCL 430

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+ V +NT++   CK G A+QA+E+ +++   GC P++ SY+T+   L  +G    AL +
Sbjct: 431 PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 490

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           ++ M++KGI P+ I Y+S+ S L R+G  D+ + +   ++    R     YN +I   CK
Sbjct: 491 LNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
               + +I+  A M   GC PNE+TY +LI G+   G   EA +L + L S  A+ +   
Sbjct: 551 RWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLV 610

Query: 512 KRLN 515
           +   
Sbjct: 611 RHFG 614



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 225/464 (48%), Gaps = 67/464 (14%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           + LI+      ++  A R ++         V AYNA+I+G+C+A Q+  A ++   +   
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAA--GVVAYNAMIAGYCRAGQVAAARRLAAAVP-- 103

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG---QT 192
              P+  TY  ++ SLC+RG+I  A  V D++    C  T     ++++A    G     
Sbjct: 104 -VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 193 DKAMKLLDEMG--------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            +A+++L   G              +C++G V +  + +R L S GC+PD++SYN +L+ 
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 239 LLNMGKWEEGEKLMTEMI----------SRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           L    +W++ E+LM EM+            G  P++  Y+ +I  +C+DG  E A D+L 
Sbjct: 223 LCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 282

Query: 289 AAKEKGLTPDAYSYDP-----------------------------------LISAYCKDG 313
                GL P+   Y+                                    L+  +C++G
Sbjct: 283 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNG 342

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            +D  IE L+ M+  GC+PD++ Y T++  FCK G  D+A+ + + +S  GC PN  SY 
Sbjct: 343 LVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYT 402

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L  +   + A  +IS M+ +G  P+ +T+N+LI+ +C+ G+ ++A+ LL  M   
Sbjct: 403 IVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVN 462

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
              P +ISY+ +I G  K  +  E++E+L  M  KG  PN   Y
Sbjct: 463 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 506



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 223/490 (45%), Gaps = 99/490 (20%)

Query: 44  IKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           I RS  A G   ++L  ++ M   GC     MC  +++   +      AVR +++L   G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 103 ------------------------------------EPDVFAYNA--------------- 111
                                               EPD+ +YNA               
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 112 ------------------------------LISGFCKANQIELANKVLDRLRSRGFSPDV 141
                                         +I G CK    E+AN +L R+ S G  P+V
Sbjct: 234 ELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV 293

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           V YN ++  LCS    E A  +  ++ +++C    +T+ IL+      G  D+ ++LL++
Sbjct: 294 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 353

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G CK+G+V +A   ++++ + GC+P+ ISY ++L+ L    +
Sbjct: 354 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 413

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           W + ++L++ MI +G  PN VT++ LI+ +C+ G  E A+++L+     G +PD  SY  
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYST 473

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I    K G+ + A+E L+ MI+ G  P+ + Y+++ +A  + G  D+ +++F+ + D  
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 533

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              + + YN + S+L    +  RA+   + M+S G  P+E TY  LI  L  +G+V EA 
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593

Query: 425 GLLVDMESTR 434
            LL ++ S R
Sbjct: 594 DLLSELCSRR 603



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 16/303 (5%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C  G    A    R+L++ G    V++YN ++      G+     +L   +    + PN
Sbjct: 54  LCAAGRTADA---ARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPN 107

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY  ++ SLC  G   DA+ VL     +G          ++ A C+ G    A+  L 
Sbjct: 108 AYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQ 167

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL---- 379
            + + GC  D  N N +++A C+ G  D+ +E+  KL   GC P++ SYN +   L    
Sbjct: 168 VLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAK 227

Query: 380 -WSSGDK-----IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            W   ++     +R    +S+M   G  PD   Y ++I  +C+DG  + A  +L  M S 
Sbjct: 228 RWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 287

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P V+ YN ++ G C   R  E+ ++LA MF++ C  ++ T+ +L++     G     
Sbjct: 288 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 347

Query: 494 MEL 496
           +EL
Sbjct: 348 IEL 350



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  ++++  ++ M+ NGC PD++  + +I    +  K+ +A+ ++ ++ 
Sbjct: 436 FNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 495

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+++ S   +  + +   ++ D ++      D   YN +I SLC R   +
Sbjct: 496 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETD 555

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            A   F  ++ + C P   TYTILI+    EG   +A  LL E+
Sbjct: 556 RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 6/165 (3%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++ + C  G    A    +   D      V +YN M +    +G   +         +
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAG---QVAAARRLAAA 101

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             + P+  TY  ++  LC  G++ +A+ +L +M       T    ++I+   C+      
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  L  +  KGC  +     L++  I   G   E +EL   L S
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 246/509 (48%), Gaps = 28/509 (5%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP- 104
           +S      D++L     M+     P +V  +KL+    + +  +  + + + ++ +G P 
Sbjct: 28  KSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH 87

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           + +  N LI+ FC  N++  A  VL  +   G+ P   T+  +I  LC  G I  A ++F
Sbjct: 88  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D++  +  +P V+TY  LI      G T  A++ L  M                  +CK 
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             + +A      + ++G  P+  +Y+ L+  L  +G W+E  +L   MI R + P+ +T+
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L+ +LC++G    A  V+    +  L PD  +Y+ L+  +C    +   +   D M+ 
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC+P +++Y T++  +CK    D+A+ +FE++S  G  P+  +YNT+   L   G    
Sbjct: 328 KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +  EM+  G  PD +TY  L   LC++  + EA+ LL  +E T   P +  Y+I++ 
Sbjct: 388 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL------- 500
           G C+   +  + ++ + +  KG  P+  TY ++I G+   G  AEA +L   +       
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507

Query: 501 --VSMHAISRDTFKRLNRTFPLLDVYKEI 527
              + + I+R  F R N T   + +++E+
Sbjct: 508 NACTYNLITRG-FLRNNETLRAIQLFQEM 535



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 213/453 (47%), Gaps = 19/453 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L +      F  LI+     GK  E+L   + M   G +PDV+    LI    +   ++ 
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+R +  +E+    P V  Y+ +I   CK  Q+  A  +   + ++G SP+  TY+ +I 
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G  + A ++F  ++     P  +T+  L+ A                  +CK+GM
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA------------------LCKEGM 279

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A   V  +     +PDV++YN L+       +  +   +   M+ +G  P+V++Y+ 
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTT 339

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C+    + A+ +     ++GL PD  +Y+ LI   C  GRL  AI     M+  G
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +PD+V Y  +    CKN    +A+ + + +      P++  Y+ +   +  +G+   A 
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + S++ SKG+ PD  TY  +I+ LC+ G++ EA  L  +M+     P   +YN+I  GF
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGF 519

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            +      +I++   M  +G   + +T  LL+E
Sbjct: 520 LRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 199/400 (49%), Gaps = 19/400 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + G    ++ F+ SM    C+P VV+ + +I    ++R+  +A+ +  ++L K 
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+ F Y++LI G C     + A ++   +  R   PD +T+N ++ +LC  GM+  A 
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V D +++ + KP V+TY  L+    L  +  K + + D M                 G 
Sbjct: 285 YVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGY 344

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  ++ +A      +  +G  PD ++YN L+  L ++G+  +   L  EM+  G  P++
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 404

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY IL   LC++ +  +A+ +L+  +   L PD + Y  ++   C+ G L+ A +    
Sbjct: 405 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 464

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + S G  PD+  Y  ++   C+ G   +A ++F ++ + GC PN  +YN +      + +
Sbjct: 465 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNE 524

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
            +RA+ +  EMLS+G   D  T   L+  L  DG+ D++V
Sbjct: 525 TLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL-DQSV 563



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 18/245 (7%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKA 119
           ++MV  GC P V+  T LI  + + +  +KA+ + E + + G  PD   YN LI G C  
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            ++  A  +   +   G  PD+VTY I+   LC    +  A  +   +   N  P +  Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
           +I++      G+ + A  L  ++                 G+C++G++ +A +    ++ 
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P+  +YN++ R  L   +     +L  EM+SRG   +V T ++L+  L  DG  + 
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQS 562

Query: 283 AVDVL 287
              +L
Sbjct: 563 VKQIL 567



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 36/195 (18%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      G+  +++     MV  G  PD+V    L     +  +  +A+ +++++E   
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV-------------------- 141
            +PD+  Y+ ++ G C+A ++E A  +  +L S+G  PDV                    
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494

Query: 142 ---------------VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                           TYN++            A ++F ++L       V T T+L++  
Sbjct: 495 KLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554

Query: 187 MLEGQTDKAMKLLDE 201
             +G      ++L E
Sbjct: 555 SDDGLDQSVKQILCE 569



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +      + + G  PDV   T +I    Q+    +A ++   +++ G  P+  
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNAC 510

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  GF + N+   A ++   + SRGFS DV T  +++  L   G+ +S  ++  + 
Sbjct: 511 TYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEF 570

Query: 168 LR 169
           ++
Sbjct: 571 VQ 572


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 228/453 (50%), Gaps = 18/453 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVF 107
           RA   DE++    SMV  G  PD+     LI  F  E++S +A + ++E+++   +P+  
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI GF +   IE A ++ D + + G   +++ +N ++  +C  G +E A ++  ++
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P   TY++LI+         +A +LLDEM                 G+C+ G +
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                 +R +   G +P+ + Y  L+      G+ EE   ++  M  +G+ P+V  Y+ L
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+  + E+A   L    E+ L P+A++Y   I  Y K G +++A  + + M+S G 
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP++  Y  ++   CK GN  +A  +F  +       +V +Y+ +   L  +G    A G
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + SE+  KG+ P+  TYNSLIS  C+ G VD+A  LL +M      P +++YNI+I G C
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K   I  +  +   +  +G  PN  TY  +++G
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 714



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 231/463 (49%), Gaps = 20/463 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           +  L+    + G+ +ES   +E M   G  PDV     LI  F + ++  +A   +ME+L
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   Y A I G+ KA ++E+A++  + + S G  P+V  Y  +I   C  G + 
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF VF  +L       V TY++LI                   G+ + G + +AF    
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIH------------------GLSRNGKMHEAFGIFS 624

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            L+ +G  P+  +YN L+      G  ++  +L+ EM  +G+ P++VTY+ILI  LC+ G
Sbjct: 625 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E A ++    + +GLTP+  +Y  ++  YCK      A + L+ M+  G  PD   YN
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            IL   CK    ++AL++F+++ + G    V S+NT+      SG    A  ++ EM+ K
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEK 803

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ +TY SLI   C+ GM+ EA  L ++M+     PT  +Y  ++ G+     ++E 
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +   M  KG +P++ TY ++I+     G   EA +L + ++
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 906



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 216/443 (48%), Gaps = 19/443 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    R G  +++    + MVA G + ++++   L+    +  K  KA+ +M E++
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EPD   Y+ LI G C+   +  A ++LD ++ R  +P V+TY+++I  LC  G ++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               +  +++ +  KP  + YT L+ A   EG+ +++  +L+ M                
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM---------------- 486

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G  PDV  YN L+       + EE    + EM+ R L PN  TY   I    + G
Sbjct: 487 --REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E A          G+ P+   Y  LI  +CK+G +  A     +++S   L D+  Y+
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 604

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    +NG   +A  IF +L + G  PN  +YN++ S     G+  +A  ++ EM  K
Sbjct: 605 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 664

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI PD +TYN LI  LC+ G ++ A  L  D+E     P  ++Y  ++ G+CK++    +
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724

Query: 459 IEVLAAMFEKGCKPNETTYVLLI 481
            ++L  M  +G  P+   Y +++
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVIL 747



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 222/472 (47%), Gaps = 34/472 (7%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANK 127
           +P ++ C  L+    +  K     +V + +  +   PDV+ Y  +IS  CK   ++ A +
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL  +  +G SP++VTYN++IG LC   +++ A ++   ++     P + TY ILI    
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           +E ++ +A  +L EM                     G +P+ I+YN L+   +  G  E+
Sbjct: 297 MEKRSREAKLMLLEM------------------IDVGLKPEPITYNALIDGFMRQGDIEQ 338

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             ++  EM++ G+E N++ ++ L++ +C+ GK E A+++++   EKG+ PD+ +Y  LI 
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            +C+   +  A E LD M      P ++ Y+ I+   C+ GN      I  ++   G  P
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 458

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N   Y T+ +A    G    +  ++  M  +GI PD   YNSLI   C+   ++EA   L
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 518

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           ++M   R RP   +Y   I G+ K   +  +      M   G  PN   Y  LIEG    
Sbjct: 519 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578

Query: 488 GWRAEAMELANALVS-------------MHAISRDTFKRLNRTFPLLDVYKE 526
           G   EA  +   ++S             +H +SR+   +++  F +    +E
Sbjct: 579 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG--KMHEAFGIFSELQE 628



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 181/349 (51%), Gaps = 18/349 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           RS   SP+ V +++++ S    G +  A  VF        +P++++   L+   +   + 
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
           +   K+ D  GMC   ++                PDV +Y  ++     +G  ++ ++++
Sbjct: 197 ELFWKVFD--GMCAHKVL----------------PDVYTYTNMISAHCKVGNVKDAKRVL 238

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  +G  PN+VTY+++I  LCR    ++A+++ R+  +KGL PD Y+YD LI+ +C +
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 298

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R   A   L  MI  G  P+ + YN ++  F + G+ +QA  I +++   G   N+  +
Sbjct: 299 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 358

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT+ + +  +G   +AL ++ EM+ KG+EPD  TY+ LI   CR   +  A  LL +M+ 
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            +  PTV++Y++II G C+   +  +  +L  M   G KPN   Y  L+
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 35/274 (12%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN V + +L+ S  + G   +AV+V    K     P   S + L+    K  +++L  + 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M +   LPD+  Y  +++A CK GN   A  +  ++ + GC PN+ +YN +   L  
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +     A+ +   M+ KG+ PD  TY+ LI+  C +    EA  +L++M     +P  I+
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 442 YNIIILGF-----------------------------------CKTRRINESIEVLAAMF 466
           YN +I GF                                   CK  ++ +++E++  M 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           EKG +P+  TY LLIEG   G   A A EL + +
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 1/165 (0%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
            +  L+      G   E     E MVA G +PD +    +I  + +E    +A ++  EIL
Sbjct: 847  YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 906

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             K     V AY+ALI   CK  +     K+L+ +   GF   + T +++       G ++
Sbjct: 907  VKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMD 966

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
             A +V   +++        +   L+        ++ +  LL +M 
Sbjct: 967  EAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 230/449 (51%), Gaps = 20/449 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F KL++   + G   E    ++ ++  G  P++      I+   Q  + + AVR++  
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           L + G +PDV  YN LI G CK ++ + A   L ++ + G  PD  TYN +I   C  GM
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A ++    + +   P   TY  LI     EG+T++A+ L +E               
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA-------------- 382

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 +G +P+VI YN L++ L N G   E  +L  EM  +GL P V T++IL++ LC+
Sbjct: 383 ----LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G   DA  +++    KG  PD ++++ LI  Y    +++ A+E LD M+ +G  PD+  
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN++L   CK    +  +E ++ + + GC PN+ ++N +  +L        ALG++ EM 
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRI 455
           +K + PD +T+ +LI   C++G +D A  L   M E+ +   +  +YNIII  F +   +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + ++   M ++   P+  TY L+++G 
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 230/441 (52%), Gaps = 18/441 (4%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           +K + ++ K  +AV V E ++ Y  EP VF+YNA++S    +   + A+KV  R+R RG 
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           +PDV ++ I + S C      +A ++ + +    C+  V+ Y  ++     E    +  +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L  +M                  +CKKG V +  + +  +  RG  P++ +YN+ ++ L 
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ +   +++  +I +G +P+V+TY+ LI  LC++ K ++A   L     +GL PD+Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ LI+ YCK G + LA   +   + +G +PD   Y +++   C  G  ++AL +F + 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  PNV  YNT+   L + G  + A  + +EM  KG+ P+  T+N L++ LC+ G V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            +A GL+  M S  + P + ++NI+I G+    ++  ++E+L  M + G  P+  TY  L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 481 IEGIGYGGWRAEAMELANALV 501
           + G+       + ME    +V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMV 523



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 221/441 (50%), Gaps = 19/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAY 109
           G+ D ++  +  ++  G KPDV+    LI    +  K  +A V + +++ +  EPD + Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+CK   ++LA +++      GF PD  TY  +I  LC  G    A  +F++ L 
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP VI Y  LI+    +G   +A +L +EM                 G+CK G V  
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   V+ + S+G  PD+ ++N+L+       K E   +++  M+  G++P+V TY+ L++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+  K ED ++  +   EKG  P+ ++++ L+ + C+  +LD A+  L+ M +    P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGM 391
           D V + T++  FCKNG+ D A  +F K+ +      +  +YN +  A     +   A  +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM+ + + PD  TY  ++   C+ G V+     L++M    F P++ +   +I   C 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

Query: 452 TRRINESIEVLAAMFEKGCKP 472
             R+ E+  ++  M +KG  P
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVP 705



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 219/436 (50%), Gaps = 19/436 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G FD++      M   G  PDV   T  +K F +  + + A+R++  +   G E +V A
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++ GF + N      ++  ++ + G S  + T+N ++  LC +G ++   K+ D+++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P + TY + IQ                  G+C++G +  A + V  L  +G +PD
Sbjct: 244 KRGVLPNLFTYNLFIQ------------------GLCQRGELDGAVRMVGCLIEQGPKPD 285

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           VI+YN L+  L    K++E E  + +M++ GLEP+  TY+ LI+  C+ G  + A  ++ 
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
            A   G  PD ++Y  LI   C +G  + A+   +  +  G  P+++ YNT++      G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A ++  ++S+ G  P V ++N + + L   G    A G++  M+SKG  PD  T+N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI        ++ A+ +L  M      P V +YN ++ G CKT +  + +E    M EK
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525

Query: 469 GCKPNETTYVLLIEGI 484
           GC PN  T+ +L+E +
Sbjct: 526 GCAPNLFTFNILLESL 541



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 19/313 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G   E+      M   G  P+V     L+    +    + A  +++++   G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+F +N LI G+    ++E A ++LD +   G  PDV TYN ++  LC     E   
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           + +  ++   C P + T+ IL+++     + D+A+ LL+EM                 G 
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 205 CKKGMVGQAFQFVRSLE-SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           CK G +  A+   R +E +        +YN+++            EKL  EM+ R L P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY +++   C+ G        L    E G  P   +   +I+  C + R+  A   + 
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 324 YMISDGCLPDIVN 336
            M+  G +P+ VN
Sbjct: 697 RMVQKGLVPEAVN 709



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           EP   +YN+++S L   G  D+A  + + M      P V S+ I +  FCKT R + ++ 
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTF 518
           +L  M  +GC+ N   Y  ++ G     ++AE  EL    L S  ++   TF +L R  
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 255/553 (46%), Gaps = 56/553 (10%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  +IK   +AGK D     +  +   G +P VV    L+    +  +  +A R+
Sbjct: 219 LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 278

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
              +E+ G  P V  +  LI+G  +  +      VL  +   G SP+ V YN +IG  C 
Sbjct: 279 KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR 338

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKK--- 207
           +G    A ++FD+++    KPT +TY ++ +A   EG+ ++A ++L++M   GM      
Sbjct: 339 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 398

Query: 208 --GMVGQAFQFVRSLES----------RGCQPDVISYNMLLRTLLNMGK-------W--- 245
              +V    Q  R LES          RG +P+       +R L   GK       W   
Sbjct: 399 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 458

Query: 246 -------------------------EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
                                    +E  K++  M+++G+E + +TY+I+I   C+D K 
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+A+ +      +G  PD ++++ L+ AYC  G+++     LD M ++G  PDIV+Y TI
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CK  +  +A E   +L D G  PNV  YN +      +GD   A+  +  M S GI
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P  +TY SL+  +C  G+V+EA  +            VI Y I+I G+CK  ++ E++ 
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 698

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRL-NRTF 518
               M  +G  PN+ TY  L+      G   EA +L + +V    I  + T+  L  R  
Sbjct: 699 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCS 758

Query: 519 PLLDVYKEISHLA 531
            +  + K+I H A
Sbjct: 759 EVNSLDKDIGHTA 771



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 192/409 (46%), Gaps = 35/409 (8%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEG 190
           L SRG  P + T N  + +L   G +++A +VFD++    N      +YT +I+A     
Sbjct: 176 LSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKA----- 230

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                        +CK G V   F+ +  L   G QP V++YN+L+  L   G+ EE  +
Sbjct: 231 -------------LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR 277

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L   M   G+ P+VVT+ ILI+ L R  +  +   VL+  ++ G++P+   Y+ LI  +C
Sbjct: 278 LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHC 337

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G    A+   D M+     P  V YN I  A CK G  ++A  I E +  +G   +  
Sbjct: 338 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCG 397

Query: 371 SYNTMFSALWSSGDKIRALGMIS-EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +NT+ + L     ++ ++  I+ EM+++G+ P++    + +  LC+ G   EAVG+   
Sbjct: 398 LFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFK 457

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
             +      + + N +I G C+ + + E+ +V+  M  KG + +  TY ++I G      
Sbjct: 458 TLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK 517

Query: 490 RAEAMELANALVS-------------MHAISRDTFKRLNRTFPLLDVYK 525
             EA++L   +               +HA       ++  TF LLD  K
Sbjct: 518 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC--NLGKMEETFHLLDQMK 564



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 204/491 (41%), Gaps = 55/491 (11%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L     E  + +LI    R G   ++L   + MV    KP  V    + K   +E +  +
Sbjct: 320 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 379

Query: 91  AVRVMEILEKYG-------------------------------------EPDVFAYNALI 113
           A R++E +   G                                      P+     A +
Sbjct: 380 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 439

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
              CK  + + A  +  +  ++G   ++ T N +I  LC    ++ A KV   +L    +
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIE 499

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
              ITY I+I+                  G CK   + +A +    +  RG +PD+ ++N
Sbjct: 500 LDSITYNIMIR------------------GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFN 541

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            LL    N+GK EE   L+ +M + GL+P++V+Y  +I   C+      A + L    ++
Sbjct: 542 TLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDR 601

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           GL P+ + Y+ LI  Y ++G +  AI+ ++ M S+G  P  V Y +++   C  G  ++A
Sbjct: 602 GLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEA 661

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             IF +  +      V  Y  M       G  + A+    EM S+GI P+++TY +L+  
Sbjct: 662 KTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYA 721

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             + G  +EA  L  +M  +   P  I+Y  +I    +   +++ I   A +       +
Sbjct: 722 YSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKD 781

Query: 474 ETTYVLLIEGI 484
           +  Y +L  GI
Sbjct: 782 DRMYNILSNGI 792



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 10/204 (4%)

Query: 301 SYDPLISAYC---KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           S D LI  +      G L  A +    + S G  P I   N  L A  + G  D A E+F
Sbjct: 149 SSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVF 208

Query: 358 EKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           +++ +      N  SY  M  AL  +G       M++E+   G++P  +TYN L+  LC+
Sbjct: 209 DEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCK 268

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G V+EA  L   ME     P+V+++ I+I G  +  R  E   VL  M + G  PNE  
Sbjct: 269 SGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVI 328

Query: 477 YVLLIEGIGYGGWRAEAMELANAL 500
           Y  LI      GW       + AL
Sbjct: 329 YNELI------GWHCRKGHCSQAL 346



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 7/214 (3%)

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGC 330
            SLCR      A D  R    +G  P   + +  + A  + G+LD A E  D M  S   
Sbjct: 164 GSLCR------AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNV 217

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +  +Y  ++ A CK G  D   E+  +L   G  P V +YN +  AL  SG    A  
Sbjct: 218 ALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR 277

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   G+ P  +T+  LI+ L R     E   +L +ME     P  + YN +I   C
Sbjct: 278 LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHC 337

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +    ++++ +   M  K  KP   TY L+ + +
Sbjct: 338 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 371


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 244/494 (49%), Gaps = 21/494 (4%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF--FQ 84
           N  L++       +  LI    R+G+ D ++ + + M+ +G    V     LI     F 
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           +  + +++  +E+  K  EP    + +LISG+CK  Q++ A K+ +++   G +P+V T+
Sbjct: 450 DLSAAESL-FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTF 508

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
             +I  LCS   +  A ++FD+L+    KPT +TY +LI+    +G+ DKA +LL++M  
Sbjct: 509 TALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQ 568

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+C  G V +A  F+  L  +  + + + Y+ LL      G+  E
Sbjct: 569 KGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLME 628

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
                 EMI RG+  ++V +++LI    +    +   D+L+   ++GL PD   Y  +I 
Sbjct: 629 ALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMID 688

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            Y K+G    A E  D M+++ C P++V Y  ++   CK G  D+A  +F+++     PP
Sbjct: 689 TYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPP 748

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  +Y      L   G+   A+G+   ML KG+  + +T+N +I   C+ G   EA  +L
Sbjct: 749 NSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVL 807

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M      P  ++Y+ +I  +C++  +  S+++   M  +G +P+   Y LLI G    
Sbjct: 808 SEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVN 867

Query: 488 GWRAEAMELANALV 501
           G   +A EL + ++
Sbjct: 868 GELDKAFELRDDML 881



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 26/443 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
           FDES       V  G +PD   C+ +++   + +   +A   +  +E  G +  +  YN 
Sbjct: 213 FDES-------VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNV 265

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI G CK +++  A +V   L  +G + DVVTY  ++   C     E+  ++ D+++   
Sbjct: 266 LIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG 325

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             PT    + L+     +G+ D A +L+ ++G          F FV         P++  
Sbjct: 326 FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG---------RFGFV---------PNLFV 367

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+ +L   G  ++ E L + M    L PN +TYSILI S CR G+ + A+       
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + G+    Y+Y+ LI+  CK G L  A      M + G  P    + ++++ +CK+    
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A +++ K+ D G  PNV ++  + S L S+     A  +  E++ + I+P E+TYN LI
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CRDG +D+A  LL DM      P   +Y  +I G C T R++++ + +  + ++  K
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607

Query: 472 PNETTYVLLIEGIGYGGWRAEAM 494
            NE  Y  L+ G    G   EA+
Sbjct: 608 LNEMCYSALLHGYCQEGRLMEAL 630



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 238/537 (44%), Gaps = 25/537 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RVS + E + +            +  L+    R  +F+  +  ++ MV  G  P     +
Sbjct: 275 RVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+    ++ K + A  ++  + ++G  P++F YNALI+  CK   ++ A  +   +   
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              P+ +TY+I+I S C  G ++ A   FD++++D    TV  Y  LI      G    A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
             L  EM                 G CK   V +AF+    +   G  P+V ++  L+  
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L +  K  E  +L  E++ R ++P  VTY++LI   CRDGK + A ++L    +KGL PD
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            Y+Y PLIS  C  GR+  A +F+D +       + + Y+ +L  +C+ G   +AL    
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASC 634

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++   G   ++  +  +        D+     ++ +M  +G+ PD + Y S+I    ++G
Sbjct: 635 EMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEG 694

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
              +A      M +    P V++Y  ++ G CK   ++ +  +   M      PN  TY 
Sbjct: 695 SFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYG 754

Query: 479 LLIEGIGYGGWRAEAMELANALVS-------MHAISRDTFKRLNRTFPLLDVYKEIS 528
             ++ +   G   EA+ L +A++         H I    F +L R      V  E++
Sbjct: 755 CFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT 811



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 188/419 (44%), Gaps = 54/419 (12%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           T F  LI    +  +  ++      M+ NG  P+V   T LI       K  +A  +  E
Sbjct: 471 TTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDE 530

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E+  +P    YN LI G+C+  +I+ A ++L+ +  +G  PD  TY  +I  LCS G 
Sbjct: 531 LVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGR 590

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ------------------------- 191
           +  A    D L + N K   + Y+ L+     EG+                         
Sbjct: 591 VSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAV 650

Query: 192 -TDKAMK---------LLDEMG-----------------MCKKGMVGQAFQFVRSLESRG 224
             D A+K         LL +M                    K+G   +AF+    + +  
Sbjct: 651 LIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE 710

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P+V++Y  L+  L   G+ +    L   M +  + PN +TY   + +L ++G  ++A+
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
             L  A  KGL  +  +++ +I  +CK GR   A + L  M  +G  PD V Y+T++  +
Sbjct: 771 G-LHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           C++GN   ++++++ + + G  P++ +YN +      +G+  +A  +  +ML +GI PD
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 166/381 (43%), Gaps = 58/381 (15%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI+   R GK D++   +E M   G  PD      LI       + +KA   ++
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFID 599

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQ--------------------------IELANKVL 129
            L K   + +   Y+AL+ G+C+  +                          I+ A K  
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQP 659

Query: 130 DR---------LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           DR         +  +G  PD V Y  MI +    G  + AF+ +D ++ + C P V+TYT
Sbjct: 660 DRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYT 719

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
            L+                   G+CK G + +A    + +++    P+ I+Y   L  L 
Sbjct: 720 ALMN------------------GLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G  +E   L   M+ +GL  N VT++I+I   C+ G+  +A  VL    E G+ PD  
Sbjct: 762 KEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCV 820

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI  YC+ G +  +++  D M++ G  PD+V YN ++   C NG  D+A E+ + +
Sbjct: 821 TYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880

Query: 361 SDVGCPPN---VSSYNTMFSA 378
              G  P+   +    T+F A
Sbjct: 881 LRRGIIPDNKYLQKKGTIFEA 901



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 2/330 (0%)

Query: 160 AFKVFDQL-LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A + F+ L L  N   +  +Y I++ A +       A  LL  + + ++      F    
Sbjct: 86  ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTL-LLRESHPKCVFSHFL 144

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               R      + +N+L++  +   +  +   ++  M +  L P V T S L++ L +  
Sbjct: 145 DSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVR 204

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K     ++   +   G+ PD Y+   ++ + C+      A E + +M ++G    IV YN
Sbjct: 205 KFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYN 264

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   CK     +A+E+   L   G   +V +Y T+             + ++ EM+  
Sbjct: 265 VLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVEL 324

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P E   + L+  L + G +D+A  L+V +    F P +  YN +I   CK   ++++
Sbjct: 325 GFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA 384

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
             + + M     +PN  TY +LI+     G
Sbjct: 385 ELLYSNMSLMNLRPNGITYSILIDSFCRSG 414


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 226/461 (49%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+     P ++   K++  F + +  + AV +   LE  G +PD+   N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI     VL ++  RG+ PD VT N +I  LC +G ++ A    D+LL    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +   ++Y  LI      G T  A+KLL ++                  +CK  +V +A+ 
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +  +G   DV++Y+ L+      GK +E   L+ EM+ + + PNV TY+IL+ +LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++GK ++A  VL    +  + PD  +Y  L+  Y     +  A    + M   G  PD+ 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  ++  FCKN   D+AL +F+++      P + +Y+++   L  SG       +I EM
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G   + ITY+SLI  LC++G +D A+ L   M+    RP   ++ I++ G CK  R+
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++ EV   +  KG   N  TY ++I+G    G   EA+ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 208/419 (49%), Gaps = 18/419 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+       +  ++  G  PD V    LIK    + +  KA+   + L   G + +  +Y
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+G CK      A K+L ++  R   P+VV Y+ +I +LC   ++  A+ +F ++  
Sbjct: 168 GTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                 V+TY+ LI    +EG+  +A+ LL+EM                  +CK+G V +
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +     +PDVI+Y+ L+     + + ++ + +   M   G+ P+V TY+ILI+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C++   ++A+++ +   +K + P   +Y  LI   CK GR+    + +D M   G   
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPA 407

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +++ Y++++   CKNG+ D+A+ +F K+ D G  PN  ++  +   L   G    A  + 
Sbjct: 408 NVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 467

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            ++L+KG   +  TYN +I   C+ G+++EA+ +L  ME     P  +++ III+   K
Sbjct: 468 QDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 180/367 (49%), Gaps = 18/367 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F + +  +  LI    + G    ++  ++ +     KP+VVM + +I    + +  ++A
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             +  E+  K    DV  Y+ LI GFC   +++ A  +L+ +  +  +P+V TYNI++ +
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G ++ A  V   +L+   KP VITY+ L+    L  +  KA  + + M        
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G CK  MV +A    + +  +   P +++Y+ L+  L   G+      L+ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM  RG   NV+TYS LI  LC++G  + A+ +    K++G+ P+ +++  L+   CK G
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           RL  A E    +++ G   ++  YN ++   CK G  ++AL +  K+ D GC P+  ++ 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFE 518

Query: 374 TMFSALW 380
            +  AL+
Sbjct: 519 IIIIALF 525



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 20/272 (7%)

Query: 131  RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
            RL  +G  PD+ T NI+I   C  G I   F +  ++L+    P  IT+T LI       
Sbjct: 951  RLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN------ 1004

Query: 191  QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                        G+C KG V +A  F   L ++G Q + +SY  L+  +  +G      K
Sbjct: 1005 ------------GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 1052

Query: 251  LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
            L+ ++  R  +P+VV Y+ +I +LC+      A  +      KG++ D  +Y+ LI  +C
Sbjct: 1053 LLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112

Query: 311  KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN--ADQALEIFEKLSDVGCPPN 368
              G+L  AI  L+ M+     P++  YN ++ A CK G    D++L +  K+ D GC  N
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKAN 1172

Query: 369  VSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
              ++  + SAL+   +  +   ++ EM+++G+
Sbjct: 1173 AVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 20/303 (6%)

Query: 189  EGQTD----KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN-MG 243
            EG+ D    +A+ +  E G+ + G+         ++  RG    V S    +R   N M 
Sbjct: 894  EGEADLDQVEAIHVGFEHGVVRGGL---------AMAERG----VTSVGAYIRIPHNPMK 940

Query: 244  KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             +     L   +  +G++P++ T +ILI+  C  G+      +L    ++G  PD  ++ 
Sbjct: 941  HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFT 1000

Query: 304  PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             LI+  C  G+++ A+ F D +++ G   + V+Y T++   CK G+   A+++  K+   
Sbjct: 1001 TLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060

Query: 364  GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
               P+V  YNT+  AL       +A G+  EM  KGI  D +TYN+LI   C  G + EA
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 424  VGLLVDMESTRFRPTVISYNIIILGFCKTRR--INESIEVLAAMFEKGCKPNETTYVLLI 481
            +GLL  M      P V +YNI++   CK  +  ++ES+ +L+ M + GCK N  T+ ++I
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180

Query: 482  EGI 484
              +
Sbjct: 1181 SAL 1183



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 21/273 (7%)

Query: 91   AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            AV +   LE  G +PD+F  N LI+ FC   QI     +L ++  RG+ PD +T+  +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 150  SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             LC +G +  A    D+LL    +   ++Y  LI                   G+CK G 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLIN------------------GVCKIGD 1046

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
               A + +R ++ R  +PDV+ YN ++  L       +   L  EM  +G+  +VVTY+ 
Sbjct: 1047 TRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNT 1106

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR--LDLAIEFLDYMIS 327
            LI   C  GK ++A+ +L     K + P+  +Y+ L+ A CK+G+  LD ++  L  M  
Sbjct: 1107 LIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMED 1166

Query: 328  DGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            +GC  + V +  I++A  +    D+  ++  ++
Sbjct: 1167 NGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 213  AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            A      LE +G QPD+ + N+L+    +MG+      ++ +++ RG  P+ +T++ LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 273  SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             LC  G+   A+        +G   +  SY  LI+  CK G    AI+ L  +      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 333  DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            D+V YNTI+ A CK+    +A  +F +++  G   +V +YNT+       G    A+G++
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 393  SEMLSKGIEPDEITYNSLISCLCRDG--MVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            ++M+ K I P+  TYN L+  LC++G  ++DE++ +L  ME    +   +++ III    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 451  KTRRINESIEVLAAMFEKG 469
            +    ++  ++L  M  +G
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 2/229 (0%)

Query: 204  MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             C  G +   F  +  +  RG  PD I++  L+  L   G+  +      +++++G + N
Sbjct: 971  FCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLN 1030

Query: 264  VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             V+Y  LI+ +C+ G T  A+ +LR    +   PD   Y+ +I A CK   +  A     
Sbjct: 1031 QVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFF 1090

Query: 324  YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             M   G   D+V YNT++  FC  G   +A+ +  K+      PNV +YN +  AL   G
Sbjct: 1091 EMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150

Query: 384  DKI--RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
              +   +L M+S+M   G + + +T+  +IS L      D+   LL +M
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 99/206 (48%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ ++ K      A+     +   G  PD++  N ++  FC  G       
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+   G PP+  + NT+   L   G   +AL    ++L++G + ++++Y +LI+ +C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    A+ LL  ++    +P V+ Y+ II   CK + ++E+  + + M  KG   +  
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G    G   EA+ L N +V
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMV 261



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 20/230 (8%)

Query: 51   GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
            G+   +   +  ++  G  PD +  T LI     + + NKA+   + L   G + +  +Y
Sbjct: 975  GQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSY 1034

Query: 110  NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
              LI+G CK      A K+L ++  R   PDVV YN +I +LC   ++  A+ +F ++  
Sbjct: 1035 GTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNV 1094

Query: 170  DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG--MV 210
                  V+TY  LI    + G+  +A+ LL++M                  +CK+G  ++
Sbjct: 1095 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLL 1154

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             ++   +  +E  GC+ + +++ +++  L    + ++ EKL+ EMI+RGL
Sbjct: 1155 DESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 3/174 (1%)

Query: 32   SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
             F + +  +  LI    + G    ++  +  +     KPDVVM   +I    + +  +KA
Sbjct: 1026 GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKA 1085

Query: 92   VRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
              +  E+  K    DV  YN LI GFC   +++ A  +L+++  +  +P+V TYNI++ +
Sbjct: 1086 YGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDA 1145

Query: 151  LCSRG--MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            LC  G  +++ +  +  ++  + CK   +T+ I+I A   + + DK  KLL EM
Sbjct: 1146 LCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 82/170 (48%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A+   + M+     P I+ +N IL +F K  +   A+ +  +L   G  P++ + N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +     G       +++++L +G  PD +T N+LI  LC  G V +A+     + +  
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           F+   +SY  +I G CK      +I++L  +  +  KPN   Y  +I+ +
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDAL 209



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N D A+  F ++  +   P +  +N +  +         A+ +   +  KGI+PD IT N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+C C  G +     +L  +    + P  ++ N +I G C   ++ +++     +  +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 469 GCKPNETTYVLLIEGI 484
           G + N+ +Y  LI G+
Sbjct: 159 GFQLNQVSYGTLINGV 174



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)

Query: 367 PNVSSY--NTMFSALWSSGDKIR----ALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           PN SS+  N+  S   S    I+    A+   + ML     P  I +N ++    +    
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
             AV L   +E    +P +I+ NI+I  FC   +I     VLA + ++G  P+  T   L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I+G+   G   +A+   + L++
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLA 157


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 228/458 (49%), Gaps = 17/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I+   + G  D++      M      P V     LI+ + + R   +A ++ +     G
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             +VF YN+L+S  CK  ++  A  + +++  +G  P VV+YN MI   C +G ++SA  
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           VF ++L    KP +ITY++L+     +G T+ A  L D M                 G+C
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G   ++   ++ L   G  P  ++YN ++   +  G       + TEM   G+ PNV 
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI+  C+    + A+ V+   K KG+  D   Y  LI  +C+ G +  A + L  +
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P+ V Y+++++ F K  N + AL + +++ + G P ++  Y T+ S L   G  
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  + +EML+KGI PD ITY+ LI  LC  G ++ A  +L DM+     PTV  YN +
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTL 789

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I G  K   + E+  +   M +KG  P++TTY +L+ G
Sbjct: 790 ITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 221/446 (49%), Gaps = 17/446 (3%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALIS 114
           +L  +  M   G  P  V+ T++I    ++ K  +AV+V   +   G+P +V     L+ 
Sbjct: 278 ALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMK 337

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+CK   ++ A ++ D++   G  P+ VTY ++I   C  G ++ A+++++Q+   +  P
Sbjct: 338 GYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISP 397

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVR 218
           TV     LI+  +     ++A KL DE                  +CK+G + +A     
Sbjct: 398 TVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWE 457

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G +P V+SYN ++      G  +    +  EM+ +GL+PN++TYS+L+    + G
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            TE A  +    + + + P  ++ + +I+  CK GR   + + L  ++ +G +P  + YN
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+  F K G+ + AL ++ ++  +G  PNV +Y  + +    S +   AL ++ EM +K
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GIE D   Y +LI   CR G +  A  LL +++     P  + Y+ +I GF K + +  +
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAA 697

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           + +   M  +G   +   Y  LI G+
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGL 723



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 216/456 (47%), Gaps = 19/456 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M + G K D    + +I+   +E K  +A       +  G E D  AY+ +I   CK   
Sbjct: 215 MASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPD 274

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A  +L  +R +G+ P  V +  +IG    +G +  A KV  ++L       V+  T 
Sbjct: 275 SVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATT 334

Query: 182 LIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRG 224
           L++    +G  D A++L D+M                   CK G + +A++    ++++ 
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P V + N L+R  L     EE  KL  E ++ G+  NV TY+ L+S LC++GK  +A 
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEAC 453

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +      KG+ P   SY+ +I  +C+ G +D A      M+  G  P+++ Y+ ++  +
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K G+ + A  +++++      P+  + N + + L  +G    +   + +++ +G  P  
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TYN +I    ++G V+ A+ +  +M      P V +Y  +I GFCK+  ++ +++V+  
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDE 633

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           M  KG + + T Y  LI+G    G    A +L + L
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 184/388 (47%), Gaps = 18/388 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           + GK  E+    E MV  G +P VV    +I    Q+   + A  V +E+LEK  +P++ 
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ L+ G+ K    E A  + DR+R    +P   T NI+I  LC  G    +     +L
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +++   PT +TY  +I   + EG  + A+ +  EM                 G CK   +
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  ++++G + DV  Y  L+      G      +L++E+   GL PN V YS +
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS   +    E A+ + +    +G+  D   Y  LIS   K+G+L  A E    M++ G 
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD++ Y+ ++   C  G  + A +I E +      P V  YNT+ +  +  G+   A  
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDG 418
           + +EML KG+ PD+ TY+ L++   +DG
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 202/424 (47%), Gaps = 19/424 (4%)

Query: 78  LIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + + ++ N AV     ++EK   P +   N  +S   K N I  A  V +++ S+G
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
              D  T ++MI +    G +E A   F +      +     Y+I+I+A   +  +  A+
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279

Query: 197 KLLDEM----------------GMC-KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            LL EM                G+C K+G + +A +    + S G   +V+    L++  
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
              G  +   +L  +M   G+ PN VTY+++I   C++G  + A ++    K K ++P  
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           ++ + LI  Y K    + A +  D  ++ G + ++  YN++L+  CK G   +A  I+EK
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEK 458

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   G  P+V SYN M       GD   A G+  EML KG++P+ ITY+ L+    + G 
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
            + A GL   M      P+  + NIII G CK  R +ES + L  + ++G  P   TY  
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 480 LIEG 483
           +I+G
Sbjct: 579 IIDG 582



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 22/356 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PD 105
           + G  D +      M+  G KP+++  + L+  +F++  +  A  + + +   GE   P 
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMR--GENIAPS 537

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            F  N +I+G CKA +   +   L +L   GF P  +TYN +I      G + SA  V+ 
Sbjct: 538 DFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYT 597

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++ +    P V TYT LI         D A+K++DEM                 G C+KG
Sbjct: 598 EMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKG 657

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            +  A Q +  L+  G  P+ + Y+ ++     +   E    L   MI+ G+  ++  Y+
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYT 717

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LIS L ++GK   A ++      KG+ PD  +Y  LI   C  G+L+ A + L+ M   
Sbjct: 718 TLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRK 777

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
              P +  YNT++    K GN  +A  +  ++ D G  P+ ++Y+ + +     G+
Sbjct: 778 CMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 143/285 (50%), Gaps = 18/285 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+  ES   ++ +V  G  P  +    +I  F +E   N A+ V   + K G  P+VF
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI+GFCK+N ++LA KV+D ++++G   DV  Y  +I   C +G + +A ++  +L
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P  + Y+ +I         + A+ L   M                 G+ K+G +
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    + ++G  PD+I+Y++L+  L N G+ E  +K++ +M  + + P V  Y+ L
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTL 789

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           I+   ++G  ++A  +     +KGL PD  +YD L++   KDG L
Sbjct: 790 ITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 5/330 (1%)

Query: 174 PTVITYTILIQATMLEGQTDKAM--KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           P+V+   ++  +  L+ ++D  +   LL+     K+  +  A     SL  +   P +  
Sbjct: 134 PSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKR--INDAVDCFNSLIEKDIVPCLTV 191

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            N+ L  L+      E   +  +M S+G++ +  T S++I +  R+GK E+A    R AK
Sbjct: 192 MNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAK 251

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG+  DA +Y  +I A CK      A+  L  M   G +P  V +  ++    K G   
Sbjct: 252 NKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKML 311

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+++  ++   G P NV    T+       GD   AL +  +M   GI P+ +TY  +I
Sbjct: 312 EAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVII 371

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C++G +D+A  +   M++    PTV + N +I G+ K R   E+ ++       G  
Sbjct: 372 EWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI- 430

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
            N  TY  L+  +   G  +EA  +   +V
Sbjct: 431 ANVFTYNSLLSWLCKEGKMSEACSIWEKMV 460



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 121/284 (42%), Gaps = 3/284 (1%)

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
           D+ G     +V +  +  R L+    + D   +N LL + +   +  +       +I + 
Sbjct: 128 DDWGPVPSVVVARLIESSRRLDF---ESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKD 184

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + P +   +I +S L ++    +A DV      KG+  D  +   +I A  ++G+L+ A 
Sbjct: 185 IVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAE 244

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            +     + G   D   Y+ ++ A CK  ++  AL +  ++ D G  P+   +  +    
Sbjct: 245 GWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVC 304

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G  + A+ +  EMLS G   + +   +L+   C+ G +D A+ L   M      P  
Sbjct: 305 MKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN 364

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++Y +II   CK   ++++ E+   M  K   P       LI G
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRG 408



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 24/212 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI    R G    +   +  +   G  P+ V+ + +I  F + +    A+ + + 
Sbjct: 644 TVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKR 703

Query: 98  LEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +   G P D+  Y  LISG  K  ++  A+++   + ++G  PD++TY+++I  LC++G 
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQ 763

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E+A K+ + + R    PTV  Y  LI     EG   +A +L +EM    KG+V      
Sbjct: 764 LENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM--LDKGLV------ 815

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                     PD  +Y++L+      GK ++G
Sbjct: 816 ----------PDDTTYDILVN-----GKVKDG 832



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 40  FMKLIKRSFRAGK--FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           +  LI    + GK  F   LY    M+A G  PD++  + LI     + +   A +++E 
Sbjct: 716 YTTLISGLLKEGKLLFASELY--AEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773

Query: 98  LE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++ K   P VF YN LI+G  K   ++ A ++ + +  +G  PD  TY+I++      G 
Sbjct: 774 MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833

Query: 157 IESA 160
           + S 
Sbjct: 834 LFSG 837


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 225/464 (48%), Gaps = 18/464 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           F  LIK      + DE+     +M   G  P +  C  L+  F +  ++  A V   E+ 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               +  V+ +N +I+  CK  +++ A   +  + + G  P++VTYN ++   CS G +E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A  +   + R   +P   TY  LI     +G+ ++A K+ +EM                
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C KG +  A  +   +  +G  P + +YN L+  L    + +E E ++ E+  +G+ 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +TY+ILI+  CR    + A  +       G+ P   +Y  L+    K  R+  A + 
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              + S+G LPD++ +N ++   C N N   A E+ + +  +  PP+  ++NT+      
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +  EM  +GI+PD I++N+LIS   R G + +A  +  +M  T F PTV++
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           YN ++ G CK +  + + E+L  M  KG  P++TTY  LIEGI 
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 206/411 (50%), Gaps = 19/411 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  ++  F+  M  +G KP++V    ++  +    +   A  ++  +++   EPD F
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y +LISG CK  ++E A+K+ + +  +G  P  V YN +I   C++G ++ A    D++
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+    PT+ TY  LI A  +E +TD+A  ++ E                  ++ +G  P
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE------------------IQEKGISP 394

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D I+YN+L+         ++   L  EM++ G++P   TY+ L+  L +  + ++A D+ 
Sbjct: 395 DAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +    +G+ PD   ++ LI  +C +  +  A E L  M      PD V +NTI+   C+ 
Sbjct: 455 KKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCRE 514

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++A E+F+++   G  P+  S+NT+ S     GD   A  + +EML  G  P  +TY
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTY 574

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           N+L+  LC++   D A  LL +M S    P   +Y  +I G  K    +E+
Sbjct: 575 NALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDEN 625



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 22/423 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEIL----EKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           L+K+      +N    + E L    ++ G      ++ LI   C  N+ + A +    ++
Sbjct: 119 LLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK 178

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +G  P + T N ++         E+A+ ++ ++ R   K +V T+ I+I          
Sbjct: 179 EKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINV-------- 230

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +CK+G + +A  FV  +E+ G +P++++YN ++    + G+ E  + ++T
Sbjct: 231 ----------LCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            M  + +EP+  TY  LIS +C+ G+ E+A  +     +KGL P A  Y+ LI  +C  G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            LD+A  + D M+  G  P +  YN+++ A       D+A  + +++ + G  P+  +YN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            + +      +  +A  +  EML+ GI+P + TY SL+  L +   + EA  L   + S 
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P VI +N +I G C    +  + E+L  M      P+E T+  +++G    G   EA
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520

Query: 494 MEL 496
            EL
Sbjct: 521 REL 523



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C      +AF+   +++ +G  P + + N LL   L + + E    L  EM    ++ +V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++I+I+ LC++GK + A D +   +  G+ P+  +Y+ ++  YC  GR++ A   L  
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M      PD   Y ++++  CK G  ++A +IFE++   G  P+   YNT+     + G+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A     EML KGI P   TYNSLI  L  +   DEA  ++ +++     P  I+YNI
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I G+C+     ++  +   M   G KP + TY  L+  +       EA +L   + S
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 21/210 (10%)

Query: 30  LLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +L+  +K T+  +  L+    +  +  E+    + + + G  PDV+M   LI        
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
              A  +++ +++    PD   +N ++ G C+  ++E A ++ D ++ RG  PD +++N 
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I     RG I+ AF+V +++L     PTV+TY  L+Q                  G+CK
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ------------------GLCK 583

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
                 A + ++ + S+G  PD  +Y  L+
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 220/415 (53%), Gaps = 22/415 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G K  +  C  L+    +  ++ +   V  E++++  +P++  +N  I+G CKA ++  A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK---VFDQLLRDNCKPTVITYTIL 182
             V++ +++ GFSP++VTYN +I   C +G     ++   +  ++L +   P  IT+  L
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTL 279

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I                   G CK   V  A      ++ +G +P++++YN L+  L N 
Sbjct: 280 ID------------------GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           GK +E   L  +M+  GL+PN+VT++ LI+  C+    ++A  +     E+ L P+A ++
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + +I A+CK G ++      + M+ +G  P++  YN ++A  C+N N   A ++  ++ +
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                +V +YN +       G+  +A  ++ EML+ G++P+ +TYN+L+   C +G +  
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA 501

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           A+ +   ME    R  V++YN++I GFCKT ++ ++  +L  M EKG  PN TTY
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 21/411 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    +  +  E  Y  + M+    +P++      I    +  K NKA  V+E ++ +G
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230

Query: 103 -EPDVFAYNALISGFCK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             P++  YN LI G CK   A ++  A+ +L  + +    P+ +T+N +I   C    + 
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A   F+++ R   KP ++TY  LI      G+ D+A+ L D+M                
Sbjct: 291 AAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALI 350

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CKK M+ +A +    +  +   P+ I++N ++      G  EEG  L   M+  G+ 
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV TY+ LI+ LCR+     A  +L   +   L  D  +Y+ LI  +CKDG    A + 
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M++ G  P+ V YNT++  +C  GN   AL++  ++   G   NV +YN +      
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +G    A  +++EML KG+ P+  TY+ +   +   G + +  G L ++ S
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNISS 581



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 189/375 (50%), Gaps = 21/375 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  +    +I  A +V  R++  GF   + + N ++ +L           V+ ++++  
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P + T+ I I                   G+CK G + +A   +  +++ G  P++++
Sbjct: 196 IQPNLTTFNIFIN------------------GLCKAGKLNKAEDVIEDIKAWGFSPNIVT 237

Query: 232 YNMLLRTLL---NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           YN L+       + GK    + ++ EM++  + PN +T++ LI   C+D     A +   
Sbjct: 238 YNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFE 297

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             + +GL P+  +Y+ LI+    +G+LD AI   D M+  G  P+IV +N ++  FCK  
Sbjct: 298 EMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK 357

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A ++F+ +++    PN  ++NTM  A   +G       + + ML +GI P+  TYN
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+ LCR+  V  A  LL +ME+   +  V++YNI+I G+CK    +++ ++L  M   
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477

Query: 469 GCKPNETTYVLLIEG 483
           G KPN  TY  L++G
Sbjct: 478 GVKPNHVTYNTLMDG 492



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 156/318 (49%), Gaps = 18/318 (5%)

Query: 207 KGMVGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           KG      Q+V + +  R  QP++ ++N+ +  L   GK  + E ++ ++ + G  PN+V
Sbjct: 177 KGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIV 236

Query: 266 TYSILISSLCRDG---KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           TY+ LI   C+ G   K   A  +L+      + P+  +++ LI  +CKD  +  A    
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   G  P+IV YN+++     NG  D+A+ +++K+  +G  PN+ ++N + +     
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                A  +  ++  + + P+ IT+N++I   C+ GM++E   L   M      P V +Y
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTY 416

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW-------RAEAM- 494
           N +I G C+ + +  + ++L  M     K +  TY +LI     GGW       +AE + 
Sbjct: 417 NCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI-----GGWCKDGEPSKAEKLL 471

Query: 495 -ELANALVSMHAISRDTF 511
            E+ N  V  + ++ +T 
Sbjct: 472 GEMLNVGVKPNHVTYNTL 489


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 237/471 (50%), Gaps = 19/471 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G    +   +  MV NG KP+ V+ T L+    +E +  ++  ++E + + G  PDVF
Sbjct: 428 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 487

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI GFCKA ++E A   L  +  R   P+  TY   I      G +E A + F+++
Sbjct: 488 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAM---------KLLDEM--------GMCKKGMV 210
           L     P V  YT LI+    EG   +A          ++L ++        G+ + G +
Sbjct: 548 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKM 607

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF     L+ +G  P+  +YN L+      G  ++  +L+ EM  +G+ P++VTY+IL
Sbjct: 608 HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNIL 667

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ G+ E A ++    + +GLTP+  +Y  ++  YCK      A + L+ M+  G 
Sbjct: 668 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   YN IL   CK    ++AL++F+++ + G    VS +NT+      SG    A  
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANH 786

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM+ K   P+ +TY SLI   C+ GM+ EA  L ++M+     PT  +Y  ++ G+ 
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
               ++E   +   M  KG +P++ TY ++I+     G   EA +L + ++
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 231/459 (50%), Gaps = 18/459 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKY 101
           L++   +A   DE++    SMV  G  PD+     LI  F  E++S +A + ++E+++  
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YNALI GF +   IE A ++ D + + G   +++ +N ++  +C  G +E A 
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++  +++    +P   TY++LI+         +A +LLDEM                 G+
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G +      +R +   G +P+ + Y  L+      G+ EE   ++  M  +G+ P+V
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ LI   C+  + E+A   L    E+ L P+A++Y   I  Y K G +++A  + + 
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S G LP++  Y  ++   CK GN  +A  +F  +       +V +Y+ +   L  +G 
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A G+ SE+  KG+ P+  TYNSLIS  C+ G VD+A  LL +M      P +++YNI
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I G CK   I  +  +   +  +G  PN  TY  +++G
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 19/440 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    R G  +++    + MVA G + ++++   L+    +  K  KA+ +M E++EK 
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPD   Y+ LI G C+   +  A ++LD ++ R  +P V+TY+++I  LC  G ++   
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +++ +  KP  + YT L+ A   EG+ +++  +L+ M                   
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM------------------R 478

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PDV  YN L+       + EE    + EM+ R L PN  TY   I    + G+ E
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A          G+ P+   Y  LI  +CK+G +  A     +++S   L D+  Y+ ++
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               +NG   +A  IF +L + G  PN  +YN++ S     G+  +A  ++ EM  KGI 
Sbjct: 599 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 658

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD +TYN LI  LC+ G ++ A  L  D+E     P  ++Y  ++ G+CK++    + ++
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 718

Query: 462 LAAMFEKGCKPNETTYVLLI 481
           L  M  +G  P+   Y +++
Sbjct: 719 LEEMLLRGVPPDAFIYNVIL 738



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 231/502 (46%), Gaps = 58/502 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           +  L+    + G+ +ES   +E M   G  PDV     LI  F + ++  +A   +ME+L
Sbjct: 454 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 513

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   Y A I G+ KA ++E+A++  + + S G  P+V  Y  +I   C  G + 
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF VF  +L       V TY++LI      G+  +A  +  E+                
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK+G V +A Q +  +  +G  PD+++YN+L+  L   G+ E  + L  ++  RGL 
Sbjct: 634 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 693

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY--------------------- 300
           PN VTY+ ++   C+      A  +L     +G+ PDA+                     
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 753

Query: 301 -------------SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                        S++ LI  YCK G+L  A   L+ MI    +P+ V Y +++   CK 
Sbjct: 754 FQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 813

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A  ++ ++ +    P   +Y ++     + G+      +  EM++KGIEPD++TY
Sbjct: 814 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 873

Query: 408 NSLISCLCRDGMVDEAVGLLVDM------ESTRFRPTVISYNIIILGFCKTRRINESIEV 461
             +I   CR+G V EA  L  ++        + FR  + + ++I  GF     ++E+ EV
Sbjct: 874 YVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEV 933

Query: 462 LAAMFEKGCKPNETTYVLLIEG 483
           L +M + G   N T+   L++G
Sbjct: 934 LRSMVKFGWVSNTTSLGDLVDG 955



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 198/397 (49%), Gaps = 5/397 (1%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           G P+   ++ L+  + K   +  A  V    ++  F P +++ N ++G L     +E  +
Sbjct: 150 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 209

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           KVFD +      P V TYT +I A    G    A ++L EMG  K  ++ +A +  RS+ 
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE-KARLLDEAIELKRSMV 268

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PD+ +Y++L+       +  E + ++ EMI  GL+P  +TY+ LI    R G  E
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +       G+  +   ++ L++  CK G+++ A+E +  M+  G  PD   Y+ ++
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C+  N  +A E+ +++      P V +Y+ + + L   G+      ++ EM+  G++
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ + Y +L++   ++G V+E+  +L  M      P V  YN +I+GFCK +R+ E+   
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 508

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           L  M E+  +PN  TY   I+G    G     ME+A+
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAG----EMEIAD 541



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 54/313 (17%)

Query: 223 RGCQ--PDVISYNMLLRTLLNMG-----------------------------------KW 245
           R C   P+ + ++ML+ +   MG                                   K 
Sbjct: 146 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 205

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-----------------R 288
           E   K+   M +  + P+V TY+ +IS+ C+ G  +DA  VL                 R
Sbjct: 206 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKR 265

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           +  +KGL PD Y+YD LI+ +C + R   A   L  MI  G  P+ + YN ++  F + G
Sbjct: 266 SMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 325

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + +QA  I +++   G   N+  +NT+ + +  +G   +AL ++ EM+ KG+EPD  TY+
Sbjct: 326 DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYS 385

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   CR   +  A  LL +M+  +  PTV++Y++II G C+   +  +  +L  M   
Sbjct: 386 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 445

Query: 469 GCKPNETTYVLLI 481
           G KPN   Y  L+
Sbjct: 446 GLKPNAVVYTTLM 458


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 232/476 (48%), Gaps = 31/476 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P  +    ++    +   +  A+ ++  +E
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKME 246

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  Y+A+I   CK  +   A  +   ++ +G  PD+ TYN MI   CS G  
Sbjct: 247 EISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+TY  LI A + EG+  +A +L DEM               
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--------------- 351

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                RG  P+ I+Y+ ++       + +  E +   M ++G  PN++T++ LI   C  
Sbjct: 352 ---LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D +++L    E GL  D  +Y+ LI  +   G L+ A++ L  MIS G  PDIV  
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTILAAFCKNGNADQALEIFEKLSDV-----------GCPPNVSSYNTMFSALWSSGDKI 386
           +T+L   C NG    ALE+F+ +              G  P+V +YN + S L + G  +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  +   M S  F P V+++  +I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK  R+++ +E+   M  +G   N  TY+ LI G    G    A+++   ++S
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 240/493 (48%), Gaps = 30/493 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    R  + D  +   + M     + D+   T LIK F    K   A+     + 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  +N L+ G C  +++  A  +  ++      P+VVT+  ++  LC  G I 
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D+++ D  +PT ITY  ++      G T  A+ LL +M                
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAI 261

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK G    A      ++ +G  PD+ +YN ++    + G+W + E+L+ EM+ R +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVTY+ LI++  ++GK  +A ++      +G+ P+  +Y  +I  +CK  RLD A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M + GC P+++ +NT++  +C     D  +E+  ++++ G   + ++YNT+    +
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR------ 434
             GD   AL ++ EM+S G+ PD +T ++L+  LC +G + +A+ +   M+ ++      
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 435 -----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
                  P V +YNI+I G     +  E+ E+   M  +G  P+  TY  +I+G+     
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 490 RAEAMELANALVS 502
             EA ++ +++ S
Sbjct: 562 LDEATQMFDSMGS 574



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 201/428 (46%), Gaps = 20/428 (4%)

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KL   F + +    A+ +  ++L     P V  +  L+    +  + +L   +  ++  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
               D+ ++ I+I   CS   +  A   F ++ +    P V+T+  L+            
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH----------- 157

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C +  V +A      +    C+P+V+++  L+  L   G+  E   L+  M
Sbjct: 158 -------GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKDGR 314
           +  GL+P  +TY  ++  +C+ G T  A+D+LR  +E   + P+   Y  +I + CKDGR
Sbjct: 211 MEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGR 270

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A      M   G  PD+  YN+++  FC +G    A ++ +++ +    P+V +YN 
Sbjct: 271 HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +A    G    A  +  EML +GI P+ ITY+S+I   C+   +D A  +   M +  
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P +I++N +I G+C  +RI++ +E+L  M E G   + TTY  LI G    G    A+
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 495 ELANALVS 502
           +L   ++S
Sbjct: 451 DLLQEMIS 458



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV    LI  F +E K  +A  +  E+L +   P+   
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +   + ++G SP+++T+N +I   C    I+   ++  ++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    TY  LI    L G  + A+ LL EM                 G+C  G + 
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  + ++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 663 SKEELKRAVAMLEKL 677



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 29/412 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  ++      M   G  PD+     +I  F    + + A +++ E+LE+   PDV 
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  +   A ++ D +  RG  P+ +TY+ MI   C +  +++A  +F  +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P +IT+  LI       + D  M+LL EM                 G    G +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RG 259
             A   ++ + S G  PD+++ + LL  L + GK ++  ++   M              G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +EP+V TY+ILIS L  +GK  +A ++      +G+ PD  +Y  +I   CK  RLD A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  D M S    P++V + T++  +CK G  D  LE+F ++   G   N  +Y T+    
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
              G+   AL +  EM+S G+ PD IT  ++++ L     +  AV +L  ++
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI   +  G  + +L  ++ M+++G  PD+V C  L+       K   A+ + ++
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 98  LEKYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++K              EPDV  YN LISG     +   A ++ + +  RG  PD +TY+
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            MI  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG-- 608

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G+V  A                I+Y  L+     +G       +  EMIS G+ P+ +
Sbjct: 609 RRGIVANA----------------ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 266 TYSILISSLCRDGKTEDAVDVL 287
           T   +++ L    + + AV +L
Sbjct: 653 TIRNMLTGLWSKEELKRAVAML 674


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 221/435 (50%), Gaps = 19/435 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK  E+   +  M   G  PDVV  + ++  + Q  +  K +++ME L++ G +P+ + Y
Sbjct: 266 GKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTY 325

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N++IS  CK  ++  A +VL  ++++   PD V Y  +I      G +   +K+FD++ R
Sbjct: 326 NSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P  +TYT +I                   G+C+ G V +A +    + S+G +PD 
Sbjct: 386 KKIVPDFVTYTSMIH------------------GLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+      G+ +E   L  +M+ +GL PNVVTY+ L+  LC+ G+ + A ++L  
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             EKGL P+  +Y+ LI+  CK G ++ A++ ++ M   G  PD + Y TI+ A+CK G 
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A E+   + D G  P + ++N + +    SG       +I  ML KGI P+  T+NS
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+   C    +   + +   M +    P   +YNI+I G CK R + E+  +   M EKG
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667

Query: 470 CKPNETTYVLLIEGI 484
                 +Y  LI+G 
Sbjct: 668 FSLTAASYNSLIKGF 682



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 196/398 (49%), Gaps = 24/398 (6%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSR------GFSPDVVTYNIMIGSLCSRGMIE 158
           D+   + L+  F +   +++ N   DR   R       +    + +++    L   G++ 
Sbjct: 140 DLRMAHRLVFEFWEKPHLDVGNS-FDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLL 198

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD+LL          Y +L+         D     L  +     G +  AF+  R
Sbjct: 199 EAGKLFDKLL---------NYGVLVSV-------DSCNLFLARLSNSFDG-IRTAFRVFR 241

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G   + +SYN++L  L  +GK +E   L+ +M  RG  P+VV+YS+++   C+  
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +    + ++   + KGL P+ Y+Y+ +IS  CK GR+  A + L  M +    PD V Y 
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++ F K+GN     ++F+++      P+  +Y +M   L  +G  + A  + SEMLSK
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PDE+TY +LI   C+ G + EA  L   M      P V++Y  ++ G CK   ++ +
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+L  M EKG +PN  TY  LI G+   G   +A++L
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 18/367 (4%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           I  A +V       G   + V+YNI++  LC  G ++ A  +  Q+      P V++Y++
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           ++                   G C+   +G+  + +  L+ +G +P+  +YN ++  L  
Sbjct: 293 IVD------------------GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCK 334

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+  E E+++  M ++ + P+ V Y+ LIS   + G       +    K K + PD  +
Sbjct: 335 TGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVT 394

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I   C+ G++  A +    M+S G  PD V Y  ++  +CK G   +A  +  ++ 
Sbjct: 395 YTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMV 454

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           + G  PNV +Y  +   L   G+   A  ++ EM  KG++P+  TYN+LI+ LC+ G ++
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +AV L+ +M+   F P  I+Y  I+  +CK   + ++ E+L  M +KG +P   T+ +L+
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574

Query: 482 EGIGYGG 488
            G    G
Sbjct: 575 NGFCMSG 581



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 211/435 (48%), Gaps = 29/435 (6%)

Query: 71  DVVMCTKLIKKFFQERK---SNKAVRVMEIL----EKYG-EPDVFAYNALISGFCKANQI 122
           D+ M  +L+ +F+++      N   R  E L    + +G  P VF  +       +A  +
Sbjct: 140 DLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLVF--DVFFQVLVEAGLL 197

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLC-SRGMIESAFKVFDQLLRDNCKPTVITYTI 181
             A K+ D+L + G    V + N+ +  L  S   I +AF+VF +          ++Y I
Sbjct: 198 LEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNI 257

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           ++                    +C+ G V +A   +  +E RG  PDV+SY++++     
Sbjct: 258 ILHL------------------LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           + +  +  KLM E+  +GL+PN  TY+ +IS LC+ G+  +A  VLR  K + + PD   
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LIS + K G + +  +  D M     +PD V Y +++   C+ G   +A ++F ++ 
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  P+  +Y  +      +G+   A  + ++M+ KG+ P+ +TY +L+  LC+ G VD
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A  LL +M     +P V +YN +I G CK   I ++++++  M   G  P+  TY  ++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 482 EGIGYGGWRAEAMEL 496
           +     G  A+A EL
Sbjct: 540 DAYCKMGEMAKAHEL 554



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 170/351 (48%), Gaps = 19/351 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +AGK  E+      M++ G KPD V  T LI  + +  +  +A  +  +++EK   P+V 
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y AL+ G CK  ++++AN++L  +  +G  P+V TYN +I  LC  G IE A K+ +++
Sbjct: 464 TYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  ITYT ++ A                   CK G + +A + +R +  +G QP
Sbjct: 524 DLAGFFPDTITYTTIMDA------------------YCKMGEMAKAHELLRIMLDKGLQP 565

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            ++++N+L+      G  E+GE+L+  M+ +G+ PN  T++ L+   C        +++ 
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY 625

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +    +G+ PD  +Y+ LI  +CK   +  A      M+  G      +YN+++  F K 
Sbjct: 626 KGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKR 685

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
              ++A ++FE++   G       Y+      +  G+    L +  E + K
Sbjct: 686 KKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 182/433 (42%), Gaps = 90/433 (20%)

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD--QLLRD 170
           IS   K  + E   ++L    S+ F PD + + +M      R   +     FD  +L RD
Sbjct: 68  ISTTIKQRRAEPFRRILKPFESK-FRPDHLIWVLM----SIRDDYKLVLDFFDWARLRRD 122

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF-----QFVRSLESRGC 225
              P++ +  I++Q  +       A +L+ E        VG +F     + + + +  G 
Sbjct: 123 ---PSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGA 179

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR--DGKTEDA 283
            P V  +++  + L+  G   E  KL  ++++ G+  +V + ++ ++ L    DG    A
Sbjct: 180 HPLV--FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDG-IRTA 236

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             V R   E G+  +  SY+ ++   C+ G++  A   L  M   G +PD+V+Y+ I+  
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +C+           E+L  V                         L ++ E+  KG++P+
Sbjct: 297 YCQ----------VEQLGKV-------------------------LKLMEELQRKGLKPN 321

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF-------------- 449
           + TYNS+IS LC+ G V EA  +L  M++ R  P  + Y  +I GF              
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381

Query: 450 ---------------------CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
                                C+  ++ E+ ++ + M  KG KP+E TY  LI+G    G
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAG 441

Query: 489 WRAEAMELANALV 501
              EA  L N +V
Sbjct: 442 EMKEAFSLHNQMV 454



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 127/313 (40%), Gaps = 53/313 (16%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI    +AG+  E+      MV  G  P+VV  T L+    +  + + A  ++ 
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  +P+V  YNALI+G CK   IE A K+++ +   GF PD +TY  ++ + C  G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A ++   +L    +PT++T+ +L+    + G  +   +L+  M             
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606

Query: 203 ---------------------------------------GMCKKGMVGQAFQFVRSLESR 223
                                                  G CK   + +A+   + +  +
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G      SYN L++      K+EE  KL  EM + G       Y I +     +G  E+ 
Sbjct: 667 GFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENT 726

Query: 284 VDVLRAAKEKGLT 296
           +++   A EK L 
Sbjct: 727 LELCDEAIEKCLV 739


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AG+F+++   +E +   GC P VV    ++    ++RK ++A+ + E+++K  EP+   Y
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 391

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C   ++E A ++LD +      P+++T NIM+  LC    +E A+K+F+   +
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +TY  LI     +GQ D+A +L ++M                      G    
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 511

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + L  RGC+PD+   N  +  +   G+ E+G  +  ++ S G  P+V +YSILI 
Sbjct: 512 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 571

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G+  +  ++  A K++G   DA +Y+ ++  +CK G++  A E L+ M      P
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 631

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +  Y  I+    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P   +Y+I+I G C+ 
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++ N++      M ++G  PN  TY  +I G+   G   +A  L
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 213/484 (44%), Gaps = 55/484 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RA + D+++  +  M     +P     T LI    + R+  +A+ ++  +++ G E  V 
Sbjct: 156 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 215

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  L+    +  Q+  A  ++D ++     PD+V YN+ I      G ++ A+K F +L
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                KP  ++YT +I                    +CK G +G+A +    +E+    P
Sbjct: 276 KAQGLKPDDVSYTSMIWV------------------LCKAGRLGEAEELFAQMEAERSVP 317

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +YN ++    + G++E+  KL+  +  RG  P+VV+++ +++ L +  K ++A+ + 
Sbjct: 318 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 377

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K K   P++ +Y+ +I   C  GR++ A   LD M      P+++  N ++   CK 
Sbjct: 378 EVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 436

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              ++A +IFE  S  GC P+  +Y ++   L   G    A  +  +ML  G   + + Y
Sbjct: 437 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 496

Query: 408 NSLI-----------------------------------SCLCRDGMVDEAVGLLVDMES 432
            SLI                                    C+ + G V++   +  D+ S
Sbjct: 497 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 556

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
             F P V SY+I+I G  K  +  E+  +  AM ++G   +   Y  +++G    G   +
Sbjct: 557 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 616

Query: 493 AMEL 496
           A E+
Sbjct: 617 AYEI 620



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 185/385 (48%), Gaps = 19/385 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+  F  G+ ++     + ++  GCKPD+ +    +   F+  +  K   + E + 
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG  PDV +Y+ LI G  KA Q    + +   ++ +GF+ D   YN ++   C  G + 
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A+++ +++     +PTV TY  ++                   G+ K   + +A+    
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVD------------------GLAKIDRLDEAYMLFE 657

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S+G + +V+ Y+ L+     +G+ +E   ++ EM+ +GL PNV T++ L+ +L +  
Sbjct: 658 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 717

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A+   ++ KE    P+ Y+Y  LI+  C+  + + A  F   M   G +P++V Y 
Sbjct: 718 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYT 777

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++   K GN   A  +FE+    G  P+ +S+N +   + ++   + A  +  E   +
Sbjct: 778 TMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLR 837

Query: 399 GIEPDEITYNSLISCLCRDGMVDEA 423
           G   +  +  SL+  L +   +++A
Sbjct: 838 GCRINIKSCISLLDALNKSECLEQA 862



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 184/412 (44%), Gaps = 21/412 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           ++ R  +A K +E+    ES    GC PD V    LI    ++ + ++A R+ E +L+  
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              +   Y +LI  F    + E  +K+   L  RG  PD+   N  +  +   G +E   
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 548

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F+ +      P V +Y+ILI      GQ  +   +   M                 G 
Sbjct: 549 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 608

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G V +A++ +  ++ +  QP V +Y  ++  L  + + +E   L  E  S+G+E NV
Sbjct: 609 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 668

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V YS LI    + G+ ++A  +L    +KGLTP+ Y+++ L+ A  K   ++ A+     
Sbjct: 669 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 728

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M    C P+   Y+ ++   C+    ++A   ++ +   G  PNV +Y TM S L   G+
Sbjct: 729 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 788

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
              A  +     + G  PD  ++N+LI  +       EA  +    E TR R
Sbjct: 789 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF---EETRLR 837



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 22/402 (5%)

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           YG P+  A   L +   +A +++ A   +  +R   F P    Y ++IG+L      E A
Sbjct: 140 YGLPNQ-ACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 198

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRS 219
            ++  Q+     +  V  +T L++A   EGQ   A+ L+DE+ G C              
Sbjct: 199 LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC-------------- 244

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                 +PD++ YN+ +      G  +   K   E+ ++GL+P+ V+Y+ +I  LC+ G+
Sbjct: 245 -----LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 299

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A ++    + +   P AY+Y+ +I  Y   GR + A + L+ +   GC+P +V++N+
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           IL    K    D+AL +FE +      PN S+YN +   L   G    A  ++ EM    
Sbjct: 360 ILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 418

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+ +T N ++  LC+   ++EA  +          P  ++Y  +I G  K  +++E+ 
Sbjct: 419 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAY 478

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +   M + G   N   Y  LI      G + +  ++   L+
Sbjct: 479 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 520



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 118/248 (47%)

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           EK++ EM   G        + L ++L R  + +DAV  +   +     P   +Y  LI A
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
             +  R + A+E L  M   G    +  + T++ A  + G    AL + +++      P+
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           +  YN        +G+   A     E+ ++G++PD+++Y S+I  LC+ G + EA  L  
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            ME+ R  P   +YN +I+G+    R  ++ ++L  + E+GC P+  ++  ++  +G   
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368

Query: 489 WRAEAMEL 496
              EA+ L
Sbjct: 369 KVDEALSL 376


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 230/449 (51%), Gaps = 20/449 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VME 96
           + F KL+    + G   E    ++ ++  G  P++      I+   Q+ + + AVR V  
Sbjct: 217 STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGR 276

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++++  +PDV  YN LI G CK ++ + A   L +L + G  PD  TYN +I   C  GM
Sbjct: 277 LIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A ++    + +   P   TY  LI     EG+T++A+ L +E               
Sbjct: 337 VQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA-------------- 382

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 +G +P+VI YN L++ L N G   E  +L +EM  +GL P V T++IL++ LC+
Sbjct: 383 ----LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G   DA  +++    KG  PD ++++ LI  Y    +++ A+E LD M+ +G  PD+  
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN++L   CK    +  +E ++ + + GC PN+ ++N +  +L       +ALG++ EM 
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP-TVISYNIIILGFCKTRRI 455
           +K + PD +T+ +LI   C++G +D A  L   ME       +  +YNIII  F +   +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNV 618

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + ++   M ++   P+  TY L+++G 
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 230/441 (52%), Gaps = 18/441 (4%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           +K + ++ K  +AV V E ++ Y  EP VF+YNA++S    +   + A+KV  R+R RG 
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGI 142

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           +PDV ++ I + S C      +A ++ + +    C+  V+ Y  ++     E   D+  +
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L  +M                  +CKKG V +  + +  +  RG  P++ +YN  ++ L 
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ +   +++  +I +G +P+VVTY+ LI  LC++ K ++A   L     +GL PD++
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ LI+ YCK G + LA   L   + +G +PD   Y +++   C  G  ++AL +F + 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  PNV  YNT+   L + G  + A  + SEM  KG+ P+  T+N L++ LC+ G V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            +A GL+  M S  + P + ++NI+I G+    ++  ++E+L  M + G  P+  TY  L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502

Query: 481 IEGIGYGGWRAEAMELANALV 501
           + G+       + ME    +V
Sbjct: 503 LNGLCKTSKYEDVMETYKTMV 523



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 223/445 (50%), Gaps = 23/445 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVF 107
           + G+ D ++  +  ++  G KPDVV    LI    +  K  +A V + +++ +  EPD F
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+G+CK   ++LA ++L      GF PD  TY  +I  LC  G    A  +F++ 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    KP VI Y  LI+    +G   +A +L  EM                 G+CK G V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   V+ + S+G  PD+ ++N+L+       K E   +++  M+  G++P+V TY+ L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+  K ED ++  +   EKG  P+ ++++ L+ + C+  +LD A+  L+ M +   
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDV---GCPPNVSSYNTMFSALWSSGDKIR 387
            PD V + T++  FCKNG+ D A  +F K+ +V    C  +  +YN +  A     +   
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVTM 620

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  +  EM+ + + PD  TY  ++   C+ G VD     L++M    F P++ +   +I 
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVIN 680

Query: 448 GFCKTRRINESIEVLAAMFEKGCKP 472
             C   R+ E+  ++  M +KG  P
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 219/436 (50%), Gaps = 19/436 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G FD++      M   G  PDV   T  +K F +  + + A+R++  +   G E +V A
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVA 183

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++ GF + N  +   ++  ++ + G S  + T+N ++  LC +G ++   K+ D+++
Sbjct: 184 YCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI 243

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P + TY   IQ                  G+C+KG +  A + V  L  +G +PD
Sbjct: 244 KRGVLPNLFTYNFFIQ------------------GLCQKGELDAAVRMVGRLIDQGPKPD 285

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++YN L+  L    K++E E  + ++++ GLEP+  TY+ LI+  C+ G  + A  +L 
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
            A   G  PD ++Y  LI   C +G  + A+   +  +  G  P+++ YNT++      G
Sbjct: 346 NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A ++  ++S+ G  P V ++N + + L   G    A G++  M+SKG  PD  T+N
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI        ++ A+ +L  M      P V +YN ++ G CKT +  + +E    M EK
Sbjct: 466 ILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525

Query: 469 GCKPNETTYVLLIEGI 484
           GC PN  T+ +L+E +
Sbjct: 526 GCAPNLFTFNILLESL 541



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 187/395 (47%), Gaps = 18/395 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y   +  + +  +++ A  V +R+      P V +YN ++  L   G  + A KV+ ++
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P V ++TI +++     +   A++LL+ M                   S+GC+ 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNM------------------SSQGCEM 179

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++Y  ++         +EG +L  +M++ G+   + T++ L+  LC+ G  ++   +L
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G+ P+ ++Y+  I   C+ G LD A+  +  +I  G  PD+V YN ++   CKN
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN 299

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +A     KL + G  P+  +YNT+ +     G    A  ++   +  G  PDE TY
Sbjct: 300 SKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTY 359

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SLI  LC +G  + A+ L  +      +P VI YN +I G      I E+ ++ + M E
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           KG  P   T+ +L+ G+   G  ++A  L   ++S
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 168/382 (43%), Gaps = 57/382 (14%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F   E  +  LI      G+ + +L      +  G KP+V++   LIK    +    +A
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            ++  E+ EK   P+V  +N L++G CK   +  A+ ++  + S+G+ PD+ T+NI+I  
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
             ++  +E+A ++ D ++ +   P V TY  L+                   G+CK    
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLN------------------GLCKTSKY 512

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               +  +++  +GC P++ ++N+LL +L    K ++   L+ EM ++ + P+ VT+  L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572

Query: 271 ISSLCRDGKTEDAVDVLRAAKE------------------------------------KG 294
           I   C++G  + A  + R  +E                                    + 
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L PD Y+Y  ++  +CK G +DL  +FL  M+ +G +P +     ++   C      +A 
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692

Query: 355 EIFEKLSDVGCPPNVSSYNTMF 376
            I  ++   G  P   + NT+F
Sbjct: 693 GIIHRMVQKGLVP--EAVNTIF 712


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AG+F+++   +E +   GC P VV    ++    ++RK ++A+ + E+++K  EP+   Y
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 125

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C   ++E A ++LD +      P+++T NIM+  LC    +E A+K+F+   +
Sbjct: 126 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 185

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +TY  LI     +GQ D+A +L ++M                      G    
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 245

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + L  RGC+PD+   N  +  +   G+ E+G  +  ++ S G  P+V +YSILI 
Sbjct: 246 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 305

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G+  +  ++  A K++G   DA +Y+ ++  +CK G++  A E L+ M      P
Sbjct: 306 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 365

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +  Y  I+    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P   +Y+I+I G C+ 
Sbjct: 426 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 485

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++ N++      M ++G  PN  TY  +I G+   G   +A  L
Sbjct: 486 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 529



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 197/405 (48%), Gaps = 30/405 (7%)

Query: 81  KFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           KFF E K+              +PD  +Y ++I   CKA ++  A ++  ++ +    P 
Sbjct: 4   KFFHELKAQGL-----------KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 52

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
              YN MI    S G  E A+K+ ++L    C P+V+++  ++     + + D+A+ L +
Sbjct: 53  AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 112

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            M                    +  +P+  +YN+++  L   G+ EE  +++ EM    L
Sbjct: 113 VM-------------------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 153

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN++T +I++  LC+  K E+A  +  +A ++G  PD  +Y  LI    K G++D A  
Sbjct: 154 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 213

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + M+  G   + V Y +++  F  +G  +   +IF++L   GC P+++  NT    ++
Sbjct: 214 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 273

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G+  +   +  ++ S G  PD  +Y+ LI  L + G   E   +   M+   F     
Sbjct: 274 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 333

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +YN ++ GFCK+ +++++ E+L  M EK  +P   TY  +++G+ 
Sbjct: 334 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 378



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 19/373 (5%)

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
           +A K    L+++G  PD V+Y  MI  LC  G +  A ++F Q+  +   P    Y  +I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                             MG    G    A++ +  L  RGC P V+S+N +L  L    
Sbjct: 61  ------------------MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 102

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K +E   L  E++ +  EPN  TY+I+I  LC  G+ E+A  +L   +   L P+  + +
Sbjct: 103 KVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 161

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   CK  +L+ A +  +     GC PD V Y +++    K G  D+A  +FEK+ D 
Sbjct: 162 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 221

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G   N   Y ++    +  G K     +  E++ +G +PD    N+ + C+ + G V++ 
Sbjct: 222 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 281

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +  D+ S  F P V SY+I+I G  K  +  E+  +  AM ++G   +   Y  +++G
Sbjct: 282 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 341

Query: 484 IGYGGWRAEAMEL 496
               G   +A E+
Sbjct: 342 FCKSGKVHKAYEI 354



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 190/426 (44%), Gaps = 30/426 (7%)

Query: 7   CINPKSNERVRVSSSAETR---PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C+  +  E  R+    E     PN  LL+ ++       ++ R  +A K +E+    ES 
Sbjct: 133 CLGGRVEEAYRILDEMEHASLFPN--LLTVNI-------MVDRLCKARKLEEAYKIFESA 183

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQI 122
              GC PD V    LI    ++ + ++A R+ E +L+     +   Y +LI  F    + 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E  +K+   L  RG  PD+   N  +  +   G +E    +F+ +      P V +Y+IL
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I      GQ  +   +   M                 G CK G V +A++ +  ++ +  
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           QP V +Y  ++  L  + + +E   L  E  S+G+E NVV YS LI    + G+ ++A  
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +L    +KGLTP+ Y+++ L+ A  K   ++ A+     M    C P+   Y+ ++   C
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 483

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +    ++A   ++ +   G  PNV +Y TM S L   G+   A  +     + G  PD  
Sbjct: 484 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543

Query: 406 TYNSLI 411
           ++N+LI
Sbjct: 544 SFNALI 549



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 19/350 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+  F  G+ ++     + ++  GCKPD+ +    +   F+  +  K   + E + 
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 289

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG  PDV +Y+ LI G  KA Q    + +   ++ +GF+ D   YN ++   C  G + 
Sbjct: 290 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A+++ +++     +PTV TY  ++                   G+ K   + +A+    
Sbjct: 350 KAYEILEEMKEKCVQPTVATYGAIVD------------------GLAKIDRLDEAYMLFE 391

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S+G + +V+ Y+ L+     +G+ +E   ++ EM+ +GL PNV T++ L+ +L +  
Sbjct: 392 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 451

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A+   ++ KE    P+ Y+Y  LI+  C+  + + A  F   M   G +P++V Y 
Sbjct: 452 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYT 511

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           T+++   K GN   A  +FE+    G  P+ +S+N +   + ++   + A
Sbjct: 512 TMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           K   E+ ++GL+P+ V+Y+ +I  LC+ G+  +A ++    + +   P AY+Y+ +I  Y
Sbjct: 4   KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
              GR + A + L+ +   GC+P +V++N+IL    K    D+AL +FE +      PN 
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 122

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
           S+YN +   L   G    A  ++ EM    + P+ +T N ++  LC+   ++EA  +   
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
                  P  ++Y  +I G  K  +++E+  +   M + G   N   Y  LI      G 
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 490 RAEAMELANALV 501
           + +  ++   L+
Sbjct: 243 KEDGHKIFKELI 254


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 222/444 (50%), Gaps = 18/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  ++    + G   ES   +  ++  G   +   C   I+   +  +  +AV ++E ++
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y  PDV  YN L+ G CK ++++ A + L R+ ++G  PD  TYN +I   C R M++ 
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++    +     P  +TY  LI     EG  ++A++L +E                  
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA----------------- 280

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +++  +PD++ YN L++ L   G      ++M EM+  G  P++ TY+I+I+ LC+ G 
Sbjct: 281 -QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA  V+  A  KG  PD ++++ +I  YCK  +LD A++ ++ M   G  PD + YN+
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L   CK G A +  E FE++   GC PN  +YN +            A G+I  M   G
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD I++N+LI   CR+G +D A  L   ++   +  T  ++NI+I  +     +  + 
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 519

Query: 460 EVLAAMFEKGCKPNETTYVLLIEG 483
           ++   M  KG KP+  TY +L++G
Sbjct: 520 KIFGEMISKGYKPDLYTYRVLVDG 543



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 227/448 (50%), Gaps = 19/448 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G+ +E++  +ESM A    PDVV    L++   ++ K  +A + +  +   G  PD F 
Sbjct: 163 GGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I G+CK + ++ A ++L     +GF PD VTY  +I  LC+ G +E A ++F++  
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
             + KP ++ Y  L++    +G    A+++++EM                 G+CK G + 
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A   +     +G  PDV ++N ++       K +   +L+  M   G+ P+ +TY+ ++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC+ GK ++  +       KG  P+A +Y+ LI  +CK  +L+ A   +  M  DG +
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD +++NT++  FC+NG+ D A  +F+KL + G      ++N +  A  S  +   A  +
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM+SKG +PD  TY  L+   C+   VD A   L +M S  F P++ ++  ++     
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVL 479
             R++E++ ++  M   G  P     +L
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPEVVDTIL 609



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 216/452 (47%), Gaps = 17/452 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D++      M++ G  PD    T  IK F    + + A+R++  L + G +    AY  +
Sbjct: 27  DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTV 86

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + G         A  + D +  R   PDV T+N ++ +LC +G I  +  +  ++L+   
Sbjct: 87  VRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGM 146

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQF 216
                T  I I+     G+ ++A+ L++ M                G+CK   V +A Q+
Sbjct: 147 SVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQY 206

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +R + ++GC PD  +YN ++         +E  +L+ + I +G  P+ VTY  LI+ LC 
Sbjct: 207 LRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA 266

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  E A+++   A+ K L PD   Y+ L+   C+ G +  A++ ++ M+ DGC PDI  
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   CK GN   A  +       G  P+V ++NTM            AL ++  M 
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW 386

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             GI PD ITYNS+++ LC+ G   E      +M     RP  I+YNI+I  FCK  ++ 
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           E+  V+  M + G  P+  ++  LI G    G
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 198/409 (48%), Gaps = 18/409 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   AYNA++         + A+KV  R+ S G +PD  T+ + I S C  G    A ++
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              L    C    + Y  +++     G    A  L DEM                  +C+
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           KG + ++   +  +  RG   +  + N+ +R L   G+ EE   L+  M +  + P+VVT
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVT 186

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ L+  LC+D K ++A   LR    +G  PD ++Y+ +I  YCK   L  A E L   I
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G +PD V Y +++   C  G+ ++ALE+F +       P++  YN++   L   G  +
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL +++EM+  G  PD  TYN +I+ LC+ G + +A  ++ D     + P V ++N +I
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            G+CK  +++ +++++  M+  G  P+  TY  ++ G+   G   E  E
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 18/365 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P    YN ++ +L +    + A KV+ ++L     P   T+T+ I++  + G+   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           ++LL  +                 G+   G    A      +  R   PDV ++N +L  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L   G   E   L+ +++ RG+  N  T +I I  LC  G+ E+AV  L  + +  + PD
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAV-ALVESMDAYIAPD 183

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ L+   CKD ++  A ++L  M++ GC+PD   YNTI+  +CK     +A E+ +
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
                G  P+  +Y ++ + L + GD  RAL + +E  +K ++PD + YNSL+  LCR G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           ++  A+ ++ +M      P + +YNI+I G CK   I+++  V+     KG  P+  T+ 
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363

Query: 479 LLIEG 483
            +I+G
Sbjct: 364 TMIDG 368



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC P   +YN ++  L+N    ++  K+   M+S G+ P+  T+++ I S C  G+   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +LR+  E+G      +Y  ++      G    A    D M+     PD+  +N +L A
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C+ G+  ++  +  K+   G   N  + N     L   G    A+ ++ E +   I PD
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPD 183

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TYN+L+  LC+D  V EA   L  M +    P   +YN II G+CK   + E+ E+L 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
               KG  P+  TY  LI G+   G    A+EL N
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN 278


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 238/481 (49%), Gaps = 18/481 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK D    ++  M   G   D+V    L+  + +    ++A  +++ +   G +P +F
Sbjct: 236 KDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLF 295

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+G CK    E A +VLD +   G  P+  T+N M+   C +  +  A +VF+++
Sbjct: 296 TYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEM 355

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L+    P +I+++ ++      G+  +A+   ++M                 G C+   V
Sbjct: 356 LQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  RGC  DV++YN LL  L      ++ ++L  EM+ RG+ P+  T + L
Sbjct: 416 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTL 475

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+DG    A+ +      + L PD  +Y+ L+  +CK G ++ A E    MIS   
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P  ++++ ++  FC  G   +A  +++++ + G  P + + NT+      +G+  +A  
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            ++ M+S+G+ PD ITYN+LI+   ++   D A  L+ +ME     P +++YN I+ GF 
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS 655

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           +  R+ E+  VL  M +KG  P+++TY  LI G        EA  + + ++    +  D 
Sbjct: 656 RHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 715

Query: 511 F 511
           F
Sbjct: 716 F 716



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 197/397 (49%), Gaps = 18/397 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  ++ LI  + +A ++   ++    LR RGF   +   N ++G++   G ++ A+KV++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
             ++      V T  I++ A                  +CK G +     ++  +E +G 
Sbjct: 214 DFVKSGNIVNVYTLNIMVNA------------------LCKDGKLDNVGVYLSEMEEKGV 255

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
             D+++YN L+      G   E   L+  M  +GL+P + TY+ LI+ LC++G  E A  
Sbjct: 256 YADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKR 315

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL      GL P+A +++P++   C+   +  A    + M+  G +PD++++++I+  F 
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFS 375

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +NG   +AL  FEK+  VG  P+   Y  + +    + D   AL M +EM+ +G   D +
Sbjct: 376 RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV 435

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN+L++ LCR  M+D+A  L  +M      P   +   +I G+CK   + +++ +   M
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +  KP+  TY  L++G    G   +A EL   ++S
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 1/133 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +IK   RAG   ++  F+ +M++ G  PD +    LI  F +E   ++A  ++  +E+ G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++  YNA++ GF +  +++ A  VL ++  +G +PD  TY  +I    S+  ++ AF
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699

Query: 162 KVFDQLLRDNCKP 174
           +V D++L+    P
Sbjct: 700 RVHDEMLQRGFVP 712



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 3/172 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      G   E+    + M   G KP +V C  +IK + +    +KA   +  + 
Sbjct: 542 FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMI 601

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD   YN LI+ F K    + A  +++ +  RG  P++VTYN ++G     G ++
Sbjct: 602 SEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQ 661

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            A  V  +++     P   TYT LI   + +    +A ++ DE  M ++G V
Sbjct: 662 EAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE--MLQRGFV 711


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 247/483 (51%), Gaps = 22/483 (4%)

Query: 12  SNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPD 71
           SN   +  +   T  +T        ET  ++L + S     FD     ++ + ++G  P+
Sbjct: 34  SNSTFKFPTLCTTPSSTTHHPLPPNETLLLQLTQSS----SFDSITTLLKQLKSSGSIPN 89

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
                 LI+ F    +    ++++E  E   +PD   YN  ++   + N+++L   +  +
Sbjct: 90  ATTFATLIQSFTNFHEIENLLKILEN-ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSK 148

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + + G   DV T+N++I +LC    +  A  + +++     KP  IT+T L+Q  + EG 
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            + A+K+  +M                 G CK+G V +A +FV  +   G  PD +++N 
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+     +G   +   ++  MI +G +P+V TY+ LIS +C+ G+ E A+++L+    + 
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            +P+  +Y+ LISA CK+  ++ A +    ++S G LPD+  +NT++   C + N D A+
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAM 388

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+FE++ + GC P+  +Y+ +  +L        AL ++ EM S G   + + YN+LI  L
Sbjct: 389 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+   +++A  +   ME      + ++YN +I G CK +R+ E+ +++  M  +G KP++
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508

Query: 475 TTY 477
            TY
Sbjct: 509 FTY 511



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 224/453 (49%), Gaps = 19/453 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VM 95
           E  F  L++     G  + +L   + M+  GC    V    L+  F +E +  +A+R V+
Sbjct: 193 EITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVL 252

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ E+   PD   +N+L++GFC+   +  A  ++D +  +GF PDV TYN +I  +C  G
Sbjct: 253 EVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLG 312

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             E A ++  Q++   C P  +TY  LI A                  +CK+  +  A  
Sbjct: 313 EFEKAIEILQQMILRECSPNTVTYNTLISA------------------LCKENEIEAATD 354

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             R L S+G  PDV ++N L++ L      +   ++  EM ++G +P+  TYSILI SLC
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
            + + ++A+ +L+  +  G   +A  Y+ LI   CK  R++ A E  D M   G     V
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   CKN   ++A ++ +++   G  P+  +YN++ +     GD  +A  ++  M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            S G EPD  TY +LI  LCR G VD A  LL  ++      T  +YN +I      +R 
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            E + +   M EK   P+  T+ ++  G+  GG
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 230/460 (50%), Gaps = 19/460 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  LIK   +A +   ++  +E M  +G KPD +  T L++ F +E   N A+++ + 
Sbjct: 159 STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQ 218

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +  YG      +   L++GFCK  ++E A + +  +   GFSPD VT+N ++   C  G 
Sbjct: 219 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A  + D ++     P V TY  LI                   GMCK G   +A + 
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLIS------------------GMCKLGEFEKAIEI 320

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           ++ +  R C P+ ++YN L+  L    + E    L   ++S+GL P+V T++ LI  LC 
Sbjct: 321 LQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCL 380

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A+++    K KG  PD ++Y  LI + C + RL  A+  L  M S GC  + V 
Sbjct: 381 SKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT++   CK+   + A EIF+++  +G   +  +YNT+   L  +     A  ++ +M+
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +G++PD+ TYNSL++  CR G +++A  ++  M S    P + +Y  +I G C+  R++
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + ++L ++  KG       Y  +I+ +       E M L
Sbjct: 561 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRL 600



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 23/456 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F   +  F  L+    R G  +++L  ++ M+  G  PDV     LI    +  +  KA+
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAI 318

Query: 93  RVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +++ ++ +   P+   YN LIS  CK N+IE A  +   L S+G  PDV T+N +I  L
Sbjct: 319 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C     + A ++F+++    CKP   TY+ILI +   E +  +A+ LL EM         
Sbjct: 379 CLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA 438

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK   +  A +    +E  G     ++YN L+  L    + EE  +LM +
Sbjct: 439 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI  GL+P+  TY+ L++  CR G  E A D+++     G  PD ++Y  LI   C+ GR
Sbjct: 499 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR 558

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D+A + L  +   G +     YN ++ A        + + +F ++ +   PP+  ++  
Sbjct: 559 VDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKI 618

Query: 375 MFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL-VDMES 432
           +F  L + G  I+ A+    EML KGI P+  ++  L   LC   M D  + L+ + ME 
Sbjct: 619 VFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEK 678

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +      S   +I GF K R+ N+++  L  + ++
Sbjct: 679 AQMSERETS---MIRGFLKIRKFNDALANLGGILDR 711


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AG+F+++   +E +   GC P VV    ++    ++RK ++A+ + E+++K  EP+   Y
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 257

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C   ++E A ++LD +      P+++T NIM+  LC    +E A+K+F+   +
Sbjct: 258 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 317

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +TY  LI     +GQ D+A +L ++M                      G    
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 377

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + L  RGC+PD+   N  +  +   G+ E+G  +  ++ S G  P+V +YSILI 
Sbjct: 378 GHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 437

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G+  +  ++  A K++G   DA +Y+ ++  +CK G++  A E L+ M      P
Sbjct: 438 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 497

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +  Y  I+    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 557

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P   +Y+I+I G C+ 
Sbjct: 558 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 617

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++ N++      M ++G  PN  TY  +I G+   G   +A  L
Sbjct: 618 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 661



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 216/467 (46%), Gaps = 20/467 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F    + +  LI     A + + +L  +  M   G +  V + T L++   +E +   
Sbjct: 39  LKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 98

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ ++ E+     EPD+  YN  I  F KA  +++A K    L+++G  PD V+Y  MI 
Sbjct: 99  ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIW 158

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G +  A ++F Q+  +   P    Y  +I                  MG    G 
Sbjct: 159 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI------------------MGYGSAGR 200

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
              A++ +  L  RGC P V+S+N +L  L    K +E   L  E++ +  EPN  TY+I
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNI 259

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC  G+ E+A  +L   +   L P+  + + ++   CK  +L+ A +  +     G
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PD V Y +++    K G  D+A  +FEK+ D G   N   Y ++    +  G K    
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  E++ +G +PD    N+ + C+ + G V++   +  D+ S  F P V SY+I+I G 
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            K  +  E+  +  AM ++G   +   Y  +++G    G   +A E+
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 486



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 22/402 (5%)

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           YG P+  A   L +   +A +++ A   +  +R   F P    Y ++IG+L      E A
Sbjct: 6   YGLPNQ-ACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRS 219
            ++  Q+     +  V  +T L++A   EGQ   A+ L+DE+ G C              
Sbjct: 65  LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSC-------------- 110

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                 +PD++ YN+ +      G  +   K   E+ ++GL+P+ V+Y+ +I  LC+ G+
Sbjct: 111 -----LEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 165

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A ++    + +   P AY+Y+ +I  Y   GR + A + L+ +   GC+P +V++N+
Sbjct: 166 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           IL    K    D+AL +FE +      PN S+YN +   L   G    A  ++ EM    
Sbjct: 226 ILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 284

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+ +T N ++  LC+   ++EA  +          P  ++Y  +I G  K  +++E+ 
Sbjct: 285 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAY 344

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +   M + G   N   Y  LI      G + +  ++   L+
Sbjct: 345 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELI 386



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 148/343 (43%), Gaps = 57/343 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+  F  G+ ++     + ++  GCKPD+ +    +   F+  +  K   + E + 
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            YG  PDV +Y+ LI G  KA Q    + +   ++ +GF+ D   YN ++   C  G + 
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481

Query: 159 SAFKVFDQLLRDNCKPTVITYTILI----------QATML-------------------- 188
            A+++ +++     +PTV TY  ++          +A ML                    
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541

Query: 189 -----EGQTDKAMKLLDEMGMCKKGM-------------------VGQAFQFVRSLESRG 224
                 G+ D+A  +L+EM   KKG+                   + +A    +S++   
Sbjct: 542 DGFGKVGRIDEAYLILEEM--MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P+  +Y++L+  L  + K+ +      +M  +GL PNVVTY+ +IS L + G   DA 
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 659

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
            +    K  G  PDA S++ LI       R   A +   Y +S
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLS 702


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 241/498 (48%), Gaps = 18/498 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L   V    F  LI       K  E++  I  M    C PD V    ++    ++ K N+
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  ++  ++  G  P+   +N L+SG+CK   ++ A +V+D +      PDV TYN++IG
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            LC  G I+ AF++ D++      P V+TY  LI        + K  +L+D+M       
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K+G +  A   +R +E  G  PD +++N L+      G+  E  ++M
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  +GL+ N VT + ++ +LC + K +DA  +L +A ++G   D  SY  LI  Y KD
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+   A++  D M     +P I+ YNT++   C +G  DQ+++   +L + G  P+ ++Y
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT+       G   +A    ++M+ K  +PD  T N L+  LC +GM+D+A+ L     S
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                  ++YN II G CK  R  E+ ++LA M EK   P+  TY  ++  +   G   E
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKE 685

Query: 493 AMELANALVSMHAISRDT 510
           A E  + +V    +   T
Sbjct: 686 AEEFMSRIVEQGKLQDQT 703



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 212/460 (46%), Gaps = 42/460 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK DE+    + M      PDVV    LI   F    S K   +++ +E  G +P+  
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN ++  + K  +++ A   L ++   GFSPD VT+N +I   C  G +  AF++ D++
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R   K   +T   ++     E + D A KLL                   S   RG   
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLS------------------SASKRGYFV 490

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D +SY  L+      GK  E  KL  EM  + + P+++TY+ +I  LC  GKT+ ++D L
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E GL PD  +Y+ +I  YC++G+++ A +F + M+     PD+   N +L   C  
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+AL++F      G   +  +YNT+ S L        A  +++EM  K + PD  TY
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670

Query: 408 NSLISCLCRDGMVDEA---------VGLLVDMESTRFR--------------PTVISYNI 444
           N+++S L   G + EA          G L D   +  +              P  ++++ 
Sbjct: 671 NAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSE 730

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            I   C   +  +++ ++    +KG   +++TY+ L+EG+
Sbjct: 731 QINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 206/455 (45%), Gaps = 55/455 (12%)

Query: 103 EPDVFAYNALISGFCK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +P++   N LI+   +      + L+  +   +   G   +  T+NI+I   C    +  
Sbjct: 171 KPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSE 230

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A  +  ++   +C P  ++Y  ++     +G+ ++A  LL +M                 
Sbjct: 231 AIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVS 290

Query: 203 -----------------------------------GMCKKGMVGQAFQFVRSLESRGCQP 227
                                              G+CK G + +AF+    +E+    P
Sbjct: 291 GYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLP 350

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++YN L+    +     +G +L+ +M  +G++PN VTY++++    ++GK ++A + L
Sbjct: 351 DVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 410

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  +E G +PD  +++ LI+ YCK GRL  A   +D M   G   + V  NTIL   C  
Sbjct: 411 RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 470

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D A ++    S  G   +  SY T+    +  G  + A+ +  EM  K I P  ITY
Sbjct: 471 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITY 530

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N++I  LC  G  D+++  L ++  +   P   +YN IILG+C+  ++ ++ +    M +
Sbjct: 531 NTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVK 590

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  KP+  T  +L+ G+   G   +A++L N  +S
Sbjct: 591 KSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 211/466 (45%), Gaps = 77/466 (16%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C + K +E  R+    E   N  LL  DV    +  LI   F      +    I+ M   
Sbjct: 328 CKDGKIDEAFRLKDEME---NLKLLP-DV--VTYNTLINGCFDCSSSLKGFELIDKMEGK 381

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G KP+ V    ++K + +E K + A   +  +E+ G  PD   +N LI+G+CKA ++  A
Sbjct: 382 GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEA 441

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV---------------------- 163
            +++D +  +G   + VT N ++ +LC    ++ A+K+                      
Sbjct: 442 FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 501

Query: 164 -------------FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
                        +D++      P++ITY  +I      G+TD+++  L+E+        
Sbjct: 502 YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPD 561

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G C++G V +AFQF   +  +  +PD+ + N+LLR L   G  ++  KL  
Sbjct: 562 ETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFN 621

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
             IS+G   + VTY+ +IS LC++ + E+A D+L   +EK L PD Y+Y+ ++SA    G
Sbjct: 622 TWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAG 681

Query: 314 RLDLAIEFLDYMISDGCLPD---IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           R+  A EF+  ++  G L D    +N   I ++   +  +D               PN  
Sbjct: 682 RMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESD---------------PNSV 726

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           +++   + L + G    A+ M+ E   KGI   + TY SL+  L +
Sbjct: 727 TFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 161/327 (49%), Gaps = 12/327 (3%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE---GEKLMTEMISRGLEPNVVTYS 268
            A Q    ++    +P++++ N L+  L+           + + +++I  G++ N  T++
Sbjct: 157 HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFN 216

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ILI   C + K  +A+ ++   K+    PD  SY+ ++   CK G+L+ A + L  M ++
Sbjct: 217 ILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNN 276

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G LP+   +N +++ +CK G   +A ++ + ++     P+V +YN +   L   G    A
Sbjct: 277 GLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEA 336

Query: 389 LGMISEMLSKGIEPDEITYNSLIS-CL-CRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
             +  EM +  + PD +TYN+LI+ C  C   +  +   L+  ME    +P  ++YN+++
Sbjct: 337 FRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL--KGFELIDKMEGKGVKPNAVTYNVVV 394

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM----ELANALVS 502
             + K  +++ +   L  M E G  P+  T+  LI G    G  +EA     E++   + 
Sbjct: 395 KWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLK 454

Query: 503 MHAISRDT-FKRLNRTFPLLDVYKEIS 528
           M++++ +T    L     L D YK +S
Sbjct: 455 MNSVTLNTILHTLCGERKLDDAYKLLS 481



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL---GMISE 394
           +T + A+        A +IF ++  +   PN+ + NT+ +AL     K        + S+
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSD 202

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           ++  G++ +  T+N LI   C +  + EA+GL+  M+     P  +SYN I+   CK  +
Sbjct: 203 VIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGK 262

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           +NE+ ++L  M   G  PN  T+ +L+ G    GW  EA ++ + +   + +
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL 314


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 229/475 (48%), Gaps = 36/475 (7%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+A  C  + V      +      K +KA +++ E++ K   PD   Y+ +I+  C A +
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 303

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A  +   ++  G +PDV TY I+I S C  G+IE A  +F+++    C PTV+TYT 
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL---- 220
           LI A +   Q  +A  +   M                 G+CK G + +AF+    L    
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 221 ------------ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                       +     P+V++Y  L+  L    K +   +L+  M+S G EPN + Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C+ GK + A +V     + G  P  ++Y  LI    KDGRLDLA++ L  M+ D
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C P++V Y  ++   C+ G +++AL++   + + GC PNV +Y  +   L  +G    +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L + ++M  KG  P+ +TY  LI+ LC  G++D+A  LL +M+ T +   +  Y   I G
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           F K+     S+ +L  M   G  P    Y +LI+     G    AMEL   ++ +
Sbjct: 664 FSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 230/522 (44%), Gaps = 75/522 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            +I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++   
Sbjct: 112 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 171

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR------ 154
           G  P+   +N+L+  +C       A K+L+R+ + G  P  V YNI IGS+C +      
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231

Query: 155 -----------------------------------GMIESAFKVFDQLLRDNCKPTVITY 179
                                              G  + AF++  +++R    P   TY
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291

Query: 180 TILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLES 222
           + +I       + +KA  L  EM M                 CK G++ QA      + S
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P V++Y  L+   L   +  +   +   M+  G  PN VTY  L+  LC+ G    
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        L P+  +Y  L+   CK  ++D A E LD M+
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC P+ + Y+ ++  FCK G  D A E+F +++  G  P+V +Y ++   ++  G   
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+ML     P+ +TY ++I  LCR G  ++A+ LL  ME     P V++Y  +I
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            G  K  +I+ S+++   M  KGC PN  TY +LI  +   G
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 235/561 (41%), Gaps = 109/561 (19%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKFD++   I+ M+  G  PD    +K+I       K  KA  + + ++  G  PDV+ Y
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A  + + +RS G SP VVTY  +I +      +  A  +F +++ 
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
             C+P  +TY  L+      G   KA ++  ++                           
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   V  A + + ++ S GC+P+ I Y+ L+      GK +  +++  +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+V TY+ LI  + +DG+ + A+ VL    +   TP+  +Y  +I   C+ G  +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++ L  M   GC P++V Y  ++    K G  D +L++F ++S  GC PN  +Y  + 
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 377 SALWSSG--DKIR-------------------------------ALGMISEMLSKGIEP- 402
           + L ++G  DK R                               +LG++ EM S G  P 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 403 ------------------------------------DEITYNSLISCLCRDGMVDEAVGL 426
                                               D   Y SLI  LC    V+EA  L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLL----I 481
             +M    F P +  +  +I G  + ++ +E++++   +  E G   + TT + L    +
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQIFLFTFVV 806

Query: 482 EGIGYGGWRAEAMELANALVS 502
             +GYG      ++L ++  S
Sbjct: 807 IVVGYGKNIEPQVDLGDSFSS 827



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 50/422 (11%)

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           L+ +G  P    YNAL+     A Q++L  +V   +   GF  D  T      +LC  G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A    D + R++ K   +  T +I   M     D+AM  L  M              
Sbjct: 91  WADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G  KK  +G   + +  + + GC P+   +N L+ +  N   +    KL+  M + G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P  V Y+I I S+C               +EK  +PD                LDLA 
Sbjct: 208 CPPGYVVYNIFIGSIC--------------GQEKLPSPDL---------------LDLAE 238

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M++  C+ + VN        C  G  D+A ++ +++   G  P+ S+Y+ + + L
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +    +A  +  EM   G+ PD  TY  LI   C+ G++++A  L  +M S    PTV
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y  +I  + K +++ ++ ++   M + GC+PN+ TY  L++G+   G  ++A E+   
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 500 LV 501
           L+
Sbjct: 419 LI 420


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 230/522 (44%), Gaps = 75/522 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            +I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++   
Sbjct: 112 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 171

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR------ 154
           G  P+   +N+L+  +C       A K+L+R+ + G  P  V YNI IGS+C +      
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231

Query: 155 -----------------------------------GMIESAFKVFDQLLRDNCKPTVITY 179
                                              G  + AF++  +++R    P   TY
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291

Query: 180 TILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLES 222
           + +I       + +KA  L  EM M                 CK G++ QA      + S
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P V++Y  L+   L   +  +   +   M+  G  PN VTY  L+  LC+ G    
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        L P+  +Y  L+   CK  ++D A E LD M+
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC P+ + Y+ ++  FCK G  D A E+F +++  G  P+V +Y ++   ++  G   
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+ML     P+ +TY ++I  LCR G  ++A+ LL  ME     P V++Y  +I
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            G  K  +I+ S+++   M  KGC PN  TY +LI  +   G
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 229/475 (48%), Gaps = 36/475 (7%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+A  C  + V      +      K +KA +++ E++ K   PD   Y+ +I+  C A +
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 303

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A  +   ++  G +PDV TY I+I S C  G+IE A  +F+++    C PTV+TYT 
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL---- 220
           LI A +   Q  +A  +   M                 G+CK G + +AF+    L    
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 221 ------------ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                       +     P+V++Y  L+  L    K +   +L+  M+S G EPN + Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C+ GK + A +V     + G  P  ++Y  LI    KDGRLDLA++ L  M+ D
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C P++V Y  ++   C+ G +++AL++   + + GC PNV +Y  +   L  +G    +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L + ++M  KG  P+ +TY  LI+ LC  G++D+A  LL +M+ T +   +  Y   I G
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           F K+     S+ +L  M   G  P    Y +LI+     G    AMEL   ++ +
Sbjct: 664 FSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 219/523 (41%), Gaps = 104/523 (19%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKFD++   I+ M+  G  PD    +K+I       K  KA  + + ++  G  PDV+ Y
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A  + + +RS G SP VVTY  +I +      +  A  +F +++ 
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
             C+P  +TY  L+      G   KA ++  ++                           
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   V  A + + ++ S GC+P+ I Y+ L+      GK +  +++  +M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+V TY+ LI  + +DG+ + A+ VL    +   TP+  +Y  +I   C+ G  +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++ L  M   GC P++V Y  ++    K G  D +L++F ++S  GC PN  +Y  + 
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 377 SALWSSG--DKIR-------------------------------ALGMISEMLSKGIEP- 402
           + L ++G  DK R                               +LG++ EM S G  P 
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 403 ------------------------------------DEITYNSLISCLCRDGMVDEAVGL 426
                                               D   Y SLI  LC    V+EA  L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
             +M    F P +  +  +I G  + ++ +E++++   +  +G
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 50/422 (11%)

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           L+ +G  P    YNAL+     A Q++L  +V   +   GF  D  T      +LC  G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A    D + R++ K   +  T +I   M     D+AM  L  M              
Sbjct: 91  WADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G  KK  +G   + +  + + GC P+   +N L+ +  N   +    KL+  M + G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P  V Y+I I S+C               +EK  +PD                LDLA 
Sbjct: 208 CPPGYVVYNIFIGSIC--------------GQEKLPSPDL---------------LDLAE 238

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M++  C+ + VN        C  G  D+A ++ +++   G  P+ S+Y+ + + L
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +    +A  +  EM   G+ PD  TY  LI   C+ G++++A  L  +M S    PTV
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y  +I  + K +++ ++ ++   M + GC+PN+ TY  L++G+   G  ++A E+   
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 500 LV 501
           L+
Sbjct: 419 LI 420



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 126/306 (41%), Gaps = 53/306 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    +AGK D +      M   G  P V   T LI + F++ + + A++V+ ++L+  
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y A+I G C+  + E A K+L  +  +G SP+VVTY  +I  L   G I+ + 
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC---------KKGMVGQ 212
            +F Q+ R  C P  +TY +LI      G  DKA  LL EM            +  + G 
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664

Query: 213 AFQFVRSL------ESRGCQPDVISYNMLLRTLLNMGKWE-------------------- 246
           +  F+ SL      ES G  P    Y ML+      G+ E                    
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724

Query: 247 -----------------EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                            E  +L +EM  RG  P +  +  LI  L    K ++A+ +   
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 784

Query: 290 AKEKGL 295
              +G+
Sbjct: 785 ICHEGV 790



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 53/274 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+ G+ D ++  +  M+ + C P+VV  T +I    +  +S KA++++ ++E
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y ALI G  KA +I+L+  +  ++  +G SP+ VTY ++I  LC+ G+++
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 159 SA---------------------------------FKVFDQLLRDNCKPTVITYTILIQA 185
            A                                   + +++      P    Y +LI  
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDC 696

Query: 186 TMLEGQTDKAMKLLDEM-------------------GMCKKGMVGQAFQFVRSLESRGCQ 226
               G+ + AM+L  EM                    +C    V +AF+    +  RG  
Sbjct: 697 FSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFV 756

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           P++  +  L++ L+ + KW+E  +L   +   G+
Sbjct: 757 PELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 238/502 (47%), Gaps = 55/502 (10%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           ++ L   + M+ +   PDV  C ++++    +   +KAV V   + ++G +P +  YN L
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +  +CK  +++    +L  ++ RG +P+ VTYN++I  L  +G  E A  +  ++L+   
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           K +  TY  LI     +G   +A+ L +EM                 G+CK G +  A Q
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 360

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  + +    PDV+SYN L+     +G   +   L  E+ S  L P +VTY+ L+  LC
Sbjct: 361 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 420

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC----- 330
           R G+ E A  +      +G+ PD  +Y  L++  CK G L +A EF D M+ +G      
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480

Query: 331 ------------------------------LPDIVNYNTILAAFCKNGNADQALEIFEKL 360
                                          PD++ YN ++   CK GN ++A E+ +K+
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  P+  +Y ++  A   +G   +   +  EMLSKG+ P  +TY  LI      G +
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           + A     +M+     P VI+YN +I G CK RR++++    A M EKG  PN+ +Y +L
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660

Query: 481 I-EGIGYGGWRAEAMELANALV 501
           I E    G W+ EA+ L   ++
Sbjct: 661 INENCNMGNWQ-EALSLYKQML 681



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 18/401 (4%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVR 93
           V    +  LI   F  G   E+L   E MV  G  P V      I    +  R S+   +
Sbjct: 302 VSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 361

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + ++L     PDV +YN LI G+C+   +  A  + D LRS    P +VTYN ++  LC 
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
           +G +E A ++  +++ +   P ++TYTIL+  +   G    A +  DEM           
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G  K G   +AF     + ++G  PD+I YN+++  L  +G  EE  +L+ +M+
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S G+ P+ VTY+ +I +   +G+     ++      KGLTP   +Y  LI  +   GRL+
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A  +   M   G LP+++ YN+++   CK    DQA   F ++ + G  PN  SY  + 
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +   + G+   AL +  +ML +G++PD  T+++L+  L +D
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 53/416 (12%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           E  V   + LI  + K + +E    V D++     SPDV   N ++  L  + ++  A +
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V+  +     KPT++TY  L+ +                   CK G V Q    +  ++ 
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDS------------------YCKGGKVQQGLDLLSEMQR 262

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RGC P+ ++YN+L+  L   G++E+ + L+ EM+  GL+ +  TY+ LI      G   +
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +      KG +P   +Y+  I   CK GR+  A++ L  M+++  LPD+V+YNT++ 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +C+ GN  +A  +F++L  +   P + +YNT+   L   G+   A  +  EM+++GI P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 403 DEITYNSLISCLCR-----------DGMVDE------------------------AVGLL 427
           D +TY  L++  C+           D M+ E                        A  L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +M +  F P +I YN+++ G CK   + E+ E+L  M   G  P+  TY  +I  
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 18/286 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ + +      M+  G  PD+V  T L+    +    + A     E+L +  E D +
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY   I G  K      A  + + + ++GF PD++ YN+++  LC  G +E A ++  ++
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + D   P  +TYT +I A +  G+  K  ++  EM                 G   KG +
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF +   ++ +G  P+VI+YN L+  L  + + ++      EM+ +G+ PN  +Y+IL
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           I+  C  G  ++A+ + +   ++G+ PD+ ++  L+    KD +L 
Sbjct: 661 INENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 18/257 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           L+  S + G    +  F + M+  G + D       I    +   +++A  + E +L K 
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+  YN ++ G CK   +E A+++L ++ S G  PD VTY  +I +    G +    
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F ++L     P+V+TYT+LI     +G+ ++A     EM                 G+
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   + QA+ F   +  +G  P+  SY +L+    NMG W+E   L  +M+ RG++P+ 
Sbjct: 630 CKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689

Query: 265 VTYSILISSLCRDGKTE 281
            T+S L+  L +D K +
Sbjct: 690 CTHSALLKQLGKDCKLQ 706



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 117/244 (47%)

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           E +V    +LI    +    E  + V     +  L+PD  + + ++        +  A+E
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G  P IV YNT+L ++CK G   Q L++  ++   GC PN  +YN + + L 
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G+  +A G+I EML  G++    TYN LI      GM+ EA+ L  +M      PTV 
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN  I G CK  R++++++ L+ M      P+  +Y  LI G    G   +A  L + L
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400

Query: 501 VSMH 504
            S++
Sbjct: 401 RSIY 404


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 230/522 (44%), Gaps = 75/522 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            +I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++   
Sbjct: 47  HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 106

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR------ 154
           G  P+   +N+L+  +C       A K+L+R+ + G  P  V YNI IGS+C +      
Sbjct: 107 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 166

Query: 155 -----------------------------------GMIESAFKVFDQLLRDNCKPTVITY 179
                                              G  + AF++  +++R    P   TY
Sbjct: 167 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 226

Query: 180 TILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLES 222
           + +I       + +KA  L  EM M                 CK G++ QA      + S
Sbjct: 227 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 286

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P V++Y  L+   L   +  +   +   M+  G  PN VTY  L+  LC+ G    
Sbjct: 287 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 346

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        L P+  +Y  L+   CK  ++D A E LD M+
Sbjct: 347 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 406

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC P+ + Y+ ++  FCK G  D A E+F +++  G  P+V +Y ++   ++  G   
Sbjct: 407 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 466

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+ML     P+ +TY ++I  LCR G  ++A+ LL  ME     P V++Y  +I
Sbjct: 467 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 526

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            G  K  +I+ S+++   M  KGC PN  TY +LI  +   G
Sbjct: 527 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 568



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 229/475 (48%), Gaps = 36/475 (7%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+A  C  + V      +      K +KA +++ E++ K   PD   Y+ +I+  C A +
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 238

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A  +   ++  G +PDV TY I+I S C  G+IE A  +F+++    C PTV+TYT 
Sbjct: 239 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL---- 220
           LI A +   Q  +A  +   M                 G+CK G + +AF+    L    
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358

Query: 221 ------------ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                       +     P+V++Y  L+  L    K +   +L+  M+S G EPN + Y 
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C+ GK + A +V     + G  P  ++Y  LI    KDGRLDLA++ L  M+ D
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C P++V Y  ++   C+ G +++AL++   + + GC PNV +Y  +   L  +G    +
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L + ++M  KG  P+ +TY  LI+ LC  G++D+A  LL +M+ T +   +  Y   I G
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 598

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           F K+     S+ +L  M   G  P    Y +LI+     G    AMEL   ++ +
Sbjct: 599 FSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 651



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 219/523 (41%), Gaps = 104/523 (19%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKFD++   I+ M+  G  PD    +K+I       K  KA  + + ++  G  PDV+ Y
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A  + + +RS G SP VVTY  +I +      +  A  +F +++ 
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
             C+P  +TY  L+      G   KA ++  ++                           
Sbjct: 322 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 381

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   V  A + + ++ S GC+P+ I Y+ L+      GK +  +++  +M 
Sbjct: 382 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 441

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+V TY+ LI  + +DG+ + A+ VL    +   TP+  +Y  +I   C+ G  +
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++ L  M   GC P++V Y  ++    K G  D +L++F ++S  GC PN  +Y  + 
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 377 SALWSSG--DKIR-------------------------------ALGMISEMLSKGIEP- 402
           + L ++G  DK R                               +LG++ EM S G  P 
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 621

Query: 403 ------------------------------------DEITYNSLISCLCRDGMVDEAVGL 426
                                               D   Y SLI  LC    V+EA  L
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
             +M    F P +  +  +I G  + ++ +E++++   +  +G
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 169/397 (42%), Gaps = 50/397 (12%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D F         CK  +   A   LD +    F  D V    MI  L      + A    
Sbjct: 9   DRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 65

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++  ++C P V+TY  L+                   G  KK  +G   + +  + + G
Sbjct: 66  HRMRCNSCIPNVVTYRTLLS------------------GFLKKKQLGWCKRIINMMMTEG 107

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P+   +N L+ +  N   +    KL+  M + G  P  V Y+I I S+C         
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--------- 158

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
                 +EK  +PD                LDLA +    M++  C+ + VN        
Sbjct: 159 -----GQEKLPSPDL---------------LDLAEKIYGEMLAANCVLNKVNVANFARCL 198

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C  G  D+A ++ +++   G  P+ S+Y+ + + L  +    +A  +  EM   G+ PD 
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TY  LI   C+ G++++A  L  +M S    PTV++Y  +I  + K +++ ++ ++   
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 318

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M + GC+PN+ TY  L++G+   G  ++A E+   L+
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 126/306 (41%), Gaps = 53/306 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    +AGK D +      M   G  P V   T LI + F++ + + A++V+ ++L+  
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y A+I G C+  + E A K+L  +  +G SP+VVTY  +I  L   G I+ + 
Sbjct: 480 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC---------KKGMVGQ 212
            +F Q+ R  C P  +TY +LI      G  DKA  LL EM            +  + G 
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599

Query: 213 AFQFVRSL------ESRGCQPDVISYNMLLRTLLNMGKWE-------------------- 246
           +  F+ SL      ES G  P    Y ML+      G+ E                    
Sbjct: 600 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 659

Query: 247 -----------------EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                            E  +L +EM  RG  P +  +  LI  L    K ++A+ +   
Sbjct: 660 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 719

Query: 290 AKEKGL 295
              +G+
Sbjct: 720 ICHEGV 725



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 53/274 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+ G+ D ++  +  M+ + C P+VV  T +I    +  +S KA++++ ++E
Sbjct: 452 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 511

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y ALI G  KA +I+L+  +  ++  +G SP+ VTY ++I  LC+ G+++
Sbjct: 512 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571

Query: 159 SA---------------------------------FKVFDQLLRDNCKPTVITYTILIQA 185
            A                                   + +++      P    Y +LI  
Sbjct: 572 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDC 631

Query: 186 TMLEGQTDKAMKLLDEM-------------------GMCKKGMVGQAFQFVRSLESRGCQ 226
               G+ + AM+L  EM                    +C    V +AF+    +  RG  
Sbjct: 632 FSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFV 691

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           P++  +  L++ L+ + KW+E  +L   +   G+
Sbjct: 692 PELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 222/449 (49%), Gaps = 9/449 (2%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK++++   I  M+  G  PD    +K++       K   A  + E +++ G   DV+ 
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++  FCKA  IE A K  + +R  G +P+VVTY  +I +      +  A ++F+ +L
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P ++TY+ LI      GQ +KA ++ + M  C    V     + +  +    +P+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPN 638

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  LL       + EE  KL+  M   G EPN + Y  LI  LC+ GK ++A +V  
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G     Y+Y  LI  Y K  R DLA + L  M+ + C P++V Y  ++   CK G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A ++ + + + GC PNV +Y  M       G     L ++  M SKG+ P+ +TY 
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C++G +D A  LL +M+ T +      Y  +I GF   +   ES+ +L  + + 
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 876

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              P  + Y LLI+ +     +A+ +E+A
Sbjct: 877 DTAPFLSVYRLLIDNL----IKAQRLEMA 901



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 45/482 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + KLI     A  F+E++ F+  M A  C P+VV  + L+     +++  +  RV+ ++ 
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 100 K---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-- 154
               Y  P +F  N+L+  +C +     A K+L ++   G  P  V YNI+IGS+C    
Sbjct: 365 MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 155 ----GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
                +++ A K + ++L        I  +   +                   +C  G  
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC------------------LCSAGKY 464

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF  +R +  +G  PD  +Y+ +L  L N  K E    L  EM   GL  +V TY+I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + S C+ G  E A       +E G TP+  +Y  LI AY K  ++  A E  + M+S+GC
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKL----------------SDVGCPPNVSSYNT 374
           LP+IV Y+ ++   CK G  ++A +IFE++                 D    PNV +Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +      S     A  ++  M  +G EP++I Y++LI  LC+ G +DEA  +  +M    
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F  T+ +Y+ +I  + K +R + + +VL+ M E  C PN   Y  +I+G+   G   EA 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 495 EL 496
           +L
Sbjct: 765 KL 766



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 202/424 (47%), Gaps = 38/424 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--- 96
           +  LI    +A K   +    E+M++ GC P++V  + LI    +  +  KA ++ E   
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 97  ----------ILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                       ++Y +    P+V  Y AL+ GFCK++++E A K+LD +   G  P+ +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I  LC  G ++ A +V  ++       T+ TY+ LI       + D A K+L +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G   +A++ ++ +E +GCQP+V++Y  ++     +GK 
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E   +L+  M S+G+ PN VTY +LI   C++G  + A ++L   K+         Y  +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  + K+    L +  LD +  D   P +  Y  ++    K    + AL + E+++    
Sbjct: 856 IEGFNKEFIESLGL--LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913

Query: 366 P--PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                 S+YN++  +L  +     A  + SEM  KG+ P+  ++ SLI  L R+  + EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973

Query: 424 VGLL 427
           + LL
Sbjct: 974 LLLL 977



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 171/433 (39%), Gaps = 66/433 (15%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNAL+    + +  ++  + L ++R           N+++   C  G    A +   +L 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P+  TY  LIQA +   + D A  +  EM +    M G                 
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG----------------- 270

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +      +L  +GKW E    +T + +    P+ V Y+ LIS LC     E+A+D L 
Sbjct: 271 -FTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +     P+  +Y  L+       +L      L+ M+ +GC P    +N+++ A+C +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR------ALGMISEMLSKGIEP 402
           +   A ++ +K+   G  P    YN +  ++    D +       A    SEML+ G+  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP------------------------- 437
           ++I  +S   CLC  G  ++A  ++ +M    F P                         
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 438 ----------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V +Y I++  FCK   I ++ +    M E GC PN  TY  LI    + 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI----HA 562

Query: 488 GWRAEAMELANAL 500
             +A+ +  AN L
Sbjct: 563 YLKAKKVSYANEL 575



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 23/289 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+  + D +   +  M+ N C P+VV+ T++I    +  K+++A ++M+++E
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+V  Y A+I GF    +IE   ++L+R+ S+G +P+ VTY ++I   C  G ++
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + +++ + +       Y  +I+      +  +++ LLDE+G               
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEG--FNKEFIESLGLLDEIG--------------- 874

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM--ISRGLEPNVVTYSILISSLCR 276
                   P +  Y +L+  L+   + E   +L+ E+   S  L     TY+ LI SLC 
Sbjct: 875 ---QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCL 931

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
             K E A  +     +KG+ P+  S+  LI    ++ ++  A+  LD++
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 3/243 (1%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G +     Y+ L+  + RD   +   + L+  ++          + L+  +C++G   +A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +E L  +      P    YN ++ AF K    D A  I  ++S      +  +      +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    AL ++    ++   PD + Y  LIS LC   + +EA+  L  M +T   P 
Sbjct: 280 LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++Y+ ++ G    +++     VL  M  +GC P+   +  L+      G  + A +L  
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 499 ALV 501
            +V
Sbjct: 397 KMV 399


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 214/415 (51%), Gaps = 22/415 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G K  +  C  L+    +E K      V  E++++    ++  +N  I+G C+A ++  A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV---FDQLLRDNCKPTVITYTIL 182
              ++ +++ G SP+VVTYN ++   C RG     +K      ++L +   P  +T+  L
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I                   G CK   V  A +    ++ +G +P++++YN L+  L N 
Sbjct: 280 ID------------------GFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNN 321

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           GK EE   L  +M+  GL+PN+VTY+ LI+  C+    ++A  V     ++ L P+  ++
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + +I AYCK+G ++        M+ +G LP++  YN ++A  C+  +   A E+  ++ +
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   +V +YN +   L  +     A  +++EM + G++P+ +TYN+L+   C +G +  
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           A+ +   ME  R +P V++YN++I G+CK  ++  +  +L  M EKG  PN TTY
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 201/412 (48%), Gaps = 29/412 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R +T+L +F++        I    RAGK +++   IE M A G  P+VV    L+  + +
Sbjct: 195 RIHTNLNTFNI-------FINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247

Query: 85  ERKSNKAVR----VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
              + K  +    + E+L     P+   +N LI GFCK   +  A K  + ++ +G  P+
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +VTYN +I  LC+ G +E A  ++D+++    KP ++TY  LI                 
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN---------------- 351

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CKK M+ +A +    +  +   P+VI++N ++      G  EEG  L + M+  G+
Sbjct: 352 --GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNV TY+ LI+ LCR    + A ++L   + KGL  D  +Y+ LI   CK+ +   A +
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+ M + G  P+ V YNT++  +C  G    AL +  ++      PNV +YN +     
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
                  A G+++EML KG+ P+  TY+ +   +   G   +  G L ++ S
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHLYNISS 581



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 211/450 (46%), Gaps = 25/450 (5%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K  ++ +R     E    +   +AN  +   V     +  F +  K   +     +L
Sbjct: 63  RFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKV--RSFLDSFVKNEKHTVSSVFHSLL 120

Query: 99  EKYGEPDVFAY--NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
              G P   A   + L+  + K  ++  A +   R +  GF   + + N ++ +L     
Sbjct: 121 LDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENK 180

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           I     V+ ++++      + T+ I I                   G+C+ G + +A   
Sbjct: 181 IGDVEYVYKEMIKRRIHTNLNTFNIFIN------------------GLCRAGKLNKAEDA 222

Query: 217 VRSLESRGCQPDVISYNMLLRTLL---NMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           +  +++ G  P+V++YN L+       + GK  + E  M EM++  + PN VT++ LI  
Sbjct: 223 IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+D     A       +++GL P+  +Y+ LI+  C +G+L+ AI+  D M+  G  P+
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV YN ++  FCK     +A ++F+ +S     PNV ++NTM  A    G       + S
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            ML +GI P+  TYN LI+ LCR   +  A  LL +ME+   +  V++YNI+I G CK  
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   + ++L  MF  G KPN  TY  L++G
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 41/367 (11%)

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           T + +  + +L+G    A  L+ +M      K   +  A++     +  G +  + S N 
Sbjct: 111 TVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNP 170

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L+   K  + E +  EMI R +  N+ T++I I+ LCR GK   A D +   K  G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 295 LTPDAYSYDPLISAYCKDG---RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++P+  +Y+ L+  YCK G   ++  A  F+  M+++   P+ V +NT++  FCK+ N  
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A + FE++   G  PN+ +YN++ + L ++G    A+ +  +M+  G++P+ +TYN+LI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVIS------------------------------ 441
           +  C+  M+ EA  +  D+      P VI+                              
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 442 -----YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                YN +I G C+ + +  + E+L  M  KG K +  TY +LI+G+        A +L
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 497 ANALVSM 503
            N + ++
Sbjct: 471 LNEMFNL 477


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 237/485 (48%), Gaps = 56/485 (11%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK 127
           C+P VV  T +I  F +  +  +A+   E + ++  P+   YN +++G CKA     A +
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 128 VLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQA 185
           VL  +R  +  +PD+VTY+ +I   C +G ++ A ++  +++ RD   P V+TYT ++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRS-LESRGCQP 227
              +G+ D+A +++ EM                 G C    V +A +  +  L S   +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++Y  L+      G  E+  K++  M  R   PNVVTYS L+  LC+ G  + A+D+ 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R    KG  P+  +Y  LI   C   ++D A   +D M +  C PD V+YN +L  +C+ 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 348 GNADQALEIFEKLSDVGC------------------------------------PPNVSS 371
           G  ++A ++F++++   C                                     P+V +
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y+ + +    +   + A   I EM+++ + P+ +TY+SLI  LC+ G VD A+ +L +M 
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           + R  P+V ++N +I   C+   ++E+ ++L AM   G +P   TY  L+EG    G   
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482

Query: 492 EAMEL 496
            A EL
Sbjct: 483 IAYEL 487



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 231/462 (50%), Gaps = 28/462 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG-EPDV 106
           R GK D +   +  M   G +PD    + LI  +   RK ++A+++  EIL     +PDV
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             Y ALI GFCK+  +E A K+L  +  R   P+VVTY+ ++  LC  G ++ A  +F +
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +    C P V+TYT LI       + D A  L+DEM                   +  C 
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM------------------TATCCP 286

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD +SYN LL     +G+ EE ++L  EM ++   P+ +TY+ L+   C   + E+A  +
Sbjct: 287 PDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFL 346

Query: 287 LRAAK-EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           L   K   G+ PD  +Y  +++ Y +  R   A EF+  MI+    P+ V Y++++   C
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  D A+E+ + + +    P+V ++N++  AL   GD   A  ++  M + G+EP  +
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMV 466

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI-------SYNIIILGFCKTRRINES 458
           TY +L+    R G ++ A  L   M     + +         +++ +I G CK R I+++
Sbjct: 467 TYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKA 526

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + V+  +  + C+P E   + +++G+   G   EA +L N++
Sbjct: 527 MAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 220/440 (50%), Gaps = 60/440 (13%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P V  +  +I GFCKANQ++ A    +++R    +P+  TYN+++  LC   +   A++
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 163 VFDQLLRD--NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           V  ++ RD  +  P ++TY+ +I                   G CK+G + +A + +R +
Sbjct: 63  VLKEM-RDGKSVAPDLVTYSTVIN------------------GFCKQGEMDRACEILREM 103

Query: 221 ESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +R G  PDV++Y  ++  L   GK +   +++ EM  +G+EP+  T+S LI+  C   K
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163

Query: 280 TEDAVDVLRAA-KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            ++A+ + +         PD  +Y  LI  +CK G L+ A++ L  M    C+P++V Y+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           ++L   CK G+ DQAL++F +++  GC PNV +Y T+   L ++     A  ++ EM + 
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-------------------------EST 433
              PD ++YN+L+   CR G ++EA  L  +M                         E  
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 434 RF-----------RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           RF            P V++Y+I++ G+ + +R  E+ E +  M  +   PN  TY  LI+
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403

Query: 483 GIGYGGWRAEAMELANALVS 502
           G+   G    AME+   +V+
Sbjct: 404 GLCKAGRVDHAMEVLKNMVN 423



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 166/352 (47%), Gaps = 28/352 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  L+    +AG  D++L     M + GC P+VV  T LI       K + A  +M E+ 
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                PD  +YNAL+ G+C+  +IE A ++   + ++   PD +TY  ++   C+   +E
Sbjct: 282 ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLE 341

Query: 159 SA-FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
            A F + +        P V+TY+I++       +  +A + + EM               
Sbjct: 342 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 401

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK G V  A + ++++ ++  +P V ++N ++  L  +G  +E  KL+  M + GL
Sbjct: 402 IDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 461

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK--------GLTPDAYSYDPLISAYCKD 312
           EP +VTY+ L+    R G+ E A ++    ++K         L P+  ++  LI   CK 
Sbjct: 462 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKA 520

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
             +D A+  ++ + S  C P   +   I+    + G  ++A ++   +S VG
Sbjct: 521 REIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 26/244 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESM-VANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEK 100
           L++    A + +E+ + +E+M  A G  PDVV  + ++  + + ++  +A   + E++ +
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P+   Y++LI G CKA +++ A +VL  + ++   P V T+N +IG+LC  G ++ A
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------ 202
           +K+   +     +P ++TYT L++     G+ + A +L + M                  
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA 509

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   + +A   V  L SR C+P       ++  LL  G+ EE  KL+  + 
Sbjct: 510 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 569

Query: 257 SRGL 260
             GL
Sbjct: 570 KVGL 573


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 232/461 (50%), Gaps = 19/461 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D+++     MV +   P +V  +KL+    +  K +  + + E ++  G   +++ Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I+ FC+ +Q+ LA  +L ++   G+ P +VT N ++   C    I  A  + DQ++  
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             +P  +T+T L+       +  +A+ L++ M                 G+CK+G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              +  +E    + DV+ YN ++  L      ++   L  +M ++G++P+V TY+ LIS 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCLP 332
           LC  G+  DA  +L    EK + PD   ++ LI A+ K+G+L  A +  D M+ S  C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+V YNT++  FCK    ++ +E+F ++S  G   N  +Y T+    + + D   A  + 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+S G+ PD +TYN L+  LC +G V+ A+ +   M+    +  +++Y  +I   CK 
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            ++ +  ++  ++  KG KPN  TY  ++ G    G + EA
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 237/483 (49%), Gaps = 19/483 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F KL+    +  KFD  +   E M   G   ++   +  I  F +  + + A+ ++  +
Sbjct: 77  EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G  P +   N+L++GFC  N+I  A  ++D++   G+ PD VT+  ++  L      
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A  + ++++   C+P ++TY  +I      G+ D A+ LL++M               
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK   +  AF     +E++G +PDV +YN L+  L N G+W +  +L+++M+ + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            P++V ++ LI +  ++GK  +A  +     K K   PD  +Y+ LI  +CK  R++  +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E    M   G + + V Y T++  F +  + D A  +F+++   G  P++ +YN +   L
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            ++G+   AL +   M  + ++ D +TY ++I  LC+ G V++   L   +     +P V
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y  ++ GFC+     E+  +   M E G  PN  TY  LI      G  A + EL   
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556

Query: 500 LVS 502
           + S
Sbjct: 557 MRS 559



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 217/434 (50%), Gaps = 20/434 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
              +  E++  ++ MV  G +PD V  T L+   FQ  K+++AV ++E ++ K  +PD+ 
Sbjct: 157 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y A+I+G CK  + +LA  +L+++       DVV YN +I  LC    ++ AF +F+++
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                KP V TY  LI      G+   A +LL +M                 LE +   P
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-----------------LE-KNINP 318

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           D++ +N L+   +  GK  E EKL  EM+ S+   P+VV Y+ LI   C+  + E+ ++V
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
            R   ++GL  +  +Y  LI  + +    D A      M+SDG  PDI+ YN +L   C 
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NGN + AL +FE +       ++ +Y TM  AL  +G       +   +  KG++P+ +T
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +++S  CR G+ +EA  L V+M+     P   +YN +I    +      S E++  M 
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558

Query: 467 EKGCKPNETTYVLL 480
             G   + +T+ L+
Sbjct: 559 SCGFAGDASTFGLV 572



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 18/430 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S +         + +      F  L+   F+  K  E++  +E MV  GC+PD+V   
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            +I    +  + + A+ ++  +EK   E DV  YN +I G CK   ++ A  + +++ ++
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PDV TYN +I  LC+ G    A ++   +L  N  P ++ +  LI A + EG+  +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
            KL DEM                 ++S+ C PDV++YN L++      + EEG ++  EM
Sbjct: 340 EKLYDEM-----------------VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             RGL  N VTY+ LI    +    ++A  V +     G+ PD  +Y+ L+   C +G +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + A+   +YM       DIV Y T++ A CK G  +   ++F  LS  G  PNV +Y TM
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S     G K  A  +  EM   G  P+  TYN+LI    RDG    +  L+ +M S  F
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562

Query: 436 RPTVISYNII 445
                ++ ++
Sbjct: 563 AGDASTFGLV 572



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 158/312 (50%), Gaps = 9/312 (2%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P ++ ++ LL  +  M K++    L  +M + G+  N+ TYSI I+  CR  +   A+ +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    + G  P   + + L++ +C   R+  A+  +D M+  G  PD V + T++    +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +  A +A+ + E++   GC P++ +Y  + + L   G+   AL ++++M    IE D + 
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN++I  LC+   +D+A  L   ME+   +P V +YN +I   C   R +++  +L+ M 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMH----AISRDT----FKRLNRT 517
           EK   P+   +  LI+     G   EA +L + +V S H     ++ +T    F +  R 
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 518 FPLLDVYKEISH 529
              ++V++E+S 
Sbjct: 373 EEGMEVFREMSQ 384



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 141/267 (52%), Gaps = 1/267 (0%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L R +L   K ++   L  +M+     P++V +S L+S++ +  K +  + +    +  G
Sbjct: 46  LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           ++ + Y+Y   I+ +C+  +L LA+  L  M+  G  P IV  N++L  FC      +A+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +++ ++G  P+  ++ T+   L+       A+ ++  M+ KG +PD +TY ++I+ L
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G  D A+ LL  ME  +    V+ YN II G CK + ++++ ++   M  KG KP+ 
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285

Query: 475 TTYVLLIEGI-GYGGWRAEAMELANAL 500
            TY  LI  +  YG W   +  L++ L
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDML 312



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 75/151 (49%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D A+ +F  +      P++  ++ + SA+         + +  +M + GI  +  TY+  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  CR   +  A+ +L  M    + P++++ N ++ GFC   RI+E++ ++  M E G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +P+  T+  L+ G+      +EA+ L   +V
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMV 207



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 58/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+G+  +M+     P  + ++ L+S + +    D  + L   M++      + +Y+I I 
Sbjct: 59  AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            FC+  +++ ++ +L  M + G  P+  T   L+ G  +G   +EA+ L + +V M
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 222/449 (49%), Gaps = 9/449 (2%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK++++   I  M+  G  PD    +K++       K   A  + E +++ G   DV+ 
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++  FCKA  IE A K  + +R  G +P+VVTY  +I +      +  A ++F+ +L
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P ++TY+ LI      GQ +KA ++ + M  C    V     + +  +    +P+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPN 638

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  LL       + EE  KL+  M   G EPN + Y  LI  LC+ GK ++A +V  
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G     Y+Y  LI  Y K  R DLA + L  M+ + C P++V Y  ++   CK G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A ++ + + + GC PNV +Y  M       G     L ++  M SKG+ P+ +TY 
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C++G +D A  LL +M+ T +      Y  +I GF   +   ES+ +L  + + 
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 876

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              P  + Y LLI+ +     +A+ +E+A
Sbjct: 877 DTAPFLSVYRLLIDNL----IKAQRLEMA 901



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 45/482 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + KLI     A  F+E++ F+  M A  C P+VV  + L+     +++  +  RV+ ++ 
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 100 K---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-- 154
               Y  P +F  N+L+  +C +     A K+L ++   G  P  V YNI+IGS+C    
Sbjct: 365 MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 155 ----GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
                +++ A K + ++L        I  +   +                   +C  G  
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC------------------LCSAGKY 464

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF  +R +  +G  PD  +Y+ +L  L N  K E    L  EM   GL  +V TY+I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + S C+ G  E A       +E G TP+  +Y  LI AY K  ++  A E  + M+S+GC
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKL----------------SDVGCPPNVSSYNT 374
           LP+IV Y+ ++   CK G  ++A +IFE++                 D    PNV +Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +      S     A  ++  M  +G EP++I Y++LI  LC+ G +DEA  +  +M    
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F  T+ +Y+ +I  + K +R + + +VL+ M E  C PN   Y  +I+G+   G   EA 
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 495 EL 496
           +L
Sbjct: 765 KL 766



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 206/434 (47%), Gaps = 39/434 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--- 96
           +  LI    +A K   +    E+M++ GC P++V  + LI    +  +  KA ++ E   
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615

Query: 97  ----------ILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                       ++Y +    P+V  Y AL+ GFCK++++E A K+LD +   G  P+ +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I  LC  G ++ A +V  ++       T+ TY+ LI       + D A K+L +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G   +A++ ++ +E +GCQP+V++Y  ++     +GK 
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E   +L+  M S+G+ PN VTY +LI   C++G  + A ++L   K+         Y  +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  + K+    L +  LD +  D   P +  Y  ++    K    + AL + E+++    
Sbjct: 856 IEGFNKEFIESLGL--LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913

Query: 366 P--PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                 S+YN++  +L  +     A  + SEM  KG+ P+  ++ SLI  L R+  + EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973

Query: 424 VGLLVDMESTRFRP 437
           + LL+D  S    P
Sbjct: 974 L-LLLDFISHMVCP 986



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 171/433 (39%), Gaps = 66/433 (15%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNAL+    + +  ++  + L ++R           N+++   C  G    A +   +L 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P+  TY  LIQA +   + D A  +  EM +    M G                 
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG----------------- 270

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +      +L  +GKW E    +T + +    P+ V Y+ LIS LC     E+A+D L 
Sbjct: 271 -FTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +     P+  +Y  L+       +L      L+ M+ +GC P    +N+++ A+C +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR------ALGMISEMLSKGIEP 402
           +   A ++ +K+   G  P    YN +  ++    D +       A    SEML+ G+  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP------------------------- 437
           ++I  +S   CLC  G  ++A  ++ +M    F P                         
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 438 ----------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V +Y I++  FCK   I ++ +    M E GC PN  TY  LI    + 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI----HA 562

Query: 488 GWRAEAMELANAL 500
             +A+ +  AN L
Sbjct: 563 YLKAKKVSYANEL 575



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 3/243 (1%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G +     Y+ L+  + RD   +   + L+  ++          + L+  +C++G   +A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +E L  +      P    YN ++ AF K    D A  I  ++S      +  +      +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    AL ++    ++   PD + Y  LIS LC   + +EA+  L  M +T   P 
Sbjct: 280 LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++Y+ ++ G    +++     VL  M  +GC P+   +  L+      G  + A +L  
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 499 ALV 501
            +V
Sbjct: 397 KMV 399


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 17/462 (3%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  LI+     G  +++      M  +G  P       +IK    ++    AV + +
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +   G PD F YN LI   C+  +I  A  + +++   G  P +VTY+ ++   C  G 
Sbjct: 377 EMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++ A K++ ++      P V+TYT L++  + +   DKA  LL EM              
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C  G V +  + ++  E+ G  P  ++YN ++   +  G       +  +M ++G
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+VTY+  I   C+    + A+ +L   + KGL PD  +Y+ LI  +C++G +  A+
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + L  M+ DG LP+I  YN+ +  +      ++AL ++EK+   G   + ++Y T+    
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGF 676

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+   AL + SEM++KG  PD IT+ +L   LCR+G +D+A  LL +M     RP V
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           + YN++I G+ +  ++ E+  +   M E+   P++TTY +L+
Sbjct: 737 LMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 230/507 (45%), Gaps = 56/507 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +++  F+ G +D+++   + M A+  +PD  +C+  I    + R +N+A+ V+  ++
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P  F +N+++    K  ++E A  + D L + G    VV    ++   C +  + 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++ LRD   PT +TYT+LI+                  G  ++GM  +A++  R
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIR------------------GCTEEGMPEKAYELCR 341

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G  P    +NM+++ LLN   W++   L  EM   G+ P+  TY+ILI  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV--- 335
           K  +A+++     E G+ P   +Y  L+  YC +G +D A++    M   G  P++V   
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 336 --------------------------------NYNTILAAFCKNGNADQALEIFEKLSDV 363
                                            YNT++   C  G   +  E+ ++    
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P   +YN++ +    +G    A  +  +M +KGI P+ +TY S I   C+    D A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +L D+     RP + +YN +I GFC+   ++ +++VL  M + G  PN + Y   I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 484 IGYGGWRAEAMELANALVSMHAISRDT 510
                   EA+ L   ++    I  DT
Sbjct: 641 YKNLKMMEEALRLYEKMIK-EGIDLDT 666



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 202/440 (45%), Gaps = 19/440 (4%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKAN 120
           SM A G  PD    T L+    +   +  A+ ++  +   G P D + ++ ++    K  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
             + A ++ D + +    PD    ++ I SLC       A  V  ++      P   T+ 
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            ++   +  G+ ++A+ + DE+                 G C +  V +A          
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P  ++Y +L+R     G  E+  +L  +M   GL P+   ++++I  L  D   +DA
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V + +   + G+ PDA++Y+ LI   C+  ++  A+   + M   G  P IV Y+++L  
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +C NG  D+A++++ ++   G  PNV +Y T+     +     +A  +++EM   G+  +
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           + TYN+LI+ LC  G V E   +L   E+  F PT ++YN II GF K   +  +  V  
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  PN  TY   I+G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDG 570



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 99/204 (48%)

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+TPDA S   L++   +      A+  L  M   G   D   ++ ++ A  K G  D 
Sbjct: 136 RGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDD 195

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ +F+++      P+    +   ++L    D  RAL ++ +M   G  P + T+NS++ 
Sbjct: 196 AVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVD 255

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            L + G ++EA+ +  ++ +T  + +V+    ++ G+C  R + +++++       G  P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
            + TY +LI G    G   +A EL
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYEL 339



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 111/230 (48%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M +RG+ P+  + + L++   R     DA+ +L   + KG   DA+ +D ++ A  K+G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D A+   D M +    PD    +  +A+ CK  +A++AL +  K+ D G  P   ++N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L   G    AL +  E+L+ G +   +   +L+   C    V +A+ +  +     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             PT ++Y ++I G  +     ++ E+   M + G  P+   + ++I+G+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 1/118 (0%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            D+    +  LI    + G    +L     MVA G  PD +  T L     +    + A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           ++++ + +    P+V  YN LI+G+ +  +++ A ++ D +  R   PD  TY+I++G
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%)

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  S   + +    S     AL +++EM  KG   D   ++ ++    ++GM D+A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V L  +M ++   P     ++ I   CK R  N ++ VL  M + G  P + T+  +++ 
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 484 IGYGGWRAEAMELANALVS 502
           +  GG   EA+ + + L++
Sbjct: 257 LVKGGRMEEALHIKDELLA 275


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 217/429 (50%), Gaps = 19/429 (4%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
           + M+ +G +P ++    LI    ++ K  +A  ++  + +Y   PDVF Y +LI G C+ 
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
             ++LA  V DR+   G  P+ VTY+ +I  LC+ G ++ A  + ++++    +PTV TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           T+ I A                  +C      +A + V  ++ RGC+P+V +Y  L+  L
Sbjct: 307 TLPITA------------------LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
             +GK E    L  +M+  GL PN VTY+ LI+ LC  G+   A+ +    +  G   + 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I   C  G ++ A+   + M+  G LP +V YNT++  +   GN + A  + + 
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + + GC P+  +YN + S     G    A     EM+  G+ P+ ++Y +LI    +DG 
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD A+ LL  ME     P V SYN +I G  K  R +E+ ++   M E+G  PN  TY  
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 480 LIEGIGYGG 488
           LI+G+   G
Sbjct: 589 LIDGLCRNG 597



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 229/500 (45%), Gaps = 49/500 (9%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI      G+ DE+L  +E M+  G +P V   T  I          +A+ 
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           ++  ++K G  P+V  Y ALISG  +  ++E+A  +  ++   G  P+ VTYN +I  LC
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G   +A K+F  +          TY  +I+   L G  +KAM L ++M          
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G   KG V  A + +  ++  GC+PD  +YN L+      GK E       EM
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  GL PN V+Y+ LI    +DGK + A+ +L+  +E G  P+  SY+ +I+   K+ R 
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF------------------ 357
             A +  D M+  G LP+++ Y T++   C+NG    A +IF                  
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 358 -------------EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
                        E++S++GC P + +Y+T+ S L   G    A  ++ +M  +G  PD 
Sbjct: 625 IYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             Y SL+   C++  VD A+ +   +E+  F+  +  Y  +I   CK  ++ E+  +   
Sbjct: 685 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 744

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M EK    +E  + +L++G+
Sbjct: 745 MLEKEWNADEIVWTVLVDGL 764



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 224/458 (48%), Gaps = 23/458 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    R    D +    + MV  GC P+ V  + LI     E + ++A+ ++E ++
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EP V+ Y   I+  C     E A +++ R++ RG  P+V TY  +I  L   G +E
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  ++ ++L++   P  +TY  LI    + G+   A+K+   M                
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM---------------- 399

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             E  G   +  +YN +++ L   G  E+   L  +M+  G  P VVTY+ LI+     G
Sbjct: 400 --EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              +A  +L   KE G  PD ++Y+ L+S + K G+L+ A  +   M+  G  P+ V+Y 
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K+G  D AL + +++ ++GC PNV SYN + + L        A  +  +M+ +
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+ ITY +LI  LCR+G    A  +  DME  +  P + +Y+ +I G C+  + +E+
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                 M E GC+P   TY  L+ G+   G   EA +L
Sbjct: 638 ----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 212/470 (45%), Gaps = 52/470 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R GK + ++     M+  G  P+ V    LI +     + + A+++   +E
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G   +   YN +I G C    IE A  + +++   G  P VVTYN +I    ++G + 
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A ++ D +  + C+P   TY  L+      G+ + A     EM                
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  K G V  A   ++ +E  GC P+V SYN ++  L    ++ E EK+  +M+ +GL 
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI--------------- 306
           PNV+TY+ LI  LCR+G+T+ A  +    +++   P+ Y+Y  LI               
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM 640

Query: 307 ----------------SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
                           S  C+ GR   A + +  M   G  PD   Y ++L A CKN   
Sbjct: 641 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 700

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D AL+IF  +   G   ++S Y  +  AL  +G    A  +   ML K    DEI +  L
Sbjct: 701 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 760

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +  L ++G +D  + LL  MES  F P + +Y  +ILG  +  RI +SIE
Sbjct: 761 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTY--VILGR-ELSRIGKSIE 807



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 53/431 (12%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +++ N L+    K   +E A  +  ++ + G  P ++T+N +I  L  +G +  A  +  
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           Q+ + +  P V TYT LI                  +G C+   +  AF     +   GC
Sbjct: 223 QIFQYDLSPDVFTYTSLI------------------LGHCRNRNLDLAFGVFDRMVKEGC 264

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------------ 261
            P+ ++Y+ L+  L N G+ +E   ++ EMI +G+E                        
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324

Query: 262 -----------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                      PNV TY+ LIS L R GK E A+ +     ++GL P+  +Y+ LI+  C
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A++   +M   G L +   YN I+   C  G+ ++A+ +FEK+  +G  P V 
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YNT+ +   + G+   A  ++  M   G EPDE TYN L+S   + G ++ A     +M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P  +SY  +I G  K  +++ ++ +L  M E GC PN  +Y  +I G+      
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 491 AEAMELANALV 501
           +EA ++ + +V
Sbjct: 565 SEAEKICDKMV 575



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 150/288 (52%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +   G    + S N LL  L      E    L  +M++ G++P+++T++ LI+ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK  +A  +L    +  L+PD ++Y  LI  +C++  LDLA    D M+ +GC P+ V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++   C  G  D+AL++ E++ + G  P V +Y    +AL +   +  A+ +++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G  P+  TY +LIS L R G ++ A+GL   M      P  ++YN +I   C   R 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++++   M   G   N  TY  +I+G+  GG   +AM L   ++ M
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)

Query: 269 ILISSLCR-DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           IL+   CR + +     D L      G     YS + L+    K   ++ A      M++
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P ++ +NT++    K G   +A  I  ++      P+V +Y ++      + +   
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A G+   M+ +G +P+ +TY++LI+ LC +G VDEA+ +L +M      PTV +Y + I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             C      E+IE++A M ++GC+PN  TY  LI G+   G    A+ L + ++
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 96/197 (48%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  +++   P  +    +I A   +  +    +FL+ +   G    + + NT+L    K 
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 176

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              + A  +++++ + G  P++ ++NT+ + L   G    A  ++S++    + PD  TY
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTY 236

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SLI   CR+  +D A G+   M      P  ++Y+ +I G C   R++E++++L  M E
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296

Query: 468 KGCKPNETTYVLLIEGI 484
           KG +P   TY L I  +
Sbjct: 297 KGIEPTVYTYTLPITAL 313



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G+F E+   ++ M   G  PD  +   L+    +  + + A+++   +E  G +  + 
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI   CKA Q+E A  + D +  + ++ D + + +++  L   G ++   K+   +
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
              N  P + TY IL +     G++ ++  L D++ + K
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 229/470 (48%), Gaps = 9/470 (1%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK++++   I  M+  G  PD    +K++       K   A  + E +++ G   DV+ 
Sbjct: 420 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 479

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++  FCKA  IE A K  + +R  G +P+VVTY  +I +      +  A ++F+ +L
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P ++TY+ LI      GQ +KA ++ + M  C    V     + +  +    +P+
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPN 597

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  LL       + EE  KL+  M   G EPN + Y  LI  LC+ GK ++A +V  
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G     Y+Y  LI  Y K  R DLA + L  M+ + C P++V Y  ++   CK G
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A ++ + + + GC PNV +Y  M       G     L ++  M SKG+ P+ +TY 
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C++G +D A  LL +M+ T +      Y  +I GF   +   ES+ +L  + + 
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 835

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
              P  + Y LLI+ +     +A+ +E+A  L+   A    T    + T+
Sbjct: 836 DTAPFLSVYRLLIDNL----IKAQRLEMALRLLEEVATFSATLVDYSSTY 881



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 45/482 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + KLI     A  F+E++ F+  M A  C P+VV  + L+     +++  +  RV+ ++ 
Sbjct: 264 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 323

Query: 100 K---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-- 154
               Y  P +F  N+L+  +C +     A K+L ++   G  P  V YNI+IGS+C    
Sbjct: 324 MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381

Query: 155 ----GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
                +++ A K + ++L        I  +   +                   +C  G  
Sbjct: 382 SLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC------------------LCSAGKY 423

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF  +R +  +G  PD  +Y+ +L  L N  K E    L  EM   GL  +V TY+I+
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + S C+ G  E A       +E G TP+  +Y  LI AY K  ++  A E  + M+S+GC
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKL----------------SDVGCPPNVSSYNT 374
           LP+IV Y+ ++   CK G  ++A +IFE++                 D    PNV +Y  
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +      S     A  ++  M  +G EP++I Y++LI  LC+ G +DEA  +  +M    
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F  T+ +Y+ +I  + K +R + + +VL+ M E  C PN   Y  +I+G+   G   EA 
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723

Query: 495 EL 496
           +L
Sbjct: 724 KL 725



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 206/434 (47%), Gaps = 39/434 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--- 96
           +  LI    +A K   +    E+M++ GC P++V  + LI    +  +  KA ++ E   
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 574

Query: 97  ----------ILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                       ++Y +    P+V  Y AL+ GFCK++++E A K+LD +   G  P+ +
Sbjct: 575 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 634

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I  LC  G ++ A +V  ++       T+ TY+ LI       + D A K+L +M
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+CK G   +A++ ++ +E +GCQP+V++Y  ++     +GK 
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E   +L+  M S+G+ PN VTY +LI   C++G  + A ++L   K+         Y  +
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  + K+    L +  LD +  D   P +  Y  ++    K    + AL + E+++    
Sbjct: 815 IEGFNKEFIESLGL--LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 872

Query: 366 P--PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                 S+YN++  +L  +     A  + SEM  KG+ P+  ++ SLI  L R+  + EA
Sbjct: 873 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932

Query: 424 VGLLVDMESTRFRP 437
           + LL+D  S    P
Sbjct: 933 L-LLLDFISHMVCP 945



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 171/433 (39%), Gaps = 66/433 (15%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNAL+    + +  ++  + L ++R           N+++   C  G    A +   +L 
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLK 186

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P+  TY  LIQA +   + D A  +  EM +    M G                 
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG----------------- 229

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +      +L  +GKW E    +T + +    P+ V Y+ LIS LC     E+A+D L 
Sbjct: 230 -FTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 285

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +     P+  +Y  L+       +L      L+ M+ +GC P    +N+++ A+C +G
Sbjct: 286 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR------ALGMISEMLSKGIEP 402
           +   A ++ +K+   G  P    YN +  ++    D +       A    SEML+ G+  
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP------------------------- 437
           ++I  +S   CLC  G  ++A  ++ +M    F P                         
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 465

Query: 438 ----------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V +Y I++  FCK   I ++ +    M E GC PN  TY  LI    + 
Sbjct: 466 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI----HA 521

Query: 488 GWRAEAMELANAL 500
             +A+ +  AN L
Sbjct: 522 YLKAKKVSYANEL 534



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 3/243 (1%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G +     Y+ L+  + RD   +   + L+  ++          + L+  +C++G   +A
Sbjct: 119 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIA 178

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +E L  +      P    YN ++ AF K    D A  I  ++S      +  +      +
Sbjct: 179 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 238

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    AL ++    ++   PD + Y  LIS LC   + +EA+  L  M +T   P 
Sbjct: 239 LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 295

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++Y+ ++ G    +++     VL  M  +GC P+   +  L+      G  + A +L  
Sbjct: 296 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 355

Query: 499 ALV 501
            +V
Sbjct: 356 KMV 358


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 246/505 (48%), Gaps = 40/505 (7%)

Query: 51  GKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           G+ +E+L  + + M   GC P+VV    L+  F +  + + A R++ ++ + G  P +  
Sbjct: 168 GQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVT 227

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N +++G CKA ++E A K+ D +   G +PD V+YN ++   C  G +  A  VF ++ 
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P V+T+T LI A    G  ++A+ L+ +M                 G C+ G + 
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A   ++ +     QP V+ YN+L+     +G+ +E  +L+ EM ++G++P+VVTYS ++
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C+ G T+ A ++ R   +KG+ PDA +Y  LI   C++ RL  A E  + M+  G  
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y T++   CK GN  +AL + +++   G  P+V +Y+ +   L  S     A  +
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 392 ISEMLSKGIEPDEITYNSLISCLCR----------------DGMVDEAVGLLVDMESTRF 435
           + ++  +   PD I Y +L+ C CR                 G++++A  +   M    +
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA-- 493
           +     Y+++I G C+   I +++     +   G  PN T+ + L+ G+   G   EA  
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADN 646

Query: 494 --MELANALVSMHAISRDTFKRLNR 516
              EL N      A +      LNR
Sbjct: 647 VIQELLNCCSLADAETSKALIDLNR 671



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 219/426 (51%), Gaps = 20/426 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG-EPDVFAYNALISGF 116
            + SM+ +G  P+V     L++      +  +A+ V+ + +   G  P+V  YN L++ F
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           C+A +++ A +++  +R  G  P +VT+N ++  LC  G +E A K+FD++ R+   P  
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDG 260

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           ++Y  L+                   G CK G + +A      +  +G  PDV+++  L+
Sbjct: 261 VSYNTLVS------------------GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLI 302

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             +   G  E    L+ +M  RGL  N  T++ LI   CR+G  +DA+  ++  +E  + 
Sbjct: 303 HAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQ 362

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P    Y+ LI+ YCK GR+D A E +  M + G  PD+V Y+TIL+ +CK G+ D A E+
Sbjct: 363 PSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFEL 422

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             K+   G  P+  +Y+++   L        A  +  +ML  G++PDE TY +LI   C+
Sbjct: 423 NRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCK 482

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           +G V +A+ L  +M      P V++Y+++I G  K+ R  E+  +L  ++ +   P+   
Sbjct: 483 EGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIK 542

Query: 477 YVLLIE 482
           Y  L+ 
Sbjct: 543 YEALMH 548



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 208/411 (50%), Gaps = 19/411 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + AYNA++     A+ +  A ++L  +   G +P+V TYNI++ +LC+RG  E A  V
Sbjct: 118 PSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 164 FDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
               +R   C P V+TY  L+ A    G+ D A +L+  M                 G+C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G +  A +    +   G  PD +SYN L+      G   E   +  EM  +G+ P+VV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ LI ++CR G  E AV ++   +E+GL  + +++  LI  +C++G LD A+  +  M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
                 P +V YN ++  +CK G  D+A E+  ++   G  P+V +Y+T+ S     GD 
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +  +ML KG+ PD ITY+SLI  LC +  + +A  L   M     +P   +Y  +
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I G CK   + +++ +   M +KG  P+  TY +LI+G+       EA  L
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 188/349 (53%), Gaps = 18/349 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G++P ++ YN ++ +L S   + SA ++   +LRD   P V TY IL++A    GQ ++A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           +           G+VG        +   GC P+V++YN L+      G+ +  E+L+  M
Sbjct: 174 L-----------GVVGD------DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM 216

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ P++VT++ +++ LC+ G+ EDA  +      +GLTPD  SY+ L+S YCK G L
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCL 276

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+     M   G +PD+V + +++ A C+ GN ++A+ +  ++ + G   N  ++  +
Sbjct: 277 HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 +G    AL  + EM    I+P  + YN LI+  C+ G +DEA  L+ +ME+   
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGM 396

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +P V++Y+ I+ G+CK    + + E+   M +KG  P+  TY  LI G+
Sbjct: 397 KPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGL 445



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 34/388 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    RAG  + ++  +  M   G + +    T LI  F +    + A+  M E+ 
Sbjct: 298 FTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMR 357

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E   +P V  YN LI+G+CK  +++ A +++  + ++G  PDVVTY+ ++   C  G  +
Sbjct: 358 ECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTD 417

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF++  ++L+    P  ITY+ LI+                  G+C++  +G A +   
Sbjct: 418 SAFELNRKMLKKGVVPDAITYSSLIR------------------GLCEERRLGDACELFE 459

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G QPD  +Y  L+      G  ++   L  EMI +G+ P+VVTYS+LI  L +  
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPL---------------ISAYCKDGRLDLAIEFLD 323
           +T++A  +L     +   PD   Y+ L               +  +   G ++ A +   
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQ 579

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+      D   Y+ ++   C+ GN  +AL   ++L   G  PN +S  ++   L+  G
Sbjct: 580 SMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLI 411
             + A  +I E+L+     D  T  +LI
Sbjct: 640 MTVEADNVIQELLNCCSLADAETSKALI 667



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 20/210 (9%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  R+  + E       L     E  +  LI    + G   ++L   + M+  G  PDVV
Sbjct: 447 EERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVV 506

Query: 74  MCTKLIKKFFQERKSNKAVRVMEILEKYGE---PDVFAYNAL---------------ISG 115
             + LI    +  ++ +A R++   + Y E   PD   Y AL               + G
Sbjct: 507 TYSVLIDGLSKSARTKEAQRLL--FKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKG 564

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F     +  A+KV   +  R +  D   Y+++I   C  G I  A     QLLR    P 
Sbjct: 565 FSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPN 624

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMC 205
             +   L++    EG T +A  ++ E+  C
Sbjct: 625 STSTISLVRGLFEEGMTVEADNVIQELLNC 654


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 235/458 (51%), Gaps = 17/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    +G  +++      M  NG  P V     L++ + +     +A ++ +     G
Sbjct: 366 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             ++F YN ++S  CK  +++ A  +LD + ++G  P+VV+YN MI   C +G ++ A  
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           VF  +L  + KP V+TY+ILI     +G ++KA+ L D+M                 G+C
Sbjct: 486 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A   +++    G  P  ++YN ++   +  G  +    +  EM   G+ PNVV
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI+  C+  + + A+      +EKGL  D  +Y  LI  +CK   ++ A +    +
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  P+ + YN++++ F    N + AL  ++K+ +   P ++ +Y T+   L   G  
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  +  EMLSKGI PD IT++ L++ LC  G ++ A  +L +M+     P+V+ YN +
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I G+ +   + E+  +   M ++G  P++ TY +LI G
Sbjct: 786 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 227/478 (47%), Gaps = 31/478 (6%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV----VMCTKLIKK-FFQE 85
             F++    F  L+    RA + + ++    +M+     P V    ++ T L+++    E
Sbjct: 144 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGE 203

Query: 86  RKS--NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            +   NK V    +   YG  D F  + ++    K  ++E A +     + RG   D   
Sbjct: 204 LRDLYNKMV----LRGIYG--DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 257

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM- 202
           Y+I+I ++C +       ++ +++      P+  T+T +I A + +G   +A++L +EM 
Sbjct: 258 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G C +G +  A      +   G  P+ ++Y++L+    N G  E
Sbjct: 318 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +  +L T+M   G+ P+V   + L+    +    E+A  +   A + G+  + ++Y+ ++
Sbjct: 378 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMM 436

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           S  CK G++D A   LD M++ G +P++V+YN ++   C+ GN D A  +F  +      
Sbjct: 437 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 496

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV +Y+ +    +  GD  +AL +  +MLS  I P + T+N++I+ LC+ G + EA   
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           L +     F P+ ++YN I+ GF K   I+ ++ V   M E G  PN  TY  LI G 
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 614



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 198/434 (45%), Gaps = 52/434 (11%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N  +SG    + +   + +++  +   F  D   +N ++ +      IE+A   F+ ++ 
Sbjct: 119 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 178

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            +  P V    IL+ A                  + ++ M+G+       +  RG   D 
Sbjct: 179 QDVIPWVPYMNILLTA------------------LVRRNMIGELRDLYNKMVLRGIYGDH 220

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            + ++++R  L  G+ EE E+   E   RG++ +   YSI+I ++C+   +   +++L  
Sbjct: 221 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 280

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            KE+G  P   ++  +I A    G +  A+   + MI+ G   ++V   +++  +C  GN
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP------- 402
            D AL +F K+++ G  PN  +Y+ +     +SG+  +A  + ++M   GI P       
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400

Query: 403 ------------------DE---------ITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                             DE          TYN ++S LC+ G +DEA  LL +M +   
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V+SYN +ILG C+   ++ +  V + M  +  KPN  TY +LI+G    G   +A++
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 496 LANALVSMHAISRD 509
           L + ++S++    D
Sbjct: 521 LFDQMLSLNIAPTD 534


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 248/487 (50%), Gaps = 25/487 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--I 97
           +  L+    +AGKFDE+   +  MVA GC PD V  + LI    +     +A RV+E  I
Sbjct: 129 YTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 188

Query: 98  LEKYGEPDVFAYNALISGFC-KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
               G  D  A+  +I   C K N +ELA+KVL  + ++GF+P V+ +N++I   C    
Sbjct: 189 QRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++SA+K+ + ++   C P V T+TILI       +  +A +LL++M              
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK+G V  A++  + +E R C P+V+++N+L+  L    + EE  +L   M   G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDAYSYDPLISAYCKDGRLDLA 318
             P+++TY+ LI  LC+  + ++A  + +   E G++  +A +Y  L   Y   GR+  A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 ++  G  PD+  Y +++  +CK   A + +E+ E+++  G PP V++ + +   
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL---VDMESTRF 435
           L+      RA+ +   M ++G   D + YN ++  + R    D+A+ +L   +D    +F
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P+  + + ++   C+  + +++ ++L  M E+G     ++Y  L+ G+       EA +
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607

Query: 496 LANALVS 502
           +  A+VS
Sbjct: 608 VFEAMVS 614



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 236/478 (49%), Gaps = 19/478 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  D ++  +E M ++G + + V+ T L+K      +  +A+     + K  
Sbjct: 63  LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 122

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  Y AL+   CKA + + A  +L  + ++G +PD VT++ +I  LC  G  E AF+
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182

Query: 163 VFDQLLRDNCKPTVITYTILIQ-----------------ATMLEGQTDKAMKL-LDEMGM 204
           V + +++     +   +  +IQ                   + +G T   +   L   G 
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   +  A++ +  +  +GC P+V ++ +L+  L    +  E ++L+ +M+  G  PNV
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTYS +I+ LC+ G+ +DA ++ +  + +   P+  +++ LI   CK  R++ A +    
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC-PPNVSSYNTMFSALWSSG 383
           M   GC PDI+ YN+++   CK+   D+A ++F+ + + G    N  +Y+T+F    + G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  + S ++ KG  PD  TY SLI   C+     E V L+ +M S  F P V + +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ G  +      +I++  +M  +GC  +   Y L++EG+       +A+ +   ++
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVI 540



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 200/397 (50%), Gaps = 20/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y  LI GF  A  +++A ++L+ ++S GF  + V +  ++  LC  G +  A + 
Sbjct: 55  PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  + +D C P V+TYT L+ A    G+ D+A  +L EM                 G+CK
Sbjct: 115 FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN-MGKWEEGEKLMTEMISRGLEPNVV 265
            G   QAF+ +  +  RG      ++  +++ L N     E   K++  +I++G  P V+
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            ++++I+  C+    + A  +L    EKG  P+ +++  LI+  CK  R+  A + L+ M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  GC P++V Y+T++   CK G  D A E+F+ +    CPPNV ++N +   L  +   
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNI 444
             A  +   M   G  PD ITYNSLI  LC+   VDEA  L   + ES       ++Y+ 
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 413

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +  G+    R+ ++  + + + +KG  P+  TY  LI
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 219/439 (49%), Gaps = 23/439 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFCKANQ 121
           ++A G  P V+M   +I  F + +  + A +++E++ EK   P+VF +  LI+G CKAN+
Sbjct: 223 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR 282

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A ++L+++   G SP+VVTY+ +I  LC +G ++ A+++F  + R NC P V+T+ I
Sbjct: 283 VGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNI 342

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI                   G+CK   + +A Q    +   GC PD+I+YN L+  L  
Sbjct: 343 LID------------------GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 242 MGKWEEGEKLMTEMISRGLE-PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             + +E  +L   +   G+   N VTYS L       G+  DA  +     +KG +PD  
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI  YCK  R    +E ++ M S G  P +   + +L    +  + ++A+++F+ +
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 504

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK---GIEPDEITYNSLISCLCRD 417
           +  GC  +   YN +   +  +    +AL ++ +++ K      P     ++L+  LC+ 
Sbjct: 505 AARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 564

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D+A  LL  M    F   V SYN ++ G  + +R +E+ +V  AM   G  P  +T 
Sbjct: 565 GKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 624

Query: 478 VLLIEGIGYGGWRAEAMEL 496
            ++I  +       +A EL
Sbjct: 625 NVVISWLCSAAKVDDAYEL 643



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 203/392 (51%), Gaps = 20/392 (5%)

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           EL     D  RSR    +V + N  +  LC     + A  +F   +   C P   TY IL
Sbjct: 5   ELVLLFFDWARSR-VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGIL 63

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I+     G  D A++LL+EM                 G+C  G V +A +  R++ ++ C
Sbjct: 64  IRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDC 122

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            PDV++Y  L+  L   GK++E + ++ EM+++G  P+ VT+S LI  LC+ G  E A  
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYC-KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           VL    ++G+     +++ +I   C K   ++LA + L  +I+ G  P ++ +N ++  F
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK  + D A ++ E + + GC PNV ++  + + L  +     A  ++ +M+  G  P+ 
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY+++I+ LC+ G VD+A  L   ME     P V+++NI+I G CK +RI E+ ++   
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           M E GC P+  TY  LI+G+       EA +L
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 202/431 (46%), Gaps = 58/431 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +A +  E+   +E MV  GC P+VV  + +I    ++ + + A  + +++E
Sbjct: 270 FTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 329

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    P+V  +N LI G CKA +IE A ++  R+R  G +PD++TYN +I  LC    ++
Sbjct: 330 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 389

Query: 159 SAFKVFDQL-------------------------LRDNCK-----------PTVITYTIL 182
            AF++F  +                         + D C+           P + TYT L
Sbjct: 390 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I       +  + ++L++EM                 G+ +     +A Q   S+ +RGC
Sbjct: 450 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 509

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS---RGLEPNVVTYSILISSLCRDGKTED 282
             D + YN+++  +    K ++   ++ ++I    R   P+      L+ SLC+ GKT+D
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +L    E+G      SY+ L+S   +  R D A +  + M+S G  P+I   N +++
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C     D A E+ +++S +GC P++ + NT+      SG    A  ++ EM   G+EP
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689

Query: 403 DEITYNSLISC 413
           ++ T++ L+ C
Sbjct: 690 NDTTHD-LLEC 699



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 2/275 (0%)

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V S N  L  L  + + +E   L    ++R   PN  TY ILI      G  + A+ +L
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  G   +A  +  L+   C  GR+  A+E    M  D C PD++ Y  ++ A CK 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKA 139

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A  +  ++   GC P+  +++T+   L   G + +A  ++ +++ +G+   +  +
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 408 NSLISCLC-RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            ++I  LC +   V+ A  +L  + +  F PTV+ +N++I GFCK + ++ + ++L  M 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           EKGC PN  T+ +LI G+       EA +L   +V
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    + + +L+    R  ++DE+    E+MV+ G  P++     +I       K + A 
Sbjct: 582 FAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAY 641

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
            +++ + K G  PD+   N LI G+CK+ + +LA K+L+ +   G  P+  T++++
Sbjct: 642 ELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 238/502 (47%), Gaps = 55/502 (10%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           ++ L   + M+ +   PDV  C ++++    +   +KAV V   + ++G +P +  YN L
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +  +CK  +++    +L  ++ RG +P+ VTYN++I  L  +G  E A  +  ++L+   
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           K +  TY  LI     +G   +A+ L +EM                 G+CK G +  A Q
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 360

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  + +    PDV+SYN L+     +G   +   L  E+ S  L P +VTY+ L+  LC
Sbjct: 361 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 420

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC----- 330
           R G+ E A  +      +G+ PD  +Y  L++  CK G L +A EF D M+ +G      
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480

Query: 331 ------------------------------LPDIVNYNTILAAFCKNGNADQALEIFEKL 360
                                          PD++ YN ++   CK GN ++A E+ +K+
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  P+  +Y ++  A   +G   +   +  EMLSKG+ P  +TY  LI      G +
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           + A     +M+     P VI+YN +I G CK RR++++    A M EKG  PN+ +Y +L
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660

Query: 481 I-EGIGYGGWRAEAMELANALV 501
           I E    G W+ EA+ L   ++
Sbjct: 661 INENCNMGNWQ-EALSLYKQML 681



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 18/401 (4%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVR 93
           V    +  LI   F  G   E+L   E MV  G  P V      I    +  R S+   +
Sbjct: 302 VSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 361

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + ++L     PDV +YN LI G+C+   +  A  + D LRS    P +VTYN ++  LC 
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
           +G +E A ++  +++ +   P ++TYTIL+  +   G    A +  DEM           
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G  K G   +AF     + ++G  PD+I YN+++  L  +G  EE  +L+ +M+
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S G+ P+ VTY+ +I +   +G+     ++      KGLTP   +Y  LI  +   GRL+
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A  +   M   G LP+++ YN+++   CK    DQA   F ++ + G  PN  SY  + 
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +   + G+   AL +  +ML +G++PD  T+++L+  L +D
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 53/416 (12%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           E  V   + LI  + K + +E    V D++     SPDV   N ++  L  + ++  A +
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V+  +     KPT++TY  L+ +                   CK G V Q    +  ++ 
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDS------------------YCKGGKVQQGLDLLSEMQR 262

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RGC P+ ++YN+L+  L   G++E+ + L+ EM+  GL+ +  TY+ LI      G   +
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +      KG +P   +Y+  I   CK GR+  A++ L  M+++  LPD+V+YNT++ 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +C+ GN  +A  +F++L  +   P + +YNT+   L   G+   A  +  EM+++GI P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 403 DEITYNSLISCLCR-----------DGMVDE------------------------AVGLL 427
           D +TY  L++  C+           D M+ E                        A  L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +M +  F P +I YN+++ G CK   + E+ E+L  M   G  P+  TY  +I  
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 18/286 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ + +      M+  G  PD+V  T L+    +    + A     E+L +  E D +
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY   I G  K      A  + + + ++GF PD++ YN+++  LC  G +E A ++  ++
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + D   P  +TYT +I A +  G+  K  ++  EM                 G   KG +
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF +   ++ +G  P+VI+YN L+  L  + + ++      EM+ +G+ PN  +Y+IL
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           I+  C  G  ++A+ + +   ++G+ PD+ ++  L+    KD +L 
Sbjct: 661 INENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 18/257 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           L+  S + G    +  F + M+  G + D       I    +   +++A  + E +L K 
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+  YN ++ G CK   +E A+++L ++ S G  PD VTY  +I +    G +    
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F ++L     P+V+TYT+LI     +G+ ++A     EM                 G+
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   + QA+ F   +  +G  P+  SY +L+    NMG W+E   L  +M+ RG++P+ 
Sbjct: 630 CKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689

Query: 265 VTYSILISSLCRDGKTE 281
            T+S L+  L +D K +
Sbjct: 690 CTHSALLKQLGKDCKLQ 706


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 204/410 (49%), Gaps = 17/410 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +  ++    K      A  +  ++  +G  PD+VT +I+I   C  G +  +F V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P  I  T L++   L+G+  K++   D++                 G+CK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + +R +E R  +PDV+ YN ++  L       E     TEM SRG+ P+V+T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS LI   C  G+   A  +L     K + PD Y+Y  LI A CK+G+L  A   L  M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            +G  P++V Y+T++  +C  G    A +IF  +      P+V SYN M + L       
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ EML K + P+ +TYNSLI  LC+ G +  A+ L+ ++        VI+Y  ++
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G CK + ++++I +   M E+G +PN+ TY  LI+G+  G     A +L
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 224/446 (50%), Gaps = 28/446 (6%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +PNT +L+          L+K     G+  +SL+F + +VA G + + V    L+    +
Sbjct: 199 QPNTIILT---------TLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 85  ERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             ++  A++++ ++E +   PDV  YN +I G CK   +  A      + SRG  PDV+T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y+ +I   C  G +  AF + +++   N  P V TYTILI A                  
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA------------------ 351

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK+G + +A   +  +   G +P+V++Y+ L+     +G+    +++   M+   + P+
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V +Y+I+I+ LC+    ++A+++LR    K + P+  +Y+ LI   CK GR+  A++ + 
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            +   G   D++ Y ++L   CKN N D+A+ +F K+ + G  PN  +Y  +   L    
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGA 531

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +   +L KG   D  TYN +I  LC++GM+DEA+ +   ME     P  +++ 
Sbjct: 532 RLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFE 591

Query: 444 IIILGFCKTRRINESIEVLAAMFEKG 469
           III    +    +++ ++L  M  KG
Sbjct: 592 IIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 224/449 (49%), Gaps = 18/449 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P ++   K++    + +    A+ + + +E  G EPD+   + LI+ FC   Q+  +  V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L ++   G+ P+ +    ++  LC +G ++ +    D+++    +   ++Y  L+     
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G+T  A+KLL  +                 G+CK  +V +A+ F   + SRG  PDVI+
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ L+      G+      L+ EM  + + P+V TY+ILI +LC++GK ++A ++L    
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G+ P+  +Y  L+  YC  G +  A +    M+     P + +YN ++   CK  + D
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ +  ++      PN  +YN++   L  SG    AL ++ E+  +G   D ITY SL+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC++  +D+A+ L + M+    +P   +Y  +I G CK  R+  + ++   +  KGC 
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +  TY ++I G+   G   EA+ + + +
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKM 578



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 216/435 (49%), Gaps = 19/435 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+   S   +  ++  G +P+ ++ T L+K    + +  K++   + +   G + +  +Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             L++G CK  +   A K+L  +  R   PDVV YN +I  LC   ++  A+  + ++  
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P VITY+ LI    L GQ   A  LL+EM +                  +   PDV
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL------------------KNINPDV 342

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y +L+  L   GK +E + L+  M   G++PNVVTYS L+   C  G+  +A  +  A
Sbjct: 343 YTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHA 402

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             +  + P   SY+ +I+  CK   +D A+  L  M+    +P+ V YN+++   CK+G 
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              AL++ ++L   G P +V +Y ++   L  + +  +A+ +  +M  +GI+P++ TY +
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  LC+   +  A  L   +        V +YN++I G CK   ++E++ + + M + G
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582

Query: 470 CKPNETTYVLLIEGI 484
           C P+  T+ ++I  +
Sbjct: 583 CIPDAVTFEIIIRSL 597



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 190/386 (49%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  L+    + G+   ++  +  +     +PDVVM   +I    +++  N+A 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
                +   G  PDV  Y+ LI GFC A Q+  A  +L+ +  +  +PDV TY I+I +L
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  +   + ++  KP V+TY+ L+    L G+   A ++   M         
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK   V +A   +R +  +   P+ ++YN L+  L   G+      LM E
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           +  RG   +V+TY+ L+  LC++   + A+ +    KE+G+ P+ Y+Y  LI   CK  R
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR 532

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A +   +++  GC  D+  YN ++   CK G  D+AL +  K+ D GC P+  ++  
Sbjct: 533 LKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEI 592

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  +L+   +  +A  ++ EM++KG+
Sbjct: 593 IIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    + +E +G +PD+++ ++L+    ++G+      ++ +++  G +PN +  + L+ 
Sbjct: 151 AISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMK 210

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC  G+ + ++        +G   +  SY  L++  CK G    AI+ L  +      P
Sbjct: 211 GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+V YNTI+   CK+   ++A + + +++  G  P+V +Y+T+      +G  + A  ++
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           +EM  K I PD  TY  LI  LC++G + EA  LL  M     +P V++Y+ ++ G+C  
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR---- 508
             ++ + ++  AM +    P+  +Y ++I G+  G    EAM L   ++  + +      
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450

Query: 509 ----DTFKRLNRTFPLLDVYKEISH 529
               D   +  R    LD+ KE+ H
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHH 475



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 179/401 (44%), Gaps = 33/401 (8%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT------- 186
           ++G  P++VT +I+I  L   G +  +F V  ++L+   +P  IT T L++         
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKL 63

Query: 187 --MLEGQTDKAMKLL-----DEMGMCKKGMVGQAFQFVRSLESRGCQ------------- 226
             M+E ++ + +  L       +      +    F F    +                  
Sbjct: 64  PRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGM 123

Query: 227 ------PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
                 P +I +  +L +L+ M  +     L  +M  +G+EP++VT SILI+  C  G+ 
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
             +  VL    + G  P+      L+   C  G +  ++ F D +++ G   + V+Y T+
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L   CK G    A+++   + D    P+V  YNT+   L        A    +EM S+GI
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD ITY++LI   C  G +  A  LL +M      P V +Y I+I   CK  ++ E+  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +L  M ++G KPN  TY  L++G    G    A ++ +A+V
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 141/300 (47%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+   +   +  M      PDV   T LI    +E K  +A  ++ ++ K G +P+V  
Sbjct: 320 AGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVT 379

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+ G+C   ++  A ++   +     +P V +YNIMI  LC    ++ A  +  ++L
Sbjct: 380 YSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREML 439

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
             N  P  +TY  LI      G+   A+ L+ E+                 G+CK   + 
Sbjct: 440 HKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLD 499

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ RG QP+  +Y  L+  L    + +  +KL   ++ +G   +V TY+++I
Sbjct: 500 KAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMI 559

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC++G  ++A+ +    ++ G  PDA +++ +I +  +    D A + L  MI+ G L
Sbjct: 560 GGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 224/464 (48%), Gaps = 18/464 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           F  LIK      + DE+     +M   G  P +  C  L+  F +  ++  A V   E+ 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               +  V+ +N +I+  CK  +++ A   +  + + G  P++VTYN ++   CS G +E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A  +   + R   +P   TY  LI     +G+ ++A K+ +EM                
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C KG +  A  +   +  +G  P + +YN L+  L    + +E E ++ E+  +G+ 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +TY+ILI+  CR    + A  +       G+ P   +Y  L+    K  R+  A + 
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              + S+G LPD + +N ++   C N N   A E+ + +  +  PP+  ++NT+      
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +  EM  +GI+PD I++N+LIS   R G + +A  +  +M  T F PTV++
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           YN ++ G CK +  + + E+L  M  KG  P++TTY  LIEGI 
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 207/411 (50%), Gaps = 19/411 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  ++  F+  M  +G KP++V    ++  +    +   A  ++  +++   EPD F
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y +LISG CK  ++E A+K+ + +  +G  P  V YN +I   C++G ++ A    D++
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+    PT+ TY  LI A  +E +TD+A  ++ E                  ++ +G  P
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE------------------IQEKGISP 394

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D I+YN+L+         ++   L  EM++ G++P   TY+ L+  L +  + ++A D+ 
Sbjct: 395 DAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +    +G+ PDA  ++ LI  +C +  +  A E L  M      PD V +NTI+   C+ 
Sbjct: 455 KKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCRE 514

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++A E+F+++   G  P+  S+NT+ S     GD   A  + +EML  G  P  +TY
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTY 574

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           N+L+  LC++   D A  LL +M S    P   +Y  +I G  K    +E+
Sbjct: 575 NALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDEN 625



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 18/398 (4%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++ G      ++ LI   C  N+ + A +    ++ +G  P + T N ++         E
Sbjct: 144 DRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A+ ++ ++ R   K +V T+ I+I                    +CK+G + +A  FV 
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINV------------------LCKEGKLKKAKDFVG 245

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +E+ G +P++++YN ++    + G+ E  + ++T M  + +EP+  TY  LIS +C+ G
Sbjct: 246 HMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQG 305

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + E+A  +     +KGL P A  Y+ LI  +C  G LD+A  + D M+  G  P +  YN
Sbjct: 306 RLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYN 365

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++ A       D+A  + +++ + G  P+  +YN + +      +  +A  +  EML+ 
Sbjct: 366 SLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS 425

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI+P + TY SL+  L +   + EA  L   + S    P  I +N +I G C    +  +
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGA 485

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+L  M      P+E T+  +++G    G   EA EL
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C      +AF+   +++ +G  P + + N LL   L + + E    L  EM    ++ +V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++I+I+ LC++GK + A D +   +  G+ P+  +Y+ ++  YC  GR++ A   L  
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M      PD   Y ++++  CK G  ++A +IFE++   G  P+   YNT+     + G+
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A     EML KGI P   TYNSLI  L  +   DEA  ++ +++     P  I+YNI
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I G+C+     ++  +   M   G KP + TY  L+  +       EA +L   + S
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 21/210 (10%)

Query: 30  LLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +L+  +K T+  +  L+    +  +  E+    + + + G  PD +M   LI        
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
              A  +++ +++    PD   +N ++ G C+  ++E A ++ D ++ RG  PD +++N 
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I     RG I+ AF+V +++L     PTV+TY  L+Q                  G+CK
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ------------------GLCK 583

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
                 A + ++ + S+G  PD  +Y  L+
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 232/458 (50%), Gaps = 19/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+     PDVV  + +I    + +  +KA+ V+  + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++RS G  PDVVTYN ++  LC  G   
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   +P + TY  L+Q    +G   +   LLD M              VR
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM--------------VR 364

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  PD   +N+L+       K +E   + ++M   GL PNVVTY  +I  LC+ G
Sbjct: 365 N----GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +DA+       ++GLTP+   Y  LI + C   + D A E +  M+  G   + + +N
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  PNV +Y+T+      +G    A  ++S M S 
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  CR   +D+A+ L  +M S+   P +I+YNII+ G   TRR   +
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+   + + G +   +TY +++ G+       EA+ +
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 242/479 (50%), Gaps = 28/479 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + ++V  G + + +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 99  RAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI--VLRRMTELSCMP 156

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           DVF+   L+ G C  N+ + A ++L  +   R  G +PDVV+Y  +I      G  + A+
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM-----------------G 203
             + ++L     P V+TY+ +I A + +GQ  DKAM++L  M                 G
Sbjct: 217 STYHEMLDRRISPDVVTYSSII-AALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C      +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGLEP+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY  L+      G   +   +L      G+ PD + ++ LI AY K  ++D A+    
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G  P++V Y  ++   CK+G+ D A+  FE++ D G  PN+  Y ++  +L    
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A  +I EML +GI  + I +NS+I   C++G V E+  L   M     +P VI+Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +I G+C   +++E+ ++L++MF  G KP+  TY  LI G        +A+ L   +VS
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 16/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C+A +++L    L  +  +GF  + +T+  ++  LC+      A   
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++   +C P V + TIL++    E ++ +A++LL  M   + G              
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG-------------- 190

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV+SY  ++      G  ++      EM+ R + P+VVTYS +I++LC+    + 
Sbjct: 191 -GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL    + G+ P+  +Y+ ++  YC   +   AI FL  M SDG  PD+V YN+++ 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG + +A +IF+ ++  G  P++++Y T+     + G  +    ++  M+  GI P
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N LI    +   VDEA+ +   M      P V++Y  +I   CK+  +++++   
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G  PN   Y  LI  +
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSL 451



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P V +Y +L+      G+ + G   +  ++ +G     +T++ L+  LC D +T DA+D 
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E    PD +S   L+   C + R   A+E L  M  D   G  PD+V+Y T++ 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D    P+V +Y+++ +AL       +A+ +++ M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TYNS++   C      EA+G L  M S    P V++YN ++   CK  R  E+ ++ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G +P+  TY  L++G    G          ALV MHA+
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKG----------ALVEMHAL 358



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP  ++Y 
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDG---------------------------------- 329
            LI   C+ GRLDL    L  ++  G                                  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 330 --CLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
             C+PD+ +   +L   C    + +ALE+   ++D    G  P+V SY T+ +  +  GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML + I PD +TY+S+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +++
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 236/503 (46%), Gaps = 55/503 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  L+    R G   ++   +ESM A G +PD+     L     Q  K ++A R+ +
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKD 337

Query: 97  ILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            +E+ G   PDV  YN L+    K      A ++L+ +R +G  P +VT+NI++ SLC  
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +E A    +++  +   P VITY  LI A    G   KA  L+DEM            
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                 +CK      A + + S   RG  PD +SY  ++         E   +L  +MI 
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R L P++ TY+ LI  LCR  + ++A+D L    EKGL PD  +Y+ +I AYCK+G L+ 
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A  F + M+ +   PD+V  NT++   C +G  D+AL++FE   + G   +V +YNT+  
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQ 637

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL---------- 427
           ++   GD   AL    +M  KG++PD  TYN ++S L   G  +EA  +L          
Sbjct: 638 SMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS 697

Query: 428 ---------------VDMESTRFRPTVIS-----------YNIIILGFCKTRRINESIEV 461
                           D++    +P   S           Y   + G C   ++ E+  V
Sbjct: 698 QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAV 757

Query: 462 LAAMFEKGCKPNETTYVLLIEGI 484
           L  M +KG   + +TY+ L+EG+
Sbjct: 758 LDEMMQKGMPVDCSTYITLMEGL 780



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 244/518 (47%), Gaps = 27/518 (5%)

Query: 18  VSSSAETRPNTHL--------LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK 69
           +S S  T P   L        L        F  L+      G   ++L  + +M   G  
Sbjct: 181 LSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLS 240

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PD V    L+    ++    +A  ++  +++ G  P    YN L+S F +   I+ A KV
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR-DNCKPTVITYTILIQATM 187
           ++ + + GF PD+ TYN++   LC  G ++ AF++ D++ R     P V+TY  L+ A  
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
               +  A++LL+EM                  +CK+G + +A   +  +   G  PDVI
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN L+      G   +   LM EM+ +GL+ +  T + ++ +LC+  + EDA ++L + 
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            ++G  PD  SY  +++AY K+   + A+   D MI    +P I  YNT++   C+    
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A++   +  + G  P+ ++YN +  A    GD   A    ++M+    +PD +T N+L
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++ LC  G +D+A+ L         +  VI+YN +I   CK   ++ ++     M  KG 
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           +P+  TY +++  +   G   EA  + + L     +S+
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 197/458 (43%), Gaps = 90/458 (19%)

Query: 49  RAGKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           +AGK DE+    + M   G   PDVV    L+   F+ R S+ A+R++E +   G +P +
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N ++   CK  ++E A   L+++   G +PDV+TYN +I + C  G +  AF + D+
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 167 L---------------LRDNCK--------------------PTVITYTILIQATMLEGQ 191
           +               L + CK                    P  ++Y  ++ A   E  
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            + A++L D+M                 G+C+   + +A   +     +G  PD  +YN+
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++      G  E   +   +M+    +P+VVT + L++ LC  GK + A+ +  +  EKG
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D  +Y+ LI + CK G +D A+ F D M   G  PD   YN +L+A  + G +++A 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 355 EIFEKLSDVG-------CP------------------PNVSS-----------YNTMFSA 378
            +  KL+D G       CP                  P   S           Y    + 
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           L + G    A  ++ EM+ KG+  D  TY +L+  L +
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 152/303 (50%), Gaps = 5/303 (1%)

Query: 213 AFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKW--EEGEKLMTEMISRGLEPNVVTYSI 269
           A Q + SL  R G +P + + N +L  L        +    +   +I   L PN  T+++
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+ + C  G   DA+  L   +  GL+PDA +Y+ L++A+C+ G L  A   L  M  DG
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P    YNT+++AF + G   QA ++ E ++  G  P++ +YN +   L  +G    A 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 390 GMISEMLSKGIE-PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
            +  EM   G   PD +TYN+L+    +     +A+ LL +M     +PT++++NI++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            CK  ++ E++  L  + E+G  P+  TY  LI+     G  A+A  L + +V    +  
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG-KGLKM 452

Query: 509 DTF 511
           DTF
Sbjct: 453 DTF 455



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 19/227 (8%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           ET +  +I    + G  + +  F   MV N  KPDVV C  L+       K +KA+++ E
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE 618

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +EK  + DV  YN LI   CK   ++ A    D +  +G  PD  TYN+++ +L   G
Sbjct: 619 SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678

Query: 156 MIESAFKVFDQLLRDN----------CKPT------VITYTILIQATMLEGQTDKAMKLL 199
             E A  +  +L               KP+      V  +    +A   E   D A++  
Sbjct: 679 RSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETY 738

Query: 200 DEM--GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
            E   G+C  G + +A   +  +  +G   D  +Y  L+  L+   K
Sbjct: 739 MERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785


>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
 gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 218/452 (48%), Gaps = 52/452 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++   R  + D+++  +  MV +G  PD +                             
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTI----------------------------- 175

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 YN +I   CK   I  A  +L+ +   G  PDV+TYN +I  +   G  E A +
Sbjct: 176 -----TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            +   L++ C P +ITYT+L++       + +A+++L++M +                  
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV------------------ 272

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC PD+++YN L+      G  EE   ++  ++S GLE N VTY+ L+ SLC     ++
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             ++L    +    P   +Y+ LI+  CK   L  AI+F   M+   CLPDIV YNT+L 
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A  K G  D A+E+   L +  CPP + +YN++   L   G   +AL +  +ML  GI P
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+IT  SLI   CR  +V+EA  +L +  +        +Y ++I G CK + I  +IEV+
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             M   GCKP+ET Y  +++G+   G  +EA+
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 190/379 (50%), Gaps = 21/379 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D  T N ++ +LCS G +  A K+ + + R N  P   + + L++      Q DKAM +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 200 DEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
             M M                 CKKG +  A   +  +   G  PDVI+YN ++R + + 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G  E+  +   + +  G  P ++TY++L+  +CR   +  A++VL     +G  PD  +Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L++  C+ G L+     + +++S G   + V YNT+L + C +   D+  EI   +  
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P V +YN + + L  +    RA+    +ML +   PD +TYN+++  + ++GMVD+
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +++T   P +I+YN +I G  K   + +++E+   M + G  P++ T   LI 
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI- 461

Query: 483 GIGYGGWRAEAMELANALV 501
              YG  RA  +E A  ++
Sbjct: 462 ---YGFCRANLVEEAGQVL 477



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 165/333 (49%), Gaps = 18/333 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+  F  G  ++++ F +  + NGC P ++  T L++   +   S +A+ V+E + 
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN+L++  C+   +E    V+  + S G   + VTYN ++ SLCS    +
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD 331

Query: 159 SAFKVFDQLLRDNCKPTVITYTILI----QATMLEGQTDKAMKLLDEM------------ 202
              ++ + + + +  PTVITY ILI    +A +L    D   ++L++             
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             M K+GMV  A + +  L++  C P +I+YN ++  L   G  ++  +L  +M+  G+ 
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T   LI   CR    E+A  VL+    +G      +Y  +I   CK   +++AIE 
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           ++ M++ GC PD   Y  I+    + G   +A+
Sbjct: 512 VEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 146/321 (45%), Gaps = 35/321 (10%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           QF  S +    + D  + N +L  L + GK  +  KL+  M      P+  + S L+  L
Sbjct: 90  QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            R  + + A+ +LR     G  PD  +Y+ +I   CK G +  A+  L+ M   G  PD+
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV 209

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           + YNT++      GNA+QA+  ++     GCPP + +Y  +   +       RA+ ++ +
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD------------------------- 429
           M  +G  PD +TYNSL++  CR G ++E   ++                           
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329

Query: 430 ----------MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
                     M  T + PTVI+YNI+I G CK R ++ +I+    M E+ C P+  TY  
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389

Query: 480 LIEGIGYGGWRAEAMELANAL 500
           ++  +   G   +A+EL   L
Sbjct: 390 VLGAMSKEGMVDDAIELLGLL 410


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 230/462 (49%), Gaps = 17/462 (3%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  LI+     G  +++      M  +G  P       +IK    ++    AV + +
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +   G PD F YN LI   C+  +I  A  + +++   G  P +VTY+ ++   C  G 
Sbjct: 377 EMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++ A K++ ++      P V+TYT L++  + +   DKA  LL EM              
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C  G V +  + ++  E+ G  P  ++YN ++   +  G       +  +M ++G
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+VTY+  I   C+    + A+ +L   + KGL PD  +Y+ LI  +C++G +  A+
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + L  M+ DG LP+I  YN+ +  +      ++AL  +EK+   G   + ++Y T+    
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGF 676

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+   AL + SEM++KG  PD IT+ +L   LCR+G +D+A  LL +M     RP V
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           + YN++I G+ +  ++ E+  +   M E+   P++TTY +L+
Sbjct: 737 LMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 221/480 (46%), Gaps = 55/480 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +++  F+ G +D+++   + M A+  +PD  +C+  I    + R +N+A+ V+  ++
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P  F +N+++    K  ++E A  + D L + G    VV    ++   C +  + 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++ LRD   PT +TYT+LI+                  G  ++GM  +A++  R
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIR------------------GCTEEGMPEKAYELCR 341

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G  P    +NM+++ LLN   W++   L  EM   G+ P+  TY+ILI  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV--- 335
           K  +A+++     E G+ P   +Y  L+  YC +G +D A++    M   G  P++V   
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 336 --------------------------------NYNTILAAFCKNGNADQALEIFEKLSDV 363
                                            YNT++   C  G   +  E+ ++    
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P   +YN++ +    +G    A  +  +M +KGI P+ +TY S I   C+    D A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +L D+     RP + +YN +I GFC+   ++ +++VL  M + G  PN + Y   I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 183/404 (45%), Gaps = 53/404 (13%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL---------------------LRD 170
           +R +G   D   +++++ +    GM + A ++FD++                     LRD
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 171 NCK--------------PTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
             +              P   T+  ++   +  G+ ++A+ + DE+              
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G C +  V +A          G  P  ++Y +L+R     G  E+  +L  +M   G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L P+   ++++I  L  D   +DAV + +   + G+ PDA++Y+ LI   C+  ++  A+
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL 406

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M   G  P IV Y+++L  +C NG  D+A++++ ++   G  PNV +Y T+    
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            +     +A  +++EM   G+  ++ TYN+LI+ LC  G V E   +L   E+  F PT 
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++YN II GF K   +  +  V   M  KG  PN  TY   I+G
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 143/335 (42%), Gaps = 71/335 (21%)

Query: 219 SLESRGCQPDVIS-----------------------------------YNMLLRTLLNMG 243
           S+E+RG  PD  S                                   +++++R     G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
            +++  +L  EM +  +EP+    S+ I+SLC+      A+ VLR  ++ G  P  ++++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 304 PLISAYCKDGRLDLAIEFLDYMIS-----------------------------------D 328
            ++    K GR++ A+   D +++                                   D
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G +P  V Y  ++    + G  ++A E+  ++ D G  P+ + +N +   L +      A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + +  EM   GI PD  TYN LI  LC+   + EA+ L   M  T  +P +++Y+ ++L 
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +C    ++E++++   M  KG  PN  TY  L++G
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 99/204 (48%)

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+TPDA S   L++   +      A+  L  M   G   D   ++ ++ A  K G  D 
Sbjct: 136 RGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDD 195

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ +F+++      P+    +   ++L    D  RAL ++ +M   G  P + T+NS++ 
Sbjct: 196 AVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVD 255

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            L + G ++EA+ +  ++ +T  + +V+    ++ G+C  R + +++++       G  P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
            + TY +LI G    G   +A EL
Sbjct: 316 TDVTYTVLIRGCTEEGMPEKAYEL 339



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 111/230 (48%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M +RG+ P+  + + L++   R     DA+ +L   + KG   DA+ +D ++ A  K+G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D A+   D M +    PD    +  +A+ CK  +A++AL +  K+ D G  P   ++N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L   G    AL +  E+L+ G +   +   +L+   C    V +A+ +  +     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             PT ++Y ++I G  +     ++ E+   M + G  P+   + ++I+G+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 1/118 (0%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            D+    +  LI    + G    +L     MVA G  PD +  T L     +    + A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           ++++ + +    P+V  YN LI+G+ +  +++ A ++ D +  R   PD  TY+I++G
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%)

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  S   + +    S     AL +++EM  KG   D   ++ ++    ++GM D+A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V L  +M ++   P     ++ I   CK R  N ++ VL  M + G  P + T+  +++ 
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 484 IGYGGWRAEAMELANALVS 502
           +  GG   EA+ + + L++
Sbjct: 257 LVKGGRMEEALHIKDELLA 275


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 217/429 (50%), Gaps = 19/429 (4%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
           + M+ +G +P ++    LI    ++ K  +A  ++  + +Y   PDVF Y +LI G C+ 
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
             ++LA  V DR+   G  P+ VTY+ +I  LC+ G ++ A  + ++++    +PTV TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           T+ I A                  +C      +A + V  ++ RGC+P+V +Y  L+  L
Sbjct: 307 TLPITA------------------LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
             +GK E    L  +M+  GL PN VTY+ LI+ LC  G+   A+ +    +  G   + 
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I   C  G ++ A+   + M+  G LP +V YNT++  +   GN + A  + + 
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + + GC P+  +YN + S     G    A     EM+  G+ P+ ++Y +LI    +DG 
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD A+ LL  ME     P V SYN +I G  K  R +E+ ++   M E+G  PN  TY  
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 480 LIEGIGYGG 488
           LI+G+   G
Sbjct: 589 LIDGLCRNG 597



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 226/463 (48%), Gaps = 18/463 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    R    D +    + MV  GC P+ V  + LI     E + ++A+ ++E ++
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EP V+ Y   I+  C     E A +++ R++ RG  P+V TY  +I  L   G +E
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  ++ ++L++   P  +TY  LI    + G+   A+K+   M                
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C  G + +A      +   G  P V++YN L+   L  G      +L+  M   G E
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY+ L+S   + GK E A    +   E GL P+  SY  LI  + KDG++D+A+  
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M   GC P++ +YN ++    K     +A +I +K+ + G  PNV +Y T+   L  
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    A  +  +M  +   P+  TY+SLI  LC++G  DEA  LL +ME     P  ++
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 655

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  +I GF    RI+ +  +L  M + GCKPN  TY +L++G+
Sbjct: 656 FTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 53/431 (12%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +++ N L+    K   +E A  +  ++ + G  P ++T+N +I  L  +G +  A  +  
Sbjct: 163 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 222

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           Q+ + +  P V TYT LI                  +G C+   +  AF     +   GC
Sbjct: 223 QIFQYDLSPDVFTYTSLI------------------LGHCRNRNLDLAFGVFDRMVKEGC 264

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------------ 261
            P+ ++Y+ L+  L N G+ +E   ++ EMI +G+E                        
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324

Query: 262 -----------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                      PNV TY+ LIS L R GK E A+ +     ++GL P+  +Y+ LI+  C
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A++   +M   G L +   YN I+   C  G+ ++A+ +FEK+  +G  P V 
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YNT+ +   + G+   A  ++  M   G EPDE TYN L+S   + G ++ A     +M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P  +SY  +I G  K  +++ ++ +L  M E GC PN  +Y  +I G+      
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 491 AEAMELANALV 501
           +EA ++ + +V
Sbjct: 565 SEAEKICDKMV 575



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 150/288 (52%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +   G    + S N LL  L      E    L  +M++ G++P+++T++ LI+ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK  +A  +L    +  L+PD ++Y  LI  +C++  LDLA    D M+ +GC P+ V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++   C  G  D+AL++ E++ + G  P V +Y    +AL +   +  A+ +++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G  P+  TY +LIS L R G ++ A+GL   M      P  ++YN +I   C   R 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++++   M   G   N  TY  +I+G+  GG   +AM L   ++ M
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)

Query: 269 ILISSLCR-DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           IL+   CR + +     D L      G     YS + L+    K   ++ A      M++
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P ++ +NT++    K G   +A  I  ++      P+V +Y ++      + +   
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A G+   M+ +G +P+ +TY++LI+ LC +G VDEA+ +L +M      PTV +Y + I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             C      E+IE++A M ++GC+PN  TY  LI G+   G    A+ L + ++
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 96/197 (48%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  +++   P  +    +I A   +  +    +FL+ +   G    + + NT+L    K 
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 176

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              + A  +++++ + G  P++ ++NT+ + L   G    A  ++S++    + PD  TY
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTY 236

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SLI   CR+  +D A G+   M      P  ++Y+ +I G C   R++E++++L  M E
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296

Query: 468 KGCKPNETTYVLLIEGI 484
           KG +P   TY L I  +
Sbjct: 297 KGIEPTVYTYTLPITAL 313


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 234/472 (49%), Gaps = 19/472 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + GK D +L+F+  M   G K  V   + LI    +  K   A  +  E++   
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y +LISG+CK  ++  A ++   +  +G SP+  T+  +I  LC    +  A 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+F +++  N  P  +TY +LI+    EG T +A +LLDEM                 G+
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A +F+  L+    + + + ++ LL      G+ ++      EM+ RG+  ++
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V YS+LI  + R       +D+L+   ++GL PD   Y  +I A  K G L +A    D 
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S+GCLP++V Y  ++   CK G  D+A  +  ++      PN ++Y      L S G+
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A+  + ++L +G   + +TYN LI   C+ G + EA  +LV+M  +   P  ISY+ 
Sbjct: 756 IEKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           II  +C+   + E+I++  +M  +G  P+   Y  LI G    G   +A EL
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 866



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 245/546 (44%), Gaps = 88/546 (16%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F+     +  M+  G  P     + L+    ++     A  ++  ++K+G  P +F YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI+  CK  +++ A  + + +  +G  P+ VTY+I+I S C RG ++ A     ++   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             K TV  Y+ LI      G+   A  L DEM                 G CK+G +  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           F+    +  +G  P+  ++  L+  L +  +  E  KL  EM+   + PN VTY++LI  
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA------------------------- 308
            C++G T  A ++L    EKGL PD Y+Y PLIS                          
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 309 ----------YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
                     YCK+GRLD A++    M+  G   D+V Y+ ++    +  +    +++ +
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ D G  P+   Y TM  A   +G+   A G+   M+S+G  P+ +TY +LI+ LC+ G
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719

Query: 419 MVDEAVGLLVDMESTR----------------------------------FRPTVISYNI 444
           ++D+A  L  +M ++                                   F    ++YNI
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI 779

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I GFCK  RI E+ EVL  M + G  P+  +Y  +I      G   EA++L  ++++  
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN-R 838

Query: 505 AISRDT 510
            ++ DT
Sbjct: 839 GVNPDT 844



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 219/448 (48%), Gaps = 19/448 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  +F  +L+  + +V++G +PDV + T +++   + +   +A  V+  +E  G +  V 
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  I G CK  ++  A ++ + L  +G   DV TY  ++  LC     E+  ++ +++
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +     P+    + L+                   G+ KKG +G AF  V  ++  G  P
Sbjct: 312 IEFGFVPSEAAVSNLVD------------------GLRKKGNIGSAFDLVNKVKKFGVAP 353

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +  YN L+ ++   GK +E E L   M  +GL PN VTYSILI S C+ GK + A+  L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E G+    Y Y  LIS +CK G+L  A    D MI++G  P++V Y ++++ +CK 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A  ++ +++  G  PN  ++  + S L  +     A  +  EM+   + P+E+TY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI   C++G    A  LL +M      P   +Y  +I G C T R++E+ E +  +  
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +  K NE  +  L+ G    G   +A++
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALD 621



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 222/461 (48%), Gaps = 18/461 (3%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK 118
           I  M ++GC   V      I+   + ++  +AV +  +L   G   DV  Y  L+ G CK
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             + E   ++++ +   GF P     + ++  L  +G I SAF + +++ +    P++  
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 179 YTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLE 221
           Y  LI +   +G+ D+A  L + MG                  CK+G +  A  F+  + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +  V  Y+ L+     +GK    + L  EMI+ GL+PNVV Y+ LIS  C++G+  
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  +      KG++P+ Y++  LIS  C   R+  A +    M+    +P+ V YN ++
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK GN  +A E+ +++ + G  P+  +Y  + S L S+G    A   ++++  +  +
Sbjct: 538 EGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK 597

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +E+ +++L+   C++G +D+A+    +M        ++ Y+++I G  + +     I++
Sbjct: 598 LNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDL 657

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           L  M ++G +P+   Y  +I+     G    A  L + +VS
Sbjct: 658 LKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 208/463 (44%), Gaps = 52/463 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + GK   +    + M+ANG KP+VV+ T LI  + +E + + A R+   + 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+ + + ALISG C AN++  ANK+   +      P+ VTYN++I   C  G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++ D+++     P   TY  LI      G+  +A + ++++                
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK+G +  A    R +  RG   D++ Y++L+  +L          L+ +M  +GL 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA--- 318
           P+ V Y+ +I +  + G  + A  +      +G  P+  +Y  LI+  CK G +D A   
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 319 ----------------IEFLDYMISDG---------------CLPDIVNYNTILAAFCKN 347
                             FLDY+ S+G                L + V YN ++  FCK 
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL 787

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A E+   + D G  P+  SY+T+       GD   A+ +   ML++G+ PD + Y
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 847

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           N LI   C  G + +A  L  DM     +P   +YN +I G C
Sbjct: 848 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 20/405 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
             ++ LI  + + N+ EL   V+ RL    G  P + T + ++  L        A  +FD
Sbjct: 146 LGFDLLIQTYVQ-NRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           +++    +P V  YT ++++                  +C+     +A + +  +ES GC
Sbjct: 205 EIVSSGLRPDVYVYTAVVRS------------------LCELKDFIRAREVIGRMESSGC 246

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
              V +YN+ +R L    +  E  ++   +  +GL  +V TY  L+  LC+  + E   +
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           ++    E G  P   +   L+    K G +  A + ++ +   G  P +  YN ++ + C
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K+G  D+A  +F  +   G  PN  +Y+ +  +    G    AL  + +M   GI+    
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+SLIS  C+ G +  A  L  +M +   +P V+ Y  +I G+CK   ++ +  +   M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
             KG  PN  T+  LI G+ +    AEA +L   +V  + I  + 
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 233/462 (50%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+     PDVV  + +I    + +  +KA+ V+  + 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++RS G  PDVVTYN ++  LC  G   
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   +P + TY  L+Q    +G   +   LLD M              VR
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM--------------VR 364

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  PD   +N+L+       K +E   + ++M   GL PNVVTY  +I  LC+ G
Sbjct: 365 N----GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +DA+       ++GLTP+   Y  LI + C   + D A E +  M+  G   + + +N
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  PNV +Y+T+      +G    A  ++S M S 
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  CR   +D+A+ L  +M S+   P +I+YNII+ G   TRR   +
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+   + + G +   +TY +++ G+       EA+ +   L
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 242/479 (50%), Gaps = 28/479 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + ++V  G + + +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 99  RAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI--VLRRMTELSCMP 156

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           DVF+   L+ G C  N+ + A ++L  +   R  G +PDVV+Y  +I      G  + A+
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM-----------------G 203
             + ++L     P V+TY+ +I A + +GQ  DKAM++L  M                 G
Sbjct: 217 STYHEMLDRRISPDVVTYSSII-AALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C      +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGLEP+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY  L+      G   +   +L      G+ PD + ++ LI AY K  ++D A+    
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G  P++V Y  ++   CK+G+ D A+  FE++ D G  PN+  Y ++  +L    
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A  +I EML +GI  + I +NS+I   C++G V E+  L   M     +P VI+Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +I G+C   +++E+ ++L++MF  G KP+  TY  LI G        +A+ L   +VS
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 16/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C+A +++L    L  +  +GF  + +T+  ++  LC+      A   
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++   +C P V + TIL++    E ++ +A++LL  M   + G              
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG-------------- 190

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  PDV+SY  ++      G  ++      EM+ R + P+VVTYS +I++LC+    + 
Sbjct: 191 -GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL    + G+ P+  +Y+ ++  YC   +   AI FL  M SDG  PD+V YN+++ 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG + +A +IF+ ++  G  P++++Y T+     + G  +    ++  M+  GI P
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N LI    +   VDEA+ +   M      P V++Y  +I   CK+  +++++   
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G  PN   Y  LI  +
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSL 451



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 201/423 (47%), Gaps = 19/423 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +SM   G +PD+     L++ +  +    +   +++++ + G  PD  
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  + K  +++ A  V  ++R  G +P+VVTY  +IG LC  G ++ A   F+Q+
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           + +   P +I YT LI +  +  + DKA +L+ EM                    RG   
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM------------------LDRGICL 474

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + I +N ++ +    G+  E EKL   M+  G++PNV+TYS LI   C  GK ++A  +L
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            +    G+ PD  +Y+ LI+ YC+  R+D A+     M+S G  P+I+ YN IL      
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                A E++  ++  G    +S+YN +   L  +     AL M   +    ++ +  T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I  L + G  DEA  L V   S    P   +Y ++         + E  ++  +M +
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714

Query: 468 KGC 470
            GC
Sbjct: 715 NGC 717



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 14/284 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P V +Y +L+      G+ + G   +  ++ +G     +T++ L+  LC D +T DA+D 
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E    PD +S   L+   C + R   A+E L  M  D   G  PD+V+Y T++ 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            F K G++D+A   + ++ D    P+V +Y+++ +AL       +A+ +++ M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TYNS++   C      EA+G L  M S    P V++YN ++   CK  R  E+ ++ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            +M ++G +P+  TY  L++G    G          ALV MHA+
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKG----------ALVEMHAL 358



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 64/445 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C N +S E  ++  S   R     L  D+    +  L++     G   E    ++ MV N
Sbjct: 312 CKNGRSTEARKIFDSMTKRG----LEPDI--ATYCTLLQGYATKGALVEMHALLDLMVRN 365

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  PD  +   LI  + ++ K ++A+ V   + ++G  P+V  Y A+I   CK+  ++ A
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLC----------------SRGM------------- 156
               +++   G +P+++ Y  +I SLC                 RG+             
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 157 -------IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
                  IES  K+FD ++R   KP VITY+ LI    L G+ D+A KLL  M       
Sbjct: 486 HCKEGRVIESE-KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G C+   +  A    + + S G  P++I+YN++L+ L +  +    ++L 
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             +   G +  + TY+I++  LC++  T++A+ + +      L  +  +++ +I A  K 
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR D A +      S+G +P+   Y  +       G  ++  ++F  + D GC  +    
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGML 724

Query: 373 NTMFSALWSSGDKIRA---LGMISE 394
           N +   L   G+  RA   L MI E
Sbjct: 725 NFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 41/296 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP  ++Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDG---------------------------------- 329
            LI   C+ GRLDL    L  ++  G                                  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 330 --CLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
             C+PD+ +   +L   C    + +ALE+   ++D    G  P+V SY T+ +  +  GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML + I PD +TY+S+I+ LC+   +D+A+ +L  M      P  ++YN 
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+ G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +++
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 53/288 (18%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G+  ES    + MV  G KP+V+  + LI  +    K ++A +++  + 
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI---------- 148
             G +PD   YN LI+G+C+ ++++ A  +   + S G SP+++TYNI++          
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 149 -------------------------GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
                                      LC   + + A ++F  L   + +    T+ I+I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 184 QATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-----QFVRSLESRGCQ 226
            A +  G+ D+A  L                 +  + ++GQ       Q   S+E  GC 
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCT 718

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            D    N ++R LL  G+       ++ +  +       T S+ I  L
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 232/488 (47%), Gaps = 55/488 (11%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PD V  T L+K  + E     AV++  E+ EK    D   Y  LI+G CKA +  LA
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            K+ ++++      DV TY ++I SLC  GM   A  +F +++     P V+ Y+ L+  
Sbjct: 132 IKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 186 TMLEGQTDKAMKLLDEM------------------------------------------- 202
               G+  +A++   EM                                           
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G VG+A Q +  +  +G +PD+++YN L+  L  +G+ E+  KL  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            +  RG++ NV +Y+ILI+  C+D K ++A  +    + KGL P   +Y+ LI A C+ G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R+  A +    M + G    +  Y  +L   CKNG+ ++A+++F+ +      PN+  ++
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   +  +G    A     E+   G+EPD I YN LI+ LC  GM+ EAV LL  ME  
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET-TYVLLIEGIGYGGWRAE 492
              P  I++N+II    K   I+E+I++L  M  +   P+E  T +LL        W A 
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAA 550

Query: 493 AMELANAL 500
            + L NAL
Sbjct: 551 LVSLPNAL 558



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 212/416 (50%), Gaps = 18/416 (4%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L++  EPD      L+ G    N I  A ++ D +  +G   D  TY I+I  LC     
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A K+ ++ ++ NCK  V TY ++I +   +G T +A+ +  EM               
Sbjct: 129 GLAIKLHEK-MKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C+ G + +A +F + +E RG   DV +YN L+  L   G W+E    +  M+ RG 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+  T++ILI  LC++GK  +A  +L     KG  PD  +Y+ L++  C  G+L+ A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + +   G   ++ +YN ++  +CK+   D+A  +FE++   G  P+  +YNT+  AL 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            SG    A  +  EM + G      TY  L+  LC++G ++EA+ L   ++ T  +P + 
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++I++ G C+  ++ E+ +    + + G +P+   Y +LI G+   G  +EA++L
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 160/312 (51%), Gaps = 18/312 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    RAG + E  +F+  MV  G  PD    T LI    +E K  +A +++E++ 
Sbjct: 219 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH 278

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EPD+  YN L++G C   Q+E A K+ + L  RG   +V +YNI+I   C    I+
Sbjct: 279 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++F+++     KP+ +TY  LI A    G+   A KL  EM                
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 398

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G + +A    +S++    +P++  +++LL  +   GK EE  K   E+   GLE
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ + Y+ILI+ LC  G   +AV +L   +EKG  PD+ +++ +I    K+  +  AI+ 
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 322 LDYMISDGCLPD 333
           L+ M +    PD
Sbjct: 519 LEEMRNRNFSPD 530



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 159/343 (46%), Gaps = 41/343 (11%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RG +PD ++   L++ +       +  +L  EM  +GL  +  TY ILI+ LC+  KT  
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+  L    +     D ++Y  +I + CKDG    A++    MI  G LPD+V Y++++ 
Sbjct: 131 AIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG------------------- 383
             C+ G   +ALE F+++   G   +V +YN++   L  +G                   
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 384 ---------DKIRALGMISE-------MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
                    D +   G + E       M  KG EPD +TYN+L++ LC  G +++A  L 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             +     +  V SYNI+I G+CK ++I+E+  +   M  KG KP+  TY  LI  +   
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 488 GWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHL 530
           G    A +L    V M    +  F +L+    LLD   +  HL
Sbjct: 370 GRVRTAQKL---FVEMQTCGQ--FLKLSTYCVLLDGLCKNGHL 407



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 124/246 (50%), Gaps = 1/246 (0%)

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           + RG EP+ VT + L+  +  +    DAV +     EKGL  DA +Y  LI+  CK  + 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
            LAI+  + M  + C  D+  Y  I+ + CK+G   +AL++F ++   G  P+V  Y+++
Sbjct: 129 GLAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              L   G    AL    EM  +GI  D  TYNSLI  L R G+  E    L  M    F
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P   ++ I+I G CK  ++ E+ ++L  M  KG +P+  TY  L+ G+   G   +A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 496 LANALV 501
           L  +L 
Sbjct: 308 LFESLA 313



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 9/140 (6%)

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L +G EPD +T  +L+  +  +  + +AV L  +M          +Y I+I G CK R+ 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--------MHAIS 507
             +I++   M +  CK +  TY ++I+ +   G   EA+++ + ++         +++  
Sbjct: 129 GLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 508 RDTFKRLNRTFPLLDVYKEI 527
            D   R  R    L+ +KE+
Sbjct: 188 MDGLCRFGRLKEALEFFKEM 207


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 207/399 (51%), Gaps = 20/399 (5%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K VR +E+L +   P+   YN +I+GFC   +++ A +V+  +R RG  +PD  TY  
Sbjct: 129 TGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYAT 188

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G +E A KVFD++L +    P+ + Y  LI                   G C
Sbjct: 189 LISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIG------------------GYC 230

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G +  A Q+   +  RG    V +YN+L+  L    +  +   ++ EM   G  P+V 
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A++V     +KG+   A +Y  LI  + + G++       +  
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVA 350

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ + C  G+ ++A EI  ++     PP+  +YNT+       G  
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL 410

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD ++YN+LIS     G + +A+ +  +M    F PT+++YN +
Sbjct: 411 DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G CK R+ +++  ++  M  KG  P+++TY+ LIEG+
Sbjct: 471 IQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 24/361 (6%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T+NIM+  LC+ G    A     +LLR   +P  +TY  +I                   
Sbjct: 118 TFNIMLRHLCATGKPVRAL----ELLRQMPRPNAVTYNTVIA------------------ 155

Query: 203 GMCKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-L 260
           G C +G V  A + +R +  RG   PD  +Y  L+     +G+ E+  K+  EM+++G +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ V Y+ LI   C  GK + A+       ++G+     +Y+ L+ A   D R   A  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+ M  +G  PD+  YN ++  +CK GN  +ALE+FE++S  G      +Y ++     
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G       + +  + KGI PD + YN+LI+  C  G ++ A  ++ +ME  R  P  +
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDM 395

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN ++ GFC   R++E+  ++  M ++G +P+  +Y  LI G    G   +A+ + + +
Sbjct: 396 TYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455

Query: 501 V 501
           +
Sbjct: 456 M 456



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 19/292 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK D +L + E MV  G    V     L+   F + +++ A  V+E ++K G  PDVF Y
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+CK    + A +V + +  +G     VTY  +I     +G ++   ++F+  ++
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              +P V+ Y  LI +                   C  G + +A++ +  +E +   PD 
Sbjct: 353 KGIRPDVVMYNALINSH------------------CTGGDMERAYEIMAEMEKKRIPPDD 394

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+R    +G+ +E   L+ EM  RG++P++V+Y+ LIS     G  +DA+ V   
Sbjct: 395 MTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDE 454

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
             +KG  P   +Y+ LI   CK  + D A   +  M++ G  PD   Y +++
Sbjct: 455 MMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 1/164 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G+  E+       V  G +PDVVM   LI          +A  +M  +E
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K    PD   YN L+ GFC   +++ A  ++D +  RG  PD+V+YN +I     +G I+
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIK 446

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            A +V D+++     PT++TY  LIQ      Q D A  L+ EM
Sbjct: 447 DALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEM 490


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 235/458 (51%), Gaps = 17/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    +G  +++      M  NG  P V     L++ + +     +A ++ +     G
Sbjct: 406 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 465

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             ++F YN ++S  CK  +++ A  +LD + ++G  P+VV+YN MI   C +G ++ A  
Sbjct: 466 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 525

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           VF  +L  + KP V+TY+ILI     +G ++KA+ L D+M                 G+C
Sbjct: 526 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 585

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A   +++    G  P  ++YN ++   +  G  +    +  EM   G+ PNVV
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI+  C+  + + A+      +EKGL  D  +Y  LI  +CK   ++ A +    +
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  P+ + YN++++ F    N + AL  ++K+ +   P ++ +Y T+   L   G  
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  +  EMLSKGI PD IT++ L++ LC  G ++ A  +L +M+     P+V+ YN +
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I G+ +   + E+  +   M ++G  P++ TY +LI G
Sbjct: 826 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 227/478 (47%), Gaps = 31/478 (6%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV----VMCTKLIKK-FFQE 85
             F++    F  L+    RA + + ++    +M+     P V    ++ T L+++    E
Sbjct: 184 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGE 243

Query: 86  RKS--NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            +   NK V    +   YG  D F  + ++    K  ++E A +     + RG   D   
Sbjct: 244 LRDLYNKMV----LRGIYG--DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 297

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM- 202
           Y+I+I ++C +       ++ +++      P+  T+T +I A + +G   +A++L +EM 
Sbjct: 298 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G C +G +  A      +   G  P+ ++Y++L+    N G  E
Sbjct: 358 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 417

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +  +L T+M   G+ P+V   + L+    +    E+A  +   A + G+  + ++Y+ ++
Sbjct: 418 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMM 476

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           S  CK G++D A   LD M++ G +P++V+YN ++   C+ GN D A  +F  +      
Sbjct: 477 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 536

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV +Y+ +    +  GD  +AL +  +MLS  I P + T+N++I+ LC+ G + EA   
Sbjct: 537 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           L +     F P+ ++YN I+ GF K   I+ ++ V   M E G  PN  TY  LI G 
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGF 654



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 198/434 (45%), Gaps = 52/434 (11%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N  +SG    + +   + +++  +   F  D   +N ++ +      IE+A   F+ ++ 
Sbjct: 159 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMIC 218

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            +  P V    IL+ A                  + ++ M+G+       +  RG   D 
Sbjct: 219 QDVIPWVPYMNILLTA------------------LVRRNMIGELRDLYNKMVLRGIYGDH 260

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            + ++++R  L  G+ EE E+   E   RG++ +   YSI+I ++C+   +   +++L  
Sbjct: 261 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 320

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            KE+G  P   ++  +I A    G +  A+   + MI+ G   ++V   +++  +C  GN
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP------- 402
            D AL +F K+++ G  PN  +Y+ +     +SG+  +A  + ++M   GI P       
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440

Query: 403 ------------------DE---------ITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                             DE          TYN ++S LC+ G +DEA  LL +M +   
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V+SYN +ILG C+   ++ +  V + M  +  KPN  TY +LI+G    G   +A++
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 496 LANALVSMHAISRD 509
           L + ++S++    D
Sbjct: 561 LFDQMLSLNIAPTD 574


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 221/450 (49%), Gaps = 24/450 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            Q +K +    R G+  + L  ++ M   GC PD V  T L+K    E+++ +A+ ++ +
Sbjct: 129 NQLLKGLCHGKRVGEAMDVL--LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHM 186

Query: 98  L-EKYGE---PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + + +G    P+V +Y+ +I+GF    Q++    +   +  RG  PDVVTY  +I  LC 
Sbjct: 187 MADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCK 246

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
             + + A  VF Q++ +  KP   TY  LI   +  G+  + +++L+EM           
Sbjct: 247 AQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM----------- 295

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   +RG +PD  +Y  LL  L   G+  E       MI +G++P V TY ILI  
Sbjct: 296 -------SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHG 348

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
               G   +    L    E GL+PD + ++   SAY K G +D A++  + M   G  P+
Sbjct: 349 YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +VNY  ++ A CK G  D A   F ++ + G  PN+  +N++   L +     RA  ++ 
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVY 468

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EML +GI P+ + +N+LI  LC  G V E   L+  ME    RP   SY  +I G+C T 
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG 528

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           R +E+ +V   M   G  P E TY  L+ G
Sbjct: 529 RTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 230/495 (46%), Gaps = 53/495 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   F  G+ D+       M+  G  PDVV  T +I    + +  ++A  V + +   G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+ + YN LI G+    + +   ++L+ + +RG  PD  TY  ++  LC  G    A 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 162 KVFDQLLRDNCKPTVITYTILIQA---------------TMLE----------------- 189
             FD ++R   KP V TY ILI                  M+E                 
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 190 ---GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G  DKAM + ++M                  +CK G V  A      + + G  P++
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + +N L+  L  + KWE  E+L+ EM+ +G+ PN V ++ LI +LC  G+  +   ++  
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +  G+ PDA+SY PLIS YC  GR D A +  D M+S G  P  V YNT+L  +C    
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A  +F ++   G  P V +YNT+   L+ +     A  +   M++ G + D  TYN 
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +++ LC+   VDEA  +   + S   +  +I++ I+I    K  R  +++++ AA+   G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 470 CKPNETTYVLLIEGI 484
             PN  TY L+ E +
Sbjct: 685 LVPNVVTYRLVAENL 699



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 207/451 (45%), Gaps = 18/451 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+ +F +SM+  G KP V     LI  +  +   ++    ++++ + G  PD  
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N   S + K   I+ A  + +++R  G SP+VV Y  +I +LC  G ++ A   F+Q+
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P ++ +  L+       + ++A +L+ EM                  +C  G V
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +  + +  +E  G +PD  SY  L+      G+ +E EK+   M+S GL P  VTY+ L
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C   + +DA  + R    KG+TP   +Y+ ++    +  R   A E    MI+ G 
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN IL   CK+   D+A ++F+ L   G   N+ ++  M  AL   G K  A+ 
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ P+ +TY  +   L  +G ++E   L   ME     P     N ++    
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               I+ +   L+ + E+      +T  LL+
Sbjct: 736 HRGDISRAGAYLSKLDERNFSVEASTTSLLM 766



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 185/396 (46%), Gaps = 18/396 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKYGEPDVF 107
           + G  D+++     M  +G  P+VV    LI    +  R  +  V+  +++ +   P++ 
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N+L+ G C  ++ E A +++  +  +G  P+ V +N +I +LC+ G +    ++ D +
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P   +YT LI    L G+TD+A K+ D M                 G C    +
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A+   R +  +G  P V++YN +L  L    ++ E ++L   MI+ G + ++ TY+I+
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 625

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+    ++A  + ++   KGL  +  ++  +I A  K GR + A++    + ++G 
Sbjct: 626 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 685

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P++V Y  +     + G+ ++   +F  +   G  PN    N +   L   GD  RA  
Sbjct: 686 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA 745

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            +S++  +    +  T + L+S    D     A  L
Sbjct: 746 YLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 26/318 (8%)

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG-----CQPDVISYNMLLRTLLNMGKWEE 247
           D A+KL DE+    +    +AF  + +  SR       +  V  +N ++R          
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRE--------- 81

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
                    S  + PN+ TYSILI   CR G  E          + G   D  + + L+ 
Sbjct: 82  --------CSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLK 133

Query: 308 AYCKDGRLDLAIE-FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-- 364
             C   R+  A++  L  M   GC+PD V+Y  +L   C    A++ALE+   ++D    
Sbjct: 134 GLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGR 193

Query: 365 -CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
            CPPNV SY+ + +  ++ G   +   +  EM+ +GI PD +TY ++I  LC+  + D A
Sbjct: 194 RCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRA 253

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+   M    F+P   +YN +I G+    +  E +++L  M  +G KP+  TY  L+  
Sbjct: 254 EGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNY 313

Query: 484 IGYGGWRAEAMELANALV 501
           +   G   EA    ++++
Sbjct: 314 LCKNGRCREARFFFDSMI 331



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 9/163 (5%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSAL----WSSGDKIRALGMISEML---SKGIEPD 403
           D AL++F++L     P +V ++N + +A+     SS  ++ A+   + M+   S  + P+
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASEL-AVSHFNRMVRECSDKVAPN 89

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV-L 462
             TY+ LI   CR G ++        +  T +R   I+ N ++ G C  +R+ E+++V L
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
             M E GC P+  +Y +L++G+       EA+EL + +   H 
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHG 192


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 235/493 (47%), Gaps = 51/493 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LIK   + G+  ++   ++ M   G  P V     +I  + +  +   A+ +  ++E
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PD + YN+LI G C   +++ A ++L+   +RGF+P V+T+  +I   C    I+
Sbjct: 347 QNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +V   ++  NCK  +  Y +LI   + + +  +A + L+EM                
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSII 465

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK GMVG A +  + +E  GC P+  +Y  L+  L+   K  +   L+T+M   G+ 
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P V+TY+ LI   C+  + ++A  +    ++ GLTPD  +Y+ L  A CK GR + A  F
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 322 L--------------------------------DYMISDGCLPDIVNYNTILAAFCKNGN 349
           L                                + M+++GC  D+  Y+ +L A CK   
Sbjct: 586 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++AL I ++++  G   N+ +Y  + S +   G    A  + +EM+S G +P   TY  
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
            IS  C+ G ++EA  L+ +ME     P V++YNI I G      I+ +   L  M +  
Sbjct: 706 FISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS 765

Query: 470 CKPNETTYVLLIE 482
           C+PN  TY LL++
Sbjct: 766 CEPNCWTYWLLLK 778



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 211/458 (46%), Gaps = 25/458 (5%)

Query: 52  KFDESLY---FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +FD + Y       +V  G  PD V    +I  + ++     A R   +L + G + D +
Sbjct: 156 RFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTY 215

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             NAL+ G+C+ + +  A  +L  +   G   +  +Y I+I  LC    +  A  +   +
Sbjct: 216 TCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMM 275

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + D C   + TYT+LI+    EG+   A  LLDEM                 G CK G +
Sbjct: 276 VHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRM 335

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A      +E  GC PD  +YN L+  L   GK +E E+L+   I+RG  P V+T++ L
Sbjct: 336 KDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNL 394

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C+  + +DA+ V           D  +Y  LI+   K  RL  A E L+ M ++G 
Sbjct: 395 INGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGL 454

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y +I+  +CK G    ALE+F+ +   GC PN  +Y ++   L       +A+ 
Sbjct: 455 APNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMA 514

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +I++M   GI P  ITY +LI   C+    D A  L   ME     P   +YN++    C
Sbjct: 515 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           K+ R  E+   L     KG    + TY  L++G    G
Sbjct: 575 KSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAG 609



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 226/499 (45%), Gaps = 37/499 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + G    +L   + M   GC P+      LI    Q++K +KA+ ++  ++
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P V  Y  LI G CK ++ + A ++ + +   G +PD   YN++  +LC  G  E
Sbjct: 521 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 580

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+     L+R     T +TYT L+      G TD A  L+++M                
Sbjct: 581 EAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  + +A   +  +   G + ++++Y +++  ++  GK +  + L  EMIS G +
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY++ ISS C+ G+ E+A  ++   +  G+TPD  +Y+  I+     G +D A   
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNG--NA--------------DQALEIFEKLSDVGC 365
           L  M+   C P+   Y  +L  F K    NA              +   ++ E++   G 
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P V +Y+++ +    +     A  ++  ML K I P+E  Y  LI C C   +  +AV 
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVS 877

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            + DM    F+P + SY+ +I+G C     + +  +   +       NE  + +L +G+ 
Sbjct: 878 FVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL 937

Query: 486 YGGWRAEAMELANALVSMH 504
             G      +L  A+ + H
Sbjct: 938 KAGHVDFCSQLLAAMDNRH 956



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 193/460 (41%), Gaps = 66/460 (14%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K  +++  I  M  +G  P V+  T LI+   ++ + + A R+ E++E+ G  PD  AYN
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 111 --------------------------------ALISGFCKANQIELANKVLDRLRSRGFS 138
                                           +L+ GF KA   + A  +++++ + G  
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            D+ TY++++ +LC +  +  A  + DQ+     K  ++ YTI+I   + EG+ D A  L
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            +EM                   CK G + +A   +  +E  G  PDV++YN+ +    +
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGH 747

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR----DGKTEDA------------VD 285
           MG  +     +  M+    EPN  TY +L+    +    +    D               
Sbjct: 748 MGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQ 807

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +L    + GL P   +Y  +I+ +CK  RL+ A   LD+M+     P+   Y  ++   C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCC 867

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
                 +A+     + + G  P + SY+ +   L   GD  RA  +  ++L      +E+
Sbjct: 868 DIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEV 927

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +  L   L + G VD    LL  M++   R    SY+++
Sbjct: 928 AWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 175/393 (44%), Gaps = 35/393 (8%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + +  +  L+    +AG  D +   IE MV  GCK D+   + L++   +++K N+A+ +
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +   G + ++ AY  +IS   K  + + A  + + + S G  P   TY + I S C 
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G IE A  +  ++ RD   P V+TY I I                   G    G + +A
Sbjct: 713 IGRIEEAEHLIGEMERDGVTPDVVTYNIFIN------------------GCGHMGYIDRA 754

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNM-----------GKWEEGE-----KLMTEMIS 257
           F  ++ +    C+P+  +Y +LL+  L M           G W   E     +L+  M+ 
Sbjct: 755 FSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMK 814

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            GL P VVTYS +I+  C+  + E+A  +L     K ++P+   Y  LI   C       
Sbjct: 815 HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGK 874

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+ F+  MI  G  P + +Y+ ++   C  G+ D+A  +F  L  +    N  ++  +  
Sbjct: 875 AVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILND 934

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            L  +G       +++ M ++    D  +Y+ L
Sbjct: 935 GLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 39/310 (12%)

Query: 210 VGQAFQFVRSLESRGCQPDVIS---YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           V +A   ++++   G +  V+S   YN+ LR+LL     E   KL + ++  GL P+ VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL---- 322
           Y+ +I + C+ G    A       +E G+  D Y+ + L+  YC+   L  A   L    
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241

Query: 323 -------DY------------------------MISDGCLPDIVNYNTILAAFCKNGNAD 351
                  +Y                        M+ DGC  ++  Y  ++   CK G   
Sbjct: 242 LMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIH 301

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  + +++   G  P+V +YN M      SG    ALG+ + M   G  PD+ TYNSLI
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC  G +DEA  LL    +  F PTVI++  +I G+CK  RI++++ V + M    CK
Sbjct: 362 YGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420

Query: 472 PNETTYVLLI 481
            +   Y +LI
Sbjct: 421 LDLQAYGVLI 430



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++ + SL R   TE    +     ++GL PD  +Y+ +I AYCK G L +A  +   + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G   D    N +L  +C+  +  +A  +   +  +GC  N  SY  +   L  +    
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL ++  M+  G   +  TY  LI  LC++G + +A GLL +M      P+V +YN +I
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK+ R+ +++ + A M + GC P++ TY  LI G+  GG   EA EL N  ++
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIA 381


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 217/429 (50%), Gaps = 19/429 (4%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
           + M+ +G +P ++    LI    ++ K  +A  ++  + +Y   PDVF Y +LI G C+ 
Sbjct: 229 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
             ++LA  V DR+   G  P+ VTY+ +I  LC+ G ++ A  + ++++    +PTV TY
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           T+ I A                  +C      +A + V  ++ RGC+P+V +Y  L+  L
Sbjct: 349 TLPITA------------------LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
             +GK E    L  +M+  GL PN VTY+ LI+ LC  G+   A+ +    +  G   + 
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I   C  G ++ A+   + M+  G LP +V YNT++  +   GN + A  + + 
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + + GC P+  +YN + S     G    A     EM+  G+ P+ ++Y +LI    +DG 
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD A+ LL  ME     P V SYN +I G  K  R +E+ ++   M E+G  PN  TY  
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630

Query: 480 LIEGIGYGG 488
           LI+G+   G
Sbjct: 631 LIDGLCRNG 639



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 228/463 (49%), Gaps = 18/463 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    R    D +    + MV  GC P+ V  + LI     E + ++A+ ++E ++
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EP V+ Y   I+  C     E A +++ R++ RG  P+V TY  +I  L   G +E
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  ++ ++L++   P  +TY  LI    + G+   A+K+   M                
Sbjct: 398 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 457

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C  G + +A      +   G  P V++YN L+   L  G      +L+  M   G E
Sbjct: 458 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY+ L+S   + GK E A    +   E GL P+  SY  LI  + KDG++D+A+  
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M   GC P++ +YN ++    K     +A +I +K+++ G  PNV +Y T+   L  
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    A  +  +M  +   P+  TY+SLI  LC++G  DEA  LL +ME     P  ++
Sbjct: 638 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 697

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  +I GF    RI+ +  +L  M + GCKPN  TY +L++G+
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 230/506 (45%), Gaps = 42/506 (8%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI      G+ DE+L  +E M+  G +P V   T  I          +A+ 
Sbjct: 307 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 366

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           ++  ++K G  P+V  Y ALISG  +  ++E+A  +  ++   G  P+ VTYN +I  LC
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G   +A K+F  +          TY  +I+   L G  +KAM L ++M          
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G   KG V  A + +  ++  GC+PD  +YN L+      GK E       EM
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  GL PN V+Y+ LI    +DGK + A+ +L   +E G  P+  SY+ +I+   K+ R 
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A +  D M   G LP+++ Y T++   C+NG    A +IF  +    C PN+ +Y+++
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              L   G    A  ++ EM  KG+ PDE+T+ SLI      G +D A  LL  M     
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726

Query: 436 RPTVISYNIIILGFCK----------------------TRRINESI--EVLAAMFEKGCK 471
           +P   +Y++++ G  K                       + +N  I   +LA M E GC+
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELA 497
           P   TY  L+ G+   G   EA +L 
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLV 812



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 214/449 (47%), Gaps = 46/449 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  + +L+    + GK + + ++ + MV  G  P+ V  T LI    ++ K + A+ ++E
Sbjct: 520 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE 579

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E+ G  P+V +YNA+I+G  K N+   A K+ D++  +G  P+V+TY  +I  LC  G
Sbjct: 580 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG 639

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             + AFK+F  + +  C P + TY+ LI     EG+ D+A  LL EM             
Sbjct: 640 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM------------- 686

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL- 274
                E +G  PD +++  L+   + +G+ +    L+  M+  G +PN  TYS+L+  L 
Sbjct: 687 -----ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQ 741

Query: 275 --C---------------------RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             C                     +D   E   ++L    E G  P   +Y  L+S  C+
Sbjct: 742 KECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCR 801

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            GR   A + +  M   G  PD   Y ++L A CKN   D AL+IF  +   G   ++S 
Sbjct: 802 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 861

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y  +  AL  +G    A  +   ML K    DEI +  L+  L ++G +D  + LL  ME
Sbjct: 862 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 921

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIE 460
           S  F P + +Y  +ILG  +  RI +SIE
Sbjct: 922 SKNFTPNIQTY--VILGR-ELSRIGKSIE 947



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 221/470 (47%), Gaps = 43/470 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + ++IK     G  ++++   E M+  G  P VV    LI  +  +   N A R++++++
Sbjct: 453 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G EPD + YN L+SGF K  ++E A+     +   G +P+ V+Y  +I      G ++
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD 572

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + +++    C P V +Y  +I     E +  +A K+ D+M                
Sbjct: 573 IALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA--------------- 617

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G  P+VI+Y  L+  L   G+ +   K+  +M  R   PN+ TYS LI  LC++G
Sbjct: 618 ---EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A  +L+  + KGL PD  ++  LI  +   GR+D A   L  M+  GC P+   Y+
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYS 734

Query: 339 TILAAF---C---------------------KNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            +L      C                     K+ N +    +  ++S++GC P + +Y+T
Sbjct: 735 VLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYST 794

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + S L   G    A  ++ +M  +G  PD   Y SL+   C++  VD A+ +   +E+  
Sbjct: 795 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 854

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           F+  +  Y  +I   CK  ++ E+  +   M EK    +E  + +L++G+
Sbjct: 855 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 198/430 (46%), Gaps = 53/430 (12%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +++ N L+    K   +E A  +  ++ + G  P ++T+N +I  L  +G +  A  +  
Sbjct: 205 LYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILS 264

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           Q+ + +  P V TYT LI                  +G C+   +  AF     +   GC
Sbjct: 265 QIFQYDLSPDVFTYTSLI------------------LGHCRNRNLDLAFGVFDRMVKEGC 306

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------------ 261
            P+ ++Y+ L+  L N G+ +E   ++ EMI +G+E                        
Sbjct: 307 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 366

Query: 262 -----------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                      PNV TY+ LIS L R GK E A+ +     ++GL P+  +Y+ LI+  C
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A++   +M   G L +   YN I+   C  G+ ++A+ +FEK+  +G  P V 
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YNT+ +   + G+   A  ++  M   G EPDE TYN L+S   + G ++ A     +M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P  +SY  +I G  K  +++ ++ +L  M E GC PN  +Y  +I G+      
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 491 AEAMELANAL 500
           +EA ++ + +
Sbjct: 607 SEAEKICDKM 616



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 150/288 (52%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  +   G    + S N LL  L      E    L  +M++ G++P+++T++ LI+ L 
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK  +A  +L    +  L+PD ++Y  LI  +C++  LDLA    D M+ +GC P+ V
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++   C  G  D+AL++ E++ + G  P V +Y    +AL +   +  A+ +++ M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G  P+  TY +LIS L R G ++ A+GL   M      P  ++YN +I   C   R 
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++++   M   G   N  TY  +I+G+  GG   +AM L   ++ M
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 479



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 1/234 (0%)

Query: 269 ILISSLCR-DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           IL+   CR + +     D L      G     YS + L+    K   ++ A      M++
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P ++ +NT++    K G   +A  I  ++      P+V +Y ++      + +   
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A G+   M+ +G +P+ +TY++LI+ LC +G VDEA+ +L +M      PTV +Y + I 
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             C      E+IE++A M ++GC+PN  TY  LI G+   G    A+ L + ++
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 96/197 (48%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  +++   P  +    +I A   +  +    +FL+ +   G    + + NT+L    K 
Sbjct: 159 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 218

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              + A  +++++ + G  P++ ++NT+ + L   G    A  ++S++    + PD  TY
Sbjct: 219 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTY 278

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SLI   CR+  +D A G+   M      P  ++Y+ +I G C   R++E++++L  M E
Sbjct: 279 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 338

Query: 468 KGCKPNETTYVLLIEGI 484
           KG +P   TY L I  +
Sbjct: 339 KGIEPTVYTYTLPITAL 355



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G+F E+   ++ M   G  PD  +   L+    +  + + A+++   +E  G +  + 
Sbjct: 801 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 860

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI   CKA Q+E A  + D +  + ++ D + + +++  L   G ++   K+   +
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
              N  P + TY IL +     G++ ++  L D++ + K
Sbjct: 921 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 959


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 235/503 (46%), Gaps = 55/503 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  L+    R G   ++   +ESM A G +PD+     L     Q  K ++A R+ +
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKD 337

Query: 97  ILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            +E+     PDV  YN L+    K      A ++L+ +R +G  P +VT+NI++ SLC  
Sbjct: 338 EMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +E A    +++  +   P VITY  LI A    G   KA  L+DEM            
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                 +CK      A + + S   RG  PD +SY  ++         E   +L  +MI 
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R L P++ TY+ LI  LCR  + ++A+D L    EKGL PD  +Y+ +I AYCK+G L+ 
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A  F + M+ +   PD+V  NT++   C +G  D+AL++FE   + G   +V +YNT+  
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQ 637

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL---------- 427
           ++   GD   AL    +M  KG++PD  TYN ++S L   G  +EA  +L          
Sbjct: 638 SMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS 697

Query: 428 ---------------VDMESTRFRPTVIS-----------YNIIILGFCKTRRINESIEV 461
                           D++    +P   S           Y   + G C   ++ E+  V
Sbjct: 698 QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAV 757

Query: 462 LAAMFEKGCKPNETTYVLLIEGI 484
           L  M +KG   + +TY+ L+EG+
Sbjct: 758 LDEMMQKGMPVDSSTYITLMEGL 780



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 238/488 (48%), Gaps = 19/488 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+      G   ++L  + +M   G  PD V    L+    ++    +A  ++  ++
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P    YN L+S F +   I+ A KV++ + + GF PD+ TYN++   LC  G ++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330

Query: 159 SAFKVFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
            AF++ D++ R     P V+TY  L+ A      +  A++LL+EM               
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK+G + +A   +  +   G  PDVI+YN L+      G   +   LM EM+ +GL
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           + +  T + ++ +LC+  + EDA ++L +  ++G  PD  SY  +++AY K+   + A+ 
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             D MI    +P I  YNT++   C+     +A++   +L + G  P+ ++YN +  A  
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             GD   A    ++M+    +PD +T N+L++ LC  G +D+A+ L         +  VI
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN +I   CK   ++ ++     M  KG +P+  TY +++  +   G   EA  + + L
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 501 VSMHAISR 508
                +S+
Sbjct: 691 ADSGKLSQ 698



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 218/441 (49%), Gaps = 53/441 (12%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E    P+ + +N L+   C    +  A   L  ++  G SPD VTYN ++ + C +GM
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  A  +  ++ RD   PT  TY  L+ A    G   +A K+++ M              
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQ-PDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              G+C+ G V +AF+    +E      PDV++YN L+          +  +L+ EM  +
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G++P +VT++I++ SLC++GK E+A+  L    E+GL PD  +Y+ LI AYCK G +  A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 319 IEFLDYMISDGC-----------------------------------LPDIVNYNTILAA 343
              +D M+  G                                    +PD V+Y T++AA
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K  N + AL +++++ +    P++S+YNT+   L        A+  ++E++ KG+ PD
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPD 558

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E TYN +I   C++G ++ A      M    F+P V++ N ++ G C   ++++++++  
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE 618

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
           +  EKG K +  TY  LI+ +
Sbjct: 619 SWVEKGKKVDVITYNTLIQSM 639



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 198/458 (43%), Gaps = 90/458 (19%)

Query: 49  RAGKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           +AGK DE+    + M   +   PDVV    L+   F+ R S+ A+R++E +   G +P +
Sbjct: 325 QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N ++   CK  ++E A   L+++   G +PDV+TYN +I + C  G +  AF + D+
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 167 L---------------LRDNCK--------------------PTVITYTILIQATMLEGQ 191
           +               L + CK                    P  ++Y  ++ A   E  
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            + A++L D+M                 G+C+   + +A   +  L  +G  PD  +YN+
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++      G  E   +   +M+    +P+VVT + L++ LC  GK + A+ +  +  EKG
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D  +Y+ LI + CK G +D A+ F D M   G  PD   YN +L+A  + G +++A 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 355 EIFEKLSDVG-------CP------------------PNVSS-----------YNTMFSA 378
            +  KL+D G       CP                  P   S           Y    + 
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           L + G    A  ++ EM+ KG+  D  TY +L+  L +
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 7/304 (2%)

Query: 213 AFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKW--EEGEKLMTEMISRGLEPNVVTYSI 269
           A Q + SL  R G +P + + N +L  L        +    +   +I   L PN  T+++
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+ + C  G   DA+  L   +  GL+PDA +Y+ L++A+C+ G L  A   L  M  DG
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P    YNT+++AF + G   QA ++ E ++  G  P++ +YN +   L  +G    A 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 390 GMISEM--LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
            +  EM  LS  + PD +TYN+L+    +     +A+ LL +M     +PT++++NI++ 
Sbjct: 334 RLKDEMERLSTAL-PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
             CK  ++ E++  L  + E+G  P+  TY  LI+     G  A+A  L + +V    + 
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG-KGLK 451

Query: 508 RDTF 511
            DTF
Sbjct: 452 MDTF 455



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 19/227 (8%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           ET +  +I    + G  + +  F   MV N  KPDVV C  L+       K +KA+++ E
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE 618

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +EK  + DV  YN LI   CK   ++ A    D +  +G  PD  TYN+++ +L   G
Sbjct: 619 SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678

Query: 156 MIESAFKVFDQLLRDN----------CKPT------VITYTILIQATMLEGQTDKAMKLL 199
             E A  +  +L               KP+      V  +    +A   E   D A++  
Sbjct: 679 RSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETY 738

Query: 200 DEM--GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
            E   G+C  G + +A   +  +  +G   D  +Y  L+  L+   K
Sbjct: 739 MERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 225/420 (53%), Gaps = 18/420 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           +++L+    M+     P +V   KL+    + +     + + + +E    E DVF +N L
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ F +  +++ A  VL ++   GF PD VT++ +I  LC       A + FD+++    
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGY 185

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           +P + TY  +I+     G+T  A+ LL +M                 G+CK  +V +A  
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALD 245

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               ++ +G +PDV +Y++L+  L N  + EE   L  EM+S  + P+VVT++IL+  LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G   +A  +++   EKG+ P+  +Y+ L++ YC   ++  A    D MI+ GC+P++V
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN ++  +CK    D+A E+F+++S  G  PN  +YNT+ S L  +G    A  +  +M
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            ++G  PD +T   L+  LC+ G +D A+ L   M+ +  +P +++Y+I+I    K+ +I
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 186/358 (51%), Gaps = 19/358 (5%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F+     F  LI       KF  ++ F + MVA+G +P++     +IK F +  K+  
Sbjct: 148 LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTV 207

Query: 91  AVRVMEILEKY-GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV +++ ++K  G PD+  YN +I G CK   +  A  +   ++ +G  PDV TY+I++ 
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC+    E A  +F++++  N  P V+T+ IL+         DK         +CK+GM
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV---------DK---------LCKEGM 309

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   ++ +  +G +P+  +YN L+       K  E   +   MI++G  PNVV+Y+I
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C+  + ++A ++      +GL P+ ++Y+ LIS  C+ GR   A E    M + G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           C PD+V    +L + CK G  D AL +F  + D    PN+ +Y+ +  A++ SG   R
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 190/405 (46%), Gaps = 18/405 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++ K+  P +  ++ L+S   +         +  R+       DV  +NI+I       
Sbjct: 74  HMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQ 133

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            ++ AF V  ++++   +P  +T++ LI     E +  +AM+  DEM             
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM------------- 180

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                 + G QP++ +YN +++    +GK      L+ +M   G  P++V Y+ +I  LC
Sbjct: 181 -----VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +D    +A+D+    K KG+ PD ++Y  L+   C   + + A    + M+S   +PD+V
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N ++   CK G   +A  I + + + G  PN ++YN++ +          A  +   M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           ++KG  P+ ++YN LI+  C+   +DEA  L  +M      P   +YN +I G C+  R 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+ E+   M  +GC P+  T  +L++ +   G+   A+ L  A+
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 19/360 (5%)

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           CS   IE A   F+ ++  +  P ++ +  L+ A                  + +    G
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSA------------------LVRIKHYG 101

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                 + +E    + DV  +N+L+     + + +    ++ ++I  G EP+ VT+S LI
Sbjct: 102 TVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLI 161

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC + K   A++        G  P+ ++Y+ +I  +CK G+  +A+  L  M   G  
Sbjct: 162 NGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGR 221

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDIV YNTI+   CK+    +AL+IF ++   G  P+V +Y+ +   L +S  K  A  +
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            +EM+S  I PD +T+N L+  LC++GM+ EA G++  M      P   +YN ++ G+C 
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             ++ E+  V  AM  KGC PN  +Y +LI G        EA EL + + S   +  +TF
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM-SFRGLIPNTF 400


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 242/489 (49%), Gaps = 28/489 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P+ H  S+++    F K IKR       D++L   + M+ +   P ++   K++  F + 
Sbjct: 271 PDVH--SYNIMINGFCK-IKR------VDKALNLFKEMILSRFPP-IIQFNKILDSFAKM 320

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           +  + AV +   LE  G +PD+F  N LI+ FC   QI     VL ++  RG+ P  VT 
Sbjct: 321 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTL 380

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           N +I  LC +G ++ A    D+LL    +   ++Y  LI      G T  A+KLL ++  
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                           +CK  +V +A+     +  +G   DV++Y+ L+     +GK +E
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              L+ EM+ + + P+V TY+IL+ +L ++GK ++A  VL    +  + PD ++Y+ L++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            Y     +  A    + M   G  PD+  Y  ++  FCK+   D+AL +F+++      P
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  +Y+++   L  SG       +I EM  +G   D ITYNSLI  LC++G +D+A+ L 
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M+    RP   ++ I++ G CK  R+ ++ EV   +  KG   +   Y ++I G    
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQ 740

Query: 488 GWRAEAMEL 496
           G   EA+ +
Sbjct: 741 GLLEEALTM 749



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 237/506 (46%), Gaps = 52/506 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+   +  M+    K +V+  + L+  +F   +  KA  V   +   G  PDV 
Sbjct: 215 KEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 274

Query: 108 AYNALISGFCKANQIELA------------------NKVLD----------------RLR 133
           +YN +I+GFCK  +++ A                  NK+LD                RL 
Sbjct: 275 SYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 334

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +G  PD+ T NI+I   C  G I   F V  ++L+    P+ +T   LI+   L+GQ  
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVK 394

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           KA+   D++                 G+CK G    A + +R ++ R  +P+V  Y+ ++
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII 454

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L       E   L +EM  +G+  +VVTYS LI   C  GK ++A+ +L     K + 
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN 514

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  +Y  L+ A  K+G++  A   L  M+     PD+  YNT++  +       +A  +
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F  +S +G  P+V +Y  + +    S     AL +  EM  K + PD +TY+SL+  LC+
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +     L+ +M        VI+YN +I G CK   ++++I +   M ++G +PN  T
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694

Query: 477 YVLLIEGIGYGGWRAEAMELANALVS 502
           + +L++G+  GG   +A E+   L++
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLT 720



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 215/429 (50%), Gaps = 21/429 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     G+  ++L+F + ++A G + + V    LI    +   +  A++++  ++ + 
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y+ +I   CK   +  A  +   +  +G S DVVTY+ +I   C  G ++ A 
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + ++++     P V TYTIL+ A   EG+  +A  +L  M                   
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM------------------- 543

Query: 222 SRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            + C +PDV +YN L+   L + + ++ + +   M   G+ P+V TY+ILI+  C+    
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A+++ +   +K + PD  +Y  L+   CK GR+    + +D M   G   D++ YN++
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSL 663

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CKNG+ D+A+ +F K+ D G  PN  ++  +   L   G    A  +  ++L+KG 
Sbjct: 664 IDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
             D   YN +I   C+ G+++EA+ +L  ME     P  ++++III    K    +++ +
Sbjct: 724 HLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEK 783

Query: 461 VLAAMFEKG 469
           +L  M  +G
Sbjct: 784 LLRQMIARG 792



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 233/496 (46%), Gaps = 22/496 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    R G    ++ F+  +     KP+V M   +I    + +  ++A 
Sbjct: 94  FQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAY 153

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E+  K    +V  Y+ LI GFC   +++ A  +L+ +  +  +P+V TYNI++ +L
Sbjct: 154 GLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL 213

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  V   +L+   K  VITY+ L+    L  +  KA  + + M         
Sbjct: 214 CKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 273

Query: 203 --------GMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                   G CK   V +A   F   + SR   P +I +N +L +   M  +     L  
Sbjct: 274 HSYNIMINGFCKIKRVDKALNLFKEMILSRF--PPIIQFNKILDSFAKMKHYSTAVSLSH 331

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            +  +G++P++ T +ILI+  C  G+      VL    ++G  P   + + LI   C  G
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           ++  A+ F D +++ G   + V+Y T++   CK G+   A+++  K+      PNV  Y+
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 451

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+  AL        A G+ SEM  KGI  D +TY++LI   C  G + EA+GLL +M   
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P V +Y I++    K  ++ E+  VLA M +   KP+  TY  L+ G        +A
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKA 571

Query: 494 MELANALVSMHAISRD 509
             + NA+ S+  ++ D
Sbjct: 572 QHVFNAM-SLMGVTPD 586



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 207/480 (43%), Gaps = 92/480 (19%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL ++  RG+ PD VT N +I  LC +G ++ A    D+LL    +   ++Y  LI    
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             G T  A+K L ++                  +CK  +V +A+     +  +G   +V+
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL--- 287
           +Y+ L+     +GK +E   L+  M+ + + PNV TY+IL+ +LC++GK ++A  VL   
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 288 --------------------------------RAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                                            A    G+TPD +SY+ +I+ +CK  R+
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289

Query: 316 DLAIEFLDYMISD----------------------------------GCLPDIVNYNTIL 341
           D A+     MI                                    G  PD+   N ++
Sbjct: 290 DKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILI 349

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC  G       +  K+   G PP+  + NT+   L   G   +AL    ++L++G +
Sbjct: 350 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 409

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            ++++Y +LI+ +C+ G    A+ LL  ++    +P V  Y+ II   CK + ++E+  +
Sbjct: 410 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 469

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
            + M  KG   +  TY  LI G    G   EA+ L N +V +  I+ D      RT+ +L
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV-LKTINPDV-----RTYTIL 523



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 189/386 (48%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    + G    ++  +  +     KP+V M + +I    + +  ++A 
Sbjct: 408 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 467

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E+  K    DV  Y+ LI GFC   +++ A  +L+ +  +  +PDV TY I++ +L
Sbjct: 468 GLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
              G ++ A  V   +L+   KP V TY  L+   +L  +  KA  + + M         
Sbjct: 528 GKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDV 587

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK  MV +A    + +  +   PD ++Y+ L+  L   G+      L+ E
Sbjct: 588 HTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDE 647

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG   +V+TY+ LI  LC++G  + A+ +    K++G+ P+ +++  L+   CK GR
Sbjct: 648 MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 707

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A E    +++ G   D+  YN ++   CK G  ++AL +  K+ + GC PN  +++ 
Sbjct: 708 LKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDI 767

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           + +AL+   +  +A  ++ +M+++G+
Sbjct: 768 IINALFKKDENDKAEKLLRQMIARGL 793



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 151/300 (50%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            GK  E++  +  MV     PDV   T L+    +E K  +A  V+ ++ K   +PDVF 
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L++G+    +++ A  V + +   G +PDV TY I+I   C   M++ A  +F ++ 
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           + N  P  +TY+ L+      G+      L+DEM                 G+CK G + 
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLD 674

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ +G +P+  ++ +LL  L   G+ ++ +++  +++++G   +V  Y+++I
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMI 734

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C+ G  E+A+ +L   +E G  P+A ++D +I+A  K    D A + L  MI+ G L
Sbjct: 735 YGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 6/282 (2%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++T+++ RG  P+ VT + LI  LC  G+ ++A+        +G   +  SY  LI+  C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G    AI+FL  +      P++  YNTI+ A CK     +A  +F +++  G   NV 
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+T+       G    ALG+++ M+ K I P+  TYN L+  LC++G V EA  +L  M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                +  VI+Y+ ++ G+     + ++  V  AM   G  P+  +Y ++I G       
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289

Query: 491 AEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLAT 532
            +A+ L   ++    +SR  F  + +   +LD + ++ H +T
Sbjct: 290 DKALNLFKEMI----LSR--FPPIIQFNKILDSFAKMKHYST 325



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 10/257 (3%)

Query: 281 EDAVD--VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +DAV   VL    ++G  PD  + + LI   C  G++  A+ F D +++ G   + V+Y 
Sbjct: 43  DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYA 102

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   C+ G+   A++   K+      PNV  YNT+  AL        A G+ SEM  K
Sbjct: 103 TLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI  + +TY++LI   C  G + EA+GLL  M      P V +YNI++   CK  ++ E+
Sbjct: 163 GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEA 222

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG--IGYGGWRAE----AMELANALVSMHA--ISRDT 510
             VLA M +   K N  TY  L++G  + Y   +A+    AM L      +H+  I  + 
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282

Query: 511 FKRLNRTFPLLDVYKEI 527
           F ++ R    L+++KE+
Sbjct: 283 FCKIKRVDKALNLFKEM 299


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 17/426 (3%)

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R   +L +  +P++  YNA+I+  CK   +  A  ++ ++     SPD  TY  MI   C
Sbjct: 202 RYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC 261

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
            +  ++SA +VF+Q+ ++ C+P  +TY+ LI      G+ ++A  L+ EM          
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C  G    A++    ++++GC+P+V +Y  L+  L   G  +    L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN VTY+ LI+ L  + + + A  VL      G +P+  +Y+ +I  YC  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+  ++ M+  G   ++V YNTI+  +C +GN   AL I + + D GC P+  SY  +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                       A G+ +EM+  G+ P+E+TY +LI   C+D  +D A  LL  M+ +  
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           RP V +YN++I G  K    + + E+   M E+G  PN  TY  +I+G+   G  + A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 496 LANALV 501
           + N ++
Sbjct: 622 MFNKMI 627



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 214/436 (49%), Gaps = 19/436 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G+ +E+   I  M+ +G  P    CT  I           A R+   ++  G EP+V+ 
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y ALISG C +  +++A  +  R+   G  P+ VTYN +I  L     I+ AF V + + 
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R+ C P ++TY  +I+   + G   KAM +++ M                    RG   +
Sbjct: 418 RNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM------------------LQRGHSAN 459

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN +++   + G      +++  M   G +P+  +Y+ LI   C+  K E A  +  
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              + GL P+  +Y  LI  YCKD +LD A   L++M   GC P++  YN ++    K  
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A E+ + + + G  PNV +Y  M   L  +G    AL M ++M+ +G  P+ +TY+
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI  L ++G V+EA  L  ++E     P  I+Y  +I  +  + ++  +   L  M + 
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 469 GCKPNETTYVLLIEGI 484
           GC+P   TY +LI+G+
Sbjct: 700 GCQPTLWTYGVLIKGL 715



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 222/480 (46%), Gaps = 42/480 (8%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQ 121
           M  NGC P++V   ++IK +       KA+ VM  +L++    ++  YN +I G+C +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A ++LD +R  G  PD  +Y  +I   C    +ESAF +F++++ D   P  +TYT 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI     + + D A  LL+ M                 G+ K+     A +  + +   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+V++Y  ++  L   G      ++  +MI +G  PN++TYS LI +L ++GK E+A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI---- 340
           ++    +  GL PD  +Y  +I AY   G+++ A  FL  MI  GC P +  Y  +    
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 341 ----------LAAF------CKNG----NADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
                     LAA       C  G    + D    +  KL+++    +V   N + S L 
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           ++G    A  ++  M+S+G+ PD+  YNSL+  L R   VD A+G+   M +      + 
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            Y  +I   C+  R  E+      M  +   P++    +LI+G+   G++   ME  + +
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 193/435 (44%), Gaps = 45/435 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  + +LI    +  K + +      MV +G  P+ V  T LI  + ++ K + A  ++E
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++ G  P+V  YN LI G  K N    A ++   +   G  P+VVTY  MI  LC  G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A ++F++++   C P ++TY+ LI+A   EG+ ++A  L  E              
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE-------------- 660

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL- 274
               LE  G  PD I+Y  ++   +  GK E     +  MI  G +P + TY +LI  L 
Sbjct: 661 ----LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 275 -------------------CRDG---KTEDAVDVLRAAKEKGLTP--DAYSYDPLISAYC 310
                              C  G     +DAV V+ +AK   L P       + L+S   
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM-SAKLAELDPGLSVQVQNALVSNLS 775

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A E L  MIS G  PD   YN++L +  +  N D A+ +F+ +S  GC  +++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            Y  +  AL     +  A      ML +   PD++    LI  L RDG  D  +  L  M
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895

Query: 431 ESTRFRPTVISYNII 445
           E+ R+ P+   Y I+
Sbjct: 896 ETRRYMPSFHIYTIL 910



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 35/325 (10%)

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           K  + +   F+  L   G +  + +Y+ LL  L  +G           M+S G++PN++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I++LC+DG   DA  +++   E  ++PD ++Y  +I  +C+   LD A++  + M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEI------------------------------ 356
            +GC P+ V Y+T++   C +G  ++A ++                              
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 357 -----FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                F  + + GC PNV +Y  + S L  SG    A+G+   M   G+ P+ +TYN+LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + L  +  +  A  +L  M      P +++YN +I G+C      +++ V+  M ++G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
            N  TY  +I+G    G    A+ +
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRI 482



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +T   +D+L    + GL    ++Y  L+    + G     ++    M+S+G  P+++ Y
Sbjct: 162 ARTMSFLDML---SQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A CK+GN   A  I +K+ +    P+  +Y +M        D   AL + ++M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G EP+ +TY++LI+ LC  G V+EA  L+ +M      PT  +    I+  C      +
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +  +   M  KGC+PN  TY  LI G+   G    A+ L       H +SRD
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL------FHRMSRD 384



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 104/284 (36%), Gaps = 47/284 (16%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK---------------- 80
           E  ++K+I+    +GK + +  F+  M+  GC+P +     LIK                
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729

Query: 81  -------KFFQERKSNKAVRVMEILEKYGEPD----VFAYNALISGFCKANQIELANKVL 129
                   F  +     AV VM    K  E D    V   NAL+S    A +   AN++L
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMS--AKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             + S+G  PD   YN ++ SL     ++ A  VF  +    C+  +  Y  LI A    
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            +  +A    + M                 G+ + G      +F+  +E+R   P    Y
Sbjct: 848 HRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIY 907

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            +L R       W+     +T+ + R       T     SSL R
Sbjct: 908 TILAREASKKRSWKHVAGCITK-VKRATCSTSCTGQCFCSSLSR 950


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 226/464 (48%), Gaps = 19/464 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F  ++    +   +  ++   + M   G  P +V  + LI  +        A  V+ +
Sbjct: 79  VEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGM 138

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G + +      ++ G C   ++  A +  D + ++GF  D VTY  +I  LC  G+
Sbjct: 139 VLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGL 198

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              AF++  ++     +P V+ Y +++                   G+CK G+V +A   
Sbjct: 199 TREAFELLHKMEGQVVRPNVVIYNMIVD------------------GLCKDGLVTEARDL 240

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              +  RG  PDV +Y  L+     +G+W E  +L+ +M+ R +  NV TY+ILI +LC+
Sbjct: 241 YSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCK 300

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G    A D+     E+G  PD  +++ L+S YC    +  A +  D     G  PD+ +
Sbjct: 301 KGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS 360

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++  +CKN   D+AL +F K++     PN+ +Y+++   L  SG    A  + S + 
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  P+ ITYN ++  LC+  +VD+A+ L   M      P V SYNI+I G+CK++RI+
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRID 480

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           E++ +   M  +   P+  TY  LI+G+   G  + A EL N +
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVM 524



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 190/406 (46%), Gaps = 19/406 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAY 109
           G+  ++L F +S+VA G   D V    LI    +   + +A  ++  +E +   P+V  Y
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++ G CK   +  A  +   +  RG  PDV TY  +I   C  G      ++   ++ 
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            N    V TY ILI A                  +CKKGM+G+A      +  RG +PD+
Sbjct: 282 RNVNLNVYTYNILIDA------------------LCKKGMLGKAHDMRNLMIERGQRPDL 323

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +++N L+          E  KL       G+ P+V +Y+ILI   C++ + ++A+ +   
Sbjct: 324 VTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNK 383

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K L P+  +Y  LI   CK GR+  A E    +   G  P+++ YN +L A CK   
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+E+F  + + G  PNVSSYN + +    S     A+ +  EM  + + PD +TYN 
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           LI  LC+ G +  A  L   M        VI+YNI+   F K + +
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 187/427 (43%), Gaps = 87/427 (20%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           I+ A  +F +L+  +  P+V+ + +++ + +       A+ L  +M              
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 203 --------------------------------------GMCKKGMVGQAFQFVRSLESRG 224
                                                 G+C  G V +A +F  S+ ++G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
              D ++Y  L+  L  +G   E  +L+ +M  + + PNVV Y++++  LC+DG   +A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 285 DVLRAAKEKGLTPD-----------------------------------AYSYDPLISAY 309
           D+      +G+ PD                                    Y+Y+ LI A 
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G L  A +  + MI  G  PD+V +NT+++ +C   +  +A ++F+  ++ G  P+V
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            SYN +      +     AL + ++M  K + P+ +TY+SLI  LC+ G +  A  L   
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           +      P VI+YNI++   CK + ++++IE+   MFE+G  PN ++Y +LI G      
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 490 RAEAMEL 496
             EAM L
Sbjct: 479 IDEAMNL 485



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 35/275 (12%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V+ +NM+L +++ M  +     L  +M  RG+ P++VT SILI+  C  G    A  V
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    ++G   +A +   ++   C +G +  A+EF D +++ G L D V Y T++   CK
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G   +A E                                   ++ +M  + + P+ + 
Sbjct: 196 IGLTREAFE-----------------------------------LLHKMEGQVVRPNVVI 220

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN ++  LC+DG+V EA  L  D+      P V +Y  +I GFC   +  E   +L  M 
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           ++    N  TY +LI+ +   G   +A ++ N ++
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 221/437 (50%), Gaps = 21/437 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PD+V    +I    +E++  KAV ++  +E    EP+ F Y  L+ G CK  ++E A ++
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L  ++ +G   DVV Y+ +I   CS+G ++    +FD++L     P V+ Y+ LI     
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN---- 123

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G CKKG+  +A   + ++  RG QPDV +Y  ++  L   G+  + 
Sbjct: 124 --------------GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKA 169

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L   M  +G EP+ VTY++LI+ LC++G   DA  +     EKG   +  SY+ LI  
Sbjct: 170 LDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229

Query: 309 YCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
            C +G+LD A++    ++ DG    PD++ +NT++   CK G  D+A+EI++ + + G  
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            N+ + + +      SG   +A+ +   +   G+ P   TY+ +I   C+  M++ A GL
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              M+ +   PT+  YN ++   CK   + ++  +   M E  C+P+  ++ ++I+G   
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 487 GGWRAEAMELANALVSM 503
            G    A EL N +  M
Sbjct: 410 AGDIHSAKELLNDMQQM 426



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 222/461 (48%), Gaps = 21/461 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+ +E++  +  M   G + DVV+ + LI  F  +   ++   +  E+LEK   P+V 
Sbjct: 57  KEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI+GFCK      A  VL  +  RG  PDV TY  MIG LC  G    A  +FD +
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                +P+ +TY +LI                   G+CK+G +G AF+   ++  +G + 
Sbjct: 177 TEKGEEPSTVTYNVLIN------------------GLCKEGCIGDAFKIFETMLEKGKRL 218

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRG--LEPNVVTYSILISSLCRDGKTEDAVD 285
           +V+SYN L+  L N GK +E  KL + ++  G  +EP+V+T++ +I  LC++G+ + AV+
Sbjct: 219 EVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVE 278

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +     E+G   + ++   LI  Y K G +D A+E    +   G +P    Y+ ++  FC
Sbjct: 279 IYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFC 338

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K    + A  +F ++   G  P +  YNT+ ++L       +A  +  EM     EPD I
Sbjct: 339 KMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTI 398

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           ++N +I    + G +  A  LL DM+     P   +Y+  I    K  ++ E+     +M
Sbjct: 399 SFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSM 458

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
              G  P+   Y  LI+G G      E + L   +  M  I
Sbjct: 459 IASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVI 499



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 23/442 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI    + G + E+   + +M   G +PDV   T +I    ++ ++ KA+ + +++ EK 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP    YN LI+G CK   I  A K+ + +  +G   +VV+YN +I  LC+ G ++ A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 162 KVFDQLLRDN--CKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           K+F  LL D    +P VIT+  +IQ    EG+ DKA+++ D M                 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
              K G++ +A +  + +   G  P   +Y++++     M      + L + M   GL P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            +  Y+ L++SLC++   E A  + +  KE    PD  S++ +I    K G +  A E L
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   G  PD   Y++ +    K G  ++A   F+ +   G  P+   Y+++      +
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            +    + ++ +M   G+  D    NS+++ LC        + LL +  S     T IS 
Sbjct: 481 DEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISC 540

Query: 443 NIIILGFCKTRRINESIEVLAA 464
           + +++   K ++ N  +++ AA
Sbjct: 541 DKLLM---KIQKFNPKLQISAA 559



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 109/211 (51%)

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K   + PD  SY+ +I+  CK+ RL+ A++ L  M    C P+   Y  ++   CK G  
Sbjct: 2   KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++A+ +  ++   G   +V  Y+T+ S   S G   R   +  EML KGI P+ + Y+ L
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  C+ G+  EA  +L  M     +P V +Y  +I G CK  R  +++++   M EKG 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +P+  TY +LI G+   G   +A ++   ++
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETML 212



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M+     P ++SYN II G CK +R+ +++++L  M    C+PN  TY +L++G+   G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 490 RAEAMEL 496
             EAM L
Sbjct: 61  VEEAMRL 67


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 249/485 (51%), Gaps = 25/485 (5%)

Query: 39  QFMKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           Q   ++ RS  A G  D ++   +S+      PD +  + L+    ++ + + A+ +++ 
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRG 155
           + + G +PDV  YNAL+ G  KA + E   +V D+L +  G  P++ TYN+M+  LC  G
Sbjct: 219 MPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             +   +V+++++ +N +P VITY ILI      G  D A ++  E+             
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+ G V +A++F  S    G + ++ +YN++++ L + G  +E  +L  +++ +
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEK 396

Query: 259 GLE--PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +   P+ VT+  LI  LC++G    A  +   A+  G   D +SY  +I+  C  GRL 
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++  + M  DGC P+   YN +++ FC+      A+ I+ K++D GC P V +YNT+ 
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L  +     A  +  EM+  G  PD  TY SLI  L  D  +D+A+ +   +     +
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTYVLLIEGIGYGGWRAEAME 495
             V+ +NI+I G C   +++E++ V + M E K C PN  TY  L++G+   G+  +A  
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 496 LANAL 500
           L  ++
Sbjct: 637 LWTSI 641



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 211/423 (49%), Gaps = 25/423 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G+F E     E MVAN  +PDV+    LI    +    + A RV  EI++     D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSP--DVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           N+L+ GFC+A +++ A K  D   S GF+   ++ TYNIMI  L   GM++ A +++D L
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWD---SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +D  C P  +T+  LI      G  +KA  + +E                  G+C  G 
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    ++  GC+P+   YN L+     + +  +  ++ ++M   G  P V+TY+ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  LC+  K ++A  V R   E G TPD  +Y  LI     D ++D A+     ++  G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRA 388
              D++ +N ++   C  G  D+AL +F  + +   CPPN+ +YNT+   L+ +G   +A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             + + +   G+EPD I+YN+ I  LC    + E + LL ++ S    PTVI++NI++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 449 FCK 451
             K
Sbjct: 695 VIK 697



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 217/421 (51%), Gaps = 24/421 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSLCSRGMIES 159
           P + ++NAL+  F +A +   A+     L    F    +P++ TYNI++ SLC+RG ++ 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------MCKKGMVG 211
           A  +FD L R    P  ITY+ L+     + + D A+ LLDEM         +C   ++G
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236

Query: 212 QAFQ----------FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             F+          + + ++  G +P++ +YN++L  L   G+++E  ++   M++  L+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+TY ILI  LCR G  + A  V     + GL  DA  Y+ L+  +C+ GR+  A +F
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALW 380
            D     G L ++  YN ++     +G  D+A+E+++ L  DV C P+  ++ T+   L 
Sbjct: 357 WDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G   +A  +  E    G + D  +Y+S+I+ LC  G + +AV +   M+    +P   
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            YN +I GFC+  R ++++ + + M + GC P   TY  LI+G+       EA  +A  +
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 501 V 501
           V
Sbjct: 536 V 536



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 153/299 (51%), Gaps = 9/299 (3%)

Query: 209 MVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----ISRGLEPN 263
           M   A    R+L S  GC P + S+N LL   +   ++ + +     +      R + PN
Sbjct: 98  MPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPN 157

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY+I++ SLC  G  + AV +  + + + + PD  +Y  L+    K  RLD A++ LD
Sbjct: 158 LQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLD 217

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            M   G  PD+V YN +L    K G  ++ + +++KL  D G  PN+++YN M   L   
Sbjct: 218 EMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF 277

Query: 383 GDKIRALGMISE-MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           G + + +G + E M++  ++PD ITY  LI  LCR G VD A  +  ++  T        
Sbjct: 278 G-RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           YN ++ GFC+  R+ E+ +   +    G + N  TY ++I+G+   G   EA+EL + L
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL 394



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 18/268 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  +++   E M  +GCKP+  +   LI  F Q  +++ AVR+   +   G  P V  Y
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI G CKA + + A+ V   +   GF+PD+ TY  +I  L S   I+ A  ++ Q+L 
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY 572

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              K  V+ + ILI      G+ D+A+ +  +M                  E + C P++
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK-----------------EKKNCPPNL 615

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+  L   G  ++   L T +   GLEP++++Y+  I  LC   +  + + +L  
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDL 317
              +G+ P   +++ L+ A  K G + +
Sbjct: 676 VLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG----CPPNVSSYNTMFSALWSSGD 384
           GC P I ++N +L AF +      A   F  LS         PN+ +YN +  +L + GD
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA+ +   +  + + PD ITY++L+  L +   +D A+ LL +M  +  +P V+ YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 445 IILGFCKTRRINESIEVLAAMF-EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++ G  K     + + V   +  + G +PN  TY ++++G+   G   E  E+   +V+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 230/479 (48%), Gaps = 23/479 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G  D +   ++ M A+GC+P+VV+ T LIK F Q+ +   AVRV++ + + G  PD F 
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFC 492

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+LI G  KA +++ A   L  +   GF PD  TY   I      G   SA K   ++L
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                P  +  T LI     +G+  +A      M                 G+ K G V 
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A +    +  +G  PDV SY  L+     +G  ++   +  EM+  GL  NV+ Y++L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              CR G+ E A ++L     KG  P+A +Y  +I  YCK G L  A +  D M   G +
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y T++   C+  + ++A+ IFE  ++ GC  + + +N + + ++  G       M
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDM 791

Query: 392 ISEMLSKGIE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           I+ ++    +    P+++TYN +I  LC++G ++ A  L   M+     PTVI+Y  ++ 
Sbjct: 792 INRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLN 851

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           G+ K  R +E   V   +   G +P+   Y ++I      G   +A+ L + + + +A+
Sbjct: 852 GYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 221/476 (46%), Gaps = 19/476 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
           DE+L   +SM   G  P       LI    ++++   A  ++  +   G   D  AY+ L
Sbjct: 262 DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSIL 321

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I G  K    + AN ++  + S GFS D + Y+  I  +   G +E A  +FD ++    
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
            P    Y  LI+    E    K  +LL E+                 GMC  G +  A+ 
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V+ + + GC+P+V+ Y  L++T L   ++ +  +++ EM  +G+ P+   Y+ LI  L 
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  K ++A   L    E G  PDA++Y   IS Y + G    A +++  M+  G +P+ V
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
               ++  +CK G   +A   F  + + G   +  +Y  + + L  +G    A  +  EM
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             KGI PD  +Y +LI    + G + +A  +  +M        VI YN+++ GFC++  I
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            ++ E+L  M  KG  PN  TY  +I+G    G  AEA +L + +  +  +  D+F
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM-KLKGLVPDSF 736



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 182/405 (44%), Gaps = 38/405 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+     SMV  G   D    T L+    +  K N A  +   +   G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF+Y  LI GF K   ++ A+ + D +   G + +V+ YN+++G  C  G IE A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ D++      P  +TY  +I      G   +A +L DEM +  KG+V  +F +   ++
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL--KGLVPDSFVYTTLVD 743

Query: 222 S------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE-- 261
                              +GC      +N L+  +   GK E    L T+MI+R ++  
Sbjct: 744 GCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTE----LTTDMINRLMDGS 799

Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                 PN VTY+I+I  LC++G  E A ++    ++  L P   +Y  L++ Y K GR 
Sbjct: 800 FDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPPNVS 370
                  D +I+ G  PD + Y+ I+ AF K G   +AL + +++      D GC  ++S
Sbjct: 860 SEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +   + S     G+   A  ++  M+     PD  T   LI+  C
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 174/394 (44%), Gaps = 7/394 (1%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKV 163
           V  +  LI G+ +   ++ A  V    +       P +   N ++ +L  R  ++  + V
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQT----DKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           +  ++  N    V +Y +LI A   +G      D  +K  +E+G      V +A +  +S
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLN-VDEALELKKS 270

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  +G  P   SYN+L+  L    + E+ + L+ EM S GL  + V YSILI  L +   
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + A  ++      G + D   YD  I    K+G ++ A    D MI+ G  P    Y +
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  F +  N  +  E+  ++       +  +Y T    + SSGD   A  ++ EM + G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             P+ + Y +LI    +     +AV +L +M      P    YN +I+G  K ++++E+ 
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             L  M E G KP+  TY   I G    G  A A
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 52/276 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           ++G   E+    + M   G  PD  + T L+    +     +A+ + E  EK        
Sbjct: 712 KSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP 771

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFS----PDVVTYNIMIGSLCSRGMIESAFKVF 164
           +NALI+   K  + EL   +++RL    F     P+ VTYNIMI  LC  G +E+A ++F
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831

Query: 165 DQLLRDNCKPTVITYT-----------------------------------ILIQATMLE 189
             + + N  PTVITYT                                   ++I A + E
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G T KA+ LLD+M             F ++    GC+  + +   LL     +G+ E  E
Sbjct: 892 GMTTKALVLLDQM-------------FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 938

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           K++  M+     P+  T   LI+  C       A D
Sbjct: 939 KVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 118/292 (40%), Gaps = 40/292 (13%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGL--------------------EPNVVTYSIL 270
           S++ L   L N G  E+   ++  MI R                      +  V+ + IL
Sbjct: 99  SFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGIL 158

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGL--TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           I      G  ++AV V  + K+  L   P     + L+ A  K  RLDL  +    M+  
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVER 218

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             + D+ +Y  ++ A C++GN   A ++  K  +       ++ N              A
Sbjct: 219 NVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEE---ELGTATLNV-----------DEA 264

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +   M  KG+ P   +YN LI  LC+   +++A  LLV+M S       ++Y+I+I G
Sbjct: 265 LELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDG 324

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             K R  + +  ++  M   G   +   Y   I  +   G    AME A AL
Sbjct: 325 LLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEG----AMEKAKAL 372



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 50/315 (15%)

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD-GKTEDAVDVLRAAKEKGLTP 297
           +LN G W E   L++  +S  + P VV  S+L S    D  K     +++ + K      
Sbjct: 41  ILNQGNWRE--TLVSSNLSIEINPEVV-LSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKL 97

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDG------------CLPDIVN--------Y 337
           D++S+  L    C  G ++ A   +  MI               CL + V         +
Sbjct: 98  DSFSF--LALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLF 155

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCP--PNVSSYNTMFSALWSSGDKIRALGMISEM 395
             ++  + + G  D+A+ +F    D+     P+++  N +  AL           +   M
Sbjct: 156 GILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGM 215

Query: 396 LSKGIEPDEITYNSLISCLCRDGMV---------------------DEAVGLLVDMESTR 434
           + + +  D  +Y  LI   CRDG V                     DEA+ L   M    
Sbjct: 216 VERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKG 275

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P+  SYN++I G CK +R+ ++  +L  M   G   +   Y +LI+G+  G     A 
Sbjct: 276 LVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAAN 335

Query: 495 ELANALVSMHAISRD 509
            L + +VS H  S D
Sbjct: 336 GLVHEMVS-HGFSID 349


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 237/496 (47%), Gaps = 55/496 (11%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           + L   E M+ N   PDV  C +++K    +    KA+ V  ++ +YG  P V  YN ++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL---------------------- 151
             FCK  +++ A  ++ +++ RG  P  VT+N++I  L                      
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 152 -------------CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
                        C +G++  A  ++++++     PTV ++  ++     EG+   A + 
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L +M                 G C+ G +G+AF  +  L  R    ++++YN L+  L  
Sbjct: 365 LSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCR 424

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +G  E   KL  +MI+RG+ P+VVTY++L++  C+ G    A +        GL PD ++
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFA 484

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y   I    K G    A +  + M++ G  PD++ YN  +   CK GN ++A E+ +K+ 
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  P+  +Y +   A   +G       +  +MLS+G  P  +TY  LI     +G +D
Sbjct: 545 RDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLD 604

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A+   ++M+     P VI+YN++I GFCK R+++++ +    M EKG  PN+ TY +LI
Sbjct: 605 WAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILI 664

Query: 482 -EGIGYGGWRAEAMEL 496
            E    G W+ EA+ L
Sbjct: 665 NENCNMGKWQ-EALRL 679



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 202/440 (45%), Gaps = 62/440 (14%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            E YG  DV     LI G+     + +  K++   R+R F PDV   N ++  L  + ++
Sbjct: 168 FEMYGIVDV-----LIGGYLNYQCLLVFEKMM---RNR-FLPDVKNCNRILKILRDKNLL 218

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A +V+  +     +PTV TY  ++ +                   CK G V +A   V
Sbjct: 219 VKALEVYRMMGEYGIRPTVTTYNTMLHS------------------FCKGGEVQRALDLV 260

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             ++ RGC P  +++N+L+  L   G+ ++ + L+ EM   GL  +  TY+ LI   C+ 
Sbjct: 261 PKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKK 320

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G   +A+ +      +G++P   S++ ++  +CK+G++  A + L  M+    +PDI++Y
Sbjct: 321 GLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT++  FC+ GN  +A  + ++L       N+ +YNT+   L   GD   AL +  +M++
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440

Query: 398 KGIEPDEITYNSLISCLCRDG-------MVDE--AVGLLVD------------------- 429
           +GI PD +TY  L++  C+ G         DE   VGL  D                   
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 430 -------MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                  M +  F P VI+YN+ + G CK   + E+ E+L  M   G  P+  TY   + 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 483 GIGYGGWRAEAMELANALVS 502
                G   E  E+   ++S
Sbjct: 561 AHMENGHLREGREIFYDMLS 580


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 214/417 (51%), Gaps = 19/417 (4%)

Query: 104 PDVFAYNALISGFCKAN--QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           P +  +N ++    KAN      A  +  +L  +G +P +VT+NI++   C  G +  AF
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F ++L+    PT IT+  LI    L G+  +A+   D +                 G+
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G    A Q ++ +E +    DV+ YN+++ +L       +  +L +EMI++ + P+V
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT++ LI   C  G+ ++A  +      K + PD Y++  L+ A CKDG +  A   L  
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G +PD+V Y++++  +C     ++A  +F  +S +G  P+  SYN M + L     
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL +  EM  KGI PD +TYNSLI  LC+ G +  A  L+ +M +      +++YN 
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +I   CK   I+++I ++  + ++G +P+  TY +LI+G+  GG    A ++   L+
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 223/440 (50%), Gaps = 19/440 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L +      F  LI      GK  E+L+F + ++A G   D V    LI    +  ++  
Sbjct: 123 LGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRA 182

Query: 91  AVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+++++ +E K    DV  YN +I+  CK   +  A ++   + ++  SPDVVT+N +I 
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLIL 242

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             C  G ++ AF +F +++  N  P V T++IL+ A                  +CK G 
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA------------------LCKDGN 284

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   +  +  +G  PDV++Y+ L+     + +  + + + + M   G+ P+  +Y+I
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I+ L +    ++A+ + +    KG+ PD  +Y+ LI   CK GR+  A + +D M ++G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              DI+ YN+++   CKN + D+A+ + +K+ D G  P++ +YN +   L   G    A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  ++L KG   +  TYN +I+ LC++G+ +EA  LL  ME+    P  ++Y  II   
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 450 CKTRRINESIEVLAAMFEKG 469
            +     ++ ++L  M  +G
Sbjct: 525 FRKDENEKAEKLLREMIIRG 544



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 198/412 (48%), Gaps = 24/412 (5%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C+N K  E +              L F + +  +  LI    + G+   +L  ++ +   
Sbjct: 140 CLNGKLKEALHFHDHVIA------LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGK 193

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
               DVVM   +I    +++  + A ++  E++ K   PDV  +N+LI GFC   Q++ A
Sbjct: 194 LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEA 253

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +   +  +  +PDV T++I++ +LC  G I  A  +   +++    P V+TY+ L+  
Sbjct: 254 FGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDG 313

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             L  + +KA  +   M                 G+ K  MV +A    + +  +G  PD
Sbjct: 314 YCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD 373

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            ++YN L+  L  +G+     +L+ EM + G+  +++TY+ LI  LC++   + A+ +++
Sbjct: 374 TVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVK 433

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K++G+ P  Y+Y+ LI   CK GRL  A +    ++  G   +   YN ++   CK G
Sbjct: 434 KIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
             ++A  +  K+ + G  P+  +Y T+  AL+   +  +A  ++ EM+ +G+
Sbjct: 494 LFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFA 108
            G+  E+      MV     PDV   + L+    ++    +A  ++ ++ K G  PDV  
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y++L+ G+C  N++  A  V   +   G +P   +YNIMI  L    M++ A  +F ++ 
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVG 211
                P  +TY  LI      G+   A +L+DEM                  +CK   + 
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   V+ ++ +G QP + +YN+L+  L   G+ +  + +  +++ +G   N  TY+I+I
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMI 486

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC++G   +A  +L   +  G+ PDA +Y+ +I A  +    + A + L  MI  G L
Sbjct: 487 NGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 232/469 (49%), Gaps = 9/469 (1%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GKF+++   ++ M+  G  PD    TK+I    Q ++ +KA  + + ++K G  PDV+ Y
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  FCKA  IE A    D +RS G SP+VVTY  ++ +      +  A  +F +++ 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           D C P  ITY+ LI      G+  KA ++  ++ +     +   F F    ++    P+V
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKL-IGTSDNIESDFYF-EGKDTDTISPNV 608

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L+  L    K  +   L+  M++ G EPN + Y  L+   C+ G+ + A +V   
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             + G  P  ++Y  LI    KDGRLDLA++ L  M+ D C P++V Y  ++   CK G 
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++AL +   +   GC PNV +Y  +   L  +G     L +  +M +KG  P+ +TY  
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C  G++D+A  LL +M+ T +   +  Y   + GF  ++R   S+ +L  M    
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHD 846

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV----SMHAISRDTFKRL 514
             P    Y +LI+     G    A+EL   ++    S++  S+D    L
Sbjct: 847 TAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSL 895



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 230/515 (44%), Gaps = 75/515 (14%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           ++I     A  F+E++ F+  M  N   P+VV    L+  F ++++     R++ ++   
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTE 335

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR------ 154
           G  P    +N+L+  +C A     A K+ +R+ + G  P  V YNI IGS+C R      
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNP 395

Query: 155 -----------------------------------GMIESAFKVFDQLLRDNCKPTVITY 179
                                              G  E AF++  +++R    P   TY
Sbjct: 396 ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTY 455

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
           T +I       + DKA  L  EM                   CK G++ QA  +   + S
Sbjct: 456 TKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRS 515

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P+V++Y  LL   L   +  +   +   M+     PN +TYS LI  LC+ G+ + 
Sbjct: 516 AGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQK 575

Query: 283 AVDV----------------LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           A +V                        ++P+  +Y  L++  CK  ++  A + LD M+
Sbjct: 576 ACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAML 635

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + GC P+ + Y+ ++  FCK G  D A E+F +++  G  P+V +Y ++   ++  G   
Sbjct: 636 AAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD 695

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++S+ML     P+ +TY +++  LC+ G  ++A+ LL  ME     P V++Y  +I
Sbjct: 696 LAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALI 755

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            G  K  +++  +E+   M  KGC PN  TY +LI
Sbjct: 756 DGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 192/462 (41%), Gaps = 78/462 (16%)

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           L+ +G  P    YNAL+     A Q+E+A +V   + + GF  D  T      +LC  G 
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A    D L R++ K   +  T +I   M     ++AM  L  M              
Sbjct: 255 WGDAL---DLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRT 311

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G  KK  +G   + +  + + GC P    +N L+ T  N   +    KL   M + G
Sbjct: 312 LLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG 371

Query: 260 LEPNVVTYSILISS-----------------------------------------LCRDG 278
             P  V Y+I I S                                         LC  G
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E A  +++    KG  PDA +Y  +I+  C+  R+D A      M   G  PD+  Y 
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++ +FCK G  +QA   F+++   GC PNV +Y  +  A   S    +A  +   M+  
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 399 GIEPDEITYNSLISCLCRDGMVDEA-------VGLLVDMESTRF---------RPTVISY 442
              P+ ITY++LI  LC+ G + +A       +G   ++ES  +          P V++Y
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             ++ G CK ++++++ ++L AM   GC+PN+  Y  L++G 
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 31/313 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+ G+ D ++  +  M+ + C P+VV  T ++    +  ++ KA+ ++ ++E
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLME 740

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+V  Y ALI G  KA +++   ++  +++++G +P+ VTY I+I   C+ G+++
Sbjct: 741 KKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLD 800

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + D++ + +    +  Y   +Q      +   ++ LL+EM                
Sbjct: 801 DAHLLLDEMKQTHWPKYLQGYRTTVQG--FSKRFLASLGLLEEM---------------- 842

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT---YSILISSLC 275
             ES    P    Y ML+ +    G+ E   +L  EM+      N+ +   ++ LI +LC
Sbjct: 843 --ESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALC 900

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              + E+AV +    + +G+ PD  ++  L+    +  + + A++    +  +G     V
Sbjct: 901 LSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG-----V 955

Query: 336 NYNTILAAFCKNG 348
           N+      FC  G
Sbjct: 956 NWEG--NKFCDGG 966


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 228/486 (46%), Gaps = 18/486 (3%)

Query: 33   FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            F+        L+K  +      +++   + M   G   D      LI    + RK+  A+
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAI 1071

Query: 93   RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
            ++ E ++   + DVF Y  +I   CK      A  +   +   G  PDVV Y+ ++  LC
Sbjct: 1072 KLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131

Query: 153  SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
              G ++ A + F ++        V TY  LI      G   +    L+ M          
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191

Query: 203  -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   G+CK+G VG+A Q +  +  +G +PD+++YN L+  L  +G+ E+  KL   +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251

Query: 256  ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              RG++ NV +Y+ILI+  C+D K ++A       + KGL P   +Y+ LI A C+ GR+
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311

Query: 316  DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
              A +    M + G    +  Y  +L   CKNG+ ++A+++F+ +      PN+  ++ +
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 376  FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
               +  +G    A     E+   G+EPD I YN LI+ LC  GM+ EAV LL  ME    
Sbjct: 1372 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 1431

Query: 436  RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET-TYVLLIEGIGYGGWRAEAM 494
             P  I++N+II    K   I+E+I++L  M  +   P+E  T +LL        W A  +
Sbjct: 1432 LPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALV 1491

Query: 495  ELANAL 500
             L NAL
Sbjct: 1492 SLPNAL 1497



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 162/351 (46%), Gaps = 21/351 (5%)

Query: 152  CSRGMIE--SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            C  G+I+   A K+FD+ L     P   T+  L+ +                  + K G 
Sbjct: 920  CRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLAS------------------VAKLGY 961

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                F   R +   G QPD+ + N+L+    ++     G  +    + RG EP+ VT + 
Sbjct: 962  YSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTT 1021

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            L+  +  +    DAV +     +KGL  DA +Y  LI+  CK  +  LAI+  + M  + 
Sbjct: 1022 LVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN- 1080

Query: 330  CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            C  D+  Y  I+ A CK+G   +AL++F ++   G  P+V  Y+++   L   G    AL
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 390  GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
                EM  +GI  D  TYNSLI  L R G+  E    L  M    F P   ++ I+I G 
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 450  CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            CK  ++ E+ ++L  M  KG +P+  TY  L+ G+   G   +A +L  +L
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 148/344 (43%), Gaps = 88/344 (25%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  LI    RAG + E  +F+  MV  G  PD    T LI    +E K  +A +++E++ 
Sbjct: 1158 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217

Query: 100  KYG-EPD-----------------------------------VFAYNALISGFCKANQIE 123
              G EPD                                   VF+YN LI+G+CK  +I+
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277

Query: 124  LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ---------------LL 168
             A +  + +R +G  P  VTYN +IG+LC  G + +A K+F +               LL
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337

Query: 169  RDNCK--------------------PTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
               CK                    P +  ++IL+      G+ ++A K  DE+      
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397

Query: 203  -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       G+C KGM+ +A + +  +E +GC PD I++N++++ LL   +  E  +L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
            + EM +R   P+    S+L+     D +   A+  L  A +KG+
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 10/254 (3%)

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            P   T++ L++S+ + G       + R   + G+ PD Y+ + LI   C    +      
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 322  LDYMISDGCLPDIVNYNTIL-AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
                +  G  PD V   T++   + +NG  D A+++F++++  G   +  +Y  + + L 
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGLC 1062

Query: 381  SSGDKIRALGM---ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                K R  G+   + E +    + D  TY  +I  LC+DGM  EA+ +  +M      P
Sbjct: 1063 ----KARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILP 1118

Query: 438  TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             V+ Y+ ++ G C+  R+ E++E    M  +G   +  TY  LI G+   G   E     
Sbjct: 1119 DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFL 1178

Query: 498  NALVSMHAISRDTF 511
            N +V     S D F
Sbjct: 1179 NLMVD-RGFSPDAF 1191



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 11/236 (4%)

Query: 302  YDPLISAYCKDG--RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            ++  +   C+ G  +L+ AI+  D  +    +P    +N +LA+  K G       ++ K
Sbjct: 912  FERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRK 971

Query: 360  LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
            ++DVG  P++ + N +     S        G+    L +G EPD +T  +L+  +  +  
Sbjct: 972  INDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENG 1031

Query: 420  VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
            + +AV L  +M          +Y I+I G CK R+   +I++   M +  CK +  TY +
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGM 1090

Query: 480  LIEGIGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEI 527
            +I+ +   G   EA+++ + ++         +++   D   R  R    L+ +KE+
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 227/458 (49%), Gaps = 26/458 (5%)

Query: 49  RAGKFD-----ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY-G 102
           + GKFD       +Y    M+ +G +P ++    +I    ++ +  +A  +M  + +Y  
Sbjct: 176 QLGKFDMVDLARDMYI--KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+ F Y +LI G C+ + ++LA  + DR+   G  P+ VTY+ +I  LCS G +E A  
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + +++++   +PTV TYTI +                  + +C  G   +A + +  ++ 
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPL------------------VSLCDAGCSSEAVELLGKMKK 335

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RGC P++ ++  L+  L   GK+E    L  +M++ GL P  VTY+ LI+ LC +G+ E 
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET 395

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  + +     G  P   +Y+ +I  +C  G +  A+   D M+  G  P+++ YNT++ 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK GN + A+ + E +   G  P+  +Y  + S     G    A  +   M+  GI P
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TY ++I        VD+A+ L   M  +   P+  +YN++I GF KT  I+E+    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             M ++G  PN  TY   I+G+   G    A ++ + +
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 227/482 (47%), Gaps = 26/482 (5%)

Query: 28  THLLSFDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           +H+  +D     F    LI    R    D +    + MV +GC P+ V  + LI     E
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 86  RKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +  +A+ ++E +++K  EP V+ Y   +   C A     A ++L +++ RG  P++ T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             +I  L   G  E A  ++ ++L D   PT +TY  LI                    +
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ------------------L 387

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C +G    AF   + + S G  P   +YN +++    MG  ++   +  +M+  G  PNV
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+ LI   C+ G   +A+ +L   K  GL PDA++Y  LIS + + G+L+ A      
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  P+ V Y  I+  +      D AL +F K+ + G  P+  +YN M S    +  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A     +M+ +G+ P+ ITY S I  LCR+G    A  +  +ME   + P + +Y+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 445 IILGFCKTRRIN--ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I G C+  R    E   +LA +   GC+PN  TY  L++G+   G   EA +L   +VS
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQL---VVS 684

Query: 503 MH 504
           M 
Sbjct: 685 MQ 686



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 196/398 (49%), Gaps = 18/398 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N +I+  CK  +++ A  ++  +      P+  TY  +I   C    ++ AF +
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           FD++++D C P  +TY+ LI     EG+ ++AM +L+EM                    +
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM------------------VQK 301

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P V +Y + L +L + G   E  +L+ +M  RG  PN+ T++ LIS L RDGK E A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +       GL P   +Y+ LI+  C +GR + A     +M+S G LP    YN I+  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G+  +A+ IF+K+   G  PNV +YNT+       G+   A+ ++  M   G++PD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY  LIS   R G ++ A  L   M      P  ++Y  II G+    ++++++ +  
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            M E G  P+  TY ++I G       +EA      +V
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV 579



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 243/556 (43%), Gaps = 56/556 (10%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI      G+ +E++  +E MV  G +P V   T  +        S++AV 
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           ++  ++K G  P++  + ALISG  +  + E+A  +  ++ + G  P  VTYN +I  LC
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E+AF +F  +L     P+  TY  +I+   L G   KAM + D+M          
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK+G +  A + +  ++  G +PD  +Y  L+      GK E    L   M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  G+ PN VTY+ +I       K +DA+ +     E G  P + +Y+ +IS + K   +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE----------------- 358
             A  F   M+  G LP+++ Y + +   C+NG    A +IF                  
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628

Query: 359 --------------------KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
                               +L+  GC PNV +Y T+   L   G    A  ++  M  K
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P E  Y +L+   C++  V+ A+ +   M++  F+  +  Y  +I   CK   I E+
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH-AISRDTFKRLNRT 517
             +   M EK    +E  + +L++G+   G     ++L + + S +  ++  T+  L R 
Sbjct: 749 QCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808

Query: 518 FPLLDVYKEISHLATK 533
              LD   +I  ++ +
Sbjct: 809 LSALDCAIKIPQISQQ 824



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 20/365 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           + +LI    R GK + +      M+ +G  P+ V  T +I  +F   K + A+ +  +++
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P    YN +ISGF K N I  A     ++  +G  P+V+TY   I  LC  G   
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AFK+F ++ + N  P + TY+ LI     EG+ + A                + +  + 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA----------------EMYNLLA 648

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            L   GC+P+V +Y  L++ L   G+  E ++L+  M  +GL+P+   Y  L+   C++ 
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E A+++  +    G       Y  LI A CK+  ++ A      M+      D V + 
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWT 768

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L    K G  D  L++   +    C  N  +Y  M +   S+ D    +  IS+ L  
Sbjct: 769 VLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY-VMLARELSALDCAIKIPQISQQL-- 825

Query: 399 GIEPD 403
           GI  D
Sbjct: 826 GIVKD 830


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 17/426 (3%)

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R   +L +  +P++  YNA+I+  CK   +  A  ++ ++     SPD  TY  MI   C
Sbjct: 202 RYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC 261

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
            +  ++SA +VF+Q+ ++ C+P  +TY+ LI      G+ ++A  L+ EM          
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C  G    A++    ++++GC+P+V +Y  L+  L   G  +    L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN VTY+ LI+ L  + + + A  VL      G +P+  +Y+ +I  YC  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+  ++ M+  G   ++V YNTI+  +C +GN   AL I + + D GC P+  SY  +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                       A G+ +EM+  G+ P+E+TY +LI   C+D  +D A  LL  M+ +  
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           RP V +YN++I G  K    + + E+   M E+G  PN  TY  +I+G+   G  + A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 496 LANALV 501
           + N ++
Sbjct: 622 MFNKMI 627



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 217/446 (48%), Gaps = 19/446 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     +G+ +E+   I  M+ +G  P    CT  I           A R+   ++
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V+ Y ALISG C +  +++A  +  R+   G  P+ VTYN +I  L     I+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF V + + R+ C P ++TY  +I+   + G   KAM +++ M                
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM---------------- 451

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               RG   ++++YN +++   + G      +++  M   G +P+  +Y+ LI   C+  
Sbjct: 452 --LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E A  +     + GL P+  +Y  LI  YCKD +LD A   L++M   GC P++  YN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K  N   A E+ + + + G  PNV +Y  M   L  +G    AL M ++M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+ +TY+SLI  L ++G V+EA  L  ++E     P  I+Y  +I  +  + ++  +
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
              L  M + GC+P   TY +LI+G+
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 220/476 (46%), Gaps = 42/476 (8%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQ 121
           M  NGC P++V   ++IK +       KA+ VM  +L++    ++  YN +I G+C +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A ++LD +R  G  PD  +Y  +I   C    +ESAF +F++++ D   P  +TYT 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI     + + D A  LL+ M                 G+ K+     A +  + +   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+V++Y  ++  L   G      ++  +MI +G  PN++TYS LI +L ++GK E+A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI---- 340
           ++    +  GL PD  +Y  +I AY   G+++ A  FL  MI  GC P +  Y  +    
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 341 ----------LAAF------CKNG----NADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
                     LAA       C  G    + D    +  KL+++    +V   N + S L 
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           ++G    A  ++  M+S+G+ PD+  YNSL+  L R   VD A+G+   M +      + 
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            Y  +I   C+  R  E+      M  +   P++    +LI+G+   G++   ME 
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 195/443 (44%), Gaps = 45/443 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  + +LI    +  K + +      MV +G  P+ V  T LI  + ++ K + A  ++E
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++ G  P+V  YN LI G  K N    A ++   +   G  P+VVTY  MI  LC  G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A ++F++++   C P ++TY+ LI+A   EG+ ++A  L  E              
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE-------------- 660

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL- 274
               LE  G  PD I+Y  ++   +  GK E     +  MI  G +P + TY +LI  L 
Sbjct: 661 ----LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 275 -------------------CRDG---KTEDAVDVLRAAKEKGLTP--DAYSYDPLISAYC 310
                              C  G     +DAV V+ +AK   L P       + L+S   
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM-SAKLAELDPGLSVQVQNALVSNLS 775

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A E L  MIS G  PD   YN++L +  +  N D A+ +F+ +S  GC  +++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            Y  +  AL     +  A      ML +   PD++    LI  L RDG  D  +  L  M
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895

Query: 431 ESTRFRPTVISYNIIILGFCKTR 453
           E+ R+ P+   Y I+     K R
Sbjct: 896 ETRRYMPSFHIYTILAREASKKR 918



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 35/325 (10%)

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           K  + +   F+  L   G +  + +Y+ LL  L  +G           M+S G++PN++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I++LC+DG   DA  +++   E  ++PD ++Y  +I  +C+   LD A++  + M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEI------------------------------ 356
            +GC P+ V Y+T++   C +G  ++A ++                              
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 357 -----FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                F  + + GC PNV +Y  + S L  SG    A+G+   M   G+ P+ +TYN+LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + L  +  +  A  +L  M      P +++YN +I G+C      +++ V+  M ++G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
            N  TY  +I+G    G    A+ +
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRI 482



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +T   +D+L    + GL    ++Y  L+    + G     ++    M+S+G  P+++ Y
Sbjct: 162 ARTMSFLDML---SQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A CK+GN   A  I +K+ +    P+  +Y +M        D   AL + ++M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G EP+ +TY++LI+ LC  G V+EA  L+ +M      PT  +    I+  C      +
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +  +   M  KGC+PN  TY  LI G+   G    A+ L       H +SRD
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL------FHRMSRD 384


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 227/458 (49%), Gaps = 26/458 (5%)

Query: 49  RAGKFD-----ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY-G 102
           + GKFD       +Y    M+ +G +P ++    +I    ++ +  +A  +M  + +Y  
Sbjct: 176 QLGKFDMVDLARDMYI--KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+ F Y +LI G C+ + ++LA  + DR+   G  P+ VTY+ +I  LCS G +E A  
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + +++++   +PTV TYTI +                  + +C  G   +A + +  ++ 
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPL------------------VSLCDAGCSSEAVELLGKMKK 335

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RGC P++ ++  L+  L   GK+E    L  +M++ GL P  VTY+ LI+ LC +G+ E 
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET 395

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  + +     G  P   +Y+ +I  +C  G +  A+   D M+  G  P+++ YNT++ 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK GN + A+ + E +   G  P+  +Y  + S     G    A  +   M+  GI P
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TY ++I        VD+A+ L   M  +   P+  +YN++I GF KT  I+E+    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             M ++G  PN  TY   I+G+   G    A ++ + +
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 227/482 (47%), Gaps = 26/482 (5%)

Query: 28  THLLSFDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           +H+  +D     F    LI    R    D +    + MV +GC P+ V  + LI     E
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 86  RKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +  +A+ ++E +++K  EP V+ Y   +   C A     A ++L +++ RG  P++ T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             +I  L   G  E A  ++ ++L D   PT +TY  LI                    +
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ------------------L 387

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C +G    AF   + + S G  P   +YN +++    MG  ++   +  +M+  G  PNV
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+ LI   C+ G   +A+ +L   K  GL PDA++Y  LIS + + G+L+ A      
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  P+ V Y  I+  +      D AL +F K+ + G  P+  +YN M S    +  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A     +M+ +G+ P+ ITY S I  LCR+G    A  +  +ME   + P + +Y+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 445 IILGFCKTRRIN--ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I G C+  R    E   +LA +   GC+PN  TY  L++G+   G   EA +L   +VS
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQL---VVS 684

Query: 503 MH 504
           M 
Sbjct: 685 MQ 686



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 196/398 (49%), Gaps = 18/398 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N +I+  CK  +++ A  ++  +      P+  TY  +I   C    ++ AF +
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           FD++++D C P  +TY+ LI     EG+ ++AM +L+EM                    +
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM------------------VQK 301

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P V +Y + L +L + G   E  +L+ +M  RG  PN+ T++ LIS L RDGK E A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +       GL P   +Y+ LI+  C +GR + A     +M+S G LP    YN I+  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G+  +A+ IF+K+   G  PNV +YNT+       G+   A+ ++  M   G++PD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY  LIS   R G ++ A  L   M      P  ++Y  II G+    ++++++ +  
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            M E G  P+  TY ++I G       +EA      +V
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV 579



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 243/556 (43%), Gaps = 56/556 (10%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI      G+ +E++  +E MV  G +P V   T  +        S++AV 
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           ++  ++K G  P++  + ALISG  +  + E+A  +  ++ + G  P  VTYN +I  LC
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G  E+AF +F  +L     P+  TY  +I+   L G   KAM + D+M          
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK+G +  A + +  ++  G +PD  +Y  L+      GK E    L   M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +  G+ PN VTY+ +I       K +DA+ +     E G  P + +Y+ +IS + K   +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE----------------- 358
             A  F   M+  G LP+++ Y + +   C+NG    A +IF                  
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628

Query: 359 --------------------KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
                               +L+  GC PNV +Y T+   L   G    A  ++  M  K
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P E  Y +L+   C++  V+ A+ +   M++  F+  +  Y  +I   CK   I E+
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH-AISRDTFKRLNRT 517
             +   M EK    +E  + +L++G+   G     ++L + + S +  ++  T+  L R 
Sbjct: 749 QCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARE 808

Query: 518 FPLLDVYKEISHLATK 533
              LD   +I  ++ +
Sbjct: 809 LSALDCAIKIPQISQQ 824


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 17/426 (3%)

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R   +L +  +P++  YNA+I+  CK   +  A  ++ ++     SPD  TY  MI   C
Sbjct: 202 RYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC 261

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
            +  ++SA +VF+Q+ ++ C+P  +TY+ LI      G+ ++A  L+ EM          
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C  G    A++    ++++GC+P+V +Y  L+  L   G  +    L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN VTY+ LI+ L  + + + A  VL      G +P+  +Y+ +I  YC  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+  ++ M+  G   ++V YNTI+  +C +GN   AL I + + D GC P+  SY  +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                       A G+ +EM+  G+ P+E+TY +LI   C+D  +D A  LL  M+ +  
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           RP V +YN++I G  K    + + E+   M E+G  PN  TY  +I+G+   G  + A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 496 LANALV 501
           + N ++
Sbjct: 622 MFNKMI 627



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 217/446 (48%), Gaps = 19/446 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     +G+ +E+   I  M+ +G  P    CT  I           A R+   ++
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V+ Y ALISG C +  +++A  +  R+   G  P+ VTYN +I  L     I+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF V + + R+ C P ++TY  +I+   + G   KAM +++ M                
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM---------------- 451

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               RG   ++++YN +++   + G      +++  M   G +P+  +Y+ LI   C+  
Sbjct: 452 --LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E A  +     + GL P+  +Y  LI  YCKD +LD A   L++M   GC P++  YN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K  N   A E+ + + + G  PNV +Y  M   L  +G    AL M ++M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+ +TY+SLI  L ++G V+EA  L  ++E     P  I+Y  +I  +  + ++  +
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
              L  M + GC+P   TY +LI+G+
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 220/476 (46%), Gaps = 42/476 (8%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQ 121
           M  NGC P++V   ++IK +       KA+ VM  +L++    ++  YN +I G+C +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A ++LD +R  G  PD  +Y  +I   C    +ESAF +F++++ D   P  +TYT 
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI     + + D A  LL+ M                 G+ K+     A +  + +   G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+V++Y  ++  L   G      ++  +MI +G  PN++TYS LI +L ++GK E+A 
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI---- 340
           ++    +  GL PD  +Y  +I AY   G+++ A  FL  MI  GC P +  Y  +    
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715

Query: 341 ----------LAAF------CKNG----NADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
                     LAA       C  G    + D    +  KL+++    +V   N + S L 
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           ++G    A  ++  M+S+G+ PD+  YNSL+  L R   VD A+G+   M +      + 
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            Y  +I   C+  R  E+      M  +   P++    +LI+G+   G++   ME 
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 195/443 (44%), Gaps = 45/443 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  + +LI    +  K + +      MV +G  P+ V  T LI  + ++ K + A  ++E
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++ G  P+V  YN LI G  K N    A ++   +   G  P+VVTY  MI  LC  G
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 614

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A ++F++++   C P ++TY+ LI+A   EG+ ++A  L  E              
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE-------------- 660

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL- 274
               LE  G  PD I+Y  ++   +  GK E     +  MI  G +P + TY +LI  L 
Sbjct: 661 ----LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 275 -------------------CRDG---KTEDAVDVLRAAKEKGLTP--DAYSYDPLISAYC 310
                              C  G     +DAV V+ +AK   L P       + L+S   
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM-SAKLAELDPGLSVQVQNALVSNLS 775

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR   A E L  MIS G  PD   YN++L +  +  N D A+ +F+ +S  GC  +++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            Y  +  AL     +  A      ML +   PD++    LI  L RDG  D  +  L  M
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895

Query: 431 ESTRFRPTVISYNIIILGFCKTR 453
           E+ R+ P+   Y I+     K R
Sbjct: 896 ETRRYMPSFHIYTILAREASKKR 918



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 35/325 (10%)

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           K  + +   F+  L   G +  + +Y+ LL  L  +G           M+S G++PN++ 
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I++LC+DG   DA  +++   E  ++PD ++Y  +I  +C+   LD A++  + M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEI------------------------------ 356
            +GC P+ V Y+T++   C +G  ++A ++                              
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 357 -----FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                F  + + GC PNV +Y  + S L  SG    A+G+   M   G+ P+ +TYN+LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + L  +  +  A  +L  M      P +++YN +I G+C      +++ V+  M ++G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
            N  TY  +I+G    G    A+ +
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRI 482



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +T   +D+L    + GL    ++Y  L+    + G     ++    M+S+G  P+++ Y
Sbjct: 162 ARTMSFLDML---SQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A CK+GN   A  I +K+ +    P+  +Y +M        D   AL + ++M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G EP+ +TY++LI+ LC  G V+EA  L+ +M      PT  +    I+  C      +
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +  +   M  KGC+PN  TY  LI G+   G    A+ L       H +SRD
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL------FHRMSRD 384


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 248/487 (50%), Gaps = 25/487 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--I 97
           +  L+    +AGKFDE+   +  M+A GC PD V  + LI    +     +A RV+E  I
Sbjct: 81  YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 140

Query: 98  LEKYGEPDVFAYNALISGFC-KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
               G  D  A+  +I   C K N +ELA+KVL  + ++GF+P V+ +N++I   C    
Sbjct: 141 QRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 199

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++SA+K+ + ++   C P V T+TILI       +  +A +LL++M              
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK+G V  A++  + +E R C P+V+++N+L+  L    + EE  +L   M   G
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDAYSYDPLISAYCKDGRLDLA 318
             P+++TY+ LI  LC+  + ++A  + +   E G++  +A +Y  L   Y   GR+  A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 ++  G  PD+  Y +++  +CK   A + +E+ E+++  G PP V++ + +   
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL---VDMESTRF 435
           L+      RA+ +   M ++G   D + YN ++  + R    ++A+ +L   +D    +F
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P+  + + ++   C+  R +++ ++L  M E+G     ++Y  L+ G+       EA +
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559

Query: 496 LANALVS 502
           +  A+VS
Sbjct: 560 VFEAMVS 566



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 237/478 (49%), Gaps = 19/478 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    AG  D ++  +E M +NG + + V+ T L+K      +  +A+     + K  
Sbjct: 15  LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 74

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  Y AL+   CKA + + A  +L  + +RG +PD VT++ +I  LC  G  E AF+
Sbjct: 75  APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFR 134

Query: 163 VFDQLLRDNCKPTVITYTILIQ-----------------ATMLEGQTDKAMKL-LDEMGM 204
           V + +++     +   +  +IQ                   + +G T   +   L   G 
Sbjct: 135 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 194

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   +  A++ +  +  +GC P+V ++ +L+  L    +  E ++L+ +M++ G  PNV
Sbjct: 195 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNV 254

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTYS +I+ LC+ G+ +DA ++ +  + +   P+  +++ LI   CK  R++ A +    
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 314

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC-PPNVSSYNTMFSALWSSG 383
           M   GC PDI+ YN+++   CK+   D+A ++F+ + + G    N  +Y+T+F    + G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  + S ++ KG  PD  TY SLI   C+     E V L+ +M S  F P V + +
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ G  +      +I++  +M  +GC  +   Y L++EG+       +A+ +   ++
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 201/397 (50%), Gaps = 20/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y  LI GF  A  +++A ++L+ ++S GF  + V +  ++  LC  G +  A + 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  + +D C P V+TYT L+ A    G+ D+A  +L EM                 G+CK
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN-MGKWEEGEKLMTEMISRGLEPNVV 265
            G   QAF+ +  +  RG      ++  +++ L N     E   K++  +I++G  P V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            ++++I+  C+    + A  +L    EKG  P+ +++  LI+  CK  R+  A + L+ M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           ++ GC P++V Y+T++   CK G  D A E+F+ +    CPPNV ++N +   L  +   
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNI 444
             A  +   M   G  PD ITYNSLI  LC+   VDEA  L   + ES       ++Y+ 
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +  G+    R+ ++  + + + +KG  P+  TY  LI
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 220/439 (50%), Gaps = 23/439 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFCKANQ 121
           ++A G  P V+M   +I  F + +  + A +++E++ EK   P+VF +  LI+G CKAN+
Sbjct: 175 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR 234

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A ++L+++ + G SP+VVTY+ +I  LC +G ++ A+++F  + R NC P V+T+ I
Sbjct: 235 VGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNI 294

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI                   G+CK   + +A Q    +   GC PD+I+YN L+  L  
Sbjct: 295 LID------------------GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336

Query: 242 MGKWEEGEKLMTEMISRGLE-PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             + +E  +L   +   G+   N VTYS L       G+  DA  +     +KG +PD  
Sbjct: 337 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 396

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI  YCK  R    +E ++ M S G  P +   + +L    +  + ++A+++F+ +
Sbjct: 397 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 456

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK---GIEPDEITYNSLISCLCRD 417
           +  GC  +   YN +   +  +    +AL ++ +++ K      P     ++L+  LC+ 
Sbjct: 457 AARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 516

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D+A  LL  M    F   V SYN ++ G  + +R +E+ +V  AM   G  P  +T 
Sbjct: 517 GRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 576

Query: 478 VLLIEGIGYGGWRAEAMEL 496
            ++I  +       +A EL
Sbjct: 577 NVVISWLCSAAKVDDAYEL 595



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 186/343 (54%), Gaps = 19/343 (5%)

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           C P   TY ILI+     G  D A++LL+EM                 G+C  G V +A 
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +  R++ ++ C PDV++Y  L+  L   GK++E + ++ EMI+RG  P+ VT+S LI  L
Sbjct: 65  EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC-KDGRLDLAIEFLDYMISDGCLPD 333
           C+ G  E A  VL    ++G+     +++ +I   C K   ++LA + L  +I+ G  P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           ++ +N ++  FCK  + D A ++ E + + GC PNV ++  + + L  +     A  ++ 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M++ G  P+ +TY+++I+ LC+ G VD+A  L   ME     P V+++NI+I G CK +
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           RI E+ ++   M E GC P+  TY  LI+G+       EA +L
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 201/431 (46%), Gaps = 58/431 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +A +  E+   +E MV  GC P+VV  + +I    ++ + + A  + +++E
Sbjct: 222 FTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 281

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    P+V  +N LI G CKA +IE A ++  R+R  G +PD++TYN +I  LC    ++
Sbjct: 282 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 341

Query: 159 SAFKVFDQL-------------------------LRDNCK-----------PTVITYTIL 182
            AF++F  +                         + D C+           P + TYT L
Sbjct: 342 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I       +  + ++L++EM                 G+ +     +A Q   S+ +RGC
Sbjct: 402 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 461

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS---RGLEPNVVTYSILISSLCRDGKTED 282
             D + YN+++  +    K  +   ++ ++I    R   P+      L+ SLC+ G+T+D
Sbjct: 462 TDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD 521

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +L    E+G      SY+ L+S   +  R D A +  + M+S G  P+I   N +++
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C     D A E+ +++S +GC P++ + NT+      SG    A  ++ EM   G+EP
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641

Query: 403 DEITYNSLISC 413
           ++ T++ L+ C
Sbjct: 642 NDTTHD-LLEC 651



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 2/276 (0%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           +R C P+  +Y +L+R   + G  +   +L+ EM S G E N V ++ L+  LC  G+  
Sbjct: 2   ARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVV 61

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A++  RA   K   PD  +Y  L+ A CK G+ D A   L  MI+ GC PD V ++T++
Sbjct: 62  EALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGI 400
              CK G+ +QA  + E +   G   + +++ T+   L +  + +  A  ++  +++KG 
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P  + +N +I+  C+   +D A  LL  M      P V ++ I+I G CK  R+ E+ +
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +L  M   GC PN  TY  +I G+   G   +A EL
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL 276



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    + +  L+    R  ++DE+    E+MV+ G  P++     +I       K + A 
Sbjct: 534 FAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAY 593

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
            +++ + K G  PD+   N LI G+CK+ + +LA K+L+ +   G  P+  T++++
Sbjct: 594 ELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 223/442 (50%), Gaps = 29/442 (6%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F   I+   + G  D ++  ++ M   GC PDVV+ + LI  F ++   ++A+ ++
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +    +P+   YNA + G C A + E   +++  +  +G SP+  T++++I SLC   
Sbjct: 284 NTM--LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNN 341

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           +++SA +V +Q+ +  C+P  + Y I+I +    G+ D A++LL+ M             
Sbjct: 342 LVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV------------ 389

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                    C+PD + +N +L+      +W +  +L+ +M         +T++ILI +LC
Sbjct: 390 ---------CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLC 440

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G    A  V         TPD  +Y  L++ + + G +++AI+    M    C PDI 
Sbjct: 441 QNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIF 497

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN +L   C+    + A E+  ++    CPPN  ++N + ++L   G   RA+ ++ +M
Sbjct: 498 SYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            + G  PD  TYN+LI+     G +D+A+ LL  M     +P  ISYN  + G C+  R 
Sbjct: 558 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLKGLCRAERW 614

Query: 456 NESIEVLAAMFEKGCKPNETTY 477
            ++ E++A M    C PNE T+
Sbjct: 615 QDAEELVAEMLRNKCTPNEVTF 636



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 30/454 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    R G+  ++   + +  A G   +VV  T LI  + +  + + A+R++  +    
Sbjct: 130 LVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPV-- 186

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD + YN ++ G C A + E A +++  +      P+ VT+   I S C  G+++ A +
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + DQ+ R  C P V+ Y+ LI     +G  D+A+ LL+ M                    
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML------------------- 287

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C+P+ + YN  L+ L    +WE+  +LM EM+ +G  PN  T+S+LISSLC++   + 
Sbjct: 288 --CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDS 345

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           AV+VL   ++ G  PD  +Y+ +I++  + GR+D A+  L+ M+   C PD + +N +L 
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLK 402

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FC+      A E+  ++    CP    ++N +   L  +G    A  +  +M      P
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTP 462

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TY+SL++     G+V+ A+ L   M     +P + SYN ++ G C+  R  ++ E++
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMPC---KPDIFSYNAVLKGLCRAARWEDAGELI 519

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           A M  K C PNE T+ +LI  +   G    A+E+
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 254/497 (51%), Gaps = 44/497 (8%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C + + ++ +R+ +S    P+T+          +  ++K    A K++E+   +  M+ N
Sbjct: 169 CRSGRLDDALRLIASMPVAPDTY---------TYNTVLKGLCIAKKWEEAEELMAEMIRN 219

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            C P+ V     I+ F Q    ++AV++++ + +YG  PDV  Y+ LI+GF +   ++ A
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQA 279

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              LD L +    P+ V YN  +  LC     E   ++  +++R  C P   T+++LI +
Sbjct: 280 ---LDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             +C+  +V  A + +  +E  GC+PD ++YN+++ +L   G+ 
Sbjct: 337 ------------------LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRV 378

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++  +L+  M+ +   P+ + ++ ++   CR  +  DA +++             +++ L
Sbjct: 379 DDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNIL 435

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I   C++G ++ A +  + M    C PDIV Y+++L  F + G  + A+++F  +    C
Sbjct: 436 IDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---C 492

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P++ SYN +   L  +     A  +I+EM+ K   P+E+T+N LI+ LC+ G+VD A+ 
Sbjct: 493 KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIE 552

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +L  M +    P + +YN +I GF +  R+++++++L+ M    CKP+  +Y   ++G+ 
Sbjct: 553 VLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLC 609

Query: 486 YGGWRAEAMELANALVS 502
               RAE  + A  LV+
Sbjct: 610 ----RAERWQDAEELVA 622


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 249/518 (48%), Gaps = 66/518 (12%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           + V    F +L+K    A + DE+    +  M   GC P+VV    L+K F  E ++ +A
Sbjct: 226 WRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEA 285

Query: 92  VRVMEIL-EKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           + ++ ++ +  G    PDV +YN +I+GF +  Q++ A  +  ++  RG  PDVVTYN +
Sbjct: 286 LELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTV 345

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG---- 203
           I  LC   +++ A  VF Q+L    KP+  TY  LI   +  G+  + ++LL+EM     
Sbjct: 346 IDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDL 405

Query: 204 -------------MCKKG---------------------MVGQAFQFVRSLESRGCQPDV 229
                        +CK G                     M+ +A      +  +G  P+V
Sbjct: 406 EPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNV 465

Query: 230 ISYNMLLRTLLNMG-----------------------KWEEGEKLMTEMISRGLEPNVVT 266
           ++Y  L+  L  +G                       KWE+ E+L+ EM+ +G+  +VV 
Sbjct: 466 VNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVV 525

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ L+  LCR+G+  +A  ++      G+ PD  SY+ L+  +C  GR D A + LD M+
Sbjct: 526 FNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMV 585

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S G  P+   YNT+L  +CK    D A  +  ++   G  P+V +YNT+   L+ +G   
Sbjct: 586 SIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFS 645

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +   M++   + D  TYN +++ LC++  VDEA  +   + S   +  +I++NI+I
Sbjct: 646 EAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMI 705

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               K  +  +++++ A +   G  P+  TY L+ E +
Sbjct: 706 GALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENL 743



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 246/512 (48%), Gaps = 71/512 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYG-EPDV 106
           R G+ +        ++  G + + ++  +L+K     ++ ++A  ++   + ++G  P+V
Sbjct: 207 RMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNV 266

Query: 107 FAYNALISGFCKANQIELANKVLDRLRS-RGFS--PDVVTYNIMIGSLCSRGMIESAFKV 163
            +YN L+ GFC  N+ E A ++L  +   +G S  PDVV+YN +I      G ++ A+ +
Sbjct: 267 VSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNL 326

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F Q++     P V+TY  +I                   G+CK  +V +A    + +  +
Sbjct: 327 FLQMIDRGIPPDVVTYNTVID------------------GLCKAQVVDRAKAVFQQMLDK 368

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK---- 279
           G +P   +YN L+   L+ GKW+E  +L+ EM +  LEP+   Y++L+  LC++G+    
Sbjct: 369 GVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEA 428

Query: 280 -----------------TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI--- 319
                             ++AV +    +++GL+P+  +Y  LI A CK GR+D AI   
Sbjct: 429 RNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKF 488

Query: 320 --------------------EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
                               E +  M+  G   D+V +NT++   C+ G   +A  + E 
Sbjct: 489 NQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL 548

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +  VG  P+V SYNT+      +G    A  ++  M+S G++P+E TYN+L+   C+   
Sbjct: 549 MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +D+A  LL +M      P V++YN I+ G  +T R +E+ E+   M     + +  TY +
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668

Query: 480 LIEGIGYGGWRAEAMELANALVS----MHAIS 507
           ++ G+       EA ++  +L S    +H I+
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIIT 700



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 220/486 (45%), Gaps = 81/486 (16%)

Query: 79  IKKFFQERK------SNKAVRVMEILEKYGEP-DVFAYNALISGFCKAN------QIELA 125
           +++F  +R       S+ A+++ ++L  +  P  V A+N L++   +A+      + +L 
Sbjct: 117 LERFIADRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLG 176

Query: 126 NKVLDRLR---SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
             + DR+    S   +PD  TY+I+IG  C  G +E  F VF  +L+   +   I +  L
Sbjct: 177 ISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQL 236

Query: 183 IQATMLEGQTDKAMK-LLDEM-----------------GMCKKGMVGQAFQFVRSL---E 221
           ++      + D+A   LL  M                 G C +    +A + +  +   +
Sbjct: 237 LKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQ 296

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
              C PDV+SYN ++      G+ ++   L  +MI RG+ P+VVTY+ +I  LC+    +
Sbjct: 297 GLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVD 356

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  V +   +KG+ P   +Y+ LI  Y   G+    +  L+ M +    PD   Y  +L
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416

Query: 342 AAFCKNGNA---------------------DQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
              CKNG                       D+A+ IF+K+   G  PNV +Y  +  AL 
Sbjct: 417 DYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALC 476

Query: 381 SSG---DKI--------------------RALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             G   D I                    +A  ++ EML +GI  D + +N+L+  LCR+
Sbjct: 477 KLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCRE 536

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V EA  L+  M     RP VISYN ++ G C T R +E+ ++L  M   G KPNE TY
Sbjct: 537 GRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTY 596

Query: 478 VLLIEG 483
             L+ G
Sbjct: 597 NTLLHG 602



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 224/523 (42%), Gaps = 66/523 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  +I   FR G+ D++      M+  G  PDVV    +I    + +  ++A  V + +L
Sbjct: 307 YNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQML 366

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG--- 155
           +K  +P    YN LI G+    + +   ++L+ + +    PD   Y +++  LC  G   
Sbjct: 367 DKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCT 426

Query: 156 ------------------MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
                             MI+ A  +FD++ +    P V+ Y  LI A    G+ D A+ 
Sbjct: 427 EARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAIL 486

Query: 198 LLDEM----------------------------------------GMCKKGMVGQAFQFV 217
             ++M                                         +C++G V +A + +
Sbjct: 487 KFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLI 546

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +   G +PDVISYN L+      G+ +E  KL+  M+S GL+PN  TY+ L+   C+ 
Sbjct: 547 ELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKA 606

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +DA  +LR     G TPD  +Y+ ++    + GR   A E    MI+     D+  Y
Sbjct: 607 RRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTY 666

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N IL   CKN   D+A ++F+ L   G   ++ ++N M  AL   G K  A+ + + + +
Sbjct: 667 NIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISA 726

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ PD  TY  +   L ++G ++E   L   ME     P     N ++  F     I+ 
Sbjct: 727 YGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISR 786

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +   L+ + EK      +T  +LI        R E  +LA +L
Sbjct: 787 AGAYLSKLDEKNFSLEASTASMLISLYS----RGEYQQLAKSL 825



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL------GMISEML---SKGI 400
           +  AL++F+ L     P +V+++N + +A+  +  +   L       +   M+   S  +
Sbjct: 132 SHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKV 191

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD  TY+ LI C CR G ++    +   +  T +R   I +N ++ G C  +R++E+  
Sbjct: 192 APDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATN 251

Query: 461 VLA-AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           +L   M E GC PN  +Y  L++G        EA+EL + +     +S
Sbjct: 252 ILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLS 299


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 227/479 (47%), Gaps = 26/479 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+L  +  M A GC P+ V    L+       +  +A  +++ + + G E  V+
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G+C+  QIE A+++ + + SRG  P VVTYN ++  LC  G +  A K+ D +
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +  N  P +++Y  LI                   G  + G +G+AF     L  R   P
Sbjct: 334 VNKNLMPDLVSYNTLIY------------------GYTRLGNIGEAFLLFAELRYRSLAP 375

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V++YN L+  L  +G  +   +L  EMI  G +P+V T++  +   C+ G    A ++ 
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +GL PD ++Y   I    K G    A    + M++ G  PD++ YN  +    K 
Sbjct: 436 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 495

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A E+ +K+   G  P+  +Y ++  A   +G   +A  +  EMLSKGI P  +TY
Sbjct: 496 GNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTY 555

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             LI      G +  A+    +M      P VI+YN +I G CK R+++++    A M  
Sbjct: 556 TVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQA 615

Query: 468 KGCKPNETTYVLLI-EGIGYGGWRAEAMELANALVSMH-----AISRDTFKRLNRTFPL 520
           KG  PN+ TY +LI E    G W+ EA+ L   ++           R   K LN+ + L
Sbjct: 616 KGISPNKYTYTILINENCNLGHWQ-EALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL 673



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 230/474 (48%), Gaps = 30/474 (6%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           VSSS  + P+  L    + +      +K+S      ++ L     MV+ G  PDV  C +
Sbjct: 120 VSSSEVSMPSVKL----ILDLLLWIYVKKSL----LEKCLLVFYKMVSKGLLPDVKNCNR 171

Query: 78  LIKKFFQERKSNKAV--RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRS 134
           +++   ++R +N  V   V  ++ + G  P V  YN ++  FCK   ++ A ++L ++++
Sbjct: 172 VLR-LLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQA 230

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G SP+ VTYN+++  L   G +E A ++   +LR   + +V TY  LI+          
Sbjct: 231 MGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIR---------- 280

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C+KG + +A +    + SRG  P V++YN ++  L   G+  +  KL+  
Sbjct: 281 --------GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDV 332

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+++ L P++V+Y+ LI    R G   +A  +    + + L P   +Y+ LI   C+ G 
Sbjct: 333 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGD 392

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD+A+   D MI  G  PD+  + T +  FCK GN   A E+F+++ + G  P+  +Y T
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYIT 452

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
                   GD  +A GM  EML++G  PD ITYN  I  L + G + EA  L+  M    
Sbjct: 453 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
             P  ++Y  II        + ++  +   M  KG  P+  TY +LI      G
Sbjct: 513 LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRG 566



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 201/400 (50%), Gaps = 24/400 (6%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-GMIESAFKVFDQLLRD 170
           L+  + K + +E    V  ++ S+G  PDV   N ++  L  R   I+ A +V++ ++  
Sbjct: 137 LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVEC 196

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              PTV+TY      TML+               CKKGMV +A Q +  +++ GC P+ +
Sbjct: 197 GICPTVVTYN-----TMLDS-------------FCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN+L+  L + G+ E+ ++L+ +M+  GLE +V TY  LI   C  G+ E+A  +    
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +G  P   +Y+ ++   CK GR+  A + LD M++   +PD+V+YNT++  + + GN 
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A  +F +L      P+V +YNT+   L   GD   A+ +  EM+  G +PD  T+ + 
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +   C+ G +  A  L  +M +   +P   +Y   I+G  K    +++  +   M  +G 
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELA-----NALVSMHA 505
            P+  TY + I+G+   G   EA EL      N LV  H 
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 518



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 190/388 (48%), Gaps = 11/388 (2%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R  GF    ++Y++++  L   G++ SA+ V ++++    +  VI      + +M     
Sbjct: 73  RQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSM----- 127

Query: 193 DKAMKLLDEMGM---CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM-GKWEEG 248
             ++KL+ ++ +    KK ++ +       + S+G  PDV + N +LR L +     +  
Sbjct: 128 -PSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVA 186

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            ++   M+  G+ P VVTY+ ++ S C+ G  ++A+ +L   +  G +P+  +Y+ L++ 
Sbjct: 187 REVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNG 246

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
               G ++ A E +  M+  G    +  Y+ ++  +C+ G  ++A  + E++   G  P 
Sbjct: 247 LSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPT 306

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V +YNT+   L   G    A  ++  M++K + PD ++YN+LI    R G + EA  L  
Sbjct: 307 VVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFA 366

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           ++      P+V++YN +I G C+   ++ ++ +   M + G  P+  T+   + G    G
Sbjct: 367 ELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMG 426

Query: 489 WRAEAMELANALVSMHAISRDTFKRLNR 516
               A EL + +++   +  D F  + R
Sbjct: 427 NLPMAKELFDEMLN-RGLQPDRFAYITR 453


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 229/466 (49%), Gaps = 21/466 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A GC P VV    ++    ++ K++KA+R+ E +++   P++  Y
Sbjct: 214 AGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTY 273

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   CKA  +E A KV D ++  G  P+V T NIMI  LC    ++ A  +F+ +  
Sbjct: 274 NIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDY 333

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GMCKKGMV 210
             C P   T+  LI     +G+ D A ++ + M                     C +   
Sbjct: 334 KVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKED 393

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G   +  + +   GC PD++  N  +  +   G+ E+G  L  E+ +RG  P+  +YSIL
Sbjct: 394 GH--KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSIL 451

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I SL + G   +  ++  A K++G   D  +Y+ +I  +CK G+++ A + L+ M + G 
Sbjct: 452 IHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH 511

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +V Y +++    K    D+A  +FE+    G   N   Y+++       G    A  
Sbjct: 512 HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYL 571

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM+ KG+ P+  T+N L+  L +   ++EA+     M+  +  P  I+Y I+I G C
Sbjct: 572 VMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLC 631

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K R+ N++      M ++G KPN  TY  +I G+   G  A+A  L
Sbjct: 632 KVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSL 677



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 216/467 (46%), Gaps = 20/467 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           + +  LI      G+ D  L     M   G + +V + T LI+ F +E + + A+ ++ E
Sbjct: 62  SAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDE 121

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +     + D+  YN  I  F K  ++++A K    +++ G  PD VTY  M+G LC    
Sbjct: 122 MKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANR 181

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A ++F+Q+ ++   P    Y  +I                  MG    G   +A+  
Sbjct: 182 LDEAVEIFEQMEQNRQVPCAYAYNTMI------------------MGYGSAGKFDEAYSL 223

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +    ++GC P V++YN +L  L   GK ++  ++  EM  R   PN+ TY+I+I  LC+
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCK 282

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G  E A  V  A KE GL P+  + + +I   CK  +LD A    + M    C PD   
Sbjct: 283 AGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGAT 342

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           + +++    K G  D A  I+E++ D    PNV  Y ++    +    K     M  EM+
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  PD +  N+ + C+ + G  ++   L  ++++  F P   SY+I+I    K     
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           E+ E+  AM ++GC  +   Y  +I+G    G   +A +L   + +M
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTM 509



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 174/378 (46%), Gaps = 19/378 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P  +    L++   K+ ++  A  +L  +R   F P    Y  +IG+L   G  +    +
Sbjct: 24  PTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLAL 83

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F+Q+     +  V   T LI+    EG+ D A+ LLDEM                  +S 
Sbjct: 84  FNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM------------------KSN 125

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
               D++ YN+ +     +GK +   K   EM + GL P+ VTY+ ++  LC+  + ++A
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V++    ++    P AY+Y+ +I  Y   G+ D A   L+   + GC+P +V YN IL  
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             K G  D+AL IFE++      PN+ +YN +   L  +G+   A  +   M   G+ P+
Sbjct: 246 LGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             T N +I  LC+   +DEA  +   M+     P   ++  +I G  K  R++++  +  
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364

Query: 464 AMFEKGCKPNETTYVLLI 481
            M +    PN   Y  LI
Sbjct: 365 RMLDADQIPNVVVYTSLI 382



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 1/271 (0%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +AF  ++ +     +P   +Y  L+  L  +G+ +    L  +M   G E NV   + LI
Sbjct: 44  EAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLI 103

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
               R+G+ + A+ +L   K      D   Y+  I  + K G++D+A +F   M ++G +
Sbjct: 104 RVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLV 163

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD V Y +++   CK    D+A+EIFE++      P   +YNTM     S+G    A  +
Sbjct: 164 PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +    +KG  P  + YN +++CL + G  D+A+ +  +M+     P + +YNIII   CK
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCK 282

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
              +  + +V  AM E G  PN  T  ++I+
Sbjct: 283 AGNVEAAFKVRDAMKEAGLFPNVRTINIMID 313



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 19/289 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AG   E+     +M   GC  D      +I  F +  K NKA +++E ++  G
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P V  Y +++ G  K ++++ A  + +  +S G   + V Y+ +I      G ++ A+
Sbjct: 511 HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAY 570

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V +++++    P V T+  L+                   G+ K   + +A    +S++
Sbjct: 571 LVMEEMMQKGLTPNVYTWNCLLD------------------GLVKAEEINEALVCFQSMK 612

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
              C P+ I+Y +L+  L  + K+ +      EM  +GL+PN +TY+ +IS L + G   
Sbjct: 613 DLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVA 672

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
            A  +    +  G  PD+ SY+ +I       R   A +  +     GC
Sbjct: 673 QASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGC 721



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 112/248 (45%)

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           E+++ EM   G  P   T   L++S  +  K  +A D+L+  +     P   +Y  LI A
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
             + G  D  +   + M   G   ++    T++  F + G  D AL + +++       +
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           +  YN         G    A     EM + G+ PD++TY S++  LC+   +DEAV +  
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            ME  R  P   +YN +I+G+    + +E+  +L     KGC P+   Y  ++  +G  G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 489 WRAEAMEL 496
              +A+ +
Sbjct: 251 KTDKALRI 258



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 96/266 (36%), Gaps = 52/266 (19%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           ++ +  +  LI    + G+ DE+   +E M+  G                          
Sbjct: 547 ELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLT------------------------ 582

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
                     P+V+ +N L+ G  KA +I  A      ++    +P+ +TY I+I  LC 
Sbjct: 583 ----------PNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCK 632

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
                 AF  + ++ +   KP  ITYT +I                   G+ K G V QA
Sbjct: 633 VRKFNKAFVFWQEMQKQGLKPNTITYTAMIS------------------GLAKSGNVAQA 674

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   + G  PD  SYN ++  L    +  +  +L  E   +G   +  T   L+ +
Sbjct: 675 SSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDA 734

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDA 299
           L +    E A  V    +E   +  A
Sbjct: 735 LHKAECLEQAAIVGAVLRETAKSQHA 760


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 235/500 (47%), Gaps = 55/500 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    R G   ++   +E+M A G +PD+     L     Q  K ++A ++ + +E
Sbjct: 283 YNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 342

Query: 100 KYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                 PDV  YN L+    K  +   A  +L+ +R +G    +VT+NI++  LC  G +
Sbjct: 343 HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQL 402

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A      +  +   P VITY  LI A        KA  L+DEM               
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK+    +A + +RS   RG  PD +SY  ++       K E    L  EM  R L
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P++ TY+ LI  LC  GK  +A+D L    +KGL PD  +Y+ +I AYCK+G L+ A +
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           F + M+ +   PD+V  NT++   C +G  ++A+++FE  ++ G   +V +YNT+  AL 
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME-----STRF 435
             GD   AL   ++M ++G++PD  TYN ++S L   G  +EA  +L  ++     S RF
Sbjct: 643 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERF 702

Query: 436 RPTVI-------------------------------SYNIIILGFCKTRRINESIEVLAA 464
              +I                               SYN  +   C   ++ E+  VL  
Sbjct: 703 SYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDE 762

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M +KG   + +TY+ L+EG+
Sbjct: 763 MMQKGMSVDSSTYITLMEGL 782



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 238/480 (49%), Gaps = 19/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+      G   ++L  + +M   G  PDVV    L+K   ++    +A  ++  ++
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P    YN L+S + +   I+ A  V++ + + GF PD+ TYN++   LC  G ++
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 159 SAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
            AFK+ D++   +   P V+TY  L+ A     ++  A+ LL+EM               
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C++G + +A   ++ +   G  PDVI+YN L+          +   LM EM+  GL
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           + +  T + L+ +LC++ + E+A ++LR+  ++G  PD  SY  +++AY K+ + + A+ 
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             D M      P I  YNT++   C  G   +A++   +L   G  P+ ++YN +  A  
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             GD  +A    ++ML    +PD +T N+L++ LC  G +++A+ L         +  VI
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN +I   CK   ++ ++   A M  +G +P+  TY +++  +   G   EA  + + L
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 202/400 (50%), Gaps = 19/400 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+ + +N L+   C    +  A   L  ++  G SPDVVTYN ++ + C +GM+  A  
Sbjct: 207 HPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEART 266

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +  ++ ++   PT  TY  L+ A                    + G + QA   V ++ +
Sbjct: 267 LLARMKKEGIAPTRATYNTLVSA------------------YARLGWIKQATNVVEAMTA 308

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSILISSLCRDGKTE 281
            G +PD+ +YN+L   L   GK +E  KL  EM    +  P+VVTY+ L+ +  +  ++ 
Sbjct: 309 FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSS 368

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA+++L   ++KG+     +++ ++   C++G+L+ A+  L  M  +G  PD++ YNT++
Sbjct: 369 DALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLI 428

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            A+CK  N  +A  + +++   G   +  + NT+   L        A  ++     +G  
Sbjct: 429 DAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PDE++Y ++++   ++   + A+ L  +M   +  P++ +YN +I G C   ++ E+I+ 
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK 548

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           L  + +KG  P++TTY ++I      G   +A +  N ++
Sbjct: 549 LNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 182/411 (44%), Gaps = 55/411 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   R G+ +E+L  ++ M   G  PDV+    LI  + + R   KA  +M+ + + G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + D F  N L+   CK  + E A ++L     RGF PD V+Y  ++ +       E A 
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            ++D++ +    P++ TY  LI+                  G+C  G + +A   +  L 
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIK------------------GLCTIGKLTEAIDKLNELM 553

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PD  +YN+++      G  E+  +   +M+    +P+VVT + L++ LC  GK E
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLE 613

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+ +  +  EKG   D  +Y+ LI A CKDG +D A+ F   M + G  PD   YN +L
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673

Query: 342 AAFCKNGNADQALEIFEKLSD---------------------VGCPPNVSS--------- 371
           +A  + G +++A  +  KL +                      G  P V S         
Sbjct: 674 SALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAK 733

Query: 372 ------YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
                 YN     L   G    A  ++ EM+ KG+  D  TY +L+  L +
Sbjct: 734 GGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +T +  +I    + G  +++  F   M+ N  KPDVV C  L+       K  KA+++ E
Sbjct: 561 DTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE 620

Query: 97  ILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
              + G+  DV  YN LI   CK   ++ A      + +RG  PD  TYN+++ +L   G
Sbjct: 621 SWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 680

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             E A  +  +L          +Y  LI+++  E +T K  ++  +   C+ G  G A  
Sbjct: 681 RSEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEVKSD---CESG--GNA-- 732

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                  +G   D  SYN  ++ L   G+ +E + ++ EM+ +G+  +  TY  L+  L 
Sbjct: 733 -------KGG--DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLI 783

Query: 276 RDGKTE 281
           +  K +
Sbjct: 784 KRQKRQ 789


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 223/434 (51%), Gaps = 22/434 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            D+++ +  S+  N C+P +   T L+    +  K  +A  V E + + G +PD+ AY++
Sbjct: 179 LDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSS 238

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI G  KA +++ A K++D + +RG  P  V Y  ++  LC  G I+ A K   ++ R  
Sbjct: 239 LIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 298

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V TY+ ++   +  G+ +KA  +++EM                    R C PD IS
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMA------------------DRDCAPDTIS 340

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y M +  L ++G+ EE EK+   M+ +G +P++ TY I+I + C++G    A  VLR   
Sbjct: 341 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD 400

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           +  + P+ Y Y  ++  + K  RL+ A+E    ++ DG LP  V YNT++ A CK    D
Sbjct: 401 KAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 460

Query: 352 QALEIFEKLS--DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
           +ALE+  ++        P++ +Y+ +   L   G + RA  +++EM+  G+ PD  TY S
Sbjct: 461 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 520

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  L   G V  A+ LL +M      P   +Y  ++   C++  ++ + ++L  M   G
Sbjct: 521 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNG 579

Query: 470 CKPNETTYVLLIEG 483
             PNE T+  + +G
Sbjct: 580 HTPNEFTFKAVEKG 593



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 205/413 (49%), Gaps = 19/413 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP+V ++N L+ GF   +  E+ N +L  ++SRG + +  T+ +++ +LC+R  ++ A  
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVS 184

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
            F+ +  + C+PT+ TYT+L+       + ++A  + +EM                 G+ 
Sbjct: 185 YFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLS 244

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G V +A + V  + +RG  P  ++Y  ++  L   G+ +E  K + EM  R L P V 
Sbjct: 245 KAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 304

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TYS +++     GK E A  V+    ++   PD  SY   I A    GR + A +  + M
Sbjct: 305 TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 364

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  GC PD+  Y  I+  FCK G+   A  +   +      PN   Y  +      S   
Sbjct: 365 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 424

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR--FRPTVISYN 443
             AL +   +L  GI P  +TYN++I+ LC+   +DEA+ LL +M+  +    P++++Y+
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 484

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +II G  K      + ++LA M + G  P+  TY  LI+ +   G  + AMEL
Sbjct: 485 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 537



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 201/404 (49%), Gaps = 22/404 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A K + +    E M+  G KPD++  + LI    +  + ++A ++++++   G  P   
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY ++++G CK  +I+ A K +  +R R   P V TY+ ++      G +E AF V +++
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM 329

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              +C P  I+YT+ I+A    G+ ++A K+ + M                    +GC+P
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM------------------VEKGCKP 371

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+ +Y +++      G       ++  M    ++PN   Y++++    +  + E+A+++ 
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI--SDGCLPDIVNYNTILAAFC 345
           +   + G+ P   +Y+ +I+A CK  ++D A+E L  M    +   P IV Y+ I+    
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K G  ++A ++  ++ D G  P+  +Y ++   L  +G   RA+ ++ EML  GI PD+ 
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 551

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           TY +L+  LCR   VD A  LL +M      P   ++  +  GF
Sbjct: 552 TYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 185/374 (49%), Gaps = 22/374 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEIL 98
           +  LI    +AG+ DE+   ++ MVA G  P  V  T ++    +  +  +AV+ + E+ 
Sbjct: 236 YSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 295

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P V  Y+ +++G+    ++E A  V++ +  R  +PD ++Y + I +L S G  E
Sbjct: 296 RRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 355

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KVF+ ++   CKP + TY I+I                     CK+G +  A   +R
Sbjct: 356 EAEKVFETMVEKGCKPDMHTYGIIID------------------NFCKEGSMAAATHVLR 397

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++    +P+   Y M++   +   + EE  +L   ++  G+ P+ VTY+ +I++LC+  
Sbjct: 398 LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLK 457

Query: 279 KTEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           K ++A+++LR  + +   L P   +Y  +I    K G  + A + L  MI +G +PD   
Sbjct: 458 KMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFT 517

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y +++      G   +A+E+ E++   G  P+  +Y T+   L  S D   A  ++ EM+
Sbjct: 518 YTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMM 576

Query: 397 SKGIEPDEITYNSL 410
             G  P+E T+ ++
Sbjct: 577 RNGHTPNEFTFKAV 590



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 176/378 (46%), Gaps = 20/378 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GFS  + T N ++ +L   G +  A   F   + +   P V ++ IL++        +  
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVV 147

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
             LL EM                  +C +  + +A  +  S+    C+P + +Y +L+  
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    K E    +  EMI +G +P+++ YS LI  L + G+ ++A  ++     +G  P 
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           A +Y  +++  CK GR+  A++ +  M      P +  Y+ I+  +   G  ++A  + E
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVME 327

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +++D  C P+  SY     AL+S G +  A  +   M+ KG +PD  TY  +I   C++G
Sbjct: 328 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +  A  +L  M+    +P    Y +I+ GF K+ R+ E++E+   + + G  P+  TY 
Sbjct: 388 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 447

Query: 479 LLIEGIGYGGWRAEAMEL 496
            +I  +       EA+EL
Sbjct: 448 TVINALCKLKKMDEALEL 465


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 227/434 (52%), Gaps = 29/434 (6%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNAL 112
           F  S Y+   + A  CKP +V   K      Q R ++      E++ +  +P+VF +N +
Sbjct: 176 FKRSGYYGYKLSAMSCKPLMVALLK------QNRSADVEYLYKEMIRRKIQPNVFTFNVV 229

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---SRGMIESAFKVFDQLLR 169
           I+  CK  ++  A  V++ ++  G+SP+VV+YN +I   C     G +  A  V  +++ 
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           +   P + T+ ILI     +     ++K+  EM                    +   P+V
Sbjct: 290 NEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEM------------------LDQDVIPNV 331

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           I+YN L+  L N GK  E   +  +M+S G++PN++TY  LI+  C++G  ++A+D+  +
Sbjct: 332 ITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDS 391

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K +G  P    Y+ LI AYCK G++D      + M  +G +PD+  YN ++A  C+NGN
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + A ++F++L++ G  P++ +++ +     S G+  +A  ++ EM   G++P  +TYN 
Sbjct: 452 IEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 410 LISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++   C++G +  A  +   ME   R R  V SYN+++ G+ +  ++ ++  +L  M EK
Sbjct: 511 MMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 469 GCKPNETTYVLLIE 482
           G  PN  TY ++ E
Sbjct: 571 GLVPNRITYEIVKE 584



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 193/400 (48%), Gaps = 30/400 (7%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGF 116
           Y  + M+    +P+V     +I    +  K NKA  VME ++ YG  P+V +YN LI G+
Sbjct: 209 YLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGY 268

Query: 117 CK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           CK     ++  A+ VL  +     SP++ T+NI+I        +  + KVF ++L  +  
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVI 328

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P VITY  LI      G+ ++A+ + D+M                 G CK GM+ +A   
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDM 388

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
             S++ +G +P    YNML+     +GK ++G  L  EM   G+ P+V TY+ LI+ LCR
Sbjct: 389 FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  E A  +      KGL PD  ++  L+  YC  G    A   L  M   G  P  + 
Sbjct: 449 NGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 337 YNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           YN ++  +CK GN   A  +  ++  +     NV+SYN +       G    A  +++EM
Sbjct: 508 YNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
           L KG+ P+ ITY      + ++ MVD+  G + D+E   F
Sbjct: 568 LEKGLVPNRITYE-----IVKEEMVDK--GFVPDIEGHLF 600



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 185/375 (49%), Gaps = 22/375 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  +   ++ EL  +   R    G+    ++   ++ +L  +        ++ +++R  
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V T+ ++I A                  +CK G + +A   +  ++  G  P+V+S
Sbjct: 219 IQPNVFTFNVVINA------------------LCKTGKMNKARDVMEDMKVYGYSPNVVS 260

Query: 232 YNMLLRTLLNMG---KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           YN L+     +G   K  + + ++ EM+   + PN+ T++ILI    +D     ++ V +
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFK 320

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              ++ + P+  +Y+ LI+  C  G+++ AI   D M+S G  P+++ Y++++  FCKNG
Sbjct: 321 EMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNG 380

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +AL++F+ +   G  P    YN +  A    G       +  EM  +GI PD  TYN
Sbjct: 381 MMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+ LCR+G + EA   L D  + +  P +++++I++ G+C      ++  +L  M + 
Sbjct: 441 CLIAGLCRNGNI-EAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKM 499

Query: 469 GCKPNETTYVLLIEG 483
           G KP   TY ++++G
Sbjct: 500 GLKPRHLTYNIMMKG 514



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 160/286 (55%), Gaps = 10/286 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L +  C+P       L+  LL   +  + E L  EMI R ++PNV T++++I++LC+ GK
Sbjct: 186 LSAMSCKP-------LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGK 238

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK---DGRLDLAIEFLDYMISDGCLPDIVN 336
              A DV+   K  G +P+  SY+ LI  YCK   +G++  A   L  M+ +   P++  
Sbjct: 239 MNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTT 298

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++  F K+ N   +L++F+++ D    PNV +YN++ + L + G    A+GM  +M+
Sbjct: 299 FNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMV 358

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G++P+ ITY+SLI+  C++GM+ EA+ +   ++    RPT   YN++I  +CK  +I+
Sbjct: 359 SAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKID 418

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   +   M  +G  P+  TY  LI G+   G    A +L + L +
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN 464



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 174/343 (50%), Gaps = 22/343 (6%)

Query: 162 KVFDQLLRDNCKPTVIT--YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF--QFV 217
           ++F QL+     P +    YT L++   +    +   KLL  +   K+    ++F   FV
Sbjct: 69  ELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFV 128

Query: 218 R--------------SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           R              S+    C   +I+ +ML+    N  ++E G +        G + +
Sbjct: 129 RNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            ++   L+ +L +  ++ D   + +    + + P+ ++++ +I+A CK G+++ A + ++
Sbjct: 188 AMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247

Query: 324 YMISDGCLPDIVNYNTILAAFCK---NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            M   G  P++V+YNT++  +CK   NG   +A  + +++ +    PN++++N +    W
Sbjct: 248 DMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFW 307

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
              +   +L +  EML + + P+ ITYNSLI+ LC  G ++EA+G+   M S   +P +I
Sbjct: 308 KDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLI 367

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +Y+ +I GFCK   + E++++  ++  +G +P    Y +LI+ 
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 20/252 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            GK +E++   + MV+ G +P+++    LI  F +     +A+ + + ++  G  P    
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LI  +CK  +I+    + + +   G  PDV TYN +I  LC  G IE+A K+FDQL 
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                P ++T+ IL++     G++ KA  LL EM                 G CK+G + 
Sbjct: 464 NKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLK 522

Query: 212 QAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            A      +E  R  + +V SYN+LL+     GK E+   L+ EM+ +GL PN +TY I+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582

Query: 271 ISSLCRDGKTED 282
              +   G   D
Sbjct: 583 KEEMVDKGFVPD 594



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 15/210 (7%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           TRP T + +          LI    + GK D+     E M   G  PDV     LI    
Sbjct: 397 TRPTTRMYNM---------LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 84  QERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           +      A ++ + L   G PD+  ++ L+ G+C   +   A  +L  +   G  P  +T
Sbjct: 448 RNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           YNIM+   C  G +++A  +  Q+ ++   +  V +Y +L+Q    +G+ + A  LL+E 
Sbjct: 508 YNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE- 566

Query: 203 GMCKKGMVGQ--AFQFVR-SLESRGCQPDV 229
            M +KG+V     ++ V+  +  +G  PD+
Sbjct: 567 -MLEKGLVPNRITYEIVKEEMVDKGFVPDI 595


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 225/444 (50%), Gaps = 18/444 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G+  ++   +  M + G  P+      L+  + +     +A  V+E++ +    PDV+
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+G C   +IE A K+ D + +    PDVV+YN +I        I  AFK+ +++
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                KP  +T+ I+++    EG+ D A   + +M                 G CK G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+AF+ +  +  +  + D ++ N +LRTL    K EE  KL++    RG   + V+Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I    +DG  + A+ +    KEK + P   +Y+ +I   C+ G+ + AI  L+ ++  G 
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LPD   YNTIL  +C+ G+ ++A +   K+ +    P+V + N +   L   G   +AL 
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +  +SKG   D +TYN+LI+ LC++G +D+A  LL +ME     P   +YN II    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 451 KTRRINESIEVLAAMFEKGCKPNE 474
            + RI E+ E ++ M EKG  P++
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQ 698



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 20/450 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P+V     +I  +  E K   AV  + ++ KY   PD   YN ++   CK  ++  A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L  ++SRG  P+  TYNI++   C  G ++ A  V + + ++N  P V TY +LI  
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN- 321

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+C +G + +AF+    +E+    PDV+SYN L+   L   K 
Sbjct: 322 -----------------GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E  KL+ EM  +G++PN VT++I++   C++GK +DA + +   +E G +PD  +Y+ L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I+ YCK G +  A   +D M       D V  NTIL   C+    ++A ++       G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  SY T+    +  G+  RAL +  EM  K I P  +TYN +I  LC+ G  ++A+ 
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L ++  +   P   +YN I+ G+C+   + ++ +    M E   KP+  T  +L+ G+ 
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 486 YGGWRAEAMELANALVSM-HAISRDTFKRL 514
             G   +A++L N  VS   AI   T+  L
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 218/489 (44%), Gaps = 65/489 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G   E+   IE M  N   PDV     LI     E +  +A ++ + +E     PDV 
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI+G  + ++I  A K+L+ +  +G  P+ VT+NIM+   C  G ++ A     ++
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
                 P  +TY  LI      G   +A + +DEMG                 +C++  +
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A++ + S   RG   D +SY  L+      G  +   KL  EM  + + P+ VTY+ +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ GKTE A+  L    E GL PD  +Y+ ++  YC++G ++ A +F + M+ +  
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589

Query: 331 LPDI-----------------------------------VNYNTILAAFCKNGNADQALE 355
            PD+                                   V YNT++ + CK G  D A  
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  ++ +    P+  +YN + +AL  SG    A   +S+ML KG  PD++          
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL--------- 700

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
               +D+   ++    S     + ++Y+  I   C   +  +++ +     +KG   +++
Sbjct: 701 ---QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 476 TYVLLIEGI 484
           TY+ L++G+
Sbjct: 758 TYINLMDGL 766



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 190/386 (49%), Gaps = 20/386 (5%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT-- 192
           R  SP     +  IG+    G    AF++F ++ R   +P ++T   L+ + +    +  
Sbjct: 129 RLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS 188

Query: 193 --------DKAMKL----------LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
                   + A+KL          +   G C +     A +F+  +    C PD ++YN 
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +L TL   G+  +   L+ +M SRGL PN  TY+IL+   C+ G  ++A +V+    +  
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L PD ++Y+ LI+  C +GR++ A +  D M +   LPD+V+YNT++    +     +A 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++ E++S+ G  PN  ++N M       G    A   I++M   G  PD +TYN+LI+  
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G + EA   + +M     +   ++ N I+   C+ +++ E+ ++L++  ++G   +E
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            +Y  LI G    G    A++L + +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEM 514



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 8/331 (2%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE---GEKLMTEMISRGLEP 262
           + G    AFQ  + ++    +P++++ N LL +L+            +   + I  G+ P
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVP 206

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV T++I+I   C + K +DAV+ L    +   +PD  +Y+ ++   CK GRL  A + L
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLL 266

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M S G LP+   YN ++  +CK G   +A  + E ++     P+V +YN + + L + 
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +  EM +  + PD ++YN+LI+       + EA  LL +M     +P  +++
Sbjct: 327 GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTH 386

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM----ELAN 498
           NI++  +CK  +++++   +  M E G  P+  TY  LI G    G   EA     E+  
Sbjct: 387 NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR 446

Query: 499 ALVSMHAISRDTFKR-LNRTFPLLDVYKEIS 528
             + M +++ +T  R L R   L + YK +S
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R  K +E+   + S    G   D V    LI  +F++   ++A+++  E+ EK   P   
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I G C+  + E A   L+ L   G  PD  TYN ++   C  G +E AF+  +++
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + ++ KP V T  IL++   +EG  +KA+KL +                    +CK+G +
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN------- 263
             AF  +  +E +   PD  +YN ++  L + G+  E E+ M++M+ +G  P+       
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDK 704

Query: 264 ----------------VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
                            V YS  I  LC +GK +DA+ +   +K+KG+T D  +Y  L+ 
Sbjct: 705 NETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764

Query: 308 AYCK 311
              K
Sbjct: 765 GLIK 768



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 47/315 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C   K  E  ++ SSA  R       + + E  +  LI   F+ G  D +L   + M   
Sbjct: 464 CREKKLEEAYKLLSSARKR------GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELA 125
              P  V    +I    Q  K+ +A+ ++ E+LE    PD   YN ++ G+C+   +E A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +  +++    F PDV T NI++  LC  G++E A K+F+  +        +TY  LI +
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ D A  LL EM                  +   G + +A +F+  +  +G  PD
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697

Query: 229 -----------------------VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                                   ++Y+  ++ L   GK+++  ++  E   +G+  +  
Sbjct: 698 QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 266 TYSILISSLCRDGKT 280
           TY  L+  L +  K+
Sbjct: 758 TYINLMDGLIKRRKS 772



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 43/237 (18%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+     D R DL +  L        L D     T + A+ ++G    A +IF+K+  + 
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLD-----TAIGAYVQSGQPHHAFQIFKKMKRLR 165

Query: 365 CPPNVSSYNTMFSALW-------------SSGDKIR------------------------ 387
             PN+ + NT+ ++L              +  D I+                        
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 388 -ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+  ++ M      PD +TYN+++  LC+ G + +A  LL+DM+S    P   +YNI++
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            G+CK   + E+  V+  M +    P+  TY +LI G+   G   EA +L + + ++
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 236/462 (51%), Gaps = 19/462 (4%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
               + + ++      KFD++      M+ +   P +V  T+++    +  K +  + + 
Sbjct: 43  HHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY 102

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
             +E  G   D++++  LI  FC+ +++ LA  +L ++   GF P +VT   ++   C  
Sbjct: 103 HKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG 162

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A  + D +      P V+ Y  +I                   G+CK   +  A 
Sbjct: 163 NRFQEAVSLVDSMDGFGFVPNVVIYNTVIN------------------GLCKNRDLNNAL 204

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    +E +G + D ++YN L+  L N G+W +  +L+ +M+ R ++PNV+ ++ LI + 
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            ++G   +A ++ +    + + P+ ++Y+ LI+ +C  G L  A    D M+S GC PD+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YNT++  FCK+   +  +++F +++  G   +  +YNT+      +G    A  + + 
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+  G+ PD +TYN L+ CLC +G +++A+ ++ D++ +     +I+YNIII G C+T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + E+  +  ++  KG KP+   Y+ +I G+   G + EA +L
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 208/439 (47%), Gaps = 19/439 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +++    +  KFD  +Y    M   G   D+   T LI  F +  + + A+ ++  + 
Sbjct: 82  FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P +    +L++GFC+ N+ + A  ++D +   GF P+VV YN +I  LC    + 
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A +VF  + +   +   +TY  LI                   G+   G    A + +R
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLIS------------------GLSNSGRWTDAARLLR 243

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  R   P+VI +  L+ T +  G   E   L  EMI R + PNV TY+ LI+  C  G
Sbjct: 244 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA  +      KG  PD  +Y+ LI+ +CK  R++  ++    M   G + D   YN
Sbjct: 304 CLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  +C+ G  + A ++F ++ D G  P++ +YN +   L ++G   +AL M+ ++   
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            ++ D ITYN +I  LCR   + EA  L   +     +P  I+Y  +I G C+     E+
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483

Query: 459 IEVLAAMFEKGCKPNETTY 477
            ++   M E G  P+E  Y
Sbjct: 484 DKLCRRMKEDGFMPSERIY 502



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 18/364 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M+  G +P +V    L+  F Q  +  +AV +++ ++ +G  P+V  YN +I+G CK   
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A +V   +  +G   D VTYN +I  L + G    A ++   +++    P VI +T 
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI   + EG   +A  L  EM                 G C  G +G A      + S+G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PDV++YN L+       + E+G KL  EM  +GL  +  TY+ LI   C+ GK   A 
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            V     + G++PD  +Y+ L+   C +G+++ A+  ++ +       DI+ YN I+   
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+     +A  +F  L+  G  P+  +Y TM S L   G +  A  +   M   G  P E
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 405 ITYN 408
             Y+
Sbjct: 500 RIYD 503



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 157/345 (45%), Gaps = 18/345 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            + AF +F ++L+    P+++ +T ++       + D  + L  +M              
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-------------- 105

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               E+ G   D+ S+ +L+       +      L+ +M+  G  P++VT   L++  C+
Sbjct: 106 ----ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ 161

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + ++AV ++ +    G  P+   Y+ +I+  CK+  L+ A+E    M   G   D V 
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT+++    +G    A  +   +      PNV  +  +       G+ + A  +  EM+
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            + + P+  TYNSLI+  C  G + +A  +   M S    P V++YN +I GFCK++R+ 
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           + +++   M  +G   +  TY  LI G    G    A ++ N +V
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 131/272 (48%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            Y   LR  L+  K+++   L  EM+     P++V ++ +++ + +  K +  + +    
Sbjct: 46  HYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM 105

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G++ D YS+  LI  +C+  RL LA+  L  M+  G  P IV   ++L  FC+    
Sbjct: 106 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF 165

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A+ + + +   G  PNV  YNT+ + L  + D   AL +   M  KGI  D +TYN+L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           IS L   G   +A  LL DM   +  P VI +  +I  F K   + E+  +   M  +  
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            PN  TY  LI G    G   +A  + + +VS
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G   ++ Y  + MV+ GC PDVV    LI  F + ++    +++  E+  +    D F Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI G+C+A ++ +A KV +R+   G SPD+VTYNI++  LC+ G IE A  + + L +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                 +ITY I+IQ      +  +A  L   +                 G+C+KG+  +
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLR 237
           A +  R ++  G  P    Y+  LR
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETLR 507


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 234/484 (48%), Gaps = 26/484 (5%)

Query: 40  FMKLIKRSFRAGK-FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +  +I    R G+  D + +  + M+  G  PDVV    +I    + R  +KA  V+  +
Sbjct: 205 YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRM 264

Query: 99  EKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G  P+   +N+L+ G+C + +   A  V  R+   G  PDV TYN ++G LC  G  
Sbjct: 265 VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS 324

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A K+FD +++   KP   TY  L+     EG   K   LLD M              V
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM--------------V 370

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R+    G QPD   +N+L+ T    GK ++   L ++M  +GL P+ VTY I++ +LC  
Sbjct: 371 RN----GIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMV 426

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK +DA+        +GLTPDA  +  LI   C   + D A E    MI  G  P+ + +
Sbjct: 427 GKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFF 486

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT+L   CK G   +A  IF+ +  V    +V +YNT+       G    A  ++  M+ 
Sbjct: 487 NTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVL 546

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++P+E+TYN++I+  C++G +++A  L   M S    P +++Y+ I+ G  + RR   
Sbjct: 547 DGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAA 606

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           + E+   M + G K +  TY +++ G+       +A+ +   L  +       F   NRT
Sbjct: 607 AKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLI------DFHLENRT 660

Query: 518 FPLL 521
           F ++
Sbjct: 661 FNIM 664



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 228/472 (48%), Gaps = 20/472 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           LS DV    +  +I    +A   D++   +  MV NG  P+ +    L+  +    K N 
Sbjct: 234 LSPDV--VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPND 291

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ V + + + G EPDVF YN L+   CK  +   A K+ D +  RG  P+  TY  ++ 
Sbjct: 292 AIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLH 351

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
              + G +     + D ++R+  +P    + ILI      G+ D AM L  +M       
Sbjct: 352 GYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNP 411

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +C  G V  A      L S G  PD + +  L+  L    KW++ E+L 
Sbjct: 412 DTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELA 471

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EMI RG+ PN + ++ L++ LC++G    A ++        +  D  +Y+ LI  YC  
Sbjct: 472 VEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLH 531

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G++D A + L+ M+ DG  P+ V YNT++  +CKNG  + A  +F +++  G  P + +Y
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTY 591

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +T+   L+ +     A  +   M+  GI+ D  TYN ++  LC++   D+A+ +  ++  
Sbjct: 592 STILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYL 651

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             F     ++NI+I    K  R +E+ ++ A++  +G  PN  TY L+++ +
Sbjct: 652 IDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 703



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 224/481 (46%), Gaps = 29/481 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA----VRVMEILEKYGEP 104
           R G  D +   +  ++ +G   + +  + L+K    ++++++A    +R M +L     P
Sbjct: 103 RVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLG--CTP 160

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL-----RSRGFSPDVVTYNIMIGSLCSRG-MIE 158
           +VF+Y  L+ G C  N+ + A  +L  +        G+ PDVV+YN +I  L   G  ++
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A+ +FDQ+L     P V+TY  +I A       DKA  +L  M                
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C  G    A    + +   G +PDV +YN L+  L   G+  E  K+   M+ RG +
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  TY  L+     +G       +L      G+ PD Y ++ LI  Y K G++D A+  
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M   G  PD V Y  ++ A C  G  D A+  F +L   G  P+   +  +   L +
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                +A  +  EM+ +GI P+ I +N+L++ LC++GMV  A  +   M     +  VI+
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN +I G+C   +++E+ ++L  M   G KPNE TY  +I G    G   +A  L   + 
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA 580

Query: 502 S 502
           S
Sbjct: 581 S 581



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 220/454 (48%), Gaps = 24/454 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE------PDVFAYNALISGFCK-A 119
           GC P+V   T L+K    E +S +A+ ++  +    +      PDV +YN +I+G  +  
Sbjct: 157 GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREG 216

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            Q++ A  + D++  +G SPDVVTYN +I +L     ++ A  V  +++++   P  IT+
Sbjct: 217 RQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITH 276

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
             L+      G+ + A+ +   M                  +CK G   +A +   S+  
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RG +P+  +Y  LL      G   +   L+  M+  G++P+   ++ILI +  + GK +D
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +    + +GL PD  +Y  ++ A C  G++D A+     +IS+G  PD V +  ++ 
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH 456

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C     D+A E+  ++   G  PN   +NT+ + L   G   RA  +   M+   ++ 
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITYN+LI   C  G VDEA  LL  M     +P  ++YN +I G+CK  RI ++  + 
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M  KG  P   TY  +++G+      A A EL
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 193/384 (50%), Gaps = 17/384 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P++  Y+ +I    +   ++LA   L R+   G++ + +T++ ++ +LC +     A  +
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 164 -FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
              ++    C P V +YTIL++    E ++ +A+ LL  M      MV          ++
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTM------MVAD--------DT 194

Query: 223 RGC-QPDVISYNMLLRTLLNMGK-WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           RG   PDV+SYN ++  LL  G+  +    L  +M+ +GL P+VVTY+ +IS+L +    
Sbjct: 195 RGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAM 254

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  VL    + G  P+  +++ L+  YC  G+ + AI     M  DG  PD+  YNT+
Sbjct: 255 DKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTL 314

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CKNG + +A +IF+ +   G  PN ++Y T+     + G  ++   ++  M+  GI
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +PD   +N LI    + G VD+A+ L   M      P  ++Y I++   C   ++++++ 
Sbjct: 375 QPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
               +  +G  P+   +  LI G+
Sbjct: 435 QFGRLISEGLTPDAVVFRNLIHGL 458



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 187/388 (48%), Gaps = 18/388 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +SMV  G KP+      L+  +  E    K   +++++ + G +PD +
Sbjct: 320 KNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHY 379

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  + K  +++ A  +  ++R +G +PD VTY I++ +LC  G ++ A   F +L
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P  + +  LI       + DKA +L  EM                  +CK+GMV
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A      +     Q DVI+YN L+      GK +E  KL+  M+  G++PN VTY+ +
Sbjct: 500 ARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTM 559

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C++G+ EDA  + R    KG+ P   +Y  ++    +  R   A E   +MI  G 
Sbjct: 560 INGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGI 619

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN IL   C+N   D AL IF+ L  +       ++N M  AL   G    A  
Sbjct: 620 KFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKD 679

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDG 418
           + + +L++G+ P+ +TY  ++  L   G
Sbjct: 680 LFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 192/418 (45%), Gaps = 23/418 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK D+++     M   G  PD V    ++       K + A+     L 
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD   +  LI G C  ++ + A ++   +  RG  P+ + +N ++  LC  GM+ 
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD ++R + +  VITY  LI    L G+ D+A KLL+ M                
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G +  AF   R + S+G  P +++Y+ +L+ L    +    ++L   MI  G++
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            ++ TY+I++  LC++  T+DA+ + +         +  +++ +I A  K GR D A + 
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              +++ G +P++V Y  ++ +  + G  ++  ++F  L   GC  N    N +   L  
Sbjct: 681 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQ 740

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            G+  +A   +S++       +  T  SL+  L   G  D+ +  + +    ++RP V
Sbjct: 741 KGEVRKAGVYLSKIDENNFSLEASTAESLV-LLVSSGKYDQHINAIPE----KYRPVV 793



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 133/255 (52%), Gaps = 8/255 (3%)

Query: 255 MISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           M++R  + PN++TYS++I    R G  + A   L      G T +A ++ PL+ A C   
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKK 140

Query: 314 RLDLAIEF-LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPP 367
           R   A++  L  M   GC P++ +Y  +L   C    + QAL +   +     +  G PP
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPP 200

Query: 368 NVSSYNTMFSALWSSGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           +V SYNT+ + L   G ++  A  +  +ML +G+ PD +TYNS+IS L +   +D+A  +
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           LV M      P  I++N ++ G+C + + N++I V   M   G +P+  TY  L+  +  
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320

Query: 487 GGWRAEAMELANALV 501
            G   EA ++ +++V
Sbjct: 321 NGRSMEARKIFDSMV 335



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 10/176 (5%)

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG---CPPNVSSYNT 374
           A    D ++       IV+ N  L+   ++  A  A+ +F ++  V     PPN+ +Y+ 
Sbjct: 38  AHHAFDELLHRPTTSSIVDLNRALSDAARHSPA-VAISLFRRMVMVARPKVPPNLITYSV 96

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL-LVDMEST 433
           +       G    A   +  ++  G   + IT++ L+  LC      EA+ + L  M   
Sbjct: 97  VIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVL 156

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMF-----EKGCKPNETTYVLLIEGI 484
              P V SY I++ G C   R  +++ +L  M        G  P+  +Y  +I G+
Sbjct: 157 GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N +L+ F ++   F  +I    + G+ DE+     S++A G  P+VV    ++K   ++ 
Sbjct: 648 NLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
              +   +   LEK G   +    NAL+    +  ++  A   L ++    FS +  T
Sbjct: 708 LLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEAST 765


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 232/438 (52%), Gaps = 6/438 (1%)

Query: 51  GKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           GK  ++   ++ M    C+ P+ V    ++  + ++ +   A+R+++ +EK G E D++ 
Sbjct: 244 GKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYT 301

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I   CK  +   A  +L R+R    +PD  +YN +I      G I  A  +F+Q+L
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--CKKGMVGQAFQFVRSLESRGCQ 226
           R + KP+V TYT LI      G+TD+A ++L EM +   +   V +A Q ++ + + G  
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGID 421

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDVI+Y+ L+  +  MG   E +++++ M   G+ PN V Y+ L+   C+ G  ++A+  
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  GL  ++  ++ L+ ++ ++G +  A +F  YM       D+ ++N I+ ++C+
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 541

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN  +A  +++ +   G PP++ +Y ++   L   G  ++A   +  +L K    DE T
Sbjct: 542 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 601

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            N+L+  +C+ G +DEA+ L   M +    P   +Y I++ GFCK  +I  ++ +L  M 
Sbjct: 602 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMML 661

Query: 467 EKGCKPNETTYVLLIEGI 484
           EKG  P+   Y  L+ G+
Sbjct: 662 EKGLVPDTIAYTCLLNGL 679



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 219/453 (48%), Gaps = 22/453 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +SFDV    F  +I    + G   E+    ++MV +G  PD+     L++   Q     +
Sbjct: 525 ISFDV--ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 582

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A   M  +LEK    D    N L+ G CK   ++ A  + +++ +R   PD  TY I++ 
Sbjct: 583 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 642

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             C RG I  A  +   +L     P  I YT L+   + EGQ   A  +  E+ +CK+G+
Sbjct: 643 GFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI-ICKEGL 701

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                             D I+YN ++   L  G+  E E+LM  M    + P+  +Y+I
Sbjct: 702 YA----------------DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 745

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI--S 327
           L+    + G+    + + R   ++G+ PD  +Y  LI   C+ G +++A++FL+ M+   
Sbjct: 746 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEE 805

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P   +Y  ++ A C+ G+ D A E+ E +  +G  P+  + +++   L   G    
Sbjct: 806 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ + S ++  G+ P   T+ +L+  LC++  +D+A  L   MES   +  V++YN++I 
Sbjct: 866 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 925

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           G C  + I +++++   M  KG  PN TTY+ L
Sbjct: 926 GLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 215/473 (45%), Gaps = 42/473 (8%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + +E K   A   +  +++ G +  +F+ N +++     N+ E     L     R 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKA 195
           F  DV T NI++ SLC++G +  A  +  ++   NC+ P  +TY  ++   + +G+   A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +++LD+M                  +CK     +A+  ++ +      PD  SYN L+  
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL----------- 287
               GK      +  +M+ + L+P+V TY+ LI   CR+G+T++A  VL           
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 288 RAAKEK---------GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +K K         G+ PD  +Y  LI+  CK G +    E L  M   G LP+ V Y 
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 463

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FCK G+A +AL+ F  +   G   N   +N +  + +  G    A      M   
Sbjct: 464 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 523

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I  D  ++N +I   C+ G V EA  +  +M    + P + +Y  ++ G C+   + ++
Sbjct: 524 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 583

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            E +  + EK C  +E T   L+ GI   G   EA++L   +V+ + I  DT+
Sbjct: 584 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN-ILPDTY 635



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 213/457 (46%), Gaps = 21/457 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG   E+L +   +  +G   + V+   L+  F++E    +A +  + + +     DV 
Sbjct: 471 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 530

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           ++N +I  +C+   +  A  V D +   G+ PD+ TY  ++  LC  G +  A +    L
Sbjct: 531 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 590

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C     T   L+      G  D+A+ L ++M                 G CK+G +
Sbjct: 591 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI 650

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTYSI 269
             A   ++ +  +G  PD I+Y  LL  L+N G+ +    +  E+I + GL  + + Y+ 
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++   + G+  +   ++R   E  + P + SY+ L+  Y K G+L   +     M+ +G
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 770

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEK--LSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             PD V Y  ++   C+ G  + A++  EK  L + G  P  + Y  + +A    GD   
Sbjct: 771 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDG 830

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  +  +M + G+ P E+  +S++  LC+ G V+EA+ +   +      PT+ ++  ++ 
Sbjct: 831 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 890

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G CK  +I+++  +   M   G K +  TY +LI G+
Sbjct: 891 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 927



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 173/375 (46%), Gaps = 21/375 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYGEPDVF 107
           + G  DE+L   E MV     PD    T L+  F +  K   A+ ++++ LEK   PD  
Sbjct: 611 KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTI 670

Query: 108 AYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           AY  L++G     Q++ A+ +   +  + G   D + YN M+      G I    ++   
Sbjct: 671 AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 730

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +  +   P+  +Y IL+   + +GQ  + + L  +M                 G+C+ G+
Sbjct: 731 MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 790

Query: 210 VGQAFQFVRS--LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           +  A +F+    LE  G QP    Y  L+     +G  +   +L  +M + G+ P+ V  
Sbjct: 791 IEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAE 850

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S ++  LC+ GK E+A+ V  +    G+ P   ++  L+   CK+ ++D A      M S
Sbjct: 851 SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 910

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G   D+V YN ++   C       AL+++E++   G  PN+++Y T+  A++++G    
Sbjct: 911 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 970

Query: 388 ALGMISEMLSKGIEP 402
              ++ ++  +GI P
Sbjct: 971 GEKLLKDIEDRGIVP 985



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 166/360 (46%), Gaps = 42/360 (11%)

Query: 159 SAFKVFDQLLR--DNCKPT-VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           S   +F  LLR    C PT + +  +L+ A + EG+   A   +  M  C          
Sbjct: 140 SCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDEC---------- 189

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                   G +  + S N +L  L+ + K E     + E + R    +V T +I+++SLC
Sbjct: 190 --------GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLC 241

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             GK   A  +L+  K   L P+A +Y+ +++ Y K GR   A+  LD M  +G   D+ 
Sbjct: 242 TQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLY 300

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++   CK   + +A  + +++ +V   P+  SYNT+    +  G    A+ + ++M
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT----------------- 438
           L + ++P   TY +LI   CR+G  DEA  +L +M+ T  RP                  
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGI 420

Query: 439 ---VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              VI+Y+ +I G CK   I+E+ E+L+ M + G  PN   Y  L+      G   EA++
Sbjct: 421 DPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 480



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 120/285 (42%), Gaps = 19/285 (6%)

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M  QA   +R L   G     I ++ LLRT                 ISR    N+ +  
Sbjct: 123 MPSQAMSVLRHLALTGFSCSAI-FSSLLRT-----------------ISRCDPTNLFSVD 164

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L+++  ++GK  DA   +    E G     +S + +++A     + +    FL   +  
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
               D+   N +L + C  G   +A  + +K+ +   P N  +YNT+ +     G    A
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSA 283

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++ +M   GIE D  TYN +I  LC+      A  LL  M      P   SYN +I G
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           F    +IN +I +   M  +  KP+  TY  LI+G    G   EA
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEA 388


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 231/468 (49%), Gaps = 18/468 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYN 110
           KF +++ F+  M    C PD V    ++    ++ +   A  ++  ++  G  P+   YN
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+ G+CK   ++ A  V++ +      PDV TYN++I  LC+ G IE AFK+ D++   
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQA 213
              P V++Y  LI   +   +  +A KLL+EM                   CK+G +  A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              +  +E  G  PD ++YN L+      G   E  + M EM  + ++ + VT + ++ +
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LCR+ K E+A  +L +A+++G   D  SY  LI  Y KDG +D A++  D M     +P 
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V YN I+   C+ G  +QA+    +L + G  P+ ++YNT+       GD  +A    +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+    +PD  T N L+  LC +GM+++A+ L     S       ++YN +I   CK  
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           R++++  +L+ M EK   P+  TY  +I  +   G   EA E  + ++
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 224/444 (50%), Gaps = 18/444 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G+  ++   +  M + G  P+      L+  + +     +A  V+E++ +    PDV+
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+G C   +IE A K+ D + +    PDVV+YN +I        I  AFK+ +++
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                KP  +T+ I+++    EG+ D A   + +M                 G CK G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+AF+ +  +  +  + D ++ N +LRTL    K EE  KL++    RG   + V+Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I    +DG  + A+ +    KEK + P   +Y+ +I   C+ G+ + AI  L+ ++  G 
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LPD   YNTIL  +C+ G+ ++A +   K+ +    P+V + N +   L   G   +AL 
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +  +SKG   D +TYN+LI+ LC++G +D+A  LL +ME     P   +YN II    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 451 KTRRINESIEVLAAMFEKGCKPNE 474
            + RI E+ E ++ M EKG  P +
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQ 698



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 20/450 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P+V     +I  +  E K   AV  + ++ KY   PD   YN ++   CK  ++  A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L  ++SRG  P+  TYNI++   C  G ++ A  V + + ++N  P V TY +LI  
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN- 321

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+C +G + +AF+    +E+    PDV+SYN L+   L   K 
Sbjct: 322 -----------------GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E  KL+ EM  +G++PN VT++I++   C++GK +DA + +   +E G +PD  +Y+ L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I+ YCK G +  A   +D M       D V  NTIL   C+    ++A ++       G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  SY T+    +  G+  RAL +  EM  K I P  +TYN +I  LC+ G  ++A+ 
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L ++  +   P   +YN I+ G+C+   + ++ +    M E   KP+  T  +L+ G+ 
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 486 YGGWRAEAMELANALVSM-HAISRDTFKRL 514
             G   +A++L N  VS   AI   T+  L
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 216/489 (44%), Gaps = 65/489 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G   E+   IE M  N   PDV     LI     E +  +A ++ + +E     PDV 
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI+G  + ++I  A K+L+ +  +G  P+ VT+NIM+   C  G ++ A     ++
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
                 P  +TY  LI      G   +A + +DEMG                 +C++  +
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A++ + S   RG   D +SY  L+      G  +   KL  EM  + + P+ VTY+ +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ GKTE A+  L    E GL PD  +Y+ ++  YC++G ++ A +F + M+ +  
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589

Query: 331 LPDI-----------------------------------VNYNTILAAFCKNGNADQALE 355
            PD+                                   V YNT++ + CK G  D A  
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  ++ +    P+  +YN + +AL  SG    A   +S+ML KG  P ++          
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL--------- 700

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
               +D    ++    S     + ++Y+  I   C   +  +++ +     +KG   +++
Sbjct: 701 ---QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 476 TYVLLIEGI 484
           TY+ L++G+
Sbjct: 758 TYINLMDGL 766



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 20/386 (5%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT-- 192
           R  SP     +  IG+    G    AF++F ++ R   +P ++T   L+ + +    +  
Sbjct: 129 RLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS 188

Query: 193 --------DKAMKL----------LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
                   + A+KL          +   G C +     A +F+  +    C PD ++YN 
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +L  L   G+  +   L+ +M SRGL PN  TY+IL+   C+ G  ++A +V+    +  
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L PD ++Y+ LI+  C +GR++ A +  D M +   LPD+V+YNT++    +     +A 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++ E++S+ G  PN  ++N M       G    A   I++M   G  PD +TYN+LI+  
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G + EA   + +M     +   ++ N I+   C+ +++ E+ ++L++  ++G   +E
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            +Y  LI G    G    A++L + +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEM 514



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 8/331 (2%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE---GEKLMTEMISRGLEP 262
           + G    AFQ  + ++    +P++++ N LL +L+            +   + I  G+ P
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVP 206

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV T++I+I   C + K +DAV+ L    +   +PD  +Y+ ++ A CK GRL  A + L
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLL 266

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M S G LP+   YN ++  +CK G   +A  + E ++     P+V +YN + + L + 
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +  EM +  + PD ++YN+LI+       + EA  LL +M     +P  +++
Sbjct: 327 GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTH 386

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM----ELAN 498
           NI++  +CK  +++++   +  M E G  P+  TY  LI G    G   EA     E+  
Sbjct: 387 NIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR 446

Query: 499 ALVSMHAISRDTFKR-LNRTFPLLDVYKEIS 528
             + M +++ +T  R L R   L + YK +S
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 41/304 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R  K +E+   + S    G   D V    LI  +F++   ++A+++  E+ EK   P   
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I G C+  + E A   L+ L   G  PD  TYN ++   C  G +E AF+  +++
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + ++ KP V T  IL++   +EG  +KA+KL +                    +CK+G +
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN------- 263
             AF  +  +E +   PD  +YN ++  L + G+  E E+ M++M+ +G  P        
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDX 704

Query: 264 ----------------VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
                            V YS  I  LC +GK +DA+ +   +K+KG+T D  +Y  L+ 
Sbjct: 705 NETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764

Query: 308 AYCK 311
              K
Sbjct: 765 GLIK 768



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 47/315 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C   K  E  ++ SSA  R       + + E  +  LI   F+ G  D +L   + M   
Sbjct: 464 CREKKLEEAYKLLSSARKR------GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELA 125
              P  V    +I    Q  K+ +A+ ++ E+LE    PD   YN ++ G+C+   +E A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +  +++    F PDV T NI++  LC  GM+E A K+F+  +        +TY  LI +
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ D A  LL EM                  +   G + +A +F+  +  +G  P 
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697

Query: 229 -----------------------VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                                   ++Y+  ++ L   GK+++  ++  E   +G+  +  
Sbjct: 698 QVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 266 TYSILISSLCRDGKT 280
           TY  L+  L +  K+
Sbjct: 758 TYINLMDGLIKRRKS 772



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 43/237 (18%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+     D R DL +  L        L D     T + A+ ++G    A +IF+K+  + 
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLD-----TAIGAYVQSGQPHHAFQIFKKMKRLR 165

Query: 365 CPPNVSSYNTMFSALW-------------SSGDKIR------------------------ 387
             PN+ + NT+ ++L              +  D I+                        
Sbjct: 166 LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 388 -ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+  ++ M      PD +TYN+++  LC+ G + +A  LL+DM+S    P   +YNI++
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            G+CK   + E+  V+  M +    P+  TY +LI G+   G   EA +L + + ++
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 224/439 (51%), Gaps = 19/439 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L+    + G+ D +L   +     G +   + C  ++    +E +      V  E++ + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              +V  ++ +I+G CK  + + A  V++ +++ GFSP V+TYN +I   C  G +  A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  +++     P  IT+ ILI                   G C+   V  A +    ++
Sbjct: 285 ALLKEMVAKRIHPNEITFNILID------------------GFCRDENVTAAKKVFEEMQ 326

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G QP+V++YN L+  L + GK +E   L  +M   GL+PNVVTY+ LI+  C+    +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A ++L    ++GL P+  +++ LI AY K GR+D A      M+  G  P++  YN ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC+ GN  +A ++ +++   G   ++ +YN +  AL   G+  +A+ ++ EM   G+ 
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P  +TYN+LI    R+G    A+ +   ME    R  +++YN++I GFC   ++ E+  +
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566

Query: 462 LAAMFEKGCKPNETTYVLL 480
           L  M EKG  PN TTY +L
Sbjct: 567 LNEMLEKGLIPNRTTYDIL 585



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 223/469 (47%), Gaps = 28/469 (5%)

Query: 23  ETRPNTHLLSFDVKETQ------FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ET P++ L      E Q      + K  ++ F A    E    +  ++AN    + +   
Sbjct: 70  ETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA- 128

Query: 77  KLIKKFFQE-RKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
            L+  F +    SN  +   + +L  +G  +    + L+  + K  +++LA +  DR   
Sbjct: 129 -LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            GF    ++ N M+ SL   G I     V+ +++R      V+T+ ++I           
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN---------- 237

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK G   +A   V  +++ G  P VI+YN ++      GK  + + L+ E
Sbjct: 238 --------GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+++ + PN +T++ILI   CRD     A  V    + +GL P+  +Y+ LI+  C +G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A+   D M   G  P++V YN ++  FCK     +A E+ + +   G  PNV ++NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +  A   +G    A  + S ML  G+ P+  TYN LI   CR+G V EA  L  +ME   
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +  +++YNI++   CK     +++ +L  MFE G  P+  TY  LI+G
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 207/418 (49%), Gaps = 33/418 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   ++++FDV       +I    + GKF ++   +E M A G  P V+    +I  + +
Sbjct: 224 RIGVNVVTFDV-------VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             K  KA  ++ E++ K   P+   +N LI GFC+   +  A KV + ++ +G  P+VVT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN +I  LCS G ++ A  + D++     KP V+TY  LI                   G
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN------------------G 378

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CKK M+ +A + +  +  RG  P+VI++N L+      G+ ++   L + M+  G+ PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V TY+ LI   CR+G  ++A  + +  +  GL  D  +Y+ L+ A CK G    A+  LD
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G  P  + YN ++  + + GN+  AL +   +   G   N+ +YN +     + G
Sbjct: 499 EMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKG 558

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
               A  +++EML KG+ P+  TY+ L     RD M+++  G + D++   +  ++ S
Sbjct: 559 KLEEANRLLNEMLEKGLIPNRTTYDIL-----RDEMMEK--GFIPDIDGHLYNVSISS 609


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 240/472 (50%), Gaps = 33/472 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELAN 126
           G  PD V    ++ +    R +  A+ + + + + G  +   Y  LI   CKA  ++ A 
Sbjct: 41  GLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAM 100

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +L  ++SRG +P  + +N++IG LC  G +  A  V+ Q+  D   P  +TYT L+   
Sbjct: 101 GLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVH-- 157

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+ K G +  A Q ++ + S    PD  +  +++++L    + +
Sbjct: 158 ----------------GLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVD 201

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA-AKEKGLTPDAYSYDPL 305
           +  +L+ EM+ RG+  N +TYS L+  LC+  + ++AV +L      +G TPD  +Y  +
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I   CK GRL  A++  + M    C P  + YN+++  +C+ G+ D+A+ +  K+ D  C
Sbjct: 262 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNC 318

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V +Y T+ SA    G    A  +  +M++  + PD +T+ SL+  LC +G +++A+ 
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           LL ++      PT+ +YN ++ G+CK+ ++ ++ E++A    +G  PN  TY +L+ G  
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438

Query: 486 YGGWRAEAMELANAL----------VSMHAISRDTFKRLNRTFPLLDVYKEI 527
             G   +A++  + L          V+M+AI  D   R  RT   +  Y+E+
Sbjct: 439 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 221/486 (45%), Gaps = 23/486 (4%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V  T +  LI    +A   DE++  +  M + G  P  ++   +I    +  +   A+ V
Sbjct: 78  VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGV 137

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
              +     PD   Y  L+ G  KA ++  A +VL  + S    PD  T  +++ SLC  
Sbjct: 138 YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK-LLDEM----------- 202
             ++ A ++ +++L        ITY+ L+       + D+A+  LL E+           
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT 257

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G +  A       E   C P  I+YN L+      G  +E  +L+ +M+
Sbjct: 258 YSTVIDGLCKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 314

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
                P+V+TY+ L+S+ C+ G+ +DA ++ +      L+PD  ++  L+   C +GR++
Sbjct: 315 DDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 374

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A+E L+ +   GC P I  YN ++  +CK+    +A E+       G  PN  +YN + 
Sbjct: 375 DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILV 434

Query: 377 SALWSSGDKIRALGMISEMLSKGIE-PDEIT-YNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +    +G   +AL  + ++ S+G   P  +  Y  ++  LCRDG  D+AV    +M    
Sbjct: 435 AGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           + P   ++  ++   CK  +  ++ E+L  M + G  P   T   ++      G   +A 
Sbjct: 495 YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKAD 554

Query: 495 ELANAL 500
           ELA+ L
Sbjct: 555 ELASEL 560



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 44/316 (13%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEE-GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           G   D  ++ ++LR L    K    G  L+ E+  RGL P+ V  + +++ LC    T  
Sbjct: 5   GYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTT 64

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +     E G       Y+ LI   CK   LD A+  L  M S G  P  + +N ++ 
Sbjct: 65  AMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIRALG--------- 390
             C+ G    AL ++ +++D   PP+  +Y  +   L  +G   D ++ L          
Sbjct: 124 GLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 391 -----------------------MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
                                  ++ EML +G+  + ITY++L+  LC+   +DEAV LL
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 428 VDMESTR--FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +  E TR  F P +++Y+ +I G CK  R+ +++++   M    C P   TY  LI G  
Sbjct: 243 LG-EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298

Query: 486 YGGWRAEAMELANALV 501
             G   EA+ L   +V
Sbjct: 299 RAGDMDEAIRLLGKMV 314


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 216/451 (47%), Gaps = 29/451 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL----EKYG-- 102
           R G F+     +E MV    +P+VV    LI    + R+ + A+ V+E +    E  G  
Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 376

Query: 103 ---EPDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIE 158
              EPDV  YN LI G CK  + +    +++R+RS +G +PD +TYN +I   C  G IE
Sbjct: 377 VSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
              ++FD++ ++   P V+T   L+                   GMC+ G V  A  F  
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVG------------------GMCRTGRVSSAVNFFV 478

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             + RG + D ++Y  L+    N+  +E+  +L  EM+  G  P+ + Y  LIS   + G
Sbjct: 479 EAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAG 538

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  DA  VL   K+ G+ PD   Y+ LI  +C+  +     E L  M   G  PD + YN
Sbjct: 539 RMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYN 598

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LS 397
           T++A   KNG+   A ++  K+   G  P V++Y  + +A   +G+   A+ +  +M  +
Sbjct: 599 TLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             + P+ + YN LI+ LC++  V  AV L+ DM+     P   +YN I  G    + + +
Sbjct: 659 SKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEK 718

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
             E +  M E  C P+  T  +L E +   G
Sbjct: 719 VFEFMDRMIEHACNPDYITMEILTEWLSAVG 749



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 212/454 (46%), Gaps = 64/454 (14%)

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSR 135
           +LI +  + RK+N+   +   + K G   +  A N+L++G  +       N++++++   
Sbjct: 275 RLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM 334

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL--------LRDNCKPTVITYTILIQATM 187
              P+VVT+ I+I  +C    ++ A +V +++        +  + +P V+ Y  LI    
Sbjct: 335 DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLID--- 391

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWE 246
                          G+CK G   +    +  + S +GC PD I+YN L+      G+ E
Sbjct: 392 ---------------GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +G++L  EM   G+ PNVVT + L+  +CR G+   AV+    A+ +G+  DA +Y  LI
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +A+C     + A+E  + M+  GC PD + Y T+++ F + G    A  +  +L  +G  
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS-------------- 412
           P+   YNT+      +    R   M+ EM   G++PD ITYN+LI+              
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKV 616

Query: 413 ---------------------CLCRDGMVDEAVGLLVDME-STRFRPTVISYNIIILGFC 450
                                  C +G  +EA+ +  DM+ +++  P  + YNI+I   C
Sbjct: 617 MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLC 676

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  ++  ++ ++  M   G  PN TTY  + +G+
Sbjct: 677 KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 192/410 (46%), Gaps = 28/410 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESM--------VANGCKPDVVMCTKLIKKFFQERKSNKA 91
           F  LI    +  + D++L  +E M        ++   +PDVV+   LI    +  +  + 
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402

Query: 92  VRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           + +ME +  +K   PD   YN LI GFCKA +IE   ++ D +   G +P+VVT N ++G
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVG 462

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            +C  G + SA   F +  R   K   +TYT LI A       +KAM+L +EM       
Sbjct: 463 GMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G  + G +  A   +  L+  G +PD + YN L+       K+    +++
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM   GL+P+ +TY+ LI+   ++G  + A  V+R   + G+ P   +Y  +I+AYC +
Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642

Query: 313 GRLDLAIE-FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           G  + A+E F D   +    P+ V YN ++ + CKN     A+ + E +   G  PN ++
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           YN +F  L    D  +    +  M+     PD IT   L   L   G ++
Sbjct: 703 YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 215/463 (46%), Gaps = 26/463 (5%)

Query: 48  FRAGKFDESLYFIESMVANG----CKPDVVMCTKLIKKFFQERKSNKAV----RVMEILE 99
            R+G+  ++L  I+ M  +     C+P+      ++  F  +R+ N+ +     ++ ++ 
Sbjct: 201 LRSGRVKDALKVIDEMFESNDDSNCRPNDA-TGDILFSFLLKRERNEELLSEDEIVNLVL 259

Query: 100 KYGEPDV----FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           K+GE  V    F    LI+  C+  +      +   +   G   +    N ++  L   G
Sbjct: 260 KFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAF 214
                 ++ ++++  + +P V+T+ ILI       + D A+++L++M G  + G +    
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI---- 375

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISS 273
                  S   +PDV+ YN L+  L  +G+ +EG  LM  M S +G  P+ +TY+ LI  
Sbjct: 376 -------SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+ G+ E   ++     ++G+ P+  + + L+   C+ GR+  A+ F       G   D
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V Y  ++ AFC   N ++A+E+F ++   GC P+   Y T+ S    +G    A  +++
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E+   GI PD + YN+LI   CR         +L +ME    +P  I+YN +I    K  
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +  + +V+  M + G  P   TY  +I      G   EAME+
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 18/284 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI        F++++     M+ +GC PD ++   LI  F Q  +   A  V+  L+
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN LI GFC+ N+     ++L  +   G  PD +TYN +I      G ++
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A KV  ++++    PTV TY  +I A  L G  ++AM++  +M    K           
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK----------- 660

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                   P+ + YN+L+ +L    K +    LM +M   G+ PN  TY+ +   L  + 
Sbjct: 661 ------VPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
             E   + +    E    PD  + + L       G ++   +F+
Sbjct: 715 DLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 57/294 (19%)

Query: 260 LEPNVV-TY--SILISSLCRDGKTEDAVDVL----------------------------R 288
           L+P+V  TY  ++ +S L R G+ +DA+ V+                            R
Sbjct: 183 LDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKR 242

Query: 289 AAKEKGLTPD-----------------AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              E+ L+ D                 ++    LI+  C++ + +   +    MI  G +
Sbjct: 243 ERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAV 302

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            +    N++L    + GN ++  E+ EK+ ++   PNV ++  + + +        AL +
Sbjct: 303 LESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEV 362

Query: 392 ISEM--------LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISY 442
           + +M        +S  +EPD + YN+LI  LC+ G   E +GL+  M S +   P  I+Y
Sbjct: 363 LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITY 422

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           N +I GFCK   I +  E+   M ++G  PN  T   L+ G+   G  + A+  
Sbjct: 423 NCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 212/397 (53%), Gaps = 20/397 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC-SRGMIE-SAFKVFDQ 166
           ++ ++  +   N I+ A   ++  +S GF P V++YN ++ ++  SRG ++ SA +V+ +
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           ++R    P V TY ILI+                  G C  G + +       +E  GC 
Sbjct: 205 MIRSRVSPNVYTYNILIR------------------GFCSVGELQKGLGCFGEMERNGCL 246

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++YN L+     MG+ +E   L+  M S+G++PN+++Y+++I+ LCR+G  ++A ++
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L     KG TPD  +Y+ L++ YCK+G    A+     M+ +G  P +V Y  ++ + CK
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N ++A+E F+++   G  PN  +Y T+       G    A  +++EM   G  P  +T
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+ I   C    ++EA+G++ +M      P V+SY+ II GFC+   ++ + ++   M 
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           EKG  P+  TY  LI+G+       EA +L+  ++ M
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 253/522 (48%), Gaps = 46/522 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G+  + L     M  NGC P+VV    LI  + +  + ++A  +++ +   G
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P++ +YN +I+G C+   ++ A ++L+ +  +GF+PD VTYN ++   C  G    A 
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  +++R+   P+V+TYT LI +       ++AM+  D+M                 G 
Sbjct: 340 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 399

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            ++G++ +A++ +  +   G  P V++YN  +     + + EE   ++ EM+ +GL P+V
Sbjct: 400 SRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV 459

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+YS +IS  CR G+ + A  + +   EKG++PDA +Y  LI   C+  RL  A +    
Sbjct: 460 VSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE 519

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  PD   Y T++ A+C  G+ ++AL + +++   G  P+  +Y+ + + L     
Sbjct: 520 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 579

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLI-SC--------------LCRDGMVDEAVGLLVD 429
              A  ++ +++ +   P ++TY++LI +C               C  G++ EA  +   
Sbjct: 580 TREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFES 639

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M     +P    YN+II G C+   + ++  +   M   G  P+  T + LI+ +   G 
Sbjct: 640 MVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGM 699

Query: 490 RAEAMELANALVSMHAISRDTFK--RLNRTFPLLDVYKEISH 529
             E  E+            DT +  RLN    L  V  EI+H
Sbjct: 700 NEEMSEVIG----------DTLRSCRLNEA-ELAKVLVEINH 730



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 22/453 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA-NQIELANKVLDR--LR 133
           ++K +      ++AV  + + +  G  P V +YN+++    ++   ++L+ + + R  +R
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           SR  SP+V TYNI+I   CS G ++     F ++ R+ C P V+TY  LI A    G+ D
Sbjct: 208 SR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +A  LL  M                 G+C++G + +A++ +  +  +G  PD ++YN LL
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                 G + +   +  EM+  G+ P+VVTY+ LI+S+C+      A++     + +GL 
Sbjct: 327 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 386

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  LI  + + G L+ A   L+ M   G  P +V YN  +   C     ++AL +
Sbjct: 387 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 446

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++ + G  P+V SY+T+ S     G+  RA  M  EM+ KG+ PD +TY+SLI  LC 
Sbjct: 447 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 506

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
              + EA  L  +M      P   +Y  +I  +C    +N+++ +   M  KG  P+  T
Sbjct: 507 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 566

Query: 477 YVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           Y +LI G+       EA  L   L+   ++  D
Sbjct: 567 YSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 20/470 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-- 90
           ++     F  ++K        D+++  I    ++G  P V+    ++    + R S K  
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  V  E++     P+V+ YN LI GFC   +++        +   G  P+VVTYN +I 
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM----- 204
           + C  G I+ AF +   +     +P +I+Y ++I     EG   +A ++L+EMG      
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 205 ------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                       CK+G   QA      +   G  P V++Y  L+ ++          +  
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M  RGL PN  TY+ LI    R G   +A  +L    E G +P   +Y+  I  +C  
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R++ A+  +  M+  G  PD+V+Y+TI++ FC+ G  D+A ++ +++ + G  P+  +Y
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +++   L        A  +  EML  G+ PDE TY +LI+  C +G +++A+ L  +M  
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             F P  ++Y+++I G  K  R  E+  +L  +  +   P++ TY  LIE
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 33/315 (10%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYN 110
           + +E+L  ++ MV  G  PDVV  + +I  F ++ + ++A ++  E++EK   PD   Y+
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +LI G C+  ++  A  +   +   G  PD  TY  +I + C  G +  A  + D+++  
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 558

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------------------- 202
              P  +TY++LI     + +T +A +LL ++                            
Sbjct: 559 GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVV 618

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C KG++ +A +   S+  R  +P    YN+++      G   +   L  EMI  
Sbjct: 619 ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS 678

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+ VT   LI +L ++G  E+  +V+          +A     L+    K+G ++  
Sbjct: 679 GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAV 738

Query: 319 IEFLDYMISDGCLPD 333
           +  L  M  DG LP+
Sbjct: 739 LNVLTDMAKDGLLPN 753



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 17/187 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI      G  +++L+  + M+  G  PD V  + LI    ++ ++ +A R++ 
Sbjct: 529 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLF 588

Query: 96  EILEKYGEPDVFAYN---------------ALISGFCKANQIELANKVLDRLRSRGFSPD 140
           +++ +   P    Y+               ALI GFC    +  A++V + +  R   P 
Sbjct: 589 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 648

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL- 199
              YN++I   C  G +  AF ++ +++     P  +T   LI+A   EG  ++  +++ 
Sbjct: 649 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 708

Query: 200 DEMGMCK 206
           D +  C+
Sbjct: 709 DTLRSCR 715


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 245/519 (47%), Gaps = 54/519 (10%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  D     +  +I    ++G+  E+      MV  G   D+V+CT ++   F+  KS +
Sbjct: 300 MGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKE 359

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  + + + K    P+   Y AL+ G CK   +E A  VL ++      P+VVT++ +I 
Sbjct: 360 AEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIIN 419

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
               +GM+  A +V  ++++ N  P V  Y IL+      GQ + A     EM       
Sbjct: 420 GYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEE 479

Query: 203 ---------------------------------------------GMCKKGMVGQAFQFV 217
                                                        G  K+G    A   V
Sbjct: 480 NNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVV 539

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +  +  Q DV++YN L + LL +GK+E  + + + MI  GL P+ VTY+ ++++    
Sbjct: 540 QEMTEKDMQFDVVAYNALTKGLLRLGKYEP-KSVFSRMIELGLTPDCVTYNSVMNTYFIQ 598

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GKTE+A+D+L   K  G+ P+  +Y+ LI   CK G ++  I  L  M++ G +P  + +
Sbjct: 599 GKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIH 658

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             +L A+ ++  AD  L+I +KL D+G   N   YNT+ + L   G   +A  +++EM+ 
Sbjct: 659 KFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI 718

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           KGI  D +TYN+LI   C    V++A      M  +   P + +YN ++ G      + +
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + ++++ M E+G  PN TTY +L+ G G  G + ++++L
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKL 817



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 225/497 (45%), Gaps = 54/497 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  L+    + G  + +   ++ M      P+VV  + +I  + ++   NKAV V+ +++
Sbjct: 379 YTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMV 438

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    P+VF Y  L+ G+ +  Q E A      ++S G   + + ++I++ +L   G ++
Sbjct: 439 QMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMK 498

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   +L       V  Y+ L+     EG    A+ ++ EM                
Sbjct: 499 EAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALT 558

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ + G       F R +E  G  PD ++YN ++ T    GK E    L+ EM S G+ 
Sbjct: 559 KGLLRLGKYEPKSVFSRMIE-LGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVM 617

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP---------DAYS----------- 301
           PN+VTY+ILI  LC+ G  E  + VL      G  P          AYS           
Sbjct: 618 PNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQI 677

Query: 302 ---------------YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                          Y+ LI+  C+ G    A   L  M+  G   DIV YN ++  +C 
Sbjct: 678 HKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCT 737

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             + ++A   + ++   G  PN+++YN +   L ++G    A  ++SEM  +G+ P+  T
Sbjct: 738 GSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATT 797

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN L+S   R G   +++ L  +M +  F PT  +YN++I  + K  ++ ++ E+L  M 
Sbjct: 798 YNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEML 857

Query: 467 EKGCKPNETTYVLLIEG 483
            +G  PN +TY +LI G
Sbjct: 858 TRGRIPNSSTYDVLICG 874



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 223/469 (47%), Gaps = 32/469 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R+G   E+   I+ +++ G   DV   + L+  +F+E   + A+ V+ E+ EK  + DV 
Sbjct: 493 RSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVV 552

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYNAL  G  +  + E    V  R+   G +PD VTYN ++ +   +G  E+A  + +++
Sbjct: 553 AYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEM 611

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P ++TY ILI                   G+CK G + +    +  + + G  P
Sbjct: 612 KSYGVMPNMVTYNILIG------------------GLCKTGAIEKVISVLHEMLAVGYVP 653

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             I +  LL+      K +   ++  +++  GL  N + Y+ LI+ LCR G T+ A  VL
Sbjct: 654 TPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVL 713

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KG++ D  +Y+ LI  YC    ++ A      M+  G  P+I  YN +L     N
Sbjct: 714 TEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTN 773

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A ++  ++ + G  PN ++YN + S     G+K  ++ +  EM++KG  P   TY
Sbjct: 774 GLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTY 833

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR------RI------ 455
           N LI    + G + +A  LL +M +    P   +Y+++I G+CK        R+      
Sbjct: 834 NVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQ 893

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           NE+ ++L  M EKG  P+E+T + +       G R +A  L   ++ ++
Sbjct: 894 NEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVIGLY 942



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 39/475 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G  D+    +  MV  G   D V C  L+K + Q      A  +M  L   G P D  
Sbjct: 87  KRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAI 146

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N L+ G+C+   +  A  +++     G  PD+VTYN ++ + C RG +  A  V +++
Sbjct: 147 GLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEI 206

Query: 168 L---RDN------------------CKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           L   RD+                   +PTV+T+T LI A       D    L ++M    
Sbjct: 207 LGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG 266

Query: 203 -------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+C+ G + +A   +R + + G  P+ +SY  ++  LL  G+  E  
Sbjct: 267 VMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
              ++M+ RG+  ++V  + ++  L + GK+++A ++ +   +  L P+  +Y  L+  +
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGH 386

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G ++ A   L  M  +  LP++V +++I+  + K G  ++A+E+  K+  +   PNV
Sbjct: 387 CKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNV 446

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
             Y  +    + +G    A G   EM S G+E + I ++ L++ L R G + EA  L+ D
Sbjct: 447 FVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKD 506

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           + S      V +Y+ ++ G+ K    + ++ V+  M EK  + +   Y  L +G+
Sbjct: 507 ILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGL 561



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 193/436 (44%), Gaps = 79/436 (18%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+VF+ N L+   CK   + LA   L  LR+  F  D VTYN ++   C RG+ +  F +
Sbjct: 43  PNVFSVNLLVHSLCKVGDLGLA---LGYLRNSVF--DHVTYNTVVWGFCKRGLADQGFGL 97

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++       +T  IL++                  G C+ G+V  A   + +L   
Sbjct: 98  LSEMVKKGVCFDSVTCNILVK------------------GYCQIGLVQYAEWIMGNLVGG 139

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG---KT 280
           G   D I  N L+     +G       L+ +    G++P++VTY+ L+++ C+ G   K 
Sbjct: 140 GVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKA 199

Query: 281 EDAVDVL---RAAKEKG---------------LTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           E  V+ +   R   E G               L P   ++  LI+AYCK   +D      
Sbjct: 200 ESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLY 259

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + MI  G +PD+V  ++IL   C++G   +A  +  ++ ++G  PN  SY T+ SAL  S
Sbjct: 260 EQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKS 319

Query: 383 GDKIRALGMISEMLSKGIE-----------------------------------PDEITY 407
           G  + A    S+M+ +GI                                    P+ +TY
Sbjct: 320 GRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTY 379

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L+   C+ G V+ A  +L  ME     P V++++ II G+ K   +N+++EVL  M +
Sbjct: 380 TALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQ 439

Query: 468 KGCKPNETTYVLLIEG 483
               PN   Y +L++G
Sbjct: 440 MNIMPNVFVYAILLDG 455



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 26/298 (8%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P +  +N LL      G   + + L +EM+  G+ PNV + ++L+ SLC+ G    A+  
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           LR +       D  +Y+ ++  +CK G  D     L  M+  G   D V  N ++  +C+
Sbjct: 68  LRNS-----VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A  I   L   G P +    NT+       G   RAL ++ +    G++PD +T
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182

Query: 407 YNSLISCLCRDG-------MVDEAVGLLVDMEST--------------RFRPTVISYNII 445
           YN+L++  C+ G       +V+E +G   D ES                 +PTV+++  +
Sbjct: 183 YNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I  +CK R I++   +   M   G  P+  T   ++ G+   G   EA  L   + +M
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 15/213 (7%)

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L P    ++ L+  +   G +         M+  G +P++ + N ++ + CK G+   AL
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 355 -----EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
                 +F+ +          +YNT+       G   +  G++SEM+ KG+  D +T N 
Sbjct: 66  GYLRNSVFDHV----------TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+   C+ G+V  A  ++ ++         I  N ++ G+C+   ++ +++++   ++ G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            KP+  TY  L+      G  A+A  + N ++ 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILG 208


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 222/442 (50%), Gaps = 29/442 (6%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F   I+   + G  D ++  ++ M   GC PDVV+ + LI  F ++   ++A+ ++
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +    +P+   YNA + G C A + E   +++  +  +G SP+  T++++I SLC   
Sbjct: 284 NTM--LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNN 341

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           +++SA +V +Q+ +  C+P  + Y I+I +    G+ D A++LL+ M             
Sbjct: 342 LVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV------------ 389

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                    C+PD + +N +L+      +W +  +L+ +M         +T++ILI  LC
Sbjct: 390 ---------CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLC 440

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G    A  V         TPD  +Y  L++ + + G +++AI+    M    C PDI 
Sbjct: 441 QNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIF 497

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +YN +L   C+    + A E+  ++    CPPN  ++N + ++L   G   RA+ ++ +M
Sbjct: 498 SYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            + G  PD  TYN+LI+     G +D+A+ LL  M     +P  ISYN  + G C+  R 
Sbjct: 558 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLKGLCRAERW 614

Query: 456 NESIEVLAAMFEKGCKPNETTY 477
            ++ E++A M    C PNE T+
Sbjct: 615 QDAEELVAEMLRNKCTPNEVTF 636



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 30/454 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    R G+  ++   + +  A G   +VV  T LI  + +  + + A+R++  +    
Sbjct: 130 LVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPV-- 186

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD + YN ++ G C A + E A +++  +      P+ VT+   I S C  G+++ A +
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + DQ+ R  C P V+ Y+ LI     +G  D+A+ LL+ M                    
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML------------------- 287

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C+P+ + YN  L+ L    +WE+  +LM EM+ +G  PN  T+S+LISSLC++   + 
Sbjct: 288 --CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDS 345

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           AV+VL   ++ G  PD  +Y+ +I++  + GR+D A+  L+ M+   C PD + +N +L 
Sbjct: 346 AVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLK 402

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FC+      A E+  ++    CP    ++N +   L  +G    A  +  +M      P
Sbjct: 403 GFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 462

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TY+SL++     G+V+ A+ L   M     +P + SYN ++ G C+  R  ++ E++
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMPC---KPDIFSYNAVLKGLCRAARWEDAGELI 519

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           A M  K C PNE T+ +LI  +   G    A+E+
Sbjct: 520 AEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 254/497 (51%), Gaps = 44/497 (8%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C + + ++ +R+ +S    P+T+          +  ++K    A K++E+   +  M+ N
Sbjct: 169 CRSGRLDDALRLIASMPVAPDTY---------TYNTVLKGLCIAKKWEEAEELMAEMIRN 219

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            C P+ V     I+ F Q    ++AV++++ + +YG  PDV  Y+ LI+GF +   ++ A
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQA 279

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              LD L +    P+ V YN  +  LC     E   ++  +++R  C P   T+++LI +
Sbjct: 280 ---LDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             +C+  +V  A + +  +E  GC+PD ++YN+++ +L   G+ 
Sbjct: 337 ------------------LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRV 378

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++  +L+  M+ +   P+ + ++ ++   CR  +  DA +++             +++ L
Sbjct: 379 DDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNIL 435

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I   C++G ++ A +  + M    C PDIV Y+++L  F + G  + A+++F  +    C
Sbjct: 436 IDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---C 492

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P++ SYN +   L  +     A  +I+EM+ K   P+E+T+N LI+ LC+ G+VD A+ 
Sbjct: 493 KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIE 552

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +L  M +    P + +YN +I GF +  R+++++++L+ M    CKP+  +Y   ++G+ 
Sbjct: 553 VLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLC 609

Query: 486 YGGWRAEAMELANALVS 502
               RAE  + A  LV+
Sbjct: 610 ----RAERWQDAEELVA 622


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 210/406 (51%), Gaps = 20/406 (4%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K  R +E+L +   P+   YN +I+GFC   +++ A  ++  +R RG  +P+  TY  
Sbjct: 127 AGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 186

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G ++ A KVFD++L +   KP  + Y  LI                   G C
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG------------------GYC 228

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A  +   +  RG    V +YN+L+  L   G+  E  +L+ EM  +GL P+V 
Sbjct: 229 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A+++      +G+     +Y  LI A  K G++    +  D  
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ +   +GN D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 408

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD +TYN+LIS     G V +A+ +  +M +  F PT+++YN +
Sbjct: 409 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 468

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           I G CK  + +++  ++  M E G  P+++TY+ LIEG+     RA
Sbjct: 469 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 514



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 199/394 (50%), Gaps = 22/394 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++      P+ VTYN +I   CSRG +++A  +  ++ 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ D+A+K+ DEM    KG V               +P
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEV---------------KP 215

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + GK +        M+ RG+   V TY++L+ +L  DG+  +A +++
Sbjct: 216 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL PD ++Y+ LI+ +CK+G +  A+E  + M   G    +V Y  ++ A  K 
Sbjct: 276 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 335

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +  ++F++    G  P++  YN + ++  +SG+  RA  ++ EM  K I PD++TY
Sbjct: 336 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 395

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G VDEA  L+ +M     +P +++YN +I G+     + +++ +   M  
Sbjct: 396 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 455

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P   TY  LI+G+   G   +A  +   +V
Sbjct: 456 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 174/339 (51%), Gaps = 20/339 (5%)

Query: 49  RAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           + G+ DE++   + M+  G  KP+ VM   LI  +  + K + A+   + ++E+     V
Sbjct: 193 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 252

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN L+       +   A ++++ +  +G +PDV TYNI+I   C  G ++ A ++F+ 
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + R   + TV+TYT LI A   +GQ  +  KL DE               VR    RG +
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA--------------VR----RGIR 354

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD++ YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC  G+ ++A  +
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    E+G+ PD  +Y+ LIS Y   G +  A+   + M++ G  P ++ YN ++   CK
Sbjct: 415 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           NG  D A  + +++ + G  P+ S+Y ++   L +  ++
Sbjct: 475 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 513



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G+  E+    +  V  G +PD+V+   LI         ++A  +M E+ 
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD   YN L+ G C   +++ A K++D +  RG  PD+VTYN +I     +G ++
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ ++++     PT++TY  LIQ                  G+CK G    A   V+
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQ------------------GLCKNGQGDDAENMVK 486

Query: 219 SLESRGCQPDVISYNMLLRTL 239
            +   G  PD  +Y  L+  L
Sbjct: 487 EMVENGITPDDSTYISLIEGL 507



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +  +  P   +++N M   L S+G   RAL    E+L +   P+ +TYN++I+
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIA 153

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-C 470
             C  G V  A+ ++ +M E     P   +Y  +I G+CK  R++E+++V   M  KG  
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 471 KPNETTYVLLIEG 483
           KP    Y  LI G
Sbjct: 214 KPEAVMYNALIGG 226


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 223/453 (49%), Gaps = 21/453 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  L++        + +L   E MV +GC+   V    L+    +E +  +A+R   
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF-- 291

Query: 97  ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           I E+ G  PD   +NAL++G C+   I+   +++D +  +GF  DV TYN +I  LC  G
Sbjct: 292 IYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLG 351

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ A ++   ++  +C+P  +TY  LI                    +CK+  V  A +
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGT------------------LCKENHVEAATE 393

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             R L S+G  PDV ++N L++ L      E   +L  EM  +G +P+  TYSILI SLC
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC 453

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
            + + ++A+ +L+  +  G   +   Y+ LI   CK+ R+  A +  D M   G     V
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   CK+   ++A ++ +++   G  P+  +Y TM       GD  RA  ++  M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              G EPD +TY +LI  LC+ G VD A  LL  ++      T  +YN +I   CK +R 
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            E++ +   M EKG  P+  TY ++  G+  GG
Sbjct: 634 KEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 221/438 (50%), Gaps = 22/438 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+ +E+L FI      G  PD V    L+    +     + + +M+ +LEK  E DV+
Sbjct: 281 KEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LISG CK  +I+ A ++L  + SR   P+ VTYN +IG+LC    +E+A ++   L
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P V T+  LIQ   L    + AM+L +EM                  + +GC P
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM------------------KEKGCDP 440

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D  +Y++L+ +L +  + +E   L+ EM   G   NVV Y+ LI  LC++ +  DA D+ 
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G++  + +Y+ LI+  CK  R++ A + +D MI +G  PD   Y T+L  FC+ 
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQ 560

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+  +A +I + ++  GC P++ +Y T+   L  +G    A  ++  +  KG+      Y
Sbjct: 561 GDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAY 620

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR-RINESIEVLAAMF 466
           N +I  LC+     EA+ L  +M      P VI+Y I+  G C     I E+++    M 
Sbjct: 621 NPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEML 680

Query: 467 EKGCKPNETTYVLLIEGI 484
           EKG  P   ++  L EG+
Sbjct: 681 EKGILPEFPSFGFLAEGL 698



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 246/506 (48%), Gaps = 29/506 (5%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
            P S+  + +   A  +PN     +    + F +L+++  RAG FD  L  +  M ++  
Sbjct: 69  QPDSSSALSLFQWASAQPN-----YSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKI 123

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIELA 125
             D       ++ +      +  +  + +L +     +PD   YN  +S   KAN+++L 
Sbjct: 124 PVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLV 183

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +  ++ +    PDV T+NI+I +LC    +  A  + + +     +P   T+T L+Q 
Sbjct: 184 ETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQG 243

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
            + E   + A+++       K+ MV             GC+   +S N+L+  L   G+ 
Sbjct: 244 FIEEADVEGALRI-------KELMV-----------ESGCELTSVSVNVLVNGLCKEGRI 285

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           EE  + + E    G  P+ VT++ L++ LCR G  +  ++++    EKG   D Y+Y+ L
Sbjct: 286 EEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           IS  CK G +D A+E L +M+S  C P+ V YNT++   CK  + + A E+   L+  G 
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V ++N++   L  + ++  A+ +  EM  KG +PDE TY+ LI  LC +  + EA+ 
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           LL +ME +     V+ YN +I G CK  R+ ++ ++   M   G   +  TY  LI G+ 
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 486 YGGWRAEAMELANALVSMHAISRDTF 511
                 EA +L + ++ M  +  D F
Sbjct: 524 KSKRVEEAAQLMDQMI-MEGLKPDKF 548



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 222/452 (49%), Gaps = 23/452 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  F  L+    R G   + L  ++ M+  G + DV     LI    +  + ++AV ++ 
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILH 361

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++ +  EP+   YN LI   CK N +E A ++   L S+G  PDV T+N +I  LC   
Sbjct: 362 HMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTS 421

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             E A ++F+++    C P   TY+ILI++   E +  +A+ LL EM             
Sbjct: 422 NREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYN 481

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK   VG A      +E  G     ++YN L+  L    + EE  +LM +MI  
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME 541

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL+P+  TY+ ++   C+ G  + A D+++     G  PD  +Y  LI   CK GR+D+A
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            + L  +   G +     YN ++ A CK     +A+ +F ++ + G PP+V +Y  +F  
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRG 661

Query: 379 LWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL-VDMESTRFR 436
           L + G  I+ A+    EML KGI P+  ++  L   LC   M D  + L+ + ME  RF 
Sbjct: 662 LCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFS 721

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +  S   II GF K ++ N+++  L A+ ++
Sbjct: 722 QSETS---IIRGFLKIQKFNDALANLGAILDR 750


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 223/461 (48%), Gaps = 18/461 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+     P ++   K++  F + +  + AV +   LE  G +PD+   N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI     VL ++  RG+ P  +T+  +I  LC +G +  A    D+LL    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
           K   ++Y  LI      G T  A+KL+ ++                  +CK  +V +A+ 
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               + ++G   DV++Y  L+       K +E   L+ EM+ + + PNV TY+IL+ +LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++GK ++A +VL    +  + PD  +Y  L+  Y     L  A    + M   G  PD+ 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y  ++  FCKN   D+AL +F+++      P + +Y+++   L  SG       +I EM
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +GI  + ITYNSLI  LC++G +D A+ L   M+    RP   ++ I++ G CK  R+
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++ E    +  KG   +   Y ++I G    G   EA+ +
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTM 501



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 206/416 (49%), Gaps = 17/416 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N ++  F K      A  +  RL  +G  PD++T NI+I   C  G I   F V
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P  IT+T LI+   L+GQ +KA+   D++                 G+CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + VR ++ R  +P+V  YN ++  L       E   L +EM ++G+  +VVT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C   K ++A+ +L     K + P+ Y+Y+ L+ A CK+G++  A   L  M+
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                PD++ Y+T++  +       +A  +F  +S +G  P+V SY  + +    +    
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL +  EM  K + P  +TY+SLI  LC+ G +     L+ +M        VI+YN +I
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G CK   ++ +I +   M ++G +P   T+ +L++G+  GG   +A E    L++
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLT 472



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 214/431 (49%), Gaps = 19/431 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK     G+ +++L+F + ++A G K D V    LI    +   +  A++++  ++
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 100 -KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  +P+V  YN +I   CK   +  A  +   + ++G S DVVTY  +I   C    ++
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + ++++     P V TY IL+ A                  +CK+G V +A   + 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDA------------------LCKEGKVKEAKNVLA 293

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +     +PDVI+Y+ L+     + + ++ + +   M   G+ P+V +Y+ILI+  C++ 
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNK 353

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A+++ +   +K + P   +Y  LI   CK GR+    + +D M   G   +++ YN
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYN 413

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++   CKNG+ D+A+ +F K+ D G  P   ++  +   L   G    A     ++L+K
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTK 473

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G   D   YN +I+  C+ G+++EA+ +L  ME     P  ++++III    K    +++
Sbjct: 474 GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKA 533

Query: 459 IEVLAAMFEKG 469
            ++L  M  +G
Sbjct: 534 EKLLRQMICRG 544



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           A K  E++  +  MV     P+V     L+    +E K  +A  V+ ++ K   +PDV  
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+ G+    +++ A  V + +   G +PDV +Y I+I   C   M++ A  +F ++ 
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH 366

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           + N  P ++TY+ LI      G+      L+DEM                 G+CK G + 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLD 426

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ +G +P   ++ +LL  L   G+ ++ ++   +++++G   +V  Y+++I
Sbjct: 427 RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G  E+A+ +L   +E G  P+A ++D +I+A  K    D A + L  MI  G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 97/206 (47%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ ++ K      A+     +   G  PD++  N ++  FC  G       
Sbjct: 56  TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+   G  P+  ++ T+   L   G   +AL    ++L++GI+ D+++Y +LI+ +C
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    A+ L+  ++    +P V  YN II   CK + ++E+  + + M  KG   +  
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G        EA+ L N +V
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMV 261



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 70/149 (46%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N D A+  F ++  +   P +  +N +  +         A+ +   +  KGI+PD IT N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+C C  G +     +L  +    ++P  I++  +I G C   ++N+++     +  +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           G K ++ +Y  LI G+   G    A++L 
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLV 187



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 367 PNVSSY--NTMFSALWSSGDKIR----ALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           PN SS+  N+  S   S    I+    A+   + ML     P  I +N ++    +    
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHY 75

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
             AV L   +E    +P +I+ NI+I  FC   +I     VLA + ++G +P+  T+  L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL 135

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I+G+   G   +A+   + L++
Sbjct: 136 IKGLCLKGQVNKALHFHDKLLA 157


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 208/399 (52%), Gaps = 20/399 (5%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K  R +E+L +   P+   YN +I+GFC   +++ A  ++  +R RG  +P+  TY  
Sbjct: 54  AGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 113

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G ++ A KVFD++L +   KP  + Y  LI                   G C
Sbjct: 114 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG------------------GYC 155

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A  +   +  RG    V +YN+L+  L   G+  E  +L+ EM  +GL P+V 
Sbjct: 156 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A+++      +G+     +Y  LI A  K G++    +  D  
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ +   +GN D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD +TYN+LIS     G V +A+ +  +M +  F PT+++YN +
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G CK  + +++  ++  M E G  P+++TY+ LIEG+
Sbjct: 396 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 200/394 (50%), Gaps = 22/394 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++      P+ VTYN +I   CSRG +++A  +  ++ 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ D+A+K+ DEM    KG V               +P
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEV---------------KP 142

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + GK +        M+ RG+   V TY++L+ +L  DG+  +A +++
Sbjct: 143 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 202

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL PD ++Y+ LI+ +CK+G +  A+E  + M   G    +V Y +++ A  K 
Sbjct: 203 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 262

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +  ++F++    G  P++  YN + ++  +SG+  RA  ++ EM  K I PD++TY
Sbjct: 263 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 322

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G VDEA  L+ +M     +P +++YN +I G+     + +++ +   M  
Sbjct: 323 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 382

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P   TY  LI+G+   G   +A  +   +V
Sbjct: 383 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 416



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 174/339 (51%), Gaps = 20/339 (5%)

Query: 49  RAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           + G+ DE++   + M+  G  KP+ VM   LI  +  + K + A+   + ++E+     V
Sbjct: 120 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN L+       +   A ++++ +  +G +PDV TYNI+I   C  G ++ A ++F+ 
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + R   + TV+TYT LI A   +GQ  +  KL DE               VR    RG +
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA--------------VR----RGIR 281

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD++ YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC  G+ ++A  +
Sbjct: 282 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 341

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    ++G+ PD  +Y+ LIS Y   G +  A+   + M++ G  P ++ YN ++   CK
Sbjct: 342 IDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 401

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           NG  D A  + +++ + G  P+ S+Y ++   L +  ++
Sbjct: 402 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 440



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G+  E+    +  V  G +PD+V+   LI         ++A  +M E+ 
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD   YN L+ G C   +++ A K++D +  RG  PD+VTYN +I     +G ++
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ ++++     PT++TY  LIQ                  G+CK G    A   V+
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQ------------------GLCKNGQGDDAENMVK 413

Query: 219 SLESRGCQPDVISYNMLLRTL 239
            +   G  PD  +Y  L+  L
Sbjct: 414 EMVENGITPDDSTYISLIEGL 434



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +  +  P   +++N M   L S+G   RAL    E+L +   P+ +TYN++I+
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIA 80

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-C 470
             C  G V  A+ ++ +M E     P   +Y  +I G+CK  R++E+++V   M  KG  
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 471 KPNETTYVLLIEG 483
           KP    Y  LI G
Sbjct: 141 KPEAVMYNALIGG 153


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 240/463 (51%), Gaps = 20/463 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            +G F ++      M   G  PDV   T  IK F + ++ + A+R++  +   G + +  
Sbjct: 123 ESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAV 182

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY  +++GF + N    A ++ + +   G  PDV T+N ++ +LC +G ++ + ++ +++
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKV 242

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+      + T+ I IQ                  G+C+KGM+  A   + S+   G  P
Sbjct: 243 LKKGMCSNLFTFNIFIQ------------------GLCRKGMLSGAMSMLDSVIREGLTP 284

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++YN L+  L       E EK + ++++ GLEP+  TY+ LI   C+ G  ++A  +L
Sbjct: 285 DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKIL 344

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           + A  KG  PD ++Y  LI+  C++  +D A+   +  +  G  P ++ YN ++   C+ 
Sbjct: 345 QGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQE 404

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   QAL++  ++S+ GC  ++ +YN + + L   G    A  ++++ ++KG  PD  T+
Sbjct: 405 GLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTF 464

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI   C+   ++  + +L  M S    P VI+YN ++ G  K  +  + +E    M E
Sbjct: 465 NTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE 524

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           KGC PN+ TY +L E +   G   EA++L + +++   I+ DT
Sbjct: 525 KGCVPNKITYNILTESLCKAGKVNEALDLVDEILN-KGITPDT 566



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 249/497 (50%), Gaps = 30/497 (6%)

Query: 16  VRVSSSAET-RPNTHLLSFDVKETQFMKLIKRSF---RAGKFDESLYFIES------MVA 65
           +R+ S   T RP++ L   +   +Q  +L   ++    AG ++E+ Y +E+      M+ 
Sbjct: 151 IRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN-YRVEAYELFNDMLR 209

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIEL 124
            G  PDV    KL+    ++ +  ++ R++ ++L+K    ++F +N  I G C+   +  
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A  +LD +   G +PDVVTYN +I  LC    +  A K   +L+    +P   TY  LI 
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 185 ATMLEGQTDKAMKLL----------DEM-------GMCKKGMVGQAFQFVRSLESRGCQP 227
                G    A K+L          DE        G+C+   + +A     +   +G +P
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            VI YNML++ L   G   +  ++M EM   G   ++ TY+++I+ LC+ G   DA +++
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
             A  KG  PD ++++ LI  YCK  +++  I+ L+ M S G  PD++ YN++L    K 
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              +  +E FE + + GC PN  +YN +  +L  +G    AL ++ E+L+KGI PD +++
Sbjct: 510 VKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSF 569

Query: 408 NSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            ++IS    +G +  A  L   M E  +   T  +YNI+I  F +   ++   ++   M 
Sbjct: 570 ATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMG 629

Query: 467 EKGCKPNETTYVLLIEG 483
             GC P+  TY ++I+G
Sbjct: 630 AGGCAPDTYTYRVMIDG 646



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 221/452 (48%), Gaps = 19/452 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F   I+   R G    ++  ++S++  G  PDVV    LI    +     +A + +  L 
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLV 313

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EPD F YN LI G+CK   ++ A K+L     +GF PD  TY  +I  LC    I+
Sbjct: 314 NGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+  L    KPTVI Y +LI+    EG   +A+++++EM                
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G V  A   +    ++G  PDV ++N L+       K E   +++ +M S G+ 
Sbjct: 434 NGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT 493

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+TY+ +++ L +  K ED ++      EKG  P+  +Y+ L  + CK G+++ A++ 
Sbjct: 494 PDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDL 553

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALW 380
           +D +++ G  PD V++ TI++ F  NG+   A ++F ++ +        ++YN M +A  
Sbjct: 554 VDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFA 613

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
              D      +  EM + G  PD  TY  +I   C  G  D     L++M    F P++ 
Sbjct: 614 EKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLT 673

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           ++  +I   C   R++E+++++  M   G  P
Sbjct: 674 TFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 229/468 (48%), Gaps = 19/468 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG- 102
           IK   R  +   +L  + +MV+ GC+ + V    ++  F++E    +A  +   + + G 
Sbjct: 153 IKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGI 212

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDV  +N L+   CK  +++ + ++L+++  +G   ++ T+NI I  LC +GM+  A  
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMS 272

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D ++R+   P V+TY  LI                   G+CK   V +A +++  L +
Sbjct: 273 MLDSVIREGLTPDVVTYNTLI------------------CGLCKNSNVVEAEKYLHKLVN 314

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G +PD  +YN L+     MG  +  EK++   I +G  P+  TY  LI+ LC++ + + 
Sbjct: 315 GGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDR 374

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +  AA  KGL P    Y+ LI   C++G +  A++ ++ M  +GC  DI  YN ++ 
Sbjct: 375 ALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVIN 434

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK G    A  +       G  P+V ++NT+             + ++++M S G+ P
Sbjct: 435 GLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTP 494

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITYNS+++ L +    ++ +     M      P  I+YNI+    CK  ++NE+++++
Sbjct: 495 DVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLV 554

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
             +  KG  P+  ++  +I G    G    A +L   +   + +S  T
Sbjct: 555 DEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTT 602



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 19/313 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK   + G   ++L  +  M  NGC  D+     +I    +    + A  +M + + K 
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF +N LI G+CK  ++E   ++L+++ S G +PDV+TYN ++  L      E   
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           + F+ ++   C P  ITY IL ++    G+ ++A+ L+DE+                 G 
Sbjct: 517 ETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576

Query: 205 CKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
              G +  A+Q  R + E         +YN+++           GEKL  EM + G  P+
Sbjct: 577 ANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPD 636

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY ++I   C  G T+     L    EKG  P   ++  +I+  C   R+  A++ + 
Sbjct: 637 TYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696

Query: 324 YMISDGCLPDIVN 336
           +M+ +G +P++VN
Sbjct: 697 FMVHNGIVPEVVN 709


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 206/407 (50%), Gaps = 18/407 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L     P++F +NA+I   C   +++ A  ++  +   G  PD  TY  +I   C  
Sbjct: 191 IEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKN 250

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G ++ AF++FD++++D C P  +TY+ LI     EG+ ++AM +L+EM            
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM------------ 298

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                   +G +P V +Y + + +L + G+  E  KL+ +M  RG  PNV TY+ LIS L
Sbjct: 299 ------IDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            RDGK E A+ V       GL P A +Y  LI+    +GR + A+   ++M+S   LP+ 
Sbjct: 353 SRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT 412

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN I+  FC  G   +A  IF+++   G  PNV +YN +    +  G    A+ ++  
Sbjct: 413 ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEM 472

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G++ D  TY +LIS   R G ++ A  L  +M      P V++YN II G+    +
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +++++ +   M E G  P+  TY ++I G       +EA      +V
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV 579



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 231/462 (50%), Gaps = 23/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    + G  D +    + MV +GC P+ V  + LI     E +  +A+ ++E ++
Sbjct: 240 YTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI 299

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  EP V AY   I   C A +   A K+L +++ RG  P+V TY  +I  L   G  E
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  V+ ++L D   PT +TY+ LI    +EG+ + A+ +               F+++ 
Sbjct: 360 VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI---------------FEWML 404

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S +S    P+  +YN++++   ++G  ++   +  +M+  G  PNV+TY+I+I    + G
Sbjct: 405 SHDSL---PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              +A+ +L   K  GL  D ++Y  LIS + + G+L+ A    + M+  G  P++V YN
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+  +      D AL +F K+ + G  P+  +YN M S    +     A     +M+ +
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ 581

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+ ITY S I  LC++G    A  +  +M+   + P + +Y+ +I G C+  +  ++
Sbjct: 582 GLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +L    + GC+PN  TY  L+ G+   G   EA +L  ++
Sbjct: 642 ERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 216/504 (42%), Gaps = 57/504 (11%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+  E++  +  M   GC P+V   T LI    ++ K   A+ V   +   G  P    
Sbjct: 320 AGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT 379

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ALI+      + E A  + + + S    P+  TYN++I   CS G I+ A  +FDQ+L
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +    P VITY I+I     +G  + AM+LL+ M                 G  + G + 
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK--------WE----------------- 246
            AF     +   G  P+V++YN ++   L + K        W+                 
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 247 ----------EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                     E E    +M+ +GL PNV+TY+  I  LC++G+T  A  +    K++   
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  LI   C++G+ + A   LD    DGC P++  Y T++   C  G   +A ++
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQL 675

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            E +   G  P+   Y  +      + +   AL +   M++ G +P    Y +LI  LC+
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
                +A  +   M    +    + + +++ G  K    + S+E+L  M  + C  N  T
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795

Query: 477 YVLLIEGIGYGGWRAEAMELANAL 500
            V+L   +   G   E  +++  L
Sbjct: 796 RVMLARELSALGCSIEIPQISKQL 819



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 27/331 (8%)

Query: 163 VFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           + ++L+RD    P      ++I++   EG+  + +++L E        +   + F  +L 
Sbjct: 117 MLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSE--------INTTYDFGYTL- 167

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEE---GEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                    S++ LL   + +GK++    G  +  EM++ G+ PN+ T++ +I  LC  G
Sbjct: 168 --------YSFSTLL---IQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKG 216

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A  ++      G  PD ++Y  LI  +CK+G LDLA E  D M+ DGC P+ V Y+
Sbjct: 217 KVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYS 276

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++   C  G  ++A+++ E++ D G  P V +Y     +L  +G    A+ ++ +M  +
Sbjct: 277 ALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR 336

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+  TY +LIS L RDG  + A+G+   M +    PT ++Y+ +I       R   +
Sbjct: 337 GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETA 396

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG---IGY 486
           + +   M      PN  TY ++I+G   IGY
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 105/222 (47%)

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           DV       G+ P+ ++++ +I   C  G++  A   + ++   G  PD   Y +++   
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CKNGN D A E+F+++   GC PN  +Y+ + + L S G    A+ M+ EM+ KGIEP  
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             Y   I  LC  G   EAV LL  M+     P V +Y  +I G  +  +   +I V   
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           M   G  P   TY  LI  +   G    A+ +   ++S  ++
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL 409



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 79/163 (48%)

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           + +++T+L    K        +++ ++ + G  PN+ ++N M   L + G    A  ++ 
Sbjct: 167 LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMG 226

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            +   G  PD  TY SLI   C++G +D A  +   M      P  ++Y+ +I G C   
Sbjct: 227 HIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEG 286

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ E++++L  M +KG +P    Y + I  +   G   EA++L
Sbjct: 287 RLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKL 329



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 75/169 (44%), Gaps = 1/169 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++     G+  E+   +ESM   G +P   +   L+    +  +   A+++ + + 
Sbjct: 656 YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P +  Y ALI   CKAN  + A  +   +  + ++ D V + +++  L   G  +
Sbjct: 716 TTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
            + ++   +   NC     T  +L +     G + +  ++  ++G+ K+
Sbjct: 776 LSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKE 824


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 231/459 (50%), Gaps = 19/459 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF K++    ++  +   +     M  NG   D+V+ + LI  F Q  ++  +  V+  +
Sbjct: 74  QFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKI 133

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP+V     LI G C   QI  A +  D++ + GF  + V+Y  +I  LC  G  
Sbjct: 134 LKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQT 193

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++     +P V+ Y  +I +                  MCK  +V +AF   
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNTIIDS------------------MCKVKLVNEAFDLY 235

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+G  PDV++YN L+     +GK ++   L  +MI   + PNV T++IL+   C++
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + ++A +VL    ++G+ PD ++Y+ L+  YC    ++ A    + +   G  P+I +Y
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++  FCK    D+A+ +F+++      P+V +YN++   L   G    AL ++ EM  
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G+  D+ITYNS++  LC++  VD+A+ LL  M+    +P + +Y  ++ G CK  R+ +
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLED 475

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +  V   +  KG   +   Y  +I+G    G   E+++L
Sbjct: 476 ARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 215/432 (49%), Gaps = 21/432 (4%)

Query: 83  FQERKSNKAVRVME----ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
           F E   NK   V      + +K  +P +F +  ++    K+N       +  ++   G +
Sbjct: 45  FHENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGIT 104

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            D+V  +I+I      G    +F V  ++L+   +P VIT T LI+   L+GQ  +A++ 
Sbjct: 105 SDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQF 164

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            D++                 G+CK G    A Q +R ++ +  QP+V+ YN ++ ++  
Sbjct: 165 HDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 224

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +    E   L +EM+S+G+ P+VVTY+ LIS  C  GK +DA D+      + + P+ Y+
Sbjct: 225 VKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYT 284

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++ L+  +CK+ RL  A   L  M+  G  PD+  YN+++  +C     ++A  IF  +S
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  PN+ SY+ M            A+ +  EM    I PD +TYNSLI  LC+ G + 
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A+ L+ +M         I+YN I+   CK  +++++I +L  M ++G +P+  TY  L+
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464

Query: 482 EGIGYGGWRAEA 493
           +G+   G   +A
Sbjct: 465 DGLCKNGRLEDA 476



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 214/428 (50%), Gaps = 19/428 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     G+  ++L F + +VA G   + V    LI    +  +++ A++++  ++ K 
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  YN +I   CK   +  A  +   + S+G SPDVVTYN +I   C  G ++ A 
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F++++ +N  P V T+ IL+                   G CK+  + +A   +  + 
Sbjct: 268 DLFNKMIFENINPNVYTFNILVD------------------GFCKERRLKEAKNVLAMMM 309

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G +PDV +YN L+     + +  + + +   +  RG+ PN+ +YSI+I   C+  K +
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+++ +      + PD  +Y+ LI   CK G++  A++ +D M   G   D + YN+IL
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            A CKN   D+A+ +  K+ D G  P++ +Y T+   L  +G    A  +  ++L KG  
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            D   Y ++I   C  G+ DE++ LL  ME     P  ++Y III         +++ ++
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549

Query: 462 LAAMFEKG 469
           L  M  +G
Sbjct: 550 LREMITRG 557



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 196/388 (50%), Gaps = 18/388 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F + +  +  LI    + G+   +L  +  +     +P+VVM   +I    + +  N+
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E++ K   PDV  YNALISGFC   +++ A  + +++     +P+V T+NI++ 
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C    ++ A  V   +++   KP V TY  L+    L  + +KA  + + +       
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK   V +A    + +      PDV++YN L+  L  +GK     KL+
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  RG+  + +TY+ ++ +LC++ + + A+ +L   K++G+ PD  +Y  L+   CK+
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GRL+ A    + ++  G + D+  Y  ++  FC +G  D++L++  K+ + GC PN  +Y
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
             +  +L+   +  +A  ++ EM+++G+
Sbjct: 531 EIIICSLFDKDENDKAEKLLREMITRGL 558



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 100/214 (46%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R   +K   P  + +  ++ +  K       +     M  +G   D+V  + ++  F + 
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    +  +  K+  +G  PNV +  T+   L   G   +AL    ++++ G   ++++Y
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +LI+ LC+ G    A+ LL  ++    +P V+ YN II   CK + +NE+ ++ + M  
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P+  TY  LI G    G   +A +L N ++
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMI 274


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 226/441 (51%), Gaps = 23/441 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDV 106
           +AG   ++L   E+M +  C P +V    LI       +  KA+ + + +  EK  EPD 
Sbjct: 22  KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDR 81

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + YN LISG C +   E A K+L  +R +  + +V TY+ +I SL      E ++KV ++
Sbjct: 82  WTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEE 141

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           ++   C P V  +  ++Q        +KA ++   M                 +ES G +
Sbjct: 142 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM-----------------VES-GYK 183

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISR--GLEPNVVTYSILISSLCRDGKTEDAV 284
           PD +SY++L+  L  +GK +E  K+++EM  R  G  PNV+T+S LI  LCR G+ E A+
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +V  +  E G  P+ Y+Y  LI+  C+  ++  A E  + M      PD V YN+++A +
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 303

Query: 345 CKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           CK G+ D+A +++ ++S   G  P + ++NT+       G   RA  +++EM +KG+  D
Sbjct: 304 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 363

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY  LI+ L R   +DEA+ +   M   +F    +S    + G CKT  I+++  V  
Sbjct: 364 TCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 423

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
           A  + G  PN  T+ +L E +
Sbjct: 424 ATRKSGAVPNPETFRILSESL 444



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 201/393 (51%), Gaps = 22/393 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY+ ++    KA  +  A +V + ++S    P +VTYN++I S C+ G    A  +F  +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 168 LRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
            R+   +P   TY  LI      G T+ A KLL EM                    +   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEM------------------RDKNIA 113

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
            +V +Y+ ++++L+   K EE  K++ EM++ G  P+V  ++ ++    R    E A +V
Sbjct: 114 ANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREV 173

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI--SDGCLPDIVNYNTILAAF 344
            +   E G  PD  SY  LI    K G+LD +++ L  M   + G +P+++ ++T++   
Sbjct: 174 YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGL 233

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+ G  ++ALE+F  + + GC PN  +Y T+ + L  +   I+A  +  +M    I PD 
Sbjct: 234 CRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDA 293

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDME-STRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           + YNSLI+  C+ G +DEA  L  +M      +PT++++N +I GFCK  ++  + E++A
Sbjct: 294 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 353

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M  KG   +  TY +LI G+       EA+E+
Sbjct: 354 EMGTKGLAADTCTYRILIAGLSRATKLDEALEV 386



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 22/348 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +IK   +  K +ES   +E M+A GC PDV     +++ F +     KA  V + + 
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRL--RSRGFSPDVVTYNIMIGSLCSRGM 156
           + G +PD  +Y+ LI G  K  +++ + K+L  +  R+ G+ P+V+T++ +I  LC  G 
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E A +VF  +L   CKP   TYT LI                   G+C+   V QA + 
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIA------------------GLCRAEKVIQAREL 280

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLC 275
              +      PD ++YN L+      G  +E EKL  EM    GL+P +VT++ LI   C
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK   A +++     KGL  D  +Y  LI+   +  +LD A+E    M     L D V
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
           +  + +   CK GN DQA  +FE     G  PN  ++  +  +L   G
Sbjct: 401 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 448



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    R G+ +++L    SM+  GCKP+    T LI       ++ K ++  E+ E
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLC---RAEKVIQARELFE 282

Query: 100 KYGE----PDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSR 154
           K  +    PD  AYN+LI+G+CK   ++ A K+   +    G  P +VT+N +I   C  
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G +  A ++  ++          TY ILI       + D+A+++  +M            
Sbjct: 343 GKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK G + QA+    +    G  P+  ++ +L  +L+ +G+ E+ +KLM    +
Sbjct: 403 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKA 462

Query: 258 R 258
           R
Sbjct: 463 R 463


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 208/390 (53%), Gaps = 21/390 (5%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++ +  EP + ++N +I+G CK  ++  A  +++ ++ RG S +V+TYN +I   C  G
Sbjct: 153 EMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMG 212

Query: 156 MIESAFK---VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
            I   +K   +  ++  D   P  +T+ ILI                   G CK   V  
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILID------------------GFCKDKNVSA 254

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +    +  +G +P+V++YN L+  L N GK  E   L  +M++  L+PN++T++ L++
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C++   + A ++     ++G+TP+  +Y+ LI AYCKD  ++ A      M+  G  P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+  YN ++A  C+ G+ + A  +  ++       ++ +YN +  +L + G+  +AL ++
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM  KG++P ++TYN++I   C++G +  A+ L   ME       V +YN++I GFCK 
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKK 494

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            ++ ++  +L  M EKG  PN  TY ++ E
Sbjct: 495 DKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 207/436 (47%), Gaps = 23/436 (5%)

Query: 13  NERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV 72
           N R R+   A  R + + L   V  T    L+    + G+  +  +  + M+    +P +
Sbjct: 106 NLRTRLGFEAFKRASDYGLKLSV--TSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTL 163

Query: 73  VMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIEL---ANKV 128
           +    +I    +  K NKA  ++E ++  G   +V  YN LI G+CK  +I     A+ +
Sbjct: 164 ISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAI 223

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L  +R+ G  P+ VT+NI+I   C    + +A KVF ++ R   KP V+TY  LI     
Sbjct: 224 LKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCN 283

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G+ ++A  L D+M                 G CK  MV QA +    +  +G  P+V +
Sbjct: 284 NGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+L+         E+   L   M+ +G+ P+V TY+ LI+ LCR G  E A +++    
Sbjct: 344 YNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMD 403

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            K L  D  +Y+ LI + C  G +  A+  LD M   G  P  + YNT++  +CK GN  
Sbjct: 404 TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            AL +  ++  VG   NV++YN +            A G+++EML KG+ P+ +TY  + 
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT 523

Query: 412 SCLCRDGMVDEAVGLL 427
             +   G V +  G L
Sbjct: 524 EEMMEKGFVPDIEGHL 539



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 194/388 (50%), Gaps = 21/388 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  + K  +  L  +   R    G    V + N ++  L   G I     V+ +++R  
Sbjct: 99  LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +PT+I++ I+I                   G+CK G + +A   +  ++ RG   +VI+
Sbjct: 159 IEPTLISFNIVIN------------------GLCKVGKLNKAGDIIEDMKVRGVSANVIT 200

Query: 232 YNMLLRTLLNMGK---WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           YN L+     MGK     + + ++ EM + G+ PN VT++ILI   C+D     A+ V  
Sbjct: 201 YNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFA 260

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G+ P+  +Y+ LI+  C +G+++ A    D M++    P+I+ +N +L  FCKN 
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNK 320

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              QA E+F+ +   G  PNV++YN +  A     +   A  +   ML KG+ PD  TYN
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+ LCR G ++ A  L+ +M++   +  +I+YNI+I   C    + +++ +L  M  K
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G KP++ TY  +I+G    G    A+ L
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNL 468



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 162/295 (54%), Gaps = 3/295 (1%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            F+  +     G +  V S N L+  L+ +G+  + E +  EMI R +EP +++++I+I+
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL---AIEFLDYMISDG 329
            LC+ GK   A D++   K +G++ +  +Y+ LI  YCK G++     A   L  M +DG
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+ V +N ++  FCK+ N   A+++F +++  G  PNV +YN++ + L ++G    A 
Sbjct: 232 ICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  +M++  ++P+ IT+N+L++  C++ MV +A  L  DM      P V +YNI+I  +
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           CK   + ++  +   M  KG  P+ +TY  LI G+   G    A  L + + + H
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 229/457 (50%), Gaps = 25/457 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVF 107
           AG+ D     + +++  G + D +  T L+K    +++++ A+  V+  + + G  P+VF
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +YN L+ G C  N+ + A ++L  +   G    PDVV+Y  +I      G ++ A+  + 
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++L     P V+TY+ +I A       DKAM++L  M                 G C  G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGL+P + TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+      G   +   +L      G+ P+ Y +  LI AY K G++D A+     M   
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKI 386
           G  PD V Y T++   CK+G  + A+  FE++ D    P    YN++  +L  +   DK 
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + L  I EML +GI  D I +NS+I   C++G V E+  L   M     +P +I+Y+ +I
Sbjct: 464 KEL--ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 236/458 (51%), Gaps = 19/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  P+VV  + +I    + +  +KA+ V+  + 
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++ S G  PDVVTYN ++  LC  G   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 367

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  P+   +++L+      GK ++   + ++M  +GL P+ VTY  +I  LC+ G
Sbjct: 368 N----GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++ L+P    Y+ LI + C   + D A E +  M+  G   D + +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  P++ +Y+T+      +G    A  +++ M+S 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+   + E G +   +TY +++ G+       EA+ +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D+++  + SMV NG  P+      ++  +    +  +A+  ++ +   G EPDV 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+   CK  +   A K+ D +  RG  P++ TY  ++    ++G +     + D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           +R+   P    ++ILI A   +G+ D+AM +  +M                  +CK G V
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A ++   +      P  I YN L+ +L    KW++ ++L+ EM+ RG+  + + ++ +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G+  ++  +       G+ PD  +Y  LI  YC  G++D A + L  M+S G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V YNT++  +CK    + AL +F ++   G  P++ +YN +   L+ +     A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    ++NI+I    
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R +E+ ++ AA+   G  P+  TY L+ E +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 17/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P++  Y  LI   C A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++ +  C P V +Y IL++    E ++ +A++LL  M                  + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM----------------PDDG 192

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV+SY  ++      G  ++      EM+ RG+ PNVVTYS +I++LC+    + 
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL +  + G+ P+  +Y+ ++  YC  G+   AI FL  M SDG  PD+V YN+++ 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A ++F+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++   P    Y  LI  +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSL 454



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 3/242 (1%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+ TY ILI S C  G+ +     L    +KG   DA ++ PL+   C D R   A++ 
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 322 -LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSA 378
            L  M   GC+P++ +YN +L   C    + +ALE+ + + D G  CPP+V SY T+ + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
            +  GD  +A G   EML +GI P+ +TY+S+I+ LC+   +D+A+ +L  M      P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +YN I+ G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 499 AL 500
           ++
Sbjct: 329 SM 330


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 231/515 (44%), Gaps = 75/515 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    R G+ D  +     M       +    T L+K F    K   A+     + 
Sbjct: 81  FCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKIT 140

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P V  ++ L+ G C  ++I  A  +  ++      P+VVT+  ++  LC  G + 
Sbjct: 141 KLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVV 196

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D++L D  +P  ITY  ++      G T  A+ LL +M                
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE 256

Query: 203 -------GMCKKGMVGQAFQFVRS-LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                  G C  G   +A Q ++  LE +   PDV++YN L+   +  GK+ E E+L  E
Sbjct: 257 RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDE 316

Query: 255 MISRGLEPNVVTYS-----------------------------------ILISSLCRDGK 279
           M+ RG+ P+ +TYS                                    LI+  CR  +
Sbjct: 317 MLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +D + +L    E GL  +  +Y  LI  +C+ G L+ A + L  M+S G  P++V  NT
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436

Query: 340 ILAAFCKNGNADQALEIFEKLS----DV-------GCPPNVSSYNTMFSALWSSGDKIRA 388
           +L   C NG    ALE+F+ +     D+       G  P+V +YN + S L + G  + A
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM  +GI PD ITYNS+I  LC+   +DEA  +   M S  F P V+++  +I G
Sbjct: 497 EELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 556

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +CK  R+++ +E+   M  +G   N  TY+ LI G
Sbjct: 557 YCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 249/556 (44%), Gaps = 87/556 (15%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            ++++     MV +   P V+   KL+    +  + +  + +   +E    P + +++  
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  FC  +++  A     ++   GF P VVT++ ++  LC    I  A  +F Q+    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           CKP V+T+T L+     EG+  +A+ LLD M                 GMCK G    A 
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 215 QFVRSLES-RGCQPDVISYNMLLRTLL-----NMGKWEEGEKLMTEMISRG-LEPNVVTY 267
             +R +E     +P+V+ + +  RT +     + G+W E ++L+ EM+ R  + P+VVTY
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI++  ++GK  +A ++      +G+ P   +Y  +I  +CK  RLD A      M +
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC PDI+ +NT++A +C+    D  +++  ++++ G   N  +Y T+       GD   
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 388 ALGMISEMLS----------------------------------------------KGIE 401
           A  ++ EM+S                                               G+E
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  TYN LIS L  +G   EA  L  +M      P  I+YN +I G CK  R++E+ ++
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL----------ANALVSMHAISRDTF 511
             +M  K   PN  T+  LI G    G   + +EL          ANA+  +  I    F
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIH--GF 592

Query: 512 KRLNRTFPLLDVYKEI 527
           +++      LD+++E+
Sbjct: 593 RKVGNINGALDIFQEM 608



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 188/376 (50%), Gaps = 30/376 (7%)

Query: 50  AGKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +G++ E+   ++ M+      PDVV    LI  F +E K  +A  +  E+L +   P   
Sbjct: 268 SGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTI 327

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+++I GFCK N+++ A  +   + ++G SPD++T+N +I   C    ++   K+  ++
Sbjct: 328 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 387

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                    ITYT LI      G  + A  LL EM                 G+C  G +
Sbjct: 388 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKL 447

Query: 211 GQAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
             A +  ++++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG
Sbjct: 448 KDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 507

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + P+ +TY+ +I  LC+  + ++A  +  +   K  +P+  ++  LI+ YCK GR+D  +
Sbjct: 508 IVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 567

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E    M   G + + + Y T++  F K GN + AL+IF+++   G  P+  +   M + L
Sbjct: 568 ELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627

Query: 380 WSSGDKIRALGMISEM 395
           WS  +  RA+ M+ ++
Sbjct: 628 WSKEELKRAVAMLEDL 643



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 195/398 (48%), Gaps = 35/398 (8%)

Query: 69  KPDVVMC-----TKLIKKFFQERKSNKAVRVM-EILE-KYGEPDVFAYNALISGFCKANQ 121
           KP+VV+      T +I  F    + ++A +++ E+LE K   PDV  YNALI+ F K  +
Sbjct: 247 KPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGK 306

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A ++ D +  RG  P  +TY+ MI   C +  +++A  +F  +    C P +IT+  
Sbjct: 307 FFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNT 366

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI       + D  +KLL EM                 G C+ G +  A   ++ + S G
Sbjct: 367 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG 426

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------RGLEPNVVTYSILISS 273
             P+V++ N LL  L + GK ++  ++   M              G+EP+V TY+ILIS 
Sbjct: 427 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISG 486

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L  +GK  +A ++      +G+ PD  +Y+ +I   CK  RLD A +  D M S    P+
Sbjct: 487 LINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPN 546

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V + T++  +CK G  D  LE+F ++   G   N  +Y T+       G+   AL +  
Sbjct: 547 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQ 606

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           EM++ G+ PD IT  ++++ L     +  AV +L D++
Sbjct: 607 EMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 150/325 (46%), Gaps = 30/325 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  + D + +    M   GC PD++    LI  + + ++ +  ++++  + + G   +  
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI GFC+   +  A  +L  + S G  P+VVT N ++  LC  G ++ A ++F  +
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457

Query: 168 LR-----------DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
            +           +  +P V TY ILI   + EG+  +A +L +EM              
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-------------- 503

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 RG  PD I+YN ++  L    + +E  ++   M S+   PNVVT++ LI+  C+
Sbjct: 504 ----PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 559

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+ +D +++      +G+  +A +Y  LI  + K G ++ A++    M++ G  PD + 
Sbjct: 560 AGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619

Query: 337 YNTILAAFCKNGNADQALEIFEKLS 361
              +L          +A+ + E L 
Sbjct: 620 IRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G  + +   ++ MV++G  P+VV C  L+       K   A+ + + ++
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 100 KYG------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           K              EPDV  YN LISG     +   A ++ + +  RG  PD +TYN +
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I  LC +  ++ A ++FD +   +  P V+T+T LI      G+ D  ++L  EMG  ++
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG--RR 576

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G+V  A                I+Y  L+     +G       +  EM++ G+ P+ +T 
Sbjct: 577 GIVANA----------------ITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 268 SILISSLCRDGKTEDAVDVL 287
             +++ L    + + AV +L
Sbjct: 621 RNMLTGLWSKEELKRAVAML 640



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 1/163 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI      GKF E+    E M   G  PD +    +I    ++ + ++A ++ + +  K 
Sbjct: 483 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  +  LI+G+CKA +++   ++   +  RG   + +TY  +I      G I  A 
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGAL 602

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
            +F +++     P  IT   ++     + +  +A+ +L+++ M
Sbjct: 603 DIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 236/470 (50%), Gaps = 19/470 (4%)

Query: 34  DVKETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA- 91
           D K T    L+ R++    K +E+L     +   G  P++  C +++  F +  ++  A 
Sbjct: 142 DAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAW 201

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           V   E+        ++ +N +I+  CK  +++ A + +  + + G  P+VVTYN +I   
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C RG  + A  +F  +     +P   TY   I     EG+ ++A  L+ +M         
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C KG + +A+ +   + S+G    +++YN+ +  L   G+  + + ++ E
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  +G+ P+ VT++ILI+  CR G  + A  +L     KG+ P   +Y  LI    K  R
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A      +  +G LPDI+ +N ++   C NGN D+A ++ +++ ++   P+  +YNT
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +       G    A  ++ EM  +GI+PD I+YN+LIS   + G + +A  +  +M +T 
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           F PT+++YN +I G CK +    + E+L  M  KG  P+++TY+ +IE +
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 209/429 (48%), Gaps = 53/429 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           ++ L+  +C+  +   A +    ++ +GF P++ T N M+         + A+ ++ ++ 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R N + ++ T+ I+I                    +CK+G + +A +F+  +E+ G +P+
Sbjct: 209 RMNIRSSLYTFNIMINV------------------LCKEGKLKKAKEFIGHMETLGVKPN 250

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++YN ++      GK++    +   M  +GLEP+  TY+  IS LC++G+ E+A  ++ 
Sbjct: 251 VVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLIC 310

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E GL P+A +Y+ LI  YC  G LD A  + D MIS G +  +V YN  + A    G
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
               A  + +++ + G  P+  ++N + +     GD  RA G++ EM+ KGI+P  +TY 
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430

Query: 409 SLISCL-----------------------------------CRDGMVDEAVGLLVDMEST 433
           SLI  L                                   C +G +D A  LL +M++ 
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +  P  I+YN ++ G+C+  ++ E+ ++L  M  +G KP+  +Y  LI G    G   +A
Sbjct: 491 KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDA 550

Query: 494 MELANALVS 502
             + + +++
Sbjct: 551 FRVRDEMMT 559



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 53/389 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  ++  FI  M   G KP+VV    +I       K  +A  + + ++  G EPD +
Sbjct: 228 KEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCY 287

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+ ISG CK  ++E A+ ++ ++   G  P+ VTYN +I   C++G ++ A+   D++
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +      +++TY + I A  +EG+   A  ++ EM                 G C+ G  
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA 407

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV----- 265
            +AF  +  +  +G QP +++Y  L+  L    + +E + L +++   GL P+++     
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 266 ------------------------------TYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
                                         TY+ L+   CR+GK E+A  +L   K +G+
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  SY+ LIS Y K G +  A    D M++ G  P I+ YN ++   CKN   + A E
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + +++   G  P+ S+Y ++  A+ +  D
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEAMETVDD 616



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 149/276 (53%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N+++  L   GK ++ ++ +  M + G++PNVVTY+ +I   C  GK + A  + +  
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K+KGL PD Y+Y+  IS  CK+GRL+ A   +  M+  G +P+ V YN ++  +C  G+ 
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+A    +++   G   ++ +YN    AL+  G    A  MI EM  KG+ PD +T+N L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+  CR G    A GLL +M     +PT+++Y  +I    K  R+ E+  + + + ++G 
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            P+   +  LI+G    G    A +L   + +M  +
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL 493



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 101/218 (46%)

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           D L  A+++        +D L+ AYC+  + + A+E    +   G +P+I   N +L+ F
Sbjct: 132 DELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLF 191

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K      A  ++ ++  +    ++ ++N M + L   G   +A   I  M + G++P+ 
Sbjct: 192 LKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNV 251

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TYN++I   C  G    A  +   M+     P   +YN  I G CK  R+ E+  ++  
Sbjct: 252 VTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICK 311

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           M E G  PN  TY  LI+G    G   +A    + ++S
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 231/450 (51%), Gaps = 19/450 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +++++L     +V +G +PD  M  K I+   +     +A+ +M  +++ G  P VF YN
Sbjct: 162 RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I G CK  +++ A K+ D +  R  +P+ +TYN +I   C  G +E AF + +++  +
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
           N +PT+IT+  L+                   G+C+  M+ +A + +  +E  G  PD  
Sbjct: 282 NVEPTIITFNSLLN------------------GLCRAQMMEEAQRVLEEMEVYGFVPDRF 323

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  L    L  G  +    L  E + +G++    T SIL+++LC++G  E A +VL+  
Sbjct: 324 TYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF 383

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E GL P    ++ +++ YC+ G ++ A   ++ M + G  P+ V YN+++  FC+  N 
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNM 443

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++A +  +K+ + G  PNV +YNT+      S    R   ++ EM  KG++P+ I+Y  L
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+CLC+D  + EA  +L DM      P    YN++I G C   ++ ++      M  +  
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            P   TY +LI G+   G   EA  LA+ +
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEI 593



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 206/441 (46%), Gaps = 19/441 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M  +G  P V      ++     ++    +++  EI+E    PD F Y   I    K   
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A +++  ++  G SP V  YN++IG LC    ++ A K+FD++L     P  ITY  
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           LI                   G CK G + +AF     ++    +P +I++N LL  L  
Sbjct: 258 LID------------------GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCR 299

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
               EE ++++ EM   G  P+  TY+ L     + G  + ++ +   A  KG+    Y+
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYT 359

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
              L++A CK+G ++ A E L   + +G  P  V +NTI+  +C+ G+ ++A    EK+ 
Sbjct: 360 CSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKME 419

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
            VG  PN  +YN++        +   A   I +M+ KG+ P+  TYN+LI    R  + D
Sbjct: 420 AVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFD 479

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               +L +ME    +P VISY  +I   CK   I E+  +L  M  +G  PN   Y +LI
Sbjct: 480 RCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI 539

Query: 482 EGIGYGGWRAEAMELANALVS 502
           +G    G   +A    + +V+
Sbjct: 540 DGSCIAGKLKDAFRFFDEMVA 560



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 245/573 (42%), Gaps = 124/573 (21%)

Query: 35  VKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           ++  QFM  K I+ + + G    ++  +  M   G  P V +   +I    +E++   A 
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++  E+L++   P+   YN LI G+CK  Q+E A  + +R++     P ++T+N ++  L
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYT------------------------------- 180
           C   M+E A +V +++      P   TYT                               
Sbjct: 298 CRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD 357

Query: 181 ----ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRS 219
               IL+ A   EG  +KA ++L +                  G C+ G + +A+  +  
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEK----------------------------- 250
           +E+ G +P+ ++YN L++    M   EE EK                             
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL 477

Query: 251 ------LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
                 ++ EM  +GL+PNV++Y  LI+ LC+D    +A  +L     +G+ P+A  Y+ 
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI   C  G+L  A  F D M++   +P +V YN ++   CK G   +A  +  +++  G
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597

Query: 365 CPPNVSSYNTMFSALWSSGDKIRAL----------------------------GMI---- 392
              +V +YN++ S   S+G+  +AL                            G++    
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK 657

Query: 393 --SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EML   + PD + YN+LI C    G V +A  L   ME+   +P  ++YN +ILG  
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K  R+++   ++  M  +G  P   TY +LI G
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 215/446 (48%), Gaps = 20/446 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  +++   ++  + NG  P  V    ++  + Q    NKA   +E +E  G  P+  
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+  FC+   +E A K + ++  +G  P+V TYN +I       + +  F++ +++
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +   KP VI+Y  LI                    +CK   + +A   +  +  RG  P
Sbjct: 489 EKKGLKPNVISYGCLINC------------------LCKDANILEAEVILGDMVHRGVVP 530

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +   YNML+      GK ++  +   EM++R + P +VTY+ILI+ LC+ GK  +A ++ 
Sbjct: 531 NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLA 590

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL+ D  +Y+ LIS Y   G +  A+E  + M   G  P +  Y+ ++A   K 
Sbjct: 591 SEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKE 650

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G      +I++++  +   P+   YN +       GD  +A  + S M ++GI+PD++TY
Sbjct: 651 GLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTY 709

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI    ++G + +   L+ DM+     P   +Y+I+I+G CK +  + +      MFE
Sbjct: 710 NCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFE 769

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
            G  P+ +    LI G+   G   +A
Sbjct: 770 NGFTPSVSICDNLITGLREEGRSHDA 795



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 27/382 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+K+       +E+   I+ MV  G  P+V     LI  + +    ++  +++E +E
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P+V +Y  LI+  CK   I  A  +L  +  RG  P+   YN++I   C  G ++
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF+ FD+++     PT++TY ILI     +G+  +A  L  E+                
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLI 609

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG----EKLMTEMIS 257
            G    G V +A +   +++  G +P + +Y+ L+      G  +EG    EK+  EM+ 
Sbjct: 610 SGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLI-----AGCGKEGLVLVEKIYQEMLQ 664

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
             L P+ V Y+ LI      G  + A  +  A + +G+ PD  +Y+ LI  + K+GR+  
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
               ++ M   G +P    Y+ ++   CK  + D A   + ++ + G  P+VS  + + +
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784

Query: 378 ALWSSGDKIRALGMISEMLSKG 399
            L   G    A  + SEM  KG
Sbjct: 785 GLREEGRSHDADVICSEMNMKG 806



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF-VRSLESRGCQPDVISYNMLLRTLLN 241
           +Q  + +G+T+ A +L+  M + K      +  + + SL S   +P  +  +MLL     
Sbjct: 67  LQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTPMKP--LFSDMLLSICSE 124

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
                E  +L   M   G+ P+V + ++ + SL    + ED + +     E GL PD + 
Sbjct: 125 SKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFM 184

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y   I A  K G L  AIE +  M   G  P +  YN ++   CK      A ++F+++ 
Sbjct: 185 YGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEML 244

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D    PN  +YNT+       G    A  +   M  + +EP  IT+NSL++ LCR  M++
Sbjct: 245 DRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMME 304

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  +L +ME   F P   +Y  +  G  K   ++ SI +      KG +  + T  +L+
Sbjct: 305 EAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL 364

Query: 482 EGIGYGGWRAEAMEL 496
             +   G   +A E+
Sbjct: 365 NALCKEGNMEKAEEV 379


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 229/457 (50%), Gaps = 25/457 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVF 107
           AG+ D     + +++  G + D +  T L+K    +++++ A+  V+  + + G  P+VF
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +YN L+ G C  N+ + A ++L  +   G    PDVV+Y  +I      G ++ A+  + 
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++L     P V+TY+ +I A       DKAM++L  M                 G C  G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGL+P + TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+      G   +   +L      G+ P+ Y +  LI AY K G++D A+     M   
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKI 386
           G  PD V Y T++   CK+G  + A+  FE++ D    P    YN++  +L  +   DK 
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + L  I EML +GI  D I +NS+I   C++G V E+  L   M     +P +I+Y+ +I
Sbjct: 464 KEL--ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 236/458 (51%), Gaps = 19/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  P+VV  + +I    + +  +KA+ V+  + 
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++ S G  PDVVTYN ++  LC  G   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 367

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  P+   +++L+      GK ++   + ++M  +GL P+ VTY  +I  LC+ G
Sbjct: 368 N----GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++ L+P    Y+ LI + C   + D A E +  M+  G   D + +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  P++ +Y+T+      +G    A  +++ M+S 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+   + E G +   +TY +++ G+       EA+ +
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 227/463 (49%), Gaps = 18/463 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    +A   D+++  + SMV NG  P+      ++  +    +  +A+  ++ + 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EPDV  YN+L+   CK  +   A K+ D +  RG  P++ TY  ++    ++G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
               + D ++R+   P    ++ILI A   +G+ D+AM +  +M                
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK G V  A ++   +      P  I YN L+ +L    KW++ ++L+ EM+ RG+ 
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + + ++ +I S C++G+  ++  +       G+ PD  +Y  LI  YC  G++D A + 
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M+S G  PD V YNT++  +CK    + AL +F ++   G  P++ +YN +   L+ 
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +     A  +   +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    +
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +NI+I    K  R +E+ ++ AA+   G  P+  TY L+ E +
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 17/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P++  Y  LI   C A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++ +  C P V +Y IL++    E ++ +A++LL  M                  + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM----------------PDDG 192

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV+SY  ++      G  ++      EM+ RG+ PNVVTYS +I++LC+    + 
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL +  + G+ P+  +Y+ ++  YC  G+   AI FL  M SDG  PD+V YN+++ 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A ++F+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++   P    Y  LI  +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSL 454



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 3/243 (1%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+ TY ILI S C  G+ +     L    +KG   DA ++ PL+   C D R   A++ 
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 322 -LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSA 378
            L  M   GC+P++ +YN +L   C    + +ALE+ + + D G  CPP+V SY T+ + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
            +  GD  +A G   EML +GI P+ +TY+S+I+ LC+   +D+A+ +L  M      P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +YN I+ G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 499 ALV 501
           ++ 
Sbjct: 329 SMT 331


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 229/483 (47%), Gaps = 31/483 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+FD        MVA G  P+VV    LI    ++    KA R+  E++EK   P V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G C  ++I  A  +   +R+ G  P++ TYN M+   C    ++ A +++ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P V+T+ ILI       +   A K L +M                 G CK G +
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A      +E     PDV +Y++L++ L  + + EE + L+ EM  +G  PN VTY+ L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C++G  E A++V     EKG+ P+  ++  LI  YCK G+++ A+     M+  G 
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIR 387
           LPD+V Y  ++    K+GN  +A  + +++ + G  PNV + + +   L   G   D I+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 388 AL---------GMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                      G  +  L + +  P+ + Y +LI  LC DG + +A     DM  +  RP
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V +  +II G  +   + + + + A + + G  PN + Y +L +G    G+   A+  +
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCS 649

Query: 498 NAL 500
             L
Sbjct: 650 EDL 652



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 30/411 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + A N ++ G  K  + +   KV   + +RG SP+VVTY  +I   C +G    AF++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD+++     PTV+ YTILI+    E +  +A  +   M                 G CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              V +A +  + +   G  P+V+++ +L+  L    +     K + +M S G+ PN+  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C+ G   +A+ +    ++  + PD ++Y  LI   C   R++ A   L  M 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G LP+ V YNT++  +CK GN ++A+E+  ++++ G  PN+ +++T+      +G   
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+G+ +EM+ KG+ PD + Y +LI    +DG   EA  L  +M+     P V + + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 447 LGFCKTRRINESIEVLAA-------------MFEKGCKPNETTYVLLIEGI 484
            G CK  RI+++I++  A             +    C PN   Y  LI+G+
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 23/374 (6%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL RL S  F+P+V  + ++I +    G++E A  V+ ++   +  P        +QA  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPA-------MQACN 162

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           +         +LD  G+ KKG     ++    + +RG  P+V++Y  L+      G + +
Sbjct: 163 M---------VLD--GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EMI + + P VV Y+ILI  LC + +  +A  + R  +  G+ P+ Y+Y+ ++ 
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            YCK   +  A+E    M+ DG LP++V +  ++   CK      A +    ++  G  P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N+  YN +      +G+   AL + SE+    I PD  TY+ LI  LC    ++EA GLL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+   F P  ++YN +I G+CK   + ++IEV + M EKG +PN  T+  LI+G    
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 488 GWRAEAMELANALV 501
           G    AM L   +V
Sbjct: 452 GKMEAAMGLYTEMV 465



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 34/351 (9%)

Query: 30  LLSFDVKETQFMK--LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           + SF V    F+   LI    +AG   E+L     +  +   PDV   + LIK      +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
             +A  +++ ++K G  P+   YN LI G+CK   +E A +V  ++  +G  P+++T++ 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I   C  G +E+A  ++ +++     P V+ YT LI     +G T +A +L  EM    
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM---- 499

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM------------TE 254
                         +  G  P+V + + L+  L   G+  +  KL             T 
Sbjct: 500 --------------QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 255 MISRGL-EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            + R L  PN V Y+ LI  LC DG+   A       +  GL PD ++   +I  + +  
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
            L   +     ++  G +P+   Y  +   + ++G    AL   E LS +G
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIG 656


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 226/461 (49%), Gaps = 17/461 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKF+++   +E     GC P VV    ++    ++ + ++A++  E ++K   P++  Y
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTY 412

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   CKA ++E A  V D ++  G  P+V+T NIM+  LC    ++ A  +F+ L  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C+P  +TY  LI+     G+ D+A KL ++M                    K G    
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +    +   GC PD++  N  +  +   G+ E+G  L  E+ + G  P+  +Y+ILI 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +A ++    KE+G   D  +Y+ +I  +CK G+++ A + L+ M + G  P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   + EA+     M+  +  P  I+Y+I+I G CK 
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R+ N++      M ++G KPN  TY  +I G+   G   EA
Sbjct: 773 RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 215/446 (48%), Gaps = 20/446 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AGK D +  F   M ANG   D V  T +I    +  + N+AV + E +++  + P  +
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN +I G+  A + E A  +L+R R +G  P VV+YN ++  L  +G ++ A K F+++
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +D   P + TY I+I                    +CK G +  A     +++  G  P
Sbjct: 402 KKDAI-PNLSTYNIMIDM------------------LCKAGKLETALVVRDAMKDAGLFP 442

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +VI+ N+++  L    + ++   +   +  +   P+ VTY  LI  L R G+ ++A  + 
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +    P+A  Y  LI  + K GR +   +  + M+  GC PD++  NT +    K 
Sbjct: 503 EQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKA 562

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++   +F+++ ++G  P+  SY  +   L  +G    A  +   M  +G   D   Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N++I   C+ G V++A  LL +M++    PTV++Y  +I G  K  R++E+  +      
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
           KG + N   Y  LI+G G  G   EA
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEA 708



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 178/399 (44%), Gaps = 19/399 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN+L+    +  +     ++L+ +   GF P   T   ++ S      +  AF     +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +   +P    YT LI A      +D  + L  +M                  +  G   
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM------------------QELGYAV 233

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V  +  L+R     G+ +    L+ EM S  LEP+VV Y++ I    + GK + A    
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  GL  D  +Y  +I   CK  RL+ A+E  ++M  +  +P    YNT++  +   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  + A  + E+    GC P+V SYN + S L   G    AL    EM    I P+  TY
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTY 412

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I  LC+ G ++ A+ +   M+     P VI+ NI++   CK +R++++  +   +  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           K C+P+  TY  LIEG+G  G   EA +L   ++  + I
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 174/378 (46%), Gaps = 18/378 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEIL 98
           +  LI+   R G+ DE+    E M+     P+ V+ T LI+ FF+  RK +      E+L
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                PD+   N  +    KA +IE    +   +++ GF PD  +Y I+I  L   G   
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+++F  +    C      Y  +I      G+ +KA +LL+EM                
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K   + +A+      +S+G + +V+ Y+ L+     +G+ +E   +M E++ +GL 
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV T++ L+ +L +  +  +A+   ++ K+   TP+  +Y  LI   CK  + + A  F
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVF 781

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M   G  P++  Y T+++   K GN  +A  +FEK  + G   + + YN +   L +
Sbjct: 782 WQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841

Query: 382 SGDKIRALGMISEMLSKG 399
           +     A  +  E   KG
Sbjct: 842 ANRASDAYRLFEEARLKG 859



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 4/283 (1%)

Query: 214 FQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           F++   L  R  C+    +YN LL  +    K+   E+++ EM   G  P+  T   ++ 
Sbjct: 117 FRWAERLTDRAHCRE---AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           S  +  K  +A   ++  ++    P   +Y  LI A       D  +     M   G   
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++  + T++  F + G  D AL + +++      P+V  YN        +G    A    
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM + G+  D++TY S+I  LC+   ++EAV L   M+  +  P   +YN +I+G+   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            +  ++  +L     KGC P+  +Y  ++  +G  G   EA++
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 226/461 (49%), Gaps = 17/461 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKF+++   +E     GC P VV    ++    ++ + ++A++  E ++K   P++  Y
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTY 412

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   CKA ++E A  V D ++  G  P+V+T NIM+  LC    ++ A  +F+ L  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C+P  +TY  LI+     G+ D+A KL ++M                    K G    
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +    +   GC PD++  N  +  +   G+ E+G  L  E+ + G  P+  +Y+ILI 
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +A ++    KE+G   D  +Y+ +I  +CK G+++ A + L+ M + G  P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   + EA+     M+  +  P  I+Y+I+I G CK 
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R+ N++      M ++G KPN  TY  +I G+   G   EA
Sbjct: 773 RKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 222/480 (46%), Gaps = 17/480 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L + V    F  LI+   R G+ D +L  ++ M +N  +PDVV+    I  F +  K + 
Sbjct: 229 LGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDM 288

Query: 91  AVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A +    ++  G   D   Y ++I   CKA+++  A ++ + +      P    YN MI 
Sbjct: 289 AWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIM 348

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------ 203
                G  E A+ + ++  R  C P+V++Y  ++     +GQ D+A+K  +EM       
Sbjct: 349 GYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPN 408

Query: 204 ----------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +CK G +  A     +++  G  P+VI+ N+++  L    + ++   +  
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            +  +   P+ VTY  LI  L R G+ ++A  +     +    P+A  Y  LI  + K G
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R +   +  + M+  GC PD++  NT +    K G  ++   +F+++ ++G  P+  SY 
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L  +G    A  +   M  +G   D   YN++I   C+ G V++A  LL +M++ 
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              PTV++Y  +I G  K  R++E+  +      KG + N   Y  LI+G G  G   EA
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 178/399 (44%), Gaps = 19/399 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN+L+    +  +     ++L+ +   GF P   T   ++ S      +  AF     +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +   +P    YT LI A      +D  + L  +M                  +  G   
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM------------------QELGYAV 233

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V  +  L+R     G+ +    L+ EM S  LEP+VV Y++ I    + GK + A    
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  GL  D  +Y  +I   CK  RL+ A+E  ++M  +  +P    YNT++  +   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  + A  + E+    GC P+V SYN + S L   G    AL    EM    I P+  TY
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTY 412

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I  LC+ G ++ A+ +   M+     P VI+ NI++   CK +R++++  +   +  
Sbjct: 413 NIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDH 472

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           K C+P+  TY  LIEG+G  G   EA +L   ++  + I
Sbjct: 473 KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI 511



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 174/378 (46%), Gaps = 18/378 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEIL 98
           +  LI+   R G+ DE+    E M+     P+ V+ T LI+ FF+  RK +      E+L
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                PD+   N  +    KA +IE    +   +++ GF PD  +Y I+I  L   G   
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+++F  +    C      Y  +I      G+ +KA +LL+EM                
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K   + +A+      +S+G + +V+ Y+ L+     +G+ +E   +M E++ +GL 
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV T++ L+ +L +  +  +A+   ++ K+   TP+  +Y  LI   CK  + + A  F
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVF 781

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M   G  P++  Y T+++   K GN  +A  +FEK  + G   + + YN +   L +
Sbjct: 782 WQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841

Query: 382 SGDKIRALGMISEMLSKG 399
           +     A  +  E   KG
Sbjct: 842 ANRASDAYRLFEEARLKG 859



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 4/283 (1%)

Query: 214 FQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           F++   L  R  C+    +YN LL  +    K+   E+++ EM   G  P+  T   ++ 
Sbjct: 117 FRWAERLTDRAHCRE---AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           S  +  K  +A   ++  ++    P   +Y  LI A       D  +     M   G   
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++  + T++  F + G  D AL + +++      P+V  YN        +G    A    
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM + G+  D++TY S+I  LC+   ++EAV L   M+  +  P   +YN +I+G+   
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            +  ++  +L     KGC P+  +Y  ++  +G  G   EA++
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 231/457 (50%), Gaps = 19/457 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + ++++   R  K D+SL     MV     P +   ++L+    + +K +  + + E 
Sbjct: 47  SDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106

Query: 98  LEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G P ++   N L++ FC+ +Q+ LA   L ++   G  PD+VT+  ++   C    
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           I  A  +FD+++    +P V+ Y  +I                   G+CK   V  A   
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIID------------------GLCKSKQVDNALDL 208

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +  +E  G +PD ++YN L+  L N G+W++  ++++ M  R + P+V T++ LI +  +
Sbjct: 209 LNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+  +A ++      + L PD  +Y  LI   C   RLD A +   +M+S GC PD+V 
Sbjct: 269 EGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVT 328

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+ ++  +CK+   +  +++F ++S  G   N  +Y  +      +G    A  +   M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMV 388

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P+ ITYN L+  LC +G +++A+ +L DM+ +     +++YNIII G CK   + 
Sbjct: 389 FCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVA 448

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  ++  KG  P+  TY  ++ G+   G R EA
Sbjct: 449 DAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEA 485



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 217/438 (49%), Gaps = 19/438 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
             F +L+    +  K+D  +Y  E M   G   ++  C  L+  F +  + + A+  +  
Sbjct: 82  ADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K G EPD+  + +L++GFC+ ++I  A  + DR+   G+ P+VV YN +I  LC    
Sbjct: 142 MMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +++A  + +++  D  +P  +TY  LI                   G+C  G    A + 
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLIS------------------GLCNSGRWDDATRM 243

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V  +  R   PDV ++N L+   +  G+  E E+L  EMI R L+P++VTYS+LI  LC 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             + ++A  +      KG  PD  +Y  LI+ YCK  +++  ++    M   G + + V 
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++  +C+ G  + A EIF+ +   G PPN+ +YN +   L  +G   +AL ++++M 
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G++ D +TYN +I  +C+ G V +A  L   +      P + +Y  ++LG  K     
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483

Query: 457 ESIEVLAAMFEKGCKPNE 474
           E+  +   M E G  PNE
Sbjct: 484 EADALFRKMKEDGILPNE 501



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 138/271 (50%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  +LR  +   K ++   L   M+     P++  +S L+S++ +  K +  + +    +
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+  +  + + L++ +C+  +L LA+ FL  M+  G  PDIV + ++L  FC+     
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            AL +F+++ ++G  PNV  YNT+   L  S     AL +++ M   GI PD +TYNSLI
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           S LC  G  D+A  ++  M      P V ++N +I    K  RI+E+ E+   M  +   
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY LLI G+       EA ++   +VS
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVS 319



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 19/248 (7%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E        S D     +  LI       + DE+      MV+ GC PDVV  +
Sbjct: 271 RISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYS 330

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI  + + +K    +++  E+ ++    +   Y  LI G+C+A ++ +A ++   +   
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFC 390

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+++TYN+++  LC  G IE A  +   + +      ++TY I+I+           
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIR----------- 439

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  GMCK G V  A+    SL  +G  PD+ +Y  ++  L   G   E + L  +M
Sbjct: 440 -------GMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492

Query: 256 ISRGLEPN 263
              G+ PN
Sbjct: 493 KEDGILPN 500


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 229/457 (50%), Gaps = 25/457 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVF 107
           AG+ D     + +++  G + D +  T L+K    +++++ A+  V+  + + G  P+VF
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +YN L+ G C  N+ + A ++L  +   G    PDVV+Y  +I      G ++ A+  + 
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++L     P V+TY+ +I A       DKAM++L  M                 G C  G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGL+P + TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+      G   +   +L      G+ P+ Y +  LI AY K G++D A+     M   
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKI 386
           G  PD V Y T++   CK+G  + A+  FE++ D    P    YN++  +L  +   DK 
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + L  I EML +GI  D I +NS+I   C++G V E+  L   M     +P +I+Y+ +I
Sbjct: 464 KEL--ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 237/462 (51%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  P+VV  + +I    + +  +KA+ V+  + 
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++ S G  PDVVTYN ++  LC  G   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 367

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  P+   +++L+      GK ++   + ++M  +GL P+ VTY  +I  LC+ G
Sbjct: 368 N----GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++ L+P    Y+ LI + C   + D A E +  M+  G   D + +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  P++ +Y+T+      +G    A  +++ M+S 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+   + E G +   +TY +++ G+       EA+ +   L
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 226/457 (49%), Gaps = 20/457 (4%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGF 116
           +  M   GC P+V     L+K    E +S +A+ +++++   G    PDV +Y  +I+GF
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
            K   ++ A      +  RG  P+VVTY+ +I +LC    ++ A +V   ++++   P  
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRS 219
            TY  ++      GQ  +A+  L +M                  +CK G   +A +   S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  RG +P++ +Y  LL+     G   E   L+  M+  G+ PN   +SILI +  + GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + A+ V    +++GL PD  +Y  +I   CK GR++ A+ + + MI +   P  + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ + C     D+A E+  ++ D G   +   +N++  +    G  I +  +   M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++PD ITY++LI   C  G +DEA  LL  M S   +P  ++YN +I G+CK  R+ +++
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +   M   G  P+  TY ++++G+      A A EL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D+++  + SMV NG  P+      ++  +    +  +A+  ++ +   G EPDV 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+   CK  +   A K+ D +  RG  P++ TY  ++    ++G +     + D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           +R+   P    ++ILI A   +G+ D+AM +  +M                  +CK G V
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A ++   +      P  I YN L+ +L    KW++ ++L+ EM+ RG+  + + ++ +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G+  ++  +       G+ PD  +Y  LI  YC  G++D A + L  M+S G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V YNT++  +CK    + AL +F ++   G  P++ +YN +   L+ +     A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    ++NI+I    
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R +E+ ++ AA+   G  P+  TY L+ E +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 17/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P++  Y  LI   C A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++ +  C P V +Y IL++    E ++ +A++LL  M                  + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM----------------PDDG 192

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV+SY  ++      G  ++      EM+ RG+ PNVVTYS +I++LC+    + 
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL +  + G+ P+  +Y+ ++  YC  G+   AI FL  M SDG  PD+V YN+++ 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A ++F+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++   P    Y  LI  +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSL 454



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 3/242 (1%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+ TY ILI S C  G+ +     L    +KG   DA ++ PL+   C D R   A++ 
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 322 -LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSA 378
            L  M   GC+P++ +YN +L   C    + +ALE+ + + D G  CPP+V SY T+ + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
            +  GD  +A G   EML +GI P+ +TY+S+I+ LC+   +D+A+ +L  M      P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +YN I+ G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 499 AL 500
           ++
Sbjct: 329 SM 330


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 228/457 (49%), Gaps = 25/457 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVF 107
           AG+ D     + +++  G + D +  T L+K    +++++ A+  V+  + + G  P+VF
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +YN L+ G C  N+ + A ++L  +   G    PDVV+Y  +I      G ++ A+  + 
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++L     P V+TY  +I A       DKAM++L  M                 G C  G
Sbjct: 224 EMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGL+P + TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+      G   +   +L      G+ P+ Y +  LI AY K G++D A+     M   
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGDKI 386
           G  PD V Y T++   CK+G  + A+  FE++ D    P    YN++  +L  +   DK 
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + L  I EML +GI  D I +NS+I   C++G V E+  L   M     +P +I+Y+ +I
Sbjct: 464 KEL--ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLI 521

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 236/462 (51%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  P+VV    +I    + +  +KA+ V+  + 
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMV 261

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++ S G  PDVVTYN ++  LC  G   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 367

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  P+   +++L+      GK ++   + ++M  +GL P+ VTY  +I  LC+ G
Sbjct: 368 N----GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++ L+P    Y+ LI + C   + D A E +  M+  G   D + +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  PN+ +Y+T+      +G    A  +++ M+S 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+   + E G +   +TY +++ G+       EA+ +   L
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 226/457 (49%), Gaps = 20/457 (4%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGF 116
           +  M   GC P+V     L+K    E +S +A+ +++++   G    PDV +Y  +I+GF
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
            K   ++ A      +  RG  P+VVTYN +I +LC    ++ A +V   ++++   P  
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRS 219
            TY  ++      GQ  +A+  L +M                  +CK G   +A +   S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +  RG +P++ +Y  LL+     G   E   L+  M+  G+ PN   +SILI +  + GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + A+ V    +++GL PD  +Y  +I   CK GR++ A+ + + MI +   P  + YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ + C     D+A E+  ++ D G   +   +N++  +    G  I +  +   M+  G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++P+ ITY++LI   C  G +DEA  LL  M S   +P  ++YN +I G+CK  R+ +++
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +   M   G  P+  TY ++++G+      A A EL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D+++  + SMV NG  P+      ++  +    +  +A+  ++ +   G EPDV 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+   CK  +   A K+ D +  RG  P++ TY  ++    ++G +     + D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           +R+   P    ++ILI A   +G+ D+AM +  +M                  +CK G V
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A ++   +      P  I YN L+ +L    KW++ ++L+ EM+ RG+  + + ++ +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G+  ++  +       G+ P+  +Y  LI  YC  G++D A + L  M+S G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V YNT++  +CK    + AL +F ++   G  P++ +YN +   L+ +     A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    ++NI+I    
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R +E+ ++ AA+   G  P+  TY L+ E +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 17/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P++  Y  LI   C A +++L    L  +  +GF  D + +  ++  LC+      A   
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++ +  C P V +Y IL++    E ++ +A++LL  M                  + 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM----------------PDDG 192

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV+SY  ++      G  ++      EM+ RG+ PNVVTY+ +I++LC+    + 
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDK 252

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++VL +  + G+ P+  +Y+ ++  YC  G+   AI FL  M SDG  PD+V YN+++ 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A ++F+ ++  G  P +++Y T+     + G  +   G++  M+  GI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++   
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++   P    Y  LI  +
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSL 454



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 40/295 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP+  +Y 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            LI + C  GRLDL                AI F                    L  M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDK 385
            GC+P++ +YN +L   C    + +ALE+ + + D G  CPP+V SY T+ +  +  GD 
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A G   EML +GI P+ +TYNS+I+ LC+   +D+A+ +L  M      P   +YN I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +++
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 227/479 (47%), Gaps = 31/479 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+FD        MVA G  P+VV    LI    ++    KA R+  E++EK   P V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G C  ++I  A  +   +R+ G  P++ TYN M+   C    ++ A +++ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P V+T+ ILI       +   A K L +M                 G CK G +
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A      +E     PDV +Y++L++ L  + + EE + L+ EM  +G  PN VTY+ L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C++G  E A++V     EKG+ P+  ++  LI  YCK G+++ A+     M+  G 
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIR 387
           LPD+V Y  ++    K+GN  +A  + +++ + G  PNV + + +   L   G   D I+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 388 AL---------GMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                      G  +  L + +  P+ + Y +LI  LC DG + +A     DM  +  RP
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            V +  +II G  +   + + + + A + + G  PN + Y +L +G    G+   A+  
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 202/411 (49%), Gaps = 30/411 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + A N ++ G  K  + +   KV   + +RG SP+VVTY  +I   C +G    AF++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD+++     PTV+ YTILI+    E +  +A  +   M                 G CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              V +A +    +   G  P+V+++ +L+  L    +     K + +M S G+ PN+  
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C+ G   +A+ +    ++  + PD ++Y  LI   C   R++ A   L  M 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G LP+ V YNT++  +CK GN ++A+E+  ++++ G  PN+ +++T+      +G   
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+G+ +EM+ KG+ PD + Y +LI    +DG   EA  L  +M+     P V + + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 447 LGFCKTRRINESIEVLAA-------------MFEKGCKPNETTYVLLIEGI 484
            G CK  RI+++I++  A             +    C PN   Y  LI+G+
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 23/374 (6%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL RL S  F+P+V  + ++I +    G++E A  V+ ++   +  P        +QA  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPA-------MQACN 162

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           +         +LD  G+ KKG     ++    + +RG  P+V++Y  L+      G + +
Sbjct: 163 M---------VLD--GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EMI + + P VV Y+ILI  LC + +  +A  + R  +  G+ P+ Y+Y+ ++ 
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            YCK   +  A+E    M+ DG LP++V +  ++   CK      A +    ++  G  P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N+  YN +      +G+   AL + SE+    I PD  TY+ LI  LC    ++EA GLL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+   F P  ++YN +I G+CK   + ++IEV + M EKG +PN  T+  LI+G    
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 488 GWRAEAMELANALV 501
           G    AM L   +V
Sbjct: 452 GKMEAAMGLYTEMV 465



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 159/358 (44%), Gaps = 36/358 (10%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F+  M + G  P++ +   LI  + +    ++A+ +   +EK+   PDVF Y+ LI G C
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC 379

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
             +++E A+ +L  ++ +GF P+ VTYN +I   C  G +E A +V  Q+     +P +I
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           T++ LI      G+ + AM L  EM +                  +G  PDV++Y  L+ 
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVI------------------KGLLPDVVAYTALID 481

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT- 296
                G  +E  +L  EM   GL PNV T S LI  LC+DG+  DA+ +  A      T 
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTG 541

Query: 297 ------------PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
                       P+   Y  LI   C DGR+  A +F   M   G  PD+     I+   
Sbjct: 542 SKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +  +    + +   +  +G  PN S Y  +      SG    AL    E    G++P
Sbjct: 602 FRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQP 655



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 112/512 (21%), Positives = 201/512 (39%), Gaps = 71/512 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AG   E+L     +  +   PDV   + LIK      +  +A  +++ ++K G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   YN LI G+CK   +E A +V  ++  +G  P+++T++ +I   C  G +E+A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            ++ +++     P V+ YT LI     +G T +A +L  EM                 G+
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 205 CKKGMVGQAFQF-------------VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           CK G +  A +                 L+   C P+ + Y  L++ L   G+  +  K 
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
            ++M   GL P+V T  ++I    R     D + +     + G+ P++  Y  L   Y +
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638

Query: 312 DGRLDLAIEFLDYMISDGCLP-DIVN------------------------YNTILAAFCK 346
            G L  A+ F      +G  P D VN                        +++ L AF  
Sbjct: 639 SGYLKSALSF----CGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAF-- 692

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI--RALGMISEMLSKGIEPDE 404
                 +  +      +  PP+          +   GD+   +AL +  +M     +PD 
Sbjct: 693 ---GIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDI 749

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +T    +S     G +D    +   +        +   N +I  + K   I  +      
Sbjct: 750 VTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA----RR 805

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +F+   K + TT+  +I G    G   EA++L
Sbjct: 806 LFDGTQKKDVTTWTSMIVGHALHGQAEEALQL 837



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 113/516 (21%), Positives = 199/516 (38%), Gaps = 89/516 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +AGK + ++     MV  G  PDVV  T LI   F++  + +A R+ + ++
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVL-------------DRLRSRGFSPDVVTYN 145
           + G  P+VF  + LI G CK  +I  A K+              + L     SP+ V Y 
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            +I  LC+ G I  A K F  +     +P V T  ++IQ         +AM L D M   
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF------RAMHLRDVMMLQ 614

Query: 203 --------------------GMCKKGMVGQAFQF----VRSLESRGCQPDVISYNMLLRT 238
                               G  + G +  A  F    V+ L+    +P   SY +  R 
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEP-WGSYTIRSRF 673

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTY---SIL-----------ISSLCRDG--KTED 282
            L +   E+ E   + + + G+   V+ +   +IL           +  + + G  +   
Sbjct: 674 QLCVVT-EKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNK 732

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ + R  +     PD  +    +SA    G LD+      Y+   G   D+   N+++ 
Sbjct: 733 ALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 792

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML------ 396
            + K G    A  +F+         +V+++ +M       G    AL + +EM       
Sbjct: 793 MYSKCGEIGTARRLFDGTQK----KDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRA 848

Query: 397 ----------SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNII 445
                     S  + P+++T+  ++      G+V+E       M E    RP +  +  +
Sbjct: 849 RKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCM 908

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +   C+   + E+ E +  M     +PN   +  L+
Sbjct: 909 VDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL 941



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 15/228 (6%)

Query: 85  ERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           +++ NKA+++   ++    +PD+      +S       +++   +   +R RG   D+  
Sbjct: 727 DQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
            N +I      G I +A ++FD       K  V T+T +I    L GQ ++A++L  EM 
Sbjct: 787 NNSLINMYSKCGEIGTARRLFD----GTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 204 MCKKGMVGQAFQFVRS--LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGL 260
              K    +A +  R+   ES    P+ +++  +L    + G  EEG++    M     L
Sbjct: 843 ETNK----RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSL 898

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            P +  +  ++  LCR G   +A + +     +   P+A  +  L+ A
Sbjct: 899 RPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGA 943



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/442 (19%), Positives = 162/442 (36%), Gaps = 73/442 (16%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
           C P+ VM T LI+    + +  KA +    +   G  PDVF    +I G  +A  +    
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVM 611

Query: 127 KVLDRLRSRGFSPDVVTYNIMIG------------SLCSRGM---------------IES 159
            +   +   G  P+   Y ++              S C  G+               I S
Sbjct: 612 MLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRS 671

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK-GMVGQ------ 212
            F++     +  C  + +T    I + +L       +K      + KK   +GQ      
Sbjct: 672 RFQLCVVTEKKECHSSYLT-AFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRP 730

Query: 213 --AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A Q  R ++    QPD+++  + L    ++G  + GE +   +  RGL+ ++   + L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI---- 326
           I+   + G+   A  +    ++K    D  ++  +I  +   G+ + A++    M     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 327 ------------SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYN 373
                       S   LP+ V +  +L A    G  ++  + F  +  D    P +S + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG-----------MVDE 422
            M   L  +G    A   I +M    + P+ + + +L+      G           +  E
Sbjct: 907 CMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSE 963

Query: 423 AVGLLVDMESTRFRPTVISYNI 444
           A   L+++E +     VI  N+
Sbjct: 964 ARRQLLELEPSHVGDNVIMSNL 985


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 208/399 (52%), Gaps = 20/399 (5%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K  R +E+L +   P+   YN +I+GFC   +++ A  ++  +R RG  +P+  TY  
Sbjct: 501 AGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 560

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G ++ A KVFD++L +   KP  + Y  LI                   G C
Sbjct: 561 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG------------------GYC 602

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A  +   +  RG    V +YN+L+  L   G+  E  +L+ EM  +GL P+V 
Sbjct: 603 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A+++      +G+     +Y  LI A  K G++    +  D  
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ +   +GN D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD +TYN+LIS     G V +A+ +  +M +  F PT+++YN +
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G CK  + +++  ++  M E G  P+++TY+ LIEG+
Sbjct: 843 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 199/394 (50%), Gaps = 22/394 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++      P+ VTYN +I   CSRG +++A  +  ++ 
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ D+A+K+ DEM    KG V               +P
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEV---------------KP 589

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + GK +        M+ RG+   V TY++L+ +L  DG+  +A +++
Sbjct: 590 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 649

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL PD ++Y+ LI+ +CK+G +  A+E  + M   G    +V Y  ++ A  K 
Sbjct: 650 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 709

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +  ++F++    G  P++  YN + ++  +SG+  RA  ++ EM  K I PD++TY
Sbjct: 710 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 769

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G VDEA  L+ +M     +P +++YN +I G+     + +++ +   M  
Sbjct: 770 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 829

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P   TY  LI+G+   G   +A  +   +V
Sbjct: 830 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 174/339 (51%), Gaps = 20/339 (5%)

Query: 49  RAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           + G+ DE++   + M+  G  KP+ VM   LI  +  + K + A+   + ++E+     V
Sbjct: 567 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 626

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN L+       +   A ++++ +  +G +PDV TYNI+I   C  G ++ A ++F+ 
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + R   + TV+TYT LI A   +GQ  +  KL DE               VR    RG +
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA--------------VR----RGIR 728

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD++ YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC  G+ ++A  +
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    E+G+ PD  +Y+ LIS Y   G +  A+   + M++ G  P ++ YN ++   CK
Sbjct: 789 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           NG  D A  + +++ + G  P+ S+Y ++   L +  ++
Sbjct: 849 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 887



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G+  E+    +  V  G +PD+V+   LI         ++A  +M E+ 
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD   YN L+ G C   +++ A K++D +  RG  PD+VTYN +I     +G ++
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ ++++     PT++TY  LIQ                  G+CK G    A   V+
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQ------------------GLCKNGQGDDAENMVK 860

Query: 219 SLESRGCQPDVISYNMLLRTL 239
            +   G  PD  +Y  L+  L
Sbjct: 861 EMVENGITPDDSTYISLIEGL 881



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +  +  P   +++N M   L S+G   RAL    E+L +   P+ +TYN++I+
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIA 527

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-C 470
             C  G V  A+ ++ +M E     P   +Y  +I G+CK  R++E+++V   M  KG  
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 471 KPNETTYVLLIEG 483
           KP    Y  LI G
Sbjct: 588 KPEAVMYNALIGG 600


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 220/450 (48%), Gaps = 21/450 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+L  +  M   GC P+ V    L+       +  +A  +++ + + G E   +
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAY 261

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G+C+  Q++ A+++ + + SRG  P +VTYN ++  LC  G +  A K+ D +
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +  N  P +++Y  LI                   G  + G +G+AF     L  RG  P
Sbjct: 322 VNKNLMPDLVSYNTLIY------------------GYTRLGNIGEAFLLFAELRFRGLVP 363

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V++YN L+  L  MG  +   +L  EMI  G +P+V T++IL+   C+ G    A ++ 
Sbjct: 364 SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELF 423

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +GL PD ++Y   I    K G    A    + M++ G  PD++ YN  +    K 
Sbjct: 424 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 483

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A E+ +K+   G  P+  +Y ++  A   +G   +A  +  EMLSKGI P  +TY
Sbjct: 484 GNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY 543

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             LI      G +  A+    +M      P VI+YN +I G CK R+++++ +    M  
Sbjct: 544 TVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQA 603

Query: 468 KGCKPNETTYVLLI-EGIGYGGWRAEAMEL 496
           KG  PN+ TY +LI E    G W+ EA+ L
Sbjct: 604 KGISPNKYTYTILINENCNLGHWQ-EALRL 632



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 217/439 (49%), Gaps = 22/439 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS--NKAVRVMEILEKYG-EPDVFAY 109
            ++ L     MV+ G  PD+  C ++++   ++R S  + A  V  ++ + G  P V  Y
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLR-LLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++  FCK  +++ A ++L +++  G  P+ VTYN+++  L   G +E A ++  ++LR
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              + +  TY  LI+    +GQ D+A +L +EM                   SRG  P +
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM------------------LSRGAVPTL 295

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN ++  L   G+  +  KL+  M+++ L P++V+Y+ LI    R G   +A  +   
Sbjct: 296 VTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE 355

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + +GL P   +Y+ LI   C+ G LD+A+   D MI  G  PD+  +  ++  FCK GN
Sbjct: 356 LRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGN 415

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A E+F+++ + G  P+  +Y T        GD  +A GM  EML++G  PD ITYN 
Sbjct: 416 LPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNV 475

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
            I  L + G + EA  L+  M      P  ++Y  II        + ++  V   M  KG
Sbjct: 476 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG 535

Query: 470 CKPNETTYVLLIEGIGYGG 488
             P+  TY +LI      G
Sbjct: 536 IFPSVVTYTVLIHSYAVRG 554



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 196/405 (48%), Gaps = 18/405 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L  +V    +  LI+     G+ DE+    E M++ G  P +V    ++    +  + + 
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 91  AVRVMEIL-EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A ++++++  K   PD+ +YN LI G+ +   I  A  +   LR RG  P VVTYN +I 
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            LC  G ++ A ++ D++++    P V T+TIL++     G    A +L DEM       
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G  K G   +AF     + +RG  PD+I+YN+ +  L  +G  +E  +L+
Sbjct: 434 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 493

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M+  GL P+ VTY+ +I +    G    A  V      KG+ P   +Y  LI +Y   
Sbjct: 494 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVR 553

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GRL LAI     M   G  P+++ YN ++   CK    DQA + F ++   G  PN  +Y
Sbjct: 554 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTY 613

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             + +   + G    AL +  +ML + I+PD  T+++L+  L +D
Sbjct: 614 TILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 24/396 (6%)

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-GMIESAFKVFDQLLRDNCKP 174
           + K + +E    V  ++ S+G  PD+   N ++  L  R   I+ A +V++ ++    +P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           TV+TY      TML+               CK+G V +A Q +  ++  GC P+ ++YN+
Sbjct: 189 TVVTYN-----TMLDS-------------FCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  L + G+ E+ ++L+ EM+  GLE +  TY  LI   C  G+ ++A  +      +G
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             P   +Y+ ++   CK GR+  A + LD M++   +PD+V+YNT++  + + GN  +A 
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +F +L   G  P+V +YNT+   L   GD   A+ +  EM+  G +PD  T+  L+   
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G +  A  L  +M +   +P   +Y   I+G  K    +++  +   M  +G  P+ 
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 470

Query: 475 TTYVLLIEGIGYGGWRAEAMELA-----NALVSMHA 505
            TY + I+G+   G   EA EL      N LV  H 
Sbjct: 471 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 506



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 185/372 (49%), Gaps = 21/372 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R  GF    +TY +++  L   G++ SA+ V ++++    +  V+   IL     +  + 
Sbjct: 73  RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132

Query: 193 DKAMK-LLDEMGMCKKGMV------GQAFQFVRSLESR--------------GCQPDVIS 231
               K LL    M  KGM+       +  + +R  +S               G +P V++
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN +L +    GK +E  +L+ +M   G  PN VTY++L++ L   G+ E A ++++   
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             GL   AY+YDPLI  YC+ G+LD A    + M+S G +P +V YNTI+   CK G   
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A ++ + + +    P++ SYNT+       G+   A  + +E+  +G+ P  +TYN+LI
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LCR G +D A+ L  +M      P V ++ I++ GFCK   +  + E+   M  +G +
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432

Query: 472 PNETTYVLLIEG 483
           P+   Y+  I G
Sbjct: 433 PDRFAYITRIVG 444



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 25/274 (9%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPD-VVMCTKLIKKFFQ 84
           P+  + +F +    F KL         FDE       M+  G +PD     T+++ +   
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDE-------MLNRGLQPDRFAYITRIVGELKL 448

Query: 85  ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
              S       E+L +   PD+  YN  I G  K   ++ A++++ ++   G  PD VTY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
             +I +    G +  A  VF ++L     P+V+TYT+LI +  + G+   A+    EM  
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK   + QA++F   ++++G  P+  +Y +L+    N+G W+E
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             +L  +M+ R ++P+  T+S L+  L +D K+ 
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSH 662


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 17/456 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AG+F+ +   ++ +   GC P VV    ++    ++RK ++A+ + E ++K  EP+   Y
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTY 394

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C A ++E A  + D +   G  P+++T NIM+  LC     E A+++F+   +
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +TY  LI     +G  D A +L + M                      G    
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED 514

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +  RGCQPD+   N  +  +   G  E+G  +  ++   G  P+V +YSILI 
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G+  +   +  A K++G   DA +Y+ ++  +CK G+LD A E L+ M      P
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPP 634

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +  Y +I+    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P   +Y+I+I G C+ 
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           ++ N++      M ++G  PN  TY  +I G+   G
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 226/473 (47%), Gaps = 19/473 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F    + +  LI     A + + +L  +  M   G +  V + T L++   +E +   
Sbjct: 176 LKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEG 235

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ ++ E+     EPD+  YN  I  F KA  +++A K    L+S+G  PD V+Y  MI 
Sbjct: 236 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIW 295

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------ 203
            LC  G +  A ++F Q+  +   P    Y  +I      GQ + A KLLD++       
Sbjct: 296 VLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355

Query: 204 -----------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      + KK  V +A     +++ +  +P+  +YN+++  L   GK EE   + 
Sbjct: 356 SVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIR 414

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM   GL PN++T +I++  LC+  K E A ++   A ++G  P++ +Y  LI    K 
Sbjct: 415 DEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKK 474

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G +D A    + M+  G   + V Y +++  F  +G  +   +IF++++  GC P+++  
Sbjct: 475 GNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLL 534

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT    ++ +GD  +   +  ++   G  PD  +Y+ LI  L + G   E   +   M+ 
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 594

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
             F     +YN ++ GFCK+ +++++ EVL  M  K   P   TY  +I+G+ 
Sbjct: 595 QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLA 647



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 37/428 (8%)

Query: 90  KAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           K +  M +L  YG P+  A   L+S   +  +++ A +V+  +R   F P    Y ++IG
Sbjct: 133 KVLEEMSVL-GYGVPNP-ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIG 190

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKG 208
           ++      E A ++  Q+     +  V  +T L++A   EG+ + A+ L+DE+ G C   
Sbjct: 191 AMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC--- 247

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                            +PD++ YN+ +      G  +   K   E+ S+GL+P+ V+Y+
Sbjct: 248 ----------------LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYT 291

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I  LC+ G+  +A ++    + +   P AY+Y+ +I  Y   G+ + A + LD +   
Sbjct: 292 SMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC+P +V++N+IL    K    D+AL +FE +      PN S+YN +   L  +G    A
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEA 410

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM   G+ P+ +T N ++  LC+    + A  +          P  ++Y  +I G
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
             K   ++++  +   M + G   N   Y  LI      G + +           H I  
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG----------HKI-- 518

Query: 509 DTFKRLNR 516
             FK +NR
Sbjct: 519 --FKEMNR 524



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 18/256 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++GK D++   +E M      P V     +I    +  + ++A  + E  +  G E +V 
Sbjct: 613 KSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y++LI GF K  +I+ A  +L+ +  +G +P+V T+N ++ +L     I  A   F  +
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P   TY+ILI       + +KA     EM                 G+ K G +
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A       ++ G  PD  S+N L+  + +  +  E   +  E   +G   NV     L
Sbjct: 793 TDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISL 852

Query: 271 ISSLCRDGKTEDAVDV 286
           + +L +    E A  V
Sbjct: 853 LDALNKAECLEQAAVV 868



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+ DE+   +E M+  G  P+V     L+    +  + N+A+   + ++
Sbjct: 674 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMK 733

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    P+ + Y+ LI+G C+  +   A      ++ +G  P+VVTY  MI  L   G I 
Sbjct: 734 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNIT 793

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--CKKGMVGQAFQF 216
            A  +F++   +   P   ++  LI+      +  +A  + +E  +  C+   V      
Sbjct: 794 DACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN-VKACISL 852

Query: 217 VRSLESRGC--QPDVISYNMLLRTLLNMGKWEEGEKLM 252
           + +L    C  Q  V+ +     T+ +  +W EG  L+
Sbjct: 853 LDALNKAECLEQAAVVGFGE--NTVRHFFQWTEGLDLL 888


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 235/477 (49%), Gaps = 22/477 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK   + G+  ++   ++ M   G  P V     +I  + +  +   A+ +  ++E+ G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD + YN+LI G C   +++ A ++L+   +RGF+P V+T+  +I   C    I+ A 
Sbjct: 350 CNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +V   ++  NCK  +  Y +LI   + + +  +A + L+EM                 G 
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK GMVG A +  + +E  GC P+  +Y  L+  L+   K  +   L+T+M   G+ P V
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y+ LI   C+  + ++A  +    ++ GLTPD  +Y+ L  A CK GR + A  FL  
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-- 586

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +  G +   V Y +++  F K GN D A  + EK+ + GC  ++ +Y+ +  AL     
Sbjct: 587 -VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL ++ +M   G++ + + Y  +IS + ++G  D A  L  +M S+  +P+  +Y +
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            I  +CK  +I E+  ++  M   G  P+  TY + I G G+ G+   A      +V
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 214/502 (42%), Gaps = 72/502 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFA 108
            GK DE+   +   +A G  P V+  T LI  + +  + + A+RV   ++    + D+ A
Sbjct: 366 GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI+   K  +++ A + L+ + + G +P+VV Y  +I   C  GM+ +A +VF  + 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            + C P   TY  LI   + + +  KAM L+ +M                 G CKK    
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFD 545

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            AF+    +E  G  PD  +YN+L   L   G+ EE    +   + +G+    VTY+ L+
Sbjct: 546 NAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLV 602

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
               + G T+ A  ++     +G   D Y+Y  L+ A CK  +L+ A+  LD M   G  
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            +IV Y  I++   K G  D A  +F ++   G  P+ ++Y    S+    G    A  +
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHL 722

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG-------------------------- 425
           I EM   G+ PD +TY+  I+     G +D A                            
Sbjct: 723 IGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782

Query: 426 -------------------------LLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
                                    LL  M      PTV++Y+ II GFCK  R+ E+  
Sbjct: 783 MSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACV 842

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  M  K   PNE  Y +LI+
Sbjct: 843 LLDHMLGKAISPNEEIYTMLIK 864



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 209/458 (45%), Gaps = 25/458 (5%)

Query: 52  KFDESLY---FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +FD + Y       +V  G  PD V    +I  + ++     A R   +L + G + D +
Sbjct: 156 RFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTY 215

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             NAL+ G+C+ + +  A  +L  +   G   +  +Y I+I  L     +  A  +   +
Sbjct: 216 TCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMM 275

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           ++D C   +  YT+LI+    EG+   A  LLDEM                 G CK G +
Sbjct: 276 VQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRM 335

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A      +E  GC PD  +YN L+  L   GK +E E+L+   I+RG  P V+T++ L
Sbjct: 336 KDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNL 394

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C+  + +DA+ V           D  +Y  LI+   K  RL  A E L+ M ++G 
Sbjct: 395 INGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGL 454

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y +I+  +CK G    ALE+F+ +   GC PN  +Y ++   L       +A+ 
Sbjct: 455 APNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMA 514

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +I++M   GI P  I Y +LI   C+    D A  L   ME     P   +YN++    C
Sbjct: 515 LITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           K+ R  E+   L     KG    + TY  L++G    G
Sbjct: 575 KSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAG 609



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 225/499 (45%), Gaps = 37/499 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + G    +L   + M   GC P+      LI    Q++K +KA+ ++  ++
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P V AY  LI G CK ++ + A ++ + +   G +PD   YN++  +LC  G  E
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE 580

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+     L+R     T +TYT L+      G TD A  L+++M                
Sbjct: 581 EAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  + +A   +  +   G + ++++Y +++  ++  GK +  + L  EMIS G +
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY++ ISS C+ G+ E+A  ++   +  G+TPD  +Y   I+     G +D A   
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFST 757

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNG--NA--------------DQALEIFEKLSDVGC 365
           L  M+   C P+   Y  +L  F K    NA              +   ++ E++   G 
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL 817

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P V +Y+++ +    +     A  ++  ML K I P+E  Y  LI C C   +  + V 
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVS 877

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            + DM    F+P + SY+ +I+G C     + +  +   +       NE  + +L +G+ 
Sbjct: 878 FVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL 937

Query: 486 YGGWRAEAMELANALVSMH 504
             G      +L  A+ + H
Sbjct: 938 KAGHVDFCSQLLAAMDNRH 956



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 191/460 (41%), Gaps = 66/460 (14%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K  +++  I  M  +G  P V+  T LI+   ++ + + A R+ E++EK G  PD  AYN
Sbjct: 508 KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567

Query: 111 --------------------------------ALISGFCKANQIELANKVLDRLRSRGFS 138
                                           +L+ GF KA   + A  +++++ + G  
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            D+ TY++++ +LC +  +  A  + DQ+     K  ++ YTI+I   + EG+ D A  L
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            +EM                   CK G + +A   +  +E  G  PDV++Y++ +    +
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGH 747

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG----------------KTEDAVD 285
           MG  +     +  M+    EPN  TY +L+    +                  +      
Sbjct: 748 MGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQ 807

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +L    + GL P   +Y  +I+ +CK  RL+ A   LD+M+     P+   Y  ++   C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCC 867

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
                 + +     + + G  P + SY+ +   L   GD  RA  +  ++L      +E+
Sbjct: 868 DIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEV 927

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +  L   L + G VD    LL  M++   R    SY+++
Sbjct: 928 AWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 174/393 (44%), Gaps = 35/393 (8%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + +  +  L+    +AG  D +   IE MV  GCK D+   + L++   +++K N+A+ +
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +   G + ++ AY  +IS   K  + + A  + + + S G  P   TY + I S C 
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G IE A  +  ++ RD   P V+TY I I                   G    G + +A
Sbjct: 713 IGQIEEAEHLIGEMERDGVTPDVVTYHIFIN------------------GCGHMGYMDRA 754

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNM-----------GKWEEGE-----KLMTEMIS 257
           F  ++ +    C+P+  +Y +LL+  L M           G W   E     +L+  M+ 
Sbjct: 755 FSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMK 814

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            GL P VVTYS +I+  C+  + E+A  +L     K ++P+   Y  LI   C       
Sbjct: 815 HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGK 874

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            + F+  MI  G  P + +Y+ ++   C  G+ D+A  +F  L  +    N  ++  +  
Sbjct: 875 DVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILND 934

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            L  +G       +++ M ++    D  +Y+ L
Sbjct: 935 GLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 39/310 (12%)

Query: 210 VGQAFQFVRSLESRGCQPDVIS---YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           V +A   ++++   G +  V+S   YN+ LR+LL     E   KL + ++  GL P+ VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL---- 322
           Y+ +I + C+ G    A       +E G+  D Y+ + L+  YC+   L  A   L    
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241

Query: 323 -------DY------------------------MISDGCLPDIVNYNTILAAFCKNGNAD 351
                  +Y                        M+ DGC  ++  Y  ++   CK G   
Sbjct: 242 LMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIH 301

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  + +++   G  P+V +YN M      SG    ALG+ + M   G  PD+ TYNSLI
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC  G +DEA  LL    +  F PTVI++  +I G+CK  RI++++ V + M    CK
Sbjct: 362 YGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420

Query: 472 PNETTYVLLI 481
            +   Y +LI
Sbjct: 421 LDLQAYGVLI 430



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++ + SL R   TE    +     ++GL PD  +Y+ +I AYCK G L +A  +   + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G   D    N +L  +C+  +  +A  +   +  +GC  N  SY  +   L+ +    
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL ++  M+  G   +   Y  LI  LC++G + +A GLL +M      P+V +YN +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G+CK+ R+ +++ + A M + GC P++ TY  LI G+  GG   EA EL N  ++
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIA 381


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 214/426 (50%), Gaps = 17/426 (3%)

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R   +L +  +P++  YNA+I+  CK   +  A  ++ ++     SPD  TY  MI   C
Sbjct: 372 RYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC 431

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
            +  ++SA +VF+Q+ ++ C+P  +TY+ LI      G+ ++A  L+ EM          
Sbjct: 432 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +C  G    A++    ++++GC+P+V +Y  L+  L   G  +    L   M
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PN VTY+ LI+ L  + + + A  VL      GL  +  +Y+ +I  YC  G  
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+  ++ M+  G   ++V YNTI+  +C +GN   AL I + + D GC P+  SY  +
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                       A G+ +EM+  G+ P+E+TY +LI   C+D  +D A  LL  M+ +  
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           RP V +YN++I G  K    + + E+   M E+G  PN  TY  +I+G+   G  + A+E
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 496 LANALV 501
           + N ++
Sbjct: 792 MFNKMI 797



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 215/446 (48%), Gaps = 19/446 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     +G+ +E+   I  M+ +G  P    CT  I           A R+   ++
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V+ Y ALISG C +  +++A  +  R+   G  P+ VTYN +I  L     I+
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF V + + R+     ++TY  +I+   + G   KAM +++ M                
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM---------------- 621

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               RG   ++++YN +++   + G      +++  M   G +P+  +Y+ LI   C+  
Sbjct: 622 --LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E A  +     + GL P+  +Y  LI  YCKD +LD A   L++M   GC P++  YN
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K  N   A E+ + + + G  PNV +Y  M   L  +G    AL M ++M+ +
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+ +TY+SLI  L ++G V+EA  L  ++E     P  I+Y  +I  +  + ++  +
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
              L  M + GC+P   TY +LI+G+
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 235/519 (45%), Gaps = 55/519 (10%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            + ++IK     G   +++  + +M+  G   ++V    +IK +     +  A+R+++++ 
Sbjct: 598  YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 657

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
              G +PD ++Y  LI GFCK +++E A  + + +   G  P+ VTY  +I   C    ++
Sbjct: 658  DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            +A  + + + R  C+P V TY +LI                   G+ K+     A +  +
Sbjct: 718  TATSLLEHMKRSGCRPNVQTYNVLIH------------------GLTKQNNFSGAEELCK 759

Query: 219  SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +   G  P+V++Y  ++  L   G      ++  +MI +G  PN++TYS LI +L ++G
Sbjct: 760  VMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEG 819

Query: 279  KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            K E+A ++    +  GL PD  +Y  +I AY   G+++ A  FL  MI  GC P +  Y 
Sbjct: 820  KVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYG 879

Query: 339  TI--------------LAAF------CKNG----NADQALEIFEKLSDVGCPPNVSSYNT 374
             +              LAA       C  G    + D    +  KL+++    +V   N 
Sbjct: 880  VLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNA 939

Query: 375  MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
            + S L ++G    A  ++  M+S+G+ PD+  YNSL+  L R   VD A+G+   M +  
Sbjct: 940  LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 999

Query: 435  FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
                +  Y  +I   C+  R  E+      M  +   P++    +LI+G+   G++   M
Sbjct: 1000 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 1059

Query: 495  ELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
            E  + + +             R  P   +Y  ++  A+K
Sbjct: 1060 EFLHIMET------------RRYMPSFHIYTILAREASK 1086



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 193/435 (44%), Gaps = 45/435 (10%)

Query: 37   ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            E  + +LI    +  K + +      MV +G  P+ V  T LI  + ++ K + A  ++E
Sbjct: 665  EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 724

Query: 97   ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +++ G  P+V  YN LI G  K N    A ++   +   G  P+VVTY  MI  LC  G
Sbjct: 725  HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNG 784

Query: 156  MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
                A ++F++++   C P ++TY+ LI+A   EG+ ++A  L  E              
Sbjct: 785  STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE-------------- 830

Query: 216  FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL- 274
                LE  G  PD I+Y  ++   +  GK E     +  MI  G +P + TY +LI  L 
Sbjct: 831  ----LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 886

Query: 275  -------------------CRDG---KTEDAVDVLRAAKEKGLTP--DAYSYDPLISAYC 310
                               C  G     +DAV V+ +AK   L P       + L+S   
Sbjct: 887  NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVM-SAKLAELDPGLSVQVQNALVSNLS 945

Query: 311  KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
              GR   A E L  MIS G  PD   YN++L +  +  N D A+ +F+ +S  GC  +++
Sbjct: 946  TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 1005

Query: 371  SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
             Y  +  AL     +  A      ML +   PD++    LI  L RDG  D  +  L  M
Sbjct: 1006 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 1065

Query: 431  ESTRFRPTVISYNII 445
            E+ R+ P+   Y I+
Sbjct: 1066 ETRRYMPSFHIYTIL 1080



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 35/312 (11%)

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           K  + +   F+  L   G +  + +Y+ LL  L  +G           M+S G++PN++ 
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ +I++LC+DG   DA  +++   E  ++PD ++Y  +I  +C+   LD A++  + M 
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEI------------------------------ 356
            +GC P+ V Y+T++   C +G  ++A ++                              
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 507

Query: 357 -----FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                F  + + GC PNV +Y  + S L  SG    A+G+   M   G+ P+ +TYN+LI
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + L  +  +  A  +L  M        +++YN +I G+C      +++ V+  M ++G  
Sbjct: 568 NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627

Query: 472 PNETTYVLLIEG 483
            N  TY  +I+G
Sbjct: 628 ANLVTYNTIIKG 639



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 6/218 (2%)

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + GL    ++Y  L+    + G     ++    M+S+G  P+++ YN ++ A CK+GN  
Sbjct: 343 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 402

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  I +K+ +    P+  +Y +M        D   AL + ++M  +G EP+ +TY++LI
Sbjct: 403 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 462

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC  G V+EA  L+ +M      PT  +    I+  C      ++  +   M  KGC+
Sbjct: 463 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 522

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           PN  TY  LI G+   G    A+ L       H +SRD
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGL------FHRMSRD 554


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 229/471 (48%), Gaps = 10/471 (2%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK++++   I  M+  G  PD    +K++       K   A  + E +++ G   DV+ 
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  ++  FCKA  IE A K  + +R  G +P+VVTY  +I +      +  A ++F+ +L
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ-P 227
            + C P ++TY+ LI      GQ +KA ++ + M  C    V     + +  +    + P
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM--CGSKDVPDVDMYFKQYDDDNSERP 638

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V+ Y  LL     + + EE  KL+  M   G EPN + Y  LI  LC+ GK ++A +V 
Sbjct: 639 NVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 698

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E G     Y+Y  LI  Y K  R DLA + L  M+ + C P++V Y  ++   CK 
Sbjct: 699 AEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 758

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A ++ + + + GC PNV +Y  M       G     L ++  M SKG+ P+ +TY
Sbjct: 759 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTY 818

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             LI   C++G +D A  LL +M+ T +      Y  +I GF   +   ES+ +L  + +
Sbjct: 819 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQ 876

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
               P  + Y LL++ +     +A+ +E+A  L+   A    T    + T+
Sbjct: 877 DDTAPFLSLYRLLVDNL----IKAQRLEMALRLLEEVATFSATLVDYSSTY 923



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 227/483 (46%), Gaps = 46/483 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + KLI     A  F+E++ F+  M A  C P+VV  + L+     +++  +  RV+ ++ 
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 100 K---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---- 152
               Y  P +F  N+L+  +C +     A K+L ++   G +P  V YNI+IGS+C    
Sbjct: 365 MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422

Query: 153 --SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
             S  ++E A K + ++L        I  +   +                   +C  G  
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRC------------------LCSAGKY 464

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF  +R +  +G  PD  +Y+ +L  L N  K E    L  EM   GL  +V TY+I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + S C+ G  E A       +E G TP+  +Y  LI AY K  ++  A E  + M+S+GC
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKL-----------------SDVGCPPNVSSYN 373
           LP+IV Y+ ++   CK G  ++A +IFE++                  D    PNV  Y 
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYG 644

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +            A  ++  M  +G EP++I Y++LI  LC+ G +DEA  +  +M   
Sbjct: 645 ALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEH 704

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            F  T+ +Y+ +I  + K +R + + +VL+ M E  C PN   Y  +I+G+   G   EA
Sbjct: 705 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 764

Query: 494 MEL 496
            +L
Sbjct: 765 YKL 767



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 204/426 (47%), Gaps = 42/426 (9%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD   Y  LISG C+A+  E A   L+R+R+    P+VVTY+ ++    ++  +    +V
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            + ++ + C P+   +  L+ A    G    A KLL +M  C                  
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC------------------ 401

Query: 224 GCQPDVISYNMLLRTL------LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           G  P  + YN+L+ ++      L+    E  EK  +EM++ G+  N +  S     LC  
Sbjct: 402 GHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSA 461

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK E A  V+R    +G  PD  +Y  ++   C   +++LA    + M   G + D+  Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTY 521

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             ++ +FCK G  +QA + F ++ +VGC PNV +Y  +  A   +     A  +   MLS
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLL-----------VDMESTRF------RPTVI 440
           +G  P+ +TY++LI   C+ G +++A  +            VDM   ++      RP V+
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVV 641

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            Y  ++ GFCK  R+ E+ ++L AM  +GC+PN+  Y  LI+G+   G   EA E+  A 
Sbjct: 642 IYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KAE 700

Query: 501 VSMHAI 506
           +S H  
Sbjct: 701 MSEHGF 706



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 40/435 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--- 96
           +  LI    +A K   +    E+M++ GC P++V  + LI    +  +  KA ++ E   
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMC 615

Query: 97  ----------ILEKYGE-----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
                       ++Y +     P+V  Y AL+ GFCK +++E A K+LD +   G  P+ 
Sbjct: 616 GSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQ 675

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           + Y+ +I  LC  G ++ A +V  ++       T+ TY+ LI       + D A K+L +
Sbjct: 676 IVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK G   +A++ ++ +E +GCQP+V++Y  ++     +GK
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            E   +L+  M S+G+ PN VTY +LI   C++G  + A ++L   K+      A  Y  
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I  + K+    L +  LD +  D   P +  Y  ++    K    + AL + E+++   
Sbjct: 856 VIEGFNKEFIESLGL--LDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFS 913

Query: 365 CP--PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                  S+YN++  +L  +    +A  + SEM  KG+ P+  T+ SLI  L R+  + E
Sbjct: 914 ATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISE 973

Query: 423 AVGLLVDMESTRFRP 437
           A+ LL+D  S    P
Sbjct: 974 AL-LLLDFISHMVCP 987



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 171/433 (39%), Gaps = 66/433 (15%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNAL+    + +  ++  ++L ++R           N+++   C  G    A +   +L 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P+  TY  LIQA +     D A  +  EM +    M G                 
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDG----------------- 270

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +      +L  +GKW E    +T M +    P+ V Y+ LIS LC     E+A+D L 
Sbjct: 271 -FTLRCYAYSLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +     P+  +Y  L+       +L      L+ M+ +GC P    +N+++ A+C +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR------ALGMISEMLSKGIEP 402
           +   A ++ +K+   G  P    YN +  ++    D +       A    SEML+ G+  
Sbjct: 387 DHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL 446

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP------------------------- 437
           ++I  +S   CLC  G  ++A  ++ +M    F P                         
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLF 506

Query: 438 ----------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V +Y I++  FCK   I ++ +    M E GC PN  TY  LI    + 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI----HA 562

Query: 488 GWRAEAMELANAL 500
             +A+ +  AN L
Sbjct: 563 YLKAKKVSYANEL 575


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 219/446 (49%), Gaps = 21/446 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +AG   ++    +    NGC  D+   T ++    + +K  +AV +ME + 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P +  YNAL++G CK  ++E A  +L ++   G +PDVVTY  +I  L  +    
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A+K+F ++         + YT LI+                  G+ + G + QA    +
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIR------------------GLLQAGKIPQASSVYK 163

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++ S+GC PDV++ + ++  L   G+     ++   M +RGL PN V YS LI  LC+  
Sbjct: 164 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K + A+++L   K+   TPD  +Y+ LI   CK G +  A  F D M+  GC PD+  YN
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYN 283

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +++ FCK GN D A  +F+ +S   C PNV +Y T+ S L       +A      M  +
Sbjct: 284 ILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD   Y+SL+  LC+ G ++    L  +ME +    +  +   +I   CK  R++E+
Sbjct: 344 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEA 402

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           + +  A+ ++G  P+   Y  +I  +
Sbjct: 403 VSLFNAIRKEG-MPHPYAYNSIISAL 427



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 182/380 (47%), Gaps = 18/380 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           ++ LI+G  KA  +  A+ +     + G + D+ TY  ++  L     I+ A  + +++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C PT+ TY  L+                   G+CK G + +A   +R +   GC PD
Sbjct: 62  ANGCTPTIATYNALLN------------------GLCKMGRLEEAIDLLRKIVDNGCTPD 103

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  L+  L    +  E  KL  EM SRGL  + V Y+ LI  L + GK   A  V +
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYK 163

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G  PD  +   +I   CK GR+  A+     M + G  P+ V Y+ ++   CK  
Sbjct: 164 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D ALE+  ++    C P+  +YN +   L  SGD   A     EML  G +PD  TYN
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYN 283

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LIS  C+ G  D A G+  DM S+R  P V++Y  +I G CK R++ ++      M E+
Sbjct: 284 ILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343

Query: 469 GCKPNETTYVLLIEGIGYGG 488
           GC P+   Y  L++G+   G
Sbjct: 344 GCPPDSFVYSSLVDGLCKSG 363



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 174/368 (47%), Gaps = 26/368 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G+ +E++  +  +V NGC PDVV  T LI    ++++S +A ++ + +   G   D  
Sbjct: 81  KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTV 140

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI G  +A +I  A+ V   + S+G  PDVVT + MI  LC  G I +A ++F  +
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P  + Y+ LI       + D A+++L +M                 G+CK G V
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A  F   +   GC+PDV +YN+L+      G  +    +  +M S    PNVVTY  L
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS LC+  +   A    +  KE+G  PD++ Y  L+   CK G+L+      D M   G 
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG- 379

Query: 331 LPDIVNYNT---ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
              + N  T   ++   CK    D+A+ +F  +   G  P+  +YN++ SAL  SG    
Sbjct: 380 ---VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNE 435

Query: 388 ALGMISEM 395
              +  EM
Sbjct: 436 GQAVYQEM 443



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 20/295 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   +AGK  ++    ++M + GC PDVV  + +I    +  +   AVR+ + +E
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 201

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+ALI G CKA +++ A ++L +++    +PD +TYNI+I  LC  G + 
Sbjct: 202 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVA 261

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A   FD++L   CKP V TY ILI      G TD A  + D+M                
Sbjct: 262 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLI 321

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  + +A  + + ++ RGC PD   Y+ L+  L   GK E G  L  EM   G+ 
Sbjct: 322 SGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV- 380

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            N  T + LI  LC+  + ++AV +  A +++G+ P  Y+Y+ +ISA  K G+++
Sbjct: 381 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 434



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 142/263 (53%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++++L+  L+  G   +   L  E  + G   ++ TY+ ++  L ++ K ++AV ++   
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              G TP   +Y+ L++  CK GRL+ AI+ L  ++ +GC PD+V Y +++    K   +
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +A ++F++++  G   +   Y  +   L  +G   +A  +   M S+G  PD +T +++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+ G +  AV +   ME+    P  + Y+ +I G CK R+++ ++E+LA M +  C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 471 KPNETTYVLLIEGIGYGGWRAEA 493
            P+  TY +LI+G+   G  A A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAA 263



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 109/269 (40%), Gaps = 30/269 (11%)

Query: 7   CINPKSNERVRVSSSAETR---PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C   +    VR+  S E R   PN         E  +  LI    +A K D +L  +  M
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPN---------EVVYSALIHGLCKARKMDCALEMLAQM 235

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQI 122
               C PD +    LI    +      A     E+LE   +PDV+ YN LISGFCKA   
Sbjct: 236 KKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 295

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A  V D + S   SP+VVTY  +I  LC R  +  A   +  +    C P    Y+ L
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSL 355

Query: 183 IQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
           +      G+ +    L DEM                 +CK   V +A     ++   G  
Sbjct: 356 VDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-M 414

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           P   +YN ++  L+  GK  EG+ +  EM
Sbjct: 415 PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 92/196 (46%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           ++  LI+   K G L  A        ++GC  DI  Y TI+    KN    +A+ + EK+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +  GC P +++YN + + L   G    A+ ++ +++  G  PD +TY SLI  L +    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  L  +M S       + Y  +I G  +  +I ++  V   M  +GC P+  T   +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 481 IEGIGYGGWRAEAMEL 496
           I+G+   G    A+ +
Sbjct: 181 IDGLCKAGRIGAAVRI 196



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 71/132 (53%)

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +++ + + L  +G  I+A  +  E  + G   D  TY +++  L ++  + EAV L+  +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
            +    PT+ +YN ++ G CK  R+ E+I++L  + + GC P+  TY  LI+G+G     
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 491 AEAMELANALVS 502
            EA +L   + S
Sbjct: 121 FEAYKLFKEMAS 132



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 81/171 (47%)

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            ++ ++    K G   QA  + ++ +  GC  ++ +Y T+   L  +     A+ ++ ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            + G  P   TYN+L++ LC+ G ++EA+ LL  +      P V++Y  +I G  K +R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            E+ ++   M  +G   +   Y  LI G+   G   +A  +   + S   +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 171


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 247/485 (50%), Gaps = 25/485 (5%)

Query: 39  QFMKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           Q   ++ RS  A G  D ++   +S+      PD +  + L+    ++ + + A+ ++ E
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRG 155
           +     +PDV  YNAL+ G  KA + E   +V D+L +  G  P++ TYN+M+  LC  G
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             +   +V+++++ +N +P VITY ILI      G  D A ++  E+             
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+ G V +A++F  S    G + ++ +YN++++ L + G  +E  +L  +++ +
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEK 396

Query: 259 GLE--PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +   P+ VT+  LI  LC++G    A  +   A+  G   D +SY  +I+  C  GRL 
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++  + M  DGC P+   YN +++ FC+      A+ I+ K++D GC P V +YNT+ 
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L  +     A  +  EM+  G  PD  TY SLI  L  D  +D+A+ +   +     +
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTYVLLIEGIGYGGWRAEAME 495
             V+ +NI+I G C   +++E++ V + M E K C PN  TY  L++G+   G+  +A  
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 496 LANAL 500
           L  ++
Sbjct: 637 LWTSI 641



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 211/423 (49%), Gaps = 25/423 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G+F E     E MVAN  +PDV+    LI    +    + A RV  EI++     D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSP--DVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           N+L+ GFC+A +++ A K  D   S GF+   ++ TYNIMI  L   GM++ A +++D L
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWD---SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +D  C P  +T+  LI      G  +KA  + +E                  G+C  G 
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    ++  GC+P+   YN L+     + +  +  ++ ++M   G  P V+TY+ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  LC+  K ++A  V R   E G TPD  +Y  LI     D ++D A+     ++  G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRA 388
              D++ +N ++   C  G  D+AL +F  + +   CPPN+ +YNT+   L+ +G   +A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             + + +   G+EPD I+YN+ I  LC    + E + LL ++ S    PTVI++NI++  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 449 FCK 451
             K
Sbjct: 695 VIK 697



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 217/421 (51%), Gaps = 24/421 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSLCSRGMIES 159
           P + ++NAL+  F +A +   A+     L    F    +P++ TYNI++ SLC+RG ++ 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------MCKKGMVG 211
           A  +FD L R    P  ITY+ L+     + + D A+ LLDEM         +C   ++G
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236

Query: 212 QAFQ----------FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             F+          + + ++  G +P++ +YN++L  L   G+++E  ++   M++  L+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+TY ILI  LCR G  + A  V     + GL  DA  Y+ L+  +C+ GR+  A +F
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALW 380
            D     G L ++  YN ++     +G  D+A+E+++ L  DV C P+  ++ T+   L 
Sbjct: 357 WDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G   +A  +  E    G + D  +Y+S+I+ LC  G + +AV +   M+    +P   
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            YN +I GFC+  R ++++ + + M + GC P   TY  LI+G+       EA  +A  +
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 501 V 501
           V
Sbjct: 536 V 536



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 9/299 (3%)

Query: 209 MVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----ISRGLEPN 263
           M   A    R+L S  GC P + S+N LL   +   ++ + +     +      R + PN
Sbjct: 98  MPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPN 157

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + TY+I++ SLC  G  + AV +  + + + + PD  +Y  L+    K  RLD A++ LD
Sbjct: 158 LQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLD 217

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            M      PD+V YN +L    K G  ++ + +++KL  D G  PN+++YN M   L   
Sbjct: 218 EMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF 277

Query: 383 GDKIRALGMISE-MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           G + + +G + E M++  ++PD ITY  LI  LCR G VD A  +  ++  T        
Sbjct: 278 G-RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           YN ++ GFC+  R+ E+ +   +    G + N  TY ++I+G+   G   EA+EL + L
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL 394



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 18/268 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  +++   E M  +GCKP+  +   LI  F Q  +++ AVR+   +   G  P V  Y
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI G CKA + + A+ V   +   GF+PD+ TY  +I  L S   I+ A  ++ Q+L 
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY 572

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              K  V+ + ILI      G+ D+A+ +  +M                  E + C P++
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK-----------------EKKNCPPNL 615

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+  L   G  ++   L T +   GLEP++++Y+  I  LC   +  + + +L  
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDL 317
              +G+ P   +++ L+ A  K G + +
Sbjct: 676 VLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 5/179 (2%)

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG----CPPNVSSYNTMFSALWSSGD 384
           GC P I ++N +L AF +      A   F  LS         PN+ +YN +  +L + GD
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA+ +   +  + + PD ITY++L+  L +   +D A+ LL +M  +R +P V+ YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 445 IILGFCKTRRINESIEVLAAMF-EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++ G  K     + + V   +  + G +PN  TY ++++G+   G   E  E+   +V+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 232/433 (53%), Gaps = 20/433 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +F +++ F+         P VV    ++ ++ +   ++ A     ++ KYG  PD ++YN
Sbjct: 165 RFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYN 224

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G   A  +E A ++ + +  +G  PD+VTY I+       G++  A ++  ++L D
Sbjct: 225 ILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTD 284

Query: 171 -NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              KP ++TYT+LI                   G C+ G + +A +  R L S G Q +V
Sbjct: 285 EGLKPDLVTYTVLI------------------CGHCQMGNIEEALRLRRDLLSSGFQLNV 326

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           I Y++LL +L   G+ +E  +L+ EM +  L+P++VTYSILI  LC+ GK + A+ + + 
Sbjct: 327 ILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                + P+++++  ++   C+ G L  A  + D +I     PD+  YN ++  + K G+
Sbjct: 387 MCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGD 446

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A+ ++++L D    P++ ++N++      +   + A  ++  +   G+EP  +TY +
Sbjct: 447 VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT 506

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L++  C +G +++   LL++M      PTV++Y ++I G CK R++ ES+++L  M  KG
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 470 CKPNETTYVLLIE 482
             P++ TY  +I+
Sbjct: 567 LAPDQITYNTIIQ 579



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 21/447 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR--VMEILEK 100
           LI     AG  +E+L     M   G +PD+V   K++ K F         R  + ++L  
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMV-TYKIVAKGFHLLGLMSGAREIIQKMLTD 284

Query: 101 YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            G +PD+  Y  LI G C+   IE A ++   L S GF  +V+ Y++++ SLC RG ++ 
Sbjct: 285 EGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDE 344

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A ++  ++  +N +P ++TY+ILI     +G+  +A++L  EM                 
Sbjct: 345 ALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C+KGM+  A  +  SL     +PDV  YN+++   + +G  EE  +L   +  + + P
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++VT++ LI   C++ K  +A  +L + K  GL P A +Y  L++AYC++G ++   E L
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M      P +V Y  ++   CK    ++++++ E +   G  P+  +YNT+      +
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            D  +A  ++ +ML   +EP   TYN LI  LCR G V++A  +LV ++      T ++Y
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKG 469
             +I   C       +++V   M EKG
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQMVEKG 671



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 19/422 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+ DE+L  +  M AN  +PD+V  + LI    ++ K  +A+++  E+      P+ F
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A++ ++ G C+   +  A    D L      PDV  YNIMI      G +E A +++ +L
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P+++T+  LI                   G CK   V +A + + S++  G +P
Sbjct: 458 RDKAITPSIVTFNSLI------------------YGFCKNRKVVEARRLLESIKLHGLEP 499

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             ++Y  L+      G   +  +L+ EM  + +EP VVTY+++I  LC+  K E++V +L
Sbjct: 500 SAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLL 559

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              + KGL PD  +Y+ +I  +CK   +  A E LD M+     P    YN ++   C+ 
Sbjct: 560 EDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRY 619

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ + A  +   L D        +Y TM  A    GD  RA+ +  +M+ KG E     Y
Sbjct: 620 GDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDY 679

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           +++I+ LC+  +++EA      M S    P    + +++  F +   ++   E+LA M +
Sbjct: 680 SAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIK 739

Query: 468 KG 469
            G
Sbjct: 740 FG 741



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 20/351 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNAL 112
           D  +YF +S++ +  +PDV +   +I  + +     +AVR+ + L +K   P +  +N+L
Sbjct: 414 DARMYF-DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I GFCK  ++  A ++L+ ++  G  P  VTY  ++ + C  G I    ++  ++   + 
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +PTV+TYT++I+                  G+CK+  + ++ Q +  + ++G  PD I+Y
Sbjct: 533 EPTVVTYTVVIK------------------GLCKQRKLEESVQLLEDMRAKGLAPDQITY 574

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N +++         +  +L+ +M+   LEP   TY++LI  LCR G  EDA  VL + ++
Sbjct: 575 NTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQD 634

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           + +     +Y  +I A+C  G    A++    M+  G    I +Y+ ++   CK    ++
Sbjct: 635 RNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINE 694

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           A   F  +   G  P+   +  M +A   +G       +++ M+  G+  D
Sbjct: 695 AKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 21/386 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R R F    +  + M+    +  M+  A  V  ++   N +P++ TY  L+        T
Sbjct: 75  RKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLR---HT 131

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           D    + +++                 G+C +     A  F+R  + +   P V+S+N +
Sbjct: 132 DIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTI 191

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +     +G  +  +     M+  G+ P+  +Y+ILI  L   G  E+A+++    +++GL
Sbjct: 192 MSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGL 251

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQAL 354
            PD  +Y  +   +   G +  A E +  M++D G  PD+V Y  ++   C+ GN ++AL
Sbjct: 252 QPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEAL 311

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +   L   G   NV  Y+ + S+L   G    AL ++ EM +  ++PD +TY+ LI  L
Sbjct: 312 RLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGL 371

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G V +A+ L  +M   R  P   +++ I+ G C+   ++++     ++     +P+ 
Sbjct: 372 CKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDV 431

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
           T Y ++I+G    G   EA+ L   L
Sbjct: 432 TLYNIMIDGYVKLGDVEEAVRLYKRL 457



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 39/253 (15%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ +M  + L P++ TY+ L+ +L     T+   DV    K+ G    A +   ++   C
Sbjct: 105 VLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLC 161

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
              R   A+ FL         P +V++NTI++ +CK G           L+DV       
Sbjct: 162 GQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLG-----------LADVA-----K 205

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           S+  M                   ML  GI PD  +YN LI  L   G ++EA+ L  DM
Sbjct: 206 SFFCM-------------------MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDM 246

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKPNETTYVLLIEGIGYGGW 489
           E    +P +++Y I+  GF     ++ + E++  M  ++G KP+  TY +LI G    G 
Sbjct: 247 EKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGN 306

Query: 490 RAEAMELANALVS 502
             EA+ L   L+S
Sbjct: 307 IEEALRLRRDLLS 319



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P I  YN++L       + D   +++  + D G P +  + + +   L        A+  
Sbjct: 116 PSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 172

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + +   K   P  +++N+++S  C+ G+ D A      M      P   SYNI+I G   
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
              + E++E+   M ++G +P+  TY ++ +G    G  + A E+   +++   +  D
Sbjct: 233 AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPD 290


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 210/406 (51%), Gaps = 20/406 (4%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K  R +E+L +   P+   YN +I+GFC   +++ A  ++  +R RG  +P+  TY  
Sbjct: 496 AGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 555

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G ++ A KVFD++L +   KP  + Y  LI                   G C
Sbjct: 556 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG------------------GYC 597

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A  +   +  RG    V +YN+L+  L   G+  E  +L+ EM  +GL P+V 
Sbjct: 598 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A+++      +G+     +Y  LI A  K G++    +  D  
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ +   +GN D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD +TYN+LIS     G V +A+ +  +M +  F PT+++YN +
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           I G CK  + +++  ++  M E G  P+++TY+ LIEG+     RA
Sbjct: 838 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 883



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 199/394 (50%), Gaps = 22/394 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++      P+ VTYN +I   CSRG +++A  +  ++ 
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 541

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ D+A+K+ DEM    KG V               +P
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEV---------------KP 584

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + GK +        M+ RG+   V TY++L+ +L  DG+  +A +++
Sbjct: 585 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 644

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL PD ++Y+ LI+ +CK+G +  A+E  + M   G    +V Y  ++ A  K 
Sbjct: 645 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 704

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +  ++F++    G  P++  YN + ++  +SG+  RA  ++ EM  K I PD++TY
Sbjct: 705 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 764

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G VDEA  L+ +M     +P +++YN +I G+     + +++ +   M  
Sbjct: 765 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 824

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P   TY  LI+G+   G   +A  +   +V
Sbjct: 825 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 174/339 (51%), Gaps = 20/339 (5%)

Query: 49  RAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDV 106
           + G+ DE++   + M+  G  KP+ VM   LI  +  + K + A+   + ++E+     V
Sbjct: 562 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 621

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN L+       +   A ++++ +  +G +PDV TYNI+I   C  G ++ A ++F+ 
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           + R   + TV+TYT LI A   +GQ  +  KL DE               VR    RG +
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA--------------VR----RGIR 723

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD++ YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC  G+ ++A  +
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    E+G+ PD  +Y+ LIS Y   G +  A+   + M++ G  P ++ YN ++   CK
Sbjct: 784 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           NG  D A  + +++ + G  P+ S+Y ++   L +  ++
Sbjct: 844 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 882



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G+  E+    +  V  G +PD+V+   LI         ++A  +M E+ 
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   PD   YN L+ G C   +++ A K++D +  RG  PD+VTYN +I     +G ++
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ ++++     PT++TY  LIQ                  G+CK G    A   V+
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQ------------------GLCKNGQGDDAENMVK 855

Query: 219 SLESRGCQPDVISYNMLLRTL 239
            +   G  PD  +Y  L+  L
Sbjct: 856 EMVENGITPDDSTYISLIEGL 876



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +  +  P   +++N M   L S+G   RAL    E+L +   P+ +TYN++I+
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIA 522

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-C 470
             C  G V  A+ ++ +M E     P   +Y  +I G+CK  R++E+++V   M  KG  
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 471 KPNETTYVLLIEG 483
           KP    Y  LI G
Sbjct: 583 KPEAVMYNALIGG 595


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 228/475 (48%), Gaps = 8/475 (1%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFA 108
           AGKF+++   I  M++ G  PD    +K+I       K + A  + E ++  +  PDVF 
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI  FCK   ++ A K  D +   G +P+VVTY  +I +      + SA ++F+ +L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P V+TYT LI      GQ +KA ++   M       +     + +  +     P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPN 635

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +Y  L+  L    K +E   L+  M   G EPN + Y  LI   C+ GK ++A  V  
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E+G  P+ Y+Y  LI    KD RLDLA++ L  M+ + C P+++ Y  ++   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A  +   + + GC PNV +Y  M      +G   + L ++ +M +KG  P+ +TY 
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G++D+A  LL +M+ T +   +  Y  +I GF   R    S+ +L  + E 
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAEN 873

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL---VSMHAISRDTFKRLNRTFPL 520
              P    Y +LI+     G    A+EL   +    S  A  +D +  L  +  L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSL 928



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 216/515 (41%), Gaps = 78/515 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI++  R G ++ +L  +  +   G KP  +    L++ F +  + + A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D +     +   CKA +   A  ++++     F  D V Y  MI  LC   + E A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               ++   +C P V+TY IL+   + + Q  +  ++L  M                   
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLL---------------------------- 236
           C+ G    A++ ++ +   GCQP  + YN+L+                            
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 237 -------------RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
                        R L   GK+E+   ++ EM+S+G  P+  TYS +I  LC   K ++A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +    K   + PD ++Y  LI ++CK G L  A ++ D M+ DGC P++V Y  ++ A
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K      A E+FE +   GC PNV +Y  +      SG   +A  + + M      PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619

Query: 404 E----------------ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
                             TY +L+  LC+   V EA  LL  M      P  I Y+ +I 
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           GFCK  +++E+  V   M E+G  PN  TY  LI+
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 203/464 (43%), Gaps = 40/464 (8%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+K  +    N A+  +  L+  G +P    YNAL+  F +A++++ A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F+ D  T    +  LC  G    A  + +   ++  K   + YT +I             
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMIS------------ 307

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+  +  +A  F+  + S  C P+V++Y +LL   L   +    +++++ MI
Sbjct: 308 ------GLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL- 315
           + G  P+   ++ LI + CR G    A  +L+   + G  P    Y+ LI   C + +L 
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 316 -----DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
                +LA +    M+    + + VN + +    C  G  ++A  I  ++   G  P+ S
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+ +   L ++     A  +  EM S  + PD  TY  LI   C+ G++ +A     +M
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P V++Y  +I  + K R+++ + E+   M  +GC PN  TY  LI+G    G  
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601

Query: 491 AEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATKD 534
            +A ++   +            R N   P +D+Y +I     +D
Sbjct: 602 EKACQIYARM------------RGNADIPDVDMYFKIDDGNIRD 633



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 30/382 (7%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
           N++I   C  G+   A +   +L     KP+ +TY  L++  +   + D A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                           +CK G   +A   +   E +    D + Y  ++  L     +EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
               ++ M S    PNVVTY IL+    R  +      +L     +G  P    ++ LI 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN--ADQALEIFEK----LS 361
           AYC+ G    A + L  M   GC P  V YN ++   C N    +   LE+ EK    + 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D     N  + + +   L  +G   +A  +I EM+SKG  PD  TY+ +I  LC    VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A  L  +M+S    P V +Y I+I  FCK   + ++ +    M   GC PN  TY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 482 EGIGYGGWRAEAMELANALVSM 503
                   +A  M  AN L  M
Sbjct: 558 HAY----LKARKMSSANELFEM 575



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 23/295 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + GK DE+      M   G  P+V   + LI + F++++ + A++V+  +LE  
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y  +I G CK  + + A +++  +  +G  P+VVTY  MI      G ++   
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++  Q+    C P  +TY +LI      G  D A +LLDEM            Q      
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-----------QTYWPKH 845

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +  +  +N     ++++G       L+ E+      P +  Y ILI S C+ G+ E
Sbjct: 846 MAGYRKVIEGFNR--EFIISLG-------LLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 282 DAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            A+++ +  ++       D   Y  LI +     ++D A E    MI  G +P++
Sbjct: 897 LALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 130/261 (49%), Gaps = 22/261 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+  + D +L  +  M+ N C P+V++ T++I    +  K+++A R+M ++E
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y A+I GF KA +++   +++ ++ ++G +P+ VTY ++I   C+ G+++
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A ++ D++ +      +  Y  +I+    E     ++ LLDE+                
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILI 886

Query: 204 --MCKKGMVGQAFQFVRSLES--RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              CK G +  A +  + + S       D   Y+ L+ +L    K ++  +L  +MI RG
Sbjct: 887 DSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 260 LEPNVVTYSILISSLCRDGKT 280
             P +  +  L+  L R  +T
Sbjct: 947 GIPELSIFFYLVKGLIRINRT 967



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 35/264 (13%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ LL  L   G     E+ + E+     E      ++LI   CR+G    A++ L   K
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----------GCLP--------- 332
           + G  P   +Y+ L+  + +  RLD A   +   +SD          GC           
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAY-LVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 333 --------------DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                         D V Y  +++  C+    ++A++   ++    C PNV +Y  +   
Sbjct: 284 REALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
                   R   ++S M+++G  P    +NSLI   CR G    A  LL  M     +P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 439 VISYNIIILGFCKTRRINESIEVL 462
            + YNI+I G C   ++  S++VL
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVL 426


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 231/432 (53%), Gaps = 23/432 (5%)

Query: 58  YFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALIS 114
           +++    AN  G +P+++    +IK   +  + ++AV    E+  K   PDVF Y+ L++
Sbjct: 182 FYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN 241

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G CK  +++ A  +LD +++ G  P+ VT+N++I +L   G +  A K+ D +    C P
Sbjct: 242 GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP 301

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
             +TY  LI    L+G+ DKA+ LL++M                   S  C P+ ++Y  
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKALSLLEKM------------------VSSKCVPNQVTYGT 343

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++  L+   + E+G  ++  M  RG + N   YS LIS L ++GK+E+AV + +   EKG
Sbjct: 344 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 403

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             P+   Y   I   C+D + D A + L  M+S G LP+   Y++++  F K G++ +A+
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +++++       NV   + + + L  SG    AL + + ML +G++PD + Y+S+I  L
Sbjct: 464 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523

Query: 415 CRDGMVDEAVGLLVDME--STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           C  G VD+ + L  +M+    + RP V++YNI+    C+   +  +I++L +M ++GC P
Sbjct: 524 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583

Query: 473 NETTYVLLIEGI 484
           +  T  + +E +
Sbjct: 584 DSLTCNIFLETL 595



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 22/399 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI--MIGSLCSRGMIES-AFKVF 164
            +  LI  +  + +    ++VLDR++  G    V+T  I  +I   C +  +   A   F
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILIFKACGKAHLPGEAVNFF 147

Query: 165 DQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            ++  D +CK TV ++  ++   + EG    A K                +  V    S+
Sbjct: 148 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF---------------YLHVFGANSK 192

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G QP++++YN++++ L  +G+ +       EM  +   P+V TYS L++ LC++ + ++A
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V +L   + +G  P+  +++ LI A  K+G L  A + +D M   GC+P+ V YNT++  
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G  D+AL + EK+    C PN  +Y T+ + L         + ++  M  +G + +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E  Y+SLIS L ++G  + AV L  +M     +P V+ Y   I G C+  + +E+ ++L 
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  KG  PN  TY  L++G    G   +A+ +   ++S
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMS 471



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 184/410 (44%), Gaps = 35/410 (8%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           +S +A+   N  L      E  +  LI      GK D++L  +E MV++ C P+ V    
Sbjct: 284 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 343

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    ++R++   V ++  +E+ G+  + + Y++LISG  K  + E A ++   +  +G
Sbjct: 344 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 403

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+VV Y   I  LC     + A  +  ++L     P   TY+ L++    +G + KA+
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            +  EM                   S+  + +V+  ++LL  L   G+  E   + T M+
Sbjct: 464 LVWKEM------------------MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML 505

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGR 314
             GL+P+VV YS +I  LC  G  +  + +      +E    PD  +Y+ L +A C+   
Sbjct: 506 GEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDN 565

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  AI+ L+ M+ +GC PD +  N  L    +  N  Q   +F               + 
Sbjct: 566 LTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF--------------LDE 611

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +   L     K+ AL ++ EML + + P+  T++ +I   C+   + E +
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 41/290 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI   F+ GK + ++   + M   GCKP+VV+    I    ++ K ++A  ++ 
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+L K   P+ F Y++L+ GF K    + A  V   + S+    +VV  ++++  LC  G
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A  V+  +L +  KP V+ Y+ +I+     G  DK +KL  EM             
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL----------------- 239
                  +C++  + +A   + S+   GC PD ++ N+ L TL                 
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 612

Query: 240 ----LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
               L   +     +++ EM+ R L P   T+S +I   C+  +  + +D
Sbjct: 613 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 235/504 (46%), Gaps = 19/504 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  +F+  L  I+ M+     P     + L++   +  K  +A+ +++ + ++G  P++F
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI   CK    + A  + DR+   G  P+ VTY+I+I   C RG +++A     ++
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    KP+V  Y  LI      G    A  L+ EM                 G C KG +
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G  P + ++  LL  L   G   +  KL TEM    ++PN VTY+++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C +G    A + L    EKG+ PD YSY PLI   C  G+   A  F+D +    C
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             + + Y  +L  FC+ G  ++AL + + +   G   ++  Y  +        D+   LG
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  +G++PD++ Y S+I    + G   EA G+   M +    P  ++Y  +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG-GWRAEAMELANALVSMHAISRD 509
           K   +NE+  + + M      PN+ TY   ++ +  G G   +A+EL NA++     +  
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTA 788

Query: 510 TFKRLNRTFPLLDVYKEISHLATK 533
           T+  L R F      +E S L T+
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITR 812



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 223/478 (46%), Gaps = 20/478 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    R GK D +L F+  M+  G KP V     LI    +    + A  +M E++ K 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP V  Y +L+ G+C   +I  A ++   +  +G  P + T+  ++  L   G+I  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+F ++   N KP  +TY ++I+    EG   KA + L+EM                 G+
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G   +A  FV  L    C+ + I Y  LL      GK EE   +  +M  RG++ ++
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDL 647

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y +LI    +    +  + +L+   ++GL PD   Y  +I A  K G    A    D 
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS-G 383
           MI++GC+P+ V Y  ++   CK G  ++A  +  K+      PN  +Y      L    G
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVG 767

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           D  +A+ + + +L KG+  +  TYN LI   CR G ++EA  L+  M      P  I+Y 
Sbjct: 768 DMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYT 826

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +I   C+   + ++IE+  +M EKG +P+   Y  LI G    G   +A EL N ++
Sbjct: 827 TMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 217/446 (48%), Gaps = 19/446 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
            F  ++   + M+  G +PDV + T +I+   + +  ++A  ++  +E  G + ++  YN
Sbjct: 207 HFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYN 266

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G CK  ++  A  +   L  +   PDVVTY  ++  LC     E   ++ D++LR 
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL 326

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P+    + L++                  G+ K+G V +A   V+ +   G  P++ 
Sbjct: 327 RFSPSEAAVSSLVE------------------GLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            YN L+ +L     ++E E L   M   GL PN VTYSILI   CR GK + A+  L   
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            + GL P  Y Y+ LI+ +CK G +  A   +  MI+    P +V Y +++  +C  G  
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++AL ++ +++  G  P++ ++ T+ S L+ +G    A+ + +EM    ++P+ +TYN +
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I   C +G + +A   L +M      P   SY  +I G C T + +E+   +  + +  C
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           + NE  Y  L+ G    G   EA+ +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSV 634



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 215/436 (49%), Gaps = 21/436 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           LI+ + + R+    V V +++       P+V   +AL+ G  K     LA ++ D + + 
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PDV  Y  +I SLC    +  A ++  Q+    C   ++ Y +LI            
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID----------- 270

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+CKK  V +A    + L  +  +PDV++Y  L+  L  + ++E G +++ EM
Sbjct: 271 -------GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEM 323

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +     P+    S L+  L + GK E+A+++++   E G++P+ + Y+ LI + CK    
Sbjct: 324 LRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A    D M   G  P+ V Y+ ++  FC+ G  D AL    ++ D+G  P+V  YN++
Sbjct: 384 DEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSL 443

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            +     GD   A  +++EM++K +EP  +TY SL+   C  G +++A+ L  +M     
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P++ ++  ++ G  +   I +++++   M E   KPN  TY ++IEG    G  ++A E
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563

Query: 496 LANALVSMHAISRDTF 511
             N ++    I  DT+
Sbjct: 564 FLNEMIE-KGIVPDTY 578



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 53/415 (12%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           GK +++L     M   G  P +   T L+   F+      AV++  E+ E   +P+   Y
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I G+C+   +  A + L+ +  +G  PD  +Y  +I  LC  G    A    D L +
Sbjct: 546 NVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--------CKKGMVGQAFQ------ 215
            NC+   I YT L+     EG+ ++A+ +  +MG+        C   ++  + +      
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKV 665

Query: 216 ---FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
               ++ +  RG +PD + Y  ++      G ++E   +   MI+ G  PN VTY+ +I+
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 273 SLCRDGKTEDA----------------------VDVL-------------RAAKEKGLTP 297
            LC+ G   +A                      +D+L               A  KGL  
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLA 785

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI  +C+ GR++ A E +  MI DG  PD + Y T+++  C+  +  +A+E++
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
             +++ G  P+  +YNT+      +G+  +A  + +EML +G++P+  T  + IS
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 143/350 (40%), Gaps = 54/350 (15%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H  + ++ E  +  L+    R GK +E+L   + M   G   D+V               
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV--------------- 648

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
                               Y  LI G  K    ++   +L  +  RG  PD V Y  MI
Sbjct: 649 -------------------CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +    G  + AF ++D ++ + C P  +TYT +I                   G+CK G
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN------------------GLCKAG 731

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTY 267
            V +A      +      P+ ++Y   L  L   +G  ++  +L   ++ +GL  N  TY
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATY 790

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI   CR G+ E+A +++      G++PD  +Y  +IS  C+   +  AIE  + M  
Sbjct: 791 NMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTE 850

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            G  PD V YNT++   C  G   +A E+  ++   G  PN  +  T  S
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 29/240 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           +  +I    + G F E+    + M+  GC P+ V  T +I    +    N+A +   ++ 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744

Query: 99  EKYGEPDVFAYNALISGFCKA-----NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
                P+   Y   +    K        +EL N +L     +G   +  TYN++I   C 
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-----KGLLANTATYNMLIRGFCR 799

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           +G +E A ++  +++ D   P  ITYT +I                    +C++  V +A
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISE------------------LCRRNDVKKA 841

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +   S+  +G +PD ++YN L+      G+  +  +L  EM+ +GL+PN  T    IS+
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 231/432 (53%), Gaps = 23/432 (5%)

Query: 58  YFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALIS 114
           +++    AN  G +P+++    +IK   +  + ++AV    E+  K   PDVF Y+ L++
Sbjct: 158 FYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN 217

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G CK  +++ A  +LD +++ G  P+ VT+N++I +L   G +  A K+ D +    C P
Sbjct: 218 GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP 277

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
             +TY  LI    L+G+ DKA+ LL++M                   S  C P+ ++Y  
Sbjct: 278 NEVTYNTLIHGLCLKGKLDKALSLLEKM------------------VSSKCVPNQVTYGT 319

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++  L+   + E+G  ++  M  RG + N   YS LIS L ++GK+E+AV + +   EKG
Sbjct: 320 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 379

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             P+   Y   I   C+D + D A + L  M+S G LP+   Y++++  F K G++ +A+
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +++++       NV   + + + L  SG    AL + + ML +G++PD + Y+S+I  L
Sbjct: 440 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499

Query: 415 CRDGMVDEAVGLLVDME--STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           C  G VD+ + L  +M+    + RP V++YNI+    C+   +  +I++L +M ++GC P
Sbjct: 500 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559

Query: 473 NETTYVLLIEGI 484
           +  T  + +E +
Sbjct: 560 DSLTCNIFLETL 571



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 22/399 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI--MIGSLCSRGMIES-AFKVF 164
            +  LI  +  + +    ++VLDR++  G    V+T  I  +I   C +  +   A   F
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILIFKACGKAHLPGEAVNFF 123

Query: 165 DQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            ++  D +CK TV ++  ++   + EG    A K                +  V    S+
Sbjct: 124 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF---------------YLHVFGANSK 168

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G QP++++YN++++ L  +G+ +       EM  +   P+V TYS L++ LC++ + ++A
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V +L   + +G  P+  +++ LI A  K+G L  A + +D M   GC+P+ V YNT++  
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G  D+AL + EK+    C PN  +Y T+ + L         + ++  M  +G + +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E  Y+SLIS L ++G  + AV L  +M     +P V+ Y   I G C+  + +E+ ++L 
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  KG  PN  TY  L++G    G   +A+ +   ++S
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMS 447



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 184/410 (44%), Gaps = 35/410 (8%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           +S +A+   N  L      E  +  LI      GK D++L  +E MV++ C P+ V    
Sbjct: 260 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 319

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    ++R++   V ++  +E+ G+  + + Y++LISG  K  + E A ++   +  +G
Sbjct: 320 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 379

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+VV Y   I  LC     + A  +  ++L     P   TY+ L++    +G + KA+
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            +  EM                   S+  + +V+  ++LL  L   G+  E   + T M+
Sbjct: 440 LVWKEM------------------MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHML 481

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGR 314
             GL+P+VV YS +I  LC  G  +  + +      +E    PD  +Y+ L +A C+   
Sbjct: 482 GEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDN 541

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  AI+ L+ M+ +GC PD +  N  L    +  N  Q   +F               + 
Sbjct: 542 LTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF--------------LDE 587

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +   L     K+ AL ++ EML + + P+  T++ +I   C+   + E +
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 41/290 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI   F+ GK + ++   + M   GCKP+VV+    I    ++ K ++A  ++ 
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+L K   P+ F Y++L+ GF K    + A  V   + S+    +VV  ++++  LC  G
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A  V+  +L +  KP V+ Y+ +I+     G  DK +KL  EM             
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL----------------- 239
                  +C++  + +A   + S+   GC PD ++ N+ L TL                 
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 588

Query: 240 ----LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
               L   +     +++ EM+ R L P   T+S +I   C+  +  + +D
Sbjct: 589 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 228/475 (48%), Gaps = 8/475 (1%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFA 108
           AGKF+++   I  M++ G  PD    +K+I       K + A  + E ++  +  PDVF 
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI  FCK   ++ A K  D +   G +P+VVTY  +I +      + SA ++F+ +L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P V+TYT LI      GQ +KA ++   M       +     + +  +     P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPN 635

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +Y  L+  L    K +E   L+  M   G EPN + Y  LI   C+ GK ++A  V  
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E+G  P+ Y+Y  LI    KD RLDLA++ L  M+ + C P+++ Y  ++   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A  +   + + GC PNV +Y  M      +G   + L ++ +M +KG  P+ +TY 
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G++D+A  LL +M+ T +   +  Y  +I GF   R    S+ +L  + E 
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAEN 873

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL---VSMHAISRDTFKRLNRTFPL 520
              P    Y +LI+     G    A+EL   +    S  A  +D +  L  +  L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSL 928



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 216/515 (41%), Gaps = 78/515 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI++  R G ++ +L  +  +   G KP  +    L++ F +  + + A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D +     +   CKA +   A  ++++     F  D V Y  MI  LC   + E A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               ++   +C P V+TY IL+   + + Q  +  ++L  M                   
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLL---------------------------- 236
           C+ G    A++ ++ +   GCQP  + YN+L+                            
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 237 -------------RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
                        R L   GK+E+   ++ EM+S+G  P+  TYS +I  LC   K ++A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +    K   + PD ++Y  LI ++CK G L  A ++ D M+ DGC P++V Y  ++ A
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K      A E+FE +   GC PNV +Y  +      SG   +A  + + M      PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619

Query: 404 E----------------ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
                             TY +L+  LC+   V EA  LL  M      P  I Y+ +I 
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           GFCK  +++E+  V   M E+G  PN  TY  LI+
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 203/464 (43%), Gaps = 40/464 (8%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+K  +    N A+  +  L+  G +P    YNAL+  F +A++++ A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F+ D  T    +  LC  G    A  + +   ++  K   + YT +I             
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMIS------------ 307

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+  +  +A  F+  + S  C P+V++Y +LL   L   +    +++++ MI
Sbjct: 308 ------GLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL- 315
           + G  P+   ++ LI + CR G    A  +L+   + G  P    Y+ LI   C + +L 
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 316 -----DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
                +LA +    M+    + + VN + +    C  G  ++A  I  ++   G  P+ S
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+ +   L ++     A  +  EM S  + PD  TY  LI   C+ G++ +A     +M
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P V++Y  +I  + K R+++ + E+   M  +GC PN  TY  LI+G    G  
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601

Query: 491 AEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATKD 534
            +A ++   +            R N   P +D+Y +I     +D
Sbjct: 602 EKACQIYARM------------RGNADIPDVDMYFKIDDGNIRD 633



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 30/382 (7%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
           N++I   C  G+   A +   +L     KP+ +TY  L++  +   + D A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                           +CK G   +A   +   E +    D + Y  ++  L     +EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
               ++ M S    PNVVTY IL+    R  +      +L     +G  P    ++ LI 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN--ADQALEIFEK----LS 361
           AYC+ G    A + L  M   GC P  V YN ++   C N    +   LE+ EK    + 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D     N  + + +   L  +G   +A  +I EM+SKG  PD  TY+ +I  LC    VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A  L  +M+S    P V +Y I+I  FCK   + ++ +    M   GC PN  TY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 482 EGIGYGGWRAEAMELANALVSM 503
                   +A  M  AN L  M
Sbjct: 558 HAY----LKARKMSSANELFEM 575



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + GK DE+      M   G  P+V   + LI + F++++ + A++V+  +LE  
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y  +I G CK  + + A +++  +  +G  P+VVTY  MI      G ++   
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++  Q+    C P  +TY +LI      G  D A +LLDEM            Q      
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-----------QTYWPKH 845

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +  +  +N     ++++G       L+ E+      P +  Y ILI S C+ G+ E
Sbjct: 846 MAGYRKVIEGFNR--EFIISLG-------LLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 282 DAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            A+++ +  ++       D   Y  LI +     ++D A E    MI  G +P++  +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGC 365
           ++    +    ++AL+    LSD  C
Sbjct: 957 LVKGLIRINRWEEALQ----LSDCIC 978



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 134/267 (50%), Gaps = 22/267 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI R F+  + D +L  +  M+ N C P+V++ T++I    +  K+++A R+M ++E
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y A+I GF KA +++   +++ ++ ++G +P+ VTY ++I   C+ G+++
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A ++ D++ +      +  Y  +I+    E     ++ LLDE+                
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILI 886

Query: 204 --MCKKGMVGQAFQFVRSLES--RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              CK G +  A +  + + S       D   Y+ L+ +L    K ++  +L  +MI RG
Sbjct: 887 DSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDV 286
             P +  +  L+  L R  + E+A+ +
Sbjct: 947 GIPELSIFFYLVKGLIRINRWEEALQL 973



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 35/264 (13%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ LL  L   G     E+ + E+     E      ++LI   CR+G    A++ L   K
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----------GCLP--------- 332
           + G  P   +Y+ L+  + +  RLD A   +   +SD          GC           
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAY-LVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 333 --------------DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                         D V Y  +++  C+    ++A++   ++    C PNV +Y  +   
Sbjct: 284 REALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
                   R   ++S M+++G  P    +NSLI   CR G    A  LL  M     +P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 439 VISYNIIILGFCKTRRINESIEVL 462
            + YNI+I G C   ++  S++VL
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVL 426


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 219/474 (46%), Gaps = 48/474 (10%)

Query: 51  GKFDESLYFIESMVANGCKPD-VVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVF-- 107
           G+ D++   + +M    C PD V  CT L           KA RV E +  +G+ ++   
Sbjct: 226 GQVDKARELLRAMPDEECAPDEVSYCTVL-------DGLCKAGRVEEAVRLFGDRELPSS 278

Query: 108 -----------AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                       YN +I G C+ ++I+ A ++ +++  R  SPD  +Y I+I  L   G 
Sbjct: 279 SSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGK 338

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A  +F +LL     P+ + YT LI    +    D A +L  +M              
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-------------- 384

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 RGC P  ++YN+++      G  EE   L+ +MI  G  P+VVTY+ ++  LC+
Sbjct: 385 ----NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD---------GRLDLAIEFLDYMIS 327
             + E+A+ +    +  G TP+  S++ +I   C+          G+LD A   L  M  
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           DG +PD+V Y+T+++  C     D A  + E +    C P V + NT+   L  +G    
Sbjct: 501 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 560

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  ++  M+S G  PD +TYN+L+   CR G  + A  LL DM +    P V++Y  ++ 
Sbjct: 561 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G CK  R+ E+  V A M   GC PN  TY  LI G    G     ++L   +V
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 674



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 224/473 (47%), Gaps = 33/473 (6%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE++   E M      PD      LI    +  K N A  + + L   G  P   AY 
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +LI G C AN  + A ++   +  RG  P  VTYN+MI + C RGM+E A  +  +++ D
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK------- 206
              P V+TY  ++       + ++A+ L +EM                 G+C+       
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 207 --KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
             +G + +AF+ ++ +   G  PDV++Y+ L+  L ++ + ++   L+ +M+ R  +P V
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT + LI  LC+ G+ ++A +VL A    G +PD  +Y+ L+  +C+ G+ + A E L  
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M++ G  P++V Y  +++  CK     +A  +F ++   GC PN+ +Y  +     S+G 
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD----MESTRFRPTVI 440
               L +  EM+  GI PD + Y +L + LC+ G    A+ +L +    + S  +   V 
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV- 721

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            Y   + G  +  ++  ++  +  M   G  P       L+ G+   G   EA
Sbjct: 722 -YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 773



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 33/419 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI     A  FD++      M   GC P  V    +I    +     +A  ++ +++
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL------- 151
           E    PDV  YN ++ G CK++++E A  + + +   G +P+  ++N +I  L       
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 152 --CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C RG ++ AF++  ++  D   P V+TY+ LI       + D A  LL++M       
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G+CK G + +A + + ++ S G  PDV++YN L+      G+ E   +L+
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           ++M++RGL PNVVTY+ L+S LC+  +  +A  V    K  G  P+ ++Y  LI  +C  
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF----EKLSDVGCPPN 368
           G++D  ++    M+  G  PD V Y T+ A  CK+G + +ALEI     E L        
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 720

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           V  Y      L  +G    ALG + +M+  G  P      SL++ LC+ G   EA  +L
Sbjct: 721 V--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 777



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 217/464 (46%), Gaps = 62/464 (13%)

Query: 83  FQERKSNKAVR--VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
             +R+  +AV+  V  ++++   PD F +  ++ G CKA +++ A  V+D +RSR   P 
Sbjct: 54  LSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPY 113

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-----------CKPTVITYTILIQATMLE 189
             T + +   LC RG +E AF++ + +   N           CK   +   + +  TM E
Sbjct: 114 FATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 190 --------------------GQTDKAMKLLDE--------------MGMCKKGMVGQAFQ 215
                               G+ D+A+++  E               G C +G V +A +
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE------MISRGLEPNVVTYSI 269
            +R++    C PD +SY  +L  L   G+ EE  +L  +        S    P++  Y+I
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC++ + ++AV +     E+ ++PD++SY  LI    K G+L+ A      ++  G
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V Y +++   C   + D A E+F  ++  GCPP+  +YN M  A    G    A 
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +I +M+  G  PD +TYN+++  LC+   V+EA+ L  +ME     P   S+N IILG 
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473

Query: 450 CKTRRI---------NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           C+  +I         +E+  +L  M + G  P+  TY  LI G+
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 211/457 (46%), Gaps = 22/457 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           M   G  P  ++ T +I+ +    ++ +AV++  ++E+   P    YN LI    K  + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E   K++  +  RG  PD  T+  ++  LC  G ++ A  V D++      P   T + L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 183 IQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
                L G  ++A +LL+ M              +CK   V  A +  R++  +      
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            S + +L  L++ G+ +E  ++  E      EP +VT ++L+   C  G+ + A ++LRA
Sbjct: 181 GSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAI------EFLDYMISDGCLPDIVNYNTILAA 343
             ++   PD  SY  ++   CK GR++ A+      E      S    P +  YN ++  
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C+N   D+A+++FEK+++    P+  SY  +   L  +G    A  +  ++L  G+ P 
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            + Y SLI  LC     D+A  L  DM      P+ ++YN++I   CK   + E+ +++ 
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M E G  P+  TY  +++G+       EA+ L N +
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 192/402 (47%), Gaps = 42/402 (10%)

Query: 13  NERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV 72
           NE  R+  +   R +  ++    ++++  +  +R    GK DE+   ++ M  +G  PDV
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR----GKLDEAFRLLKRMTDDGHVPDV 507

Query: 73  VMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
           V  + LI       + + A  ++E ++++  +P V   N LI G CKA +I+ A +VLD 
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + S G SPDVVTYN ++   C  G  E A ++   ++     P V+TYT L+        
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS------- 620

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G+CK   + +A      ++S GC P++ +Y  L+    + G+ + G KL
Sbjct: 621 -----------GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 669

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS---YDPLISA 308
             EM+  G+ P+ V Y  L + LC+ G++  A+++LR  +E  L  +A+    Y   +  
Sbjct: 670 FGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES-LRSEAWGDEVYRFAVDG 728

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
             + G++++A+ F+  M+  G LP      +++A  CK+G   +A  + E++ D+     
Sbjct: 729 LLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA---- 784

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
                      +    + +A   + EM+ KG E ++     L
Sbjct: 785 -----------YGGKARGKAAKFVEEMVGKGYEIEDAVLGPL 815



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 179/439 (40%), Gaps = 67/439 (15%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    + ++I G+C   +   A K+   L     SP    YN++I SL  R   E+  K+
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKM 66

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              ++   C P   T+T ++                   G+CK G + +A   +  + SR
Sbjct: 67  VQVMVDRGCFPDSFTFTTIL------------------CGLCKAGKMDEAELVMDEMRSR 108

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              P   + + L   L   G  E   +L+  M       N   Y+I++ +LC+  + +DA
Sbjct: 109 MIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVALCKAARVDDA 164

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++ R   EK +   A S D ++      GR+D A++       + CL   V  N +L  
Sbjct: 165 LELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEG 221

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG-------------------- 383
           FC  G  D+A E+   + D  C P+  SY T+   L  +G                    
Sbjct: 222 FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSS 281

Query: 384 --------------------DKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                               D+I  A+ M  +M  + + PD  +Y  LI  L + G +++
Sbjct: 282 SSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLND 341

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  L   +  +   P+ ++Y  +I G C     +++ E+ A M  +GC P+  TY ++I+
Sbjct: 342 ARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID 401

Query: 483 GIGYGGWRAEAMELANALV 501
                G   EA +L   ++
Sbjct: 402 ASCKRGMLEEACDLIKKMI 420


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK S R  +FD++   +  M   G  PDV     LI    +    + A+++  E+ E+ 
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF K   I  A+++ +RL +     P++ +YN+MI  LC  G  + +
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           F+++ ++ ++     + TY+ LI      G  D A ++  EM                 G
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 309

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             + G + +  +  + +E  GC+  V+SYN+L+R L    K +E   +   +  +    +
Sbjct: 310 YLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 368

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +TY +L+  LC++G    A+ +L  A+      D ++Y  +I+  C++GRLD     LD
Sbjct: 369 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 428

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   GC P+    N ++  F +    + AL  F  +   GC P V +YNT+ + L  + 
Sbjct: 429 QMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  ++ EML KG +P+ ITY+ L++ LC+   +D A+ L        F+P V  +N
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 548

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           III G C + ++ +++++ + M ++ C PN  T+  L+EG 
Sbjct: 549 IIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 209/437 (47%), Gaps = 25/437 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P +     L+    +  K ++A       E  G  P++  YN LI   C+  Q + A
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L+ +  +GFSPDV +Y  +I SL   G +  A K+FD++      P V  Y ILI  
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID- 202

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                            G  KKG +  A + + R L+     P++ SYN+++  L   GK
Sbjct: 203 -----------------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 245

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           ++E  ++   M       ++ TYS LI  LC  G  + A  V +   E G++PD   Y+ 
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++ Y + GR++  +E    M  +GC   +V+YN ++    +N   D+A+ I+E L +  
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  +  +Y  +   L  +G   +AL ++ E  +   + D   Y+S+I+ LCR+G +DE  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G+L  M     +P     N +I GF +  ++ +++     M  KGC P   TY  LI G+
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484

Query: 485 GYGGWRAEAMELANALV 501
                +AE    A ALV
Sbjct: 485 S----KAERFSEAYALV 497



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 233/476 (48%), Gaps = 20/476 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     + K+DE+  F       G  P++     LIK   ++++ +KA  ++  + 
Sbjct: 92  YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 151

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDVF+Y  LI+   K   +  A K+ D +  RG +PDV  YNI+I     +G I 
Sbjct: 152 GQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 211

Query: 159 SAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +A +++++LL+  +  P + +Y ++I      G+ D++ ++   M               
Sbjct: 212 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 271

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G +  A +  + +   G  PDV+ YN +L   L  G+ EE  +L   M   G 
Sbjct: 272 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 331

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
              VV+Y+ILI  L  + K ++A+ +     EK    D+ +Y  L+   CK+G L+ A+ 
Sbjct: 332 R-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 390

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+   +     D   Y++++   C+ G  D+   + ++++  GC PN    N + +   
Sbjct: 391 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFV 450

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     AL     M+SKG  P  +TYN+LI+ L +     EA  L+ +M    ++P +I
Sbjct: 451 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +Y++++ G C+ ++++ ++ +     EKG KP+   + ++I G+   G   +A++L
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 566



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 209/435 (48%), Gaps = 19/435 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + GKFDES      M  N    D+   + LI         + A RV  E+ E    PDV 
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++G+ +A +IE   ++   +   G    VV+YNI+I  L     ++ A  +++ L
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELL 360

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              +C    +TY +L+      G  +KA+ +L+E                  G+C++G +
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +    +  +   GC+P+    N ++   +   K E+  +    M+S+G  P VVTY+ L
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 480

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ L +  +  +A  +++   +KG  P+  +Y  L++  C+  +LD+A+      +  G 
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 540

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+  +N I+   C +G  + AL+++ ++    C PN+ ++NT+    +   D  RA  
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   +L  G++PD I+YN  +  LC    + +AVG L D       PT I++NI++ G+ 
Sbjct: 601 IWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660

Query: 451 KTRRINESIEVLAAM 465
             +   E + V A+M
Sbjct: 661 ALKGYMEPVFVPASM 675



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 38/328 (11%)

Query: 206 KKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           K  M  QA   F R  E  GCQP + SYN LL  L+   KW+E E       + GL PN+
Sbjct: 65  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 124

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ILI   CR  + + A ++L     +G +PD +SY  LI++  K+G +  A++  D 
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVSSYNTMFSAL---- 379
           M   G  PD+  YN ++  F K G+   A EI+E+ L      PN+ SYN M + L    
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 244

Query: 380 --------W-----------------------SSGDKIRALGMISEMLSKGIEPDEITYN 408
                   W                        SG+   A  +  EM   G+ PD + YN
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++++   R G ++E + L   ME    R TV+SYNI+I G  +  +++E+I +   + EK
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEK 363

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            C  +  TY +L+ G+   G+  +A+ +
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKALSI 391



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    R G+ DE    ++ M  +GCKP+  +C  +I  F +  K   A+R
Sbjct: 401 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460

Query: 94  VM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               ++ K   P V  YN LI+G  KA +   A  ++  +  +G+ P+++TY++++  LC
Sbjct: 461 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC 520

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
               ++ A  ++ Q L    KP V  + I+I                   G+C  G V  
Sbjct: 521 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIH------------------GLCSSGKVED 562

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q    ++ R C P+++++N L+     +  +E   K+   ++  GL+P++++Y+I + 
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            LC   +  DAV  L  A ++G+ P A +++ L+  Y
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 340 ILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +  A+ KN   DQAL+IF+++ ++ GC P + SYN++ +AL  S     A        + 
Sbjct: 59  VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  TYN LI   CR    D+A  LL  M    F P V SY  +I    K   ++++
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDA 178

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           +++   M E+G  P+   Y +LI+G 
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGF 204


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 237/468 (50%), Gaps = 22/468 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    ++G+  ++    ++M  NG  P V+    +I  + +  + N A+++ E++E
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD + YN LI G C   + E A ++L+     GF+P VVT+  +I   C     +
Sbjct: 351 KNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++ ++++   CK  +  +  LI + + + +  +A +LL+E+                
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G V  A + ++ +E  GCQP+  +YN L+  L+   K  +   L+T+M   G+ 
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV+TY+ L+   C +   ++A  +    ++ GL PD ++Y  L  A CK GR + A  F
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +   +  G     V Y T++  F K GN D A  + E++ D GC P+  +Y+ +  AL  
Sbjct: 590 I---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 AL ++ +M  +GI+     Y  LI  + R+G  D A  +  +M S+  +P+  +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           Y + I  +CK  R+ ++ +++  M  +G  P+  TY +LI+G G+ G+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 247/558 (44%), Gaps = 51/558 (9%)

Query: 4   VVSCIN-PKSNERVRVSSSAET---RPNTHLLSFDVKETQFMKLIKRSFRA-GKFDESLY 58
           VVS +N   + E +RVS+ A     R  +  L+   K   F      + R+  +FD + Y
Sbjct: 113 VVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNF------ALRSLARFDMTEY 166

Query: 59  F---IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
                  +V +G  PD V    +IK + +E     A R   +L + G EP+ F  NAL+ 
Sbjct: 167 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 226

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+C+  ++  A  +   +   G   +  +Y I+I  LC    +  A  +F  + RD C P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 286

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
            V  +T LI      G+   A  L D M                 G  K G +  A +  
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +E  GC PD  +YN L+  L +  K EE E+L+   +  G  P VVT++ LI+  C  
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            K +DA+ +           D   +  LI++  K  RL  A E L+ + ++G +P+++ Y
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            +I+  +CK+G  D ALE+ + +   GC PN  +YN++   L       +A+ ++++M  
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI P+ ITY +L+   C +   D A  L   ME    +P   +Y ++    CK  R  E
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS-------------MH 504
           +   +     KG    +  Y  LI+G    G    A  L   ++              +H
Sbjct: 586 AYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 642

Query: 505 AISRDTFKRLNRTFPLLD 522
           A+ +   KRLN   P+LD
Sbjct: 643 ALCKQ--KRLNEALPILD 658



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 233/516 (45%), Gaps = 66/516 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    +  +  E+   +  + ANG  P+V+  T +I  + +  K + A+ V++++E
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+ + YN+L+ G  K  ++  A  +L +++  G  P+V+TY  ++   C     +
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 159 SAFKVFDQLLRDNCKP--------------------------------TVITYTILIQAT 186
           +AF++F+ + ++  KP                                T + YT LI   
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G TD A  L++ M                  +CK+  + +A   +  +  RG +  +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y +L+  +L  GK +  +++  EM S G +P+  TY++ I+S C++G+ EDA D++  
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + +G+ PD  +Y+ LI      G +D A   L  M+   C P+   Y  +L    K   
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 350 A----------------DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           A                D   ++ E++   G  P V++Y+++ +    +G    A  ++ 
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M  KG+ P+E  Y  LI C C     ++A+  +  M    F+P + SY ++++G C   
Sbjct: 850 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
              +   +   + E G   +E  + +L +G+   G+
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 222/500 (44%), Gaps = 43/500 (8%)

Query: 23  ETRPNTHLLSFDVKE------TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +T     LL+  VKE        F  LI     A KFD++L     M+++ CK D+ +  
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KLI    ++ +  +A  ++  +   G  P+V  Y ++I G+CK+ ++++A +VL  +   
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+  TYN ++  L     +  A  +  ++ +D   P VITYT L+Q    E   D A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            +L + M                  +CK G   +A+ F+     +G     + Y  L+  
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDG 608

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G  +    L+  MI  G  P+  TYS+L+ +LC+  +  +A+ +L     +G+   
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            ++Y  LI    ++G+ D A    + M S G  P    Y   + ++CK G  + A ++  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+   G  P+V +YN +       G   RA   +  M+    EP+  TY  L+  L +  
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 419 M----------------VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +                +D    LL  M      PTV +Y+ +I GFCK  R+ E+  +L
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 463 AAMFEKGCKPNETTYVLLIE 482
             M  KG  PNE  Y LLI+
Sbjct: 849 DHMCGKGLSPNEDIYTLLIK 868



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK-----KFFQERKSNKAV 92
           T +  LI    +AG+ +E+   ++ M   G  P+  + T LIK     KFF+     KA+
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE-----KAL 880

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             + I+ + G +P + +Y  L+ G C     E    +   L   G++ D V + I+   L
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
              G ++  F++   + +  C  +  TY ++
Sbjct: 941 LKAGYVDICFQMLSIMEKRYCCISSQTYALV 971


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 228/475 (48%), Gaps = 8/475 (1%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFA 108
           AGKF+++   I  M++ G  PD    +K+I       K + A  + E ++  +  PDVF 
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI  FCK   ++ A K  D +   G +P+VVTY  +I +      + SA ++F+ +L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P V+TYT LI      GQ +KA ++   M       +     + +  +     P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR--GNADIPDVDMYFKIDDGNIRDPN 635

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +Y  L+  L    K +E   L+  M   G EPN + Y  LI   C+ GK ++A  V  
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E+G  P+ Y+Y  LI    KD RLDLA++ L  M+ + C P+++ Y  ++   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A  +   + + GC PNV +Y  M      +G   + L ++ +M +KG  P+ +TY 
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G++D+A  LL +M+ T +   +  Y  +I GF   R    S+ +L  + E 
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAEN 873

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL---VSMHAISRDTFKRLNRTFPL 520
              P    Y +LI+     G    A+EL   +    S  A  +D +  L  +  L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSL 928



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 216/515 (41%), Gaps = 78/515 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI++  R G ++ +L  +  +   G KP  +    L++ F +  + + A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D +     +   CKA +   A  ++++     F  D V Y  MI  LC   + E A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               ++   +C P V+TY IL+   + + Q  +  ++L  M                   
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLL---------------------------- 236
           C+ G    A++ ++ +   GCQP  + YN+L+                            
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 237 -------------RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
                        R L   GK+E+   ++ EM+S+G  P+  TYS +I  LC   K ++A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +    K   + PD ++Y  LI ++CK G L  A ++ D M+ DGC P++V Y  ++ A
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K      A E+FE +   GC PNV +Y  +      SG   +A  + + M      PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619

Query: 404 E----------------ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
                             TY +L+  LC+   V EA  LL  M      P  I Y+ +I 
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           GFCK  +++E+  V   M E+G  PN  TY  LI+
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 28/413 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+K  +    N A+  +  L+  G +P    YNAL+  F +A++++ A  V   +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F+ D  T    +  LC  G    A  + +   ++  K   + YT +I             
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMIS------------ 307

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+  +  +A  F+  + S  C P+V++Y +LL   L   +    +++++ MI
Sbjct: 308 ------GLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL- 315
           + G  P+   ++ LI + CR G    A  +L+   + G  P    Y+ LI   C + +L 
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 316 -----DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
                +LA +    M+    + + VN + +    C  G  ++A  I  ++   G  P+ S
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+ +   L ++     A  +  EM S  + PD  TY  LI   C+ G++ +A     +M
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
                 P V++Y  +I  + K R+++ + E+   M  +GC PN  TY  LI+G
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 30/382 (7%)

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
           N++I   C  G+   A +   +L     KP+ +TY  L++  +   + D A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                           +CK G   +A   +   E +    D + Y  ++  L     +EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEE 317

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
               ++ M S    PNVVTY IL+    R  +      +L     +G  P    ++ LI 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN--ADQALEIFEK----LS 361
           AYC+ G    A + L  M   GC P  V YN ++   C N    +   LE+ EK    + 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D     N  + + +   L  +G   +A  +I EM+SKG  PD  TY+ +I  LC    VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A  L  +M+S    P V +Y I+I  FCK   + ++ +    M   GC PN  TY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 482 EGIGYGGWRAEAMELANALVSM 503
                   +A  M  AN L  M
Sbjct: 558 HAY----LKARKMSSANELFEM 575



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    + GK DE+      M   G  P+V   + LI + F++++ + A++V+  +LE  
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y  +I G CK  + + A +++  +  +G  P+VVTY  MI      G ++   
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++  Q+    C P  +TY +LI      G  D A +LLDEM            Q      
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-----------QTYWPKH 845

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +  +  +N     ++++G       L+ E+      P +  Y ILI S C+ G+ E
Sbjct: 846 MAGYRKVIEGFNR--EFIISLG-------LLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 282 DAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            A+++ +  ++       D   Y  LI +     ++D A E    MI  G +P++  +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGC 365
           ++    +    ++AL+    LSD  C
Sbjct: 957 LVKGLIRINRWEEALQ----LSDCIC 978



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 60/296 (20%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  LI R F+  + D +L  +  M+ N C P+V++ T++I    +  K+++A R+M ++E
Sbjct: 709  YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            + G  P+V  Y A+I GF KA +++   +++ ++ ++G +P+ VTY ++I   C+ G+++
Sbjct: 769  EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 159  SAFKVFDQL--------------------------------LRDNCK-PTVITYTILIQA 185
             A ++ D++                                + +N   P +  Y ILI +
Sbjct: 829  DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDS 888

Query: 186  TMLEGQTDKAMKLLDEMGMCKK-------------------GMVGQAFQFVRSLESRGCQ 226
                G+ + A++L  EM  C                       V +AF+    +  RG  
Sbjct: 889  FCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 227  PDVISYNMLLRTLLNMGKWEEGEKL-------MTEMISRGLEPNVVTYSILISSLC 275
            P++  +  L++ L+ + +WEE  +L       M + +  G   +   Y  L  +LC
Sbjct: 949  PELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLC 1004



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 35/264 (13%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ LL  L   G     E+ + E+     E      ++LI   CR+G    A++ L   K
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----------GCLP--------- 332
           + G  P   +Y+ L+  + +  RLD A   +   +SD          GC           
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAY-LVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 333 --------------DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                         D V Y  +++  C+    ++A++   ++    C PNV +Y  +   
Sbjct: 284 REALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
                   R   ++S M+++G  P    +NSLI   CR G    A  LL  M     +P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 439 VISYNIIILGFCKTRRINESIEVL 462
            + YNI+I G C   ++  S++VL
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVL 426


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 223/442 (50%), Gaps = 21/442 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+     PD V    +I       K+    R ME+L 
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAAL---SKAQAMDRAMEVLT 70

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
               P+ F YN+++ G+C + Q E A  +  ++ S G  PDVVTYN ++  LC  G    
Sbjct: 71  VMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTE 130

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A K+FD +++   KP + TY  L+                   G   KG + +    +  
Sbjct: 131 ARKIFDSMVKRGLKPDITTYGTLLH------------------GYASKGALVEMHDLLAL 172

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +   G Q D   +N+L+       K +E   + ++M  +GL PN V Y  +I  LC+ G+
Sbjct: 173 MVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGR 232

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA+       +KGLTP+   Y  LI A C   + + A E +  ++  G  P+IV +NT
Sbjct: 233 LDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNT 292

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           IL + CK G   ++ ++F+ L  +G  P+V +Y+T+      +G    A+ +++ M+S G
Sbjct: 293 ILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++PD +TY++LI+  C+   +++A+ L  +MES    P +I+YNII+ G  +TRR   + 
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAK 412

Query: 460 EVLAAMFEKGCKPNETTYVLLI 481
           E+ A + E G +   +TY +++
Sbjct: 413 ELYARITESGTQLELSTYNIIL 434



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 215/430 (50%), Gaps = 23/430 (5%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAYNALISGFCKANQIELAN 126
           C PDVV    +I   F+E   +KA +   E+L++   PD   YN++I+   KA  ++ A 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           +VL  +      P+  TYN ++   CS G  E A  +F ++  D  +P V+TY  L+   
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY- 121

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                            +CK G   +A +   S+  RG +PD+ +Y  LL    + G   
Sbjct: 122 -----------------LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALV 164

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   L+  M+  G++ +   ++ILI +  +  K ++ V V    +++GLTP+A +Y  +I
Sbjct: 165 EMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVI 224

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK GRLD A+   + MI  G  P++V Y +++ A C     ++A E+  ++ D G  
Sbjct: 225 DGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN 284

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PN+  +NT+  +L   G  I +  +   +   G+ PD ITY++LI   C  G +D A+ L
Sbjct: 285 PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L  M S   +P  ++Y+ +I G+CK  R+ +++ +   M   G  P+  TY +++ G+  
Sbjct: 345 LTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404

Query: 487 GGWRAEAMEL 496
               A A EL
Sbjct: 405 TRRTAAAKEL 414



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 31/172 (18%)

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL------- 414
           D  CPP+V SYNT+   L+  GD  +A     EML + + PD +TYNS+I+ L       
Sbjct: 4   DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63

Query: 415 ------------------------CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
                                   C  G  ++A+G+   M S    P V++YN ++   C
Sbjct: 64  RAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  +  E+ ++  +M ++G KP+ TTY  L+ G    G   E  +L   +V 
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     AGK D ++  +  MV+ G KPD V  + LI  + +  +   A+ + + +E
Sbjct: 325 YSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME 384

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN ++ G  +  +   A ++  R+   G   ++ TYNI++        + 
Sbjct: 385 SNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLM 444

Query: 159 SAFKVF 164
             F  F
Sbjct: 445 MHFGCF 450


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 227/469 (48%), Gaps = 25/469 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           +  L+    +AG+ DE++  +E MV  G  P +   T +I    +  +  +A R+ +++L
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 99  EKYGEPDVFAYNALISGFCKANQIELA----NKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
                PD F Y ALISG  K  +++ A    N++++   +RG  PDVV +N++I  LC+ 
Sbjct: 174 GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G +E A   FD+L  D+   T  T+  L+ A                  +CK     +A 
Sbjct: 234 GNLEDALAYFDEL-DDSLDLTHFTFNPLVAA------------------LCKAERTEEAI 274

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            FV+ +  R C P + +Y  L+   L +G+ +E    + E + RG  P+ VTY+ +I  L
Sbjct: 275 AFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGL 334

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ G+ E+  +     + +G  PDA +Y  LI  + K   +  A      M+  G +   
Sbjct: 335 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 394

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YN IL   CK G   +A   F  + + GC   V +Y+ +     S G+   A+ +   
Sbjct: 395 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRR 454

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC-KTR 453
           ML +G EP+ ++YN +I  LCR G + +A      +   R  P V ++N  + G C +  
Sbjct: 455 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLD 514

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            + + +E+  +M  +G  PN  +Y +L++GI   G     +E+ + +VS
Sbjct: 515 TVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 232/478 (48%), Gaps = 57/478 (11%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLD 130
           D  +CT L+    +  + ++A+ +++  E    PD+ A+  +I+G C+  +++ A  VL+
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLD--EMPCSPDMVAFTVVINGLCREKRLDEAFSVLE 65

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
           R    G  PD VTYN+ I  LC    ++ AF++  ++    C PT +TYT L+   +  G
Sbjct: 66  RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 125

Query: 191 QTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           + D+AM +L++M                 G+ K G V +A +    +   GC+PD   Y 
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185

Query: 234 MLLRTLLNMGKWEEGEKLMTEMI----SRGLEPNVV------------------------ 265
            L+  L  +GK +E    + +M+    +RG+EP+VV                        
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245

Query: 266 ----------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                     T++ L+++LC+  +TE+A+  ++   E+   P  ++Y  L+  + K GRL
Sbjct: 246 LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+  L   +  G +PD V Y +I+   CK G  ++  E F ++ + G  P+  +Y  +
Sbjct: 306 DEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 +    +A  +  +ML  G     +TYN ++  LC+ G V EA    + ME    
Sbjct: 366 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 425

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             TV++Y+ ++ GFC    ++ ++E+   M ++GC+PN  +Y ++I G+   G  A+A
Sbjct: 426 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 483



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 20/367 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S D+    F  L+    +A + +E++ F++ M    C P +   T L+  F +  + ++A
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 92  V-RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + ++ E +E+   PD   Y ++I G CK  ++E   +    +R+RG+ PD VTY  +I  
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
                MI  A +V+ Q+L+     + +TY I++      G+  +A      M        
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G C +G V  A +  R +  RGC+P+++SYN+++R L   GK  +      
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 488

Query: 254 EMISRGLEPNVVTYSILISSLC-RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           +++ R L P+V T++  +  LC R     D V++  +   +G +P+ +SY  L+   C+ 
Sbjct: 489 KLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRA 548

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G L++ +E    M+S G  PD+V +NT++   C  G  D+ALE+F +L      P+  SY
Sbjct: 549 GGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSY 607

Query: 373 NTMFSAL 379
            ++  AL
Sbjct: 608 WSLLDAL 614



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 8/264 (3%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI R L    V  + L++ LC+ G+ + A+ +L    E   +PD  ++  +I+  C++ R
Sbjct: 1   MIDRKLVDTRVC-TALLNGLCKTGQLDRAMLLL---DEMPCSPDMVAFTVVINGLCREKR 56

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A   L+  +  GC PD V YN  +   CK    D A ++ +K+ +  C P   +Y  
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  +G    A+ ++ +M+ KG  P   TY  +I  L + G V+EA  + VDM    
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC----KPNETTYVLLIEGIGYGGWR 490
            RP    Y  +I G  K  +++E++  L  M E GC    +P+   + L+I  +   G  
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 491 AEAMELANALVSMHAISRDTFKRL 514
            +A+   + L     ++  TF  L
Sbjct: 237 EDALAYFDELDDSLDLTHFTFNPL 260



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           S  T PN H  S          L+    RAG  + +L     MV+ G  PDVV+   LI+
Sbjct: 528 SQGTSPNLHSYSI---------LMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578

Query: 81  KFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
                 + ++A+ V   LE+   PD ++Y +L+    +  ++E A  +   ++ +G +P
Sbjct: 579 WLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 237/468 (50%), Gaps = 22/468 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    ++G+  ++    ++M  NG  P V+    +I  + +  + N A+++ E++E
Sbjct: 291 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 350

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD + YN LI G C   + E A ++L+     GF+P VVT+  +I   C     +
Sbjct: 351 KNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++ ++++   CK  +  +  LI + + + +  +A +LL+E+                
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G V  A + ++ +E  GCQP+  +YN L+  L+   K  +   L+T+M   G+ 
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV+TY+ L+   C +   ++A  +    ++ GL PD ++Y  L  A CK GR + A  F
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +   +  G     V Y T++  F K GN D A  + E++ D GC P+  +Y+ +  AL  
Sbjct: 590 I---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 AL ++ +M  +GI+     Y  LI  + R+G  D A  +  +M S+  +P+  +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           Y + I  +CK  R+ ++ +++  M  +G  P+  TY +LI+G G+ G+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 225/506 (44%), Gaps = 40/506 (7%)

Query: 51  GKFDESLYF---IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            +FD + Y       +V +G  PD V    +IK + +E     A R   +L + G EP+ 
Sbjct: 159 ARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPET 218

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F  NAL+ G+C+  ++  A  +   +   G   +  +Y I+I  LC    +  A  +F  
Sbjct: 219 FTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLM 278

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           + RD C P V  +T LI      G+   A  L D M                 G  K G 
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    +E  GC PD  +YN L+  L +  K EE E+L+   +  G  P VVT++ 
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C   K +DA+ +           D   +  LI++  K  RL  A E L+ + ++G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P+++ Y +I+  +CK+G  D ALE+ + +   GC PN  +YN++   L       +A+
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++++M   GI P+ ITY +L+   C +   D A  L   ME    +P   +Y ++    
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS------- 502
           CK  R  E+   +     KG    +  Y  LI+G    G    A  L   ++        
Sbjct: 578 CKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 503 ------MHAISRDTFKRLNRTFPLLD 522
                 +HA+ +   KRLN   P+LD
Sbjct: 635 YTYSVLLHALCKQ--KRLNEALPILD 658



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 233/516 (45%), Gaps = 66/516 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    +  +  E+   +  + ANG  P+V+  T +I  + +  K + A+ V++++E
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+ + YN+L+ G  K  ++  A  +L +++  G  P+V+TY  ++   C     +
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 159 SAFKVFDQLLRDNCKP--------------------------------TVITYTILIQAT 186
           +AF++F+ + ++  KP                                T + YT LI   
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G TD A  L++ M                  +CK+  + +A   +  +  RG +  +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y +L+  +L  GK +  +++  EM S G +P+  TY++ I+S C++G+ EDA D++  
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + +G+ PD  +Y+ LI      G +D A   L  M+   C P+   Y  +L    K   
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 350 A----------------DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           A                D   ++ E++   G  P V++Y+++ +    +G    A  ++ 
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M  KG+ P+E  Y  LI C C     ++A+  +  M    F+P + SY ++++G C   
Sbjct: 850 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
              +   +   + E G   +E  + +L +G+   G+
Sbjct: 910 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 222/500 (44%), Gaps = 43/500 (8%)

Query: 23  ETRPNTHLLSFDVKE------TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +T     LL+  VKE        F  LI     A KFD++L     M+++ CK D+ +  
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KLI    ++ +  +A  ++  +   G  P+V  Y ++I G+CK+ ++++A +VL  +   
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+  TYN ++  L     +  A  +  ++ +D   P VITYT L+Q    E   D A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            +L + M                  +CK G   +A+ F+     +G     + Y  L+  
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDG 608

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G  +    L+  MI  G  P+  TYS+L+ +LC+  +  +A+ +L     +G+   
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            ++Y  LI    ++G+ D A    + M S G  P    Y   + ++CK G  + A ++  
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+   G  P+V +YN +       G   RA   +  M+    EP+  TY  L+  L +  
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 419 M----------------VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +                +D    LL  M      PTV +Y+ +I GFCK  R+ E+  +L
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 463 AAMFEKGCKPNETTYVLLIE 482
             M  KG  PNE  Y LLI+
Sbjct: 849 DHMCGKGLSPNEDIYTLLIK 868



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 1/292 (0%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A Q +R   S         YN  LR+L      E   ++ ++++  GL P+ VTY+ +
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 189

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G    A    R   E GL P+ ++ + L+  YC+ G L  A      M   GC
Sbjct: 190 IKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC 249

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +  +Y  ++   C+     +AL +F  +   GC PNV ++  + S L  SG    A  
Sbjct: 250 QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 309

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   G+ P  +TYN++I    + G +++A+ +   ME     P   +YN +I G C
Sbjct: 310 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             ++  E+ E+L    ++G  P   T+  LI G        +A+ + N ++S
Sbjct: 370 D-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 420



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK-----KFFQERKSNKAV 92
           T +  LI    +AG+ +E+   ++ M   G  P+  + T LIK     KFF+     KA+
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE-----KAL 880

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             + I+ + G +P + +Y  L+ G C     E    +   L   G++ D V + I+   L
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
              G ++  F++   + +  C  +  TY ++
Sbjct: 941 LKAGYVDICFQMLSIMEKRYCCISSQTYALV 971


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 229/452 (50%), Gaps = 19/452 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  LI    ++G   E+L     MV  G KP +   + L+    + R +   
Sbjct: 189 GFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETV 248

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             ++E +E  G +P+++ Y   I    +A +I+ A +++ R+   G  PDVVTY ++I +
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDA 308

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC+ G ++ A ++F ++   + KP  +TY                + +LD+   C  G +
Sbjct: 309 LCTAGKLDDAMELFVKMKASSHKPDRVTY----------------ITMLDKFSDC--GDL 350

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+  +F   +E+ G  PDVI++ +L+  L   G  +E   L+  M  +G+ PN+ TY+ L
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS L R  + +DA+D+    +  G+ P AY+Y   I  Y K GR D A+E  + M   G 
Sbjct: 411 ISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+IV  N  L +  + G   +A  IF +L   G  P+  +YN M      +G    A+ 
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++S+M     EPD I  NSLI+ L + G VDEA  +   ++  +  PTV++YN +I G  
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K  ++  ++E+ A+M   GC PN  T+  +++
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILD 622



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 227/462 (49%), Gaps = 20/462 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           RAG+ DE+   ++ M  +GC PDVV  T LI       K + A+ + +++     +PD  
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++  F     +    +    + + G++PDV+T+ I++ +LC  G I+ AF + D +
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +    P + TY  LI   +   + D A+ L + M                  E+ G  P
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM------------------ETLGVVP 437

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y + +      G+ ++  +   +M  RG+ PN+V  +  + SL   G+  +A  + 
Sbjct: 438 TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIF 497

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  GL PD+ +Y+ ++  Y K G++D AIE L  M  + C PDI+  N+++    K 
Sbjct: 498 NRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKA 557

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A ++F +L D+   P V +YNT+ + L   G   RA+ + + M   G  P+ IT+
Sbjct: 558 GRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITF 617

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+++ CLC++  VD A+ +L  M +    P V+++N II G    +R++++I +   M +
Sbjct: 618 NTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-K 676

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           K   P+  T   L+ G+   G   +A ++A   V    +  D
Sbjct: 677 KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVD 718



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 237/541 (43%), Gaps = 89/541 (16%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            +AG+ DE++  +  M  N C+PD+++   LI   ++  + ++A ++   L+     P V 
Sbjct: 521  KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN LI+G  K  Q++ A ++   +   G  P+ +T+N ++  LC    ++ A K+  ++
Sbjct: 581  TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
               NC P V+T+  +I   ++E +   A+ L  +M                G+ K G++ 
Sbjct: 641  TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLME 700

Query: 212  QAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEE----GEKLMTEMISR-------- 258
             AF+       R G   D   +  L+  +L     E+    G++L+   + +        
Sbjct: 701  DAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPI 760

Query: 259  ------------------------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
                                    G++P + +Y+ LI         E A ++    K  G
Sbjct: 761  IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              PD ++Y+ L+ A+ K G+++   E  + MI   C P+ + +N I+A   K+ + D+AL
Sbjct: 821  CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 355  -----------------------------------EIFEKLSDVGCPPNVSSYNTMFSAL 379
                                               E+FE++ D GC PN + YN + +  
Sbjct: 881  DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940

Query: 380  WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              +GD   A  +   M+ +GI PD  +Y SL+ CLC  G VD+A+     ++ T      
Sbjct: 941  GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000

Query: 440  ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            I+YN++I G  ++ RI E++ +   M  +G  P+  TY  LI  +G  G   +A +L   
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060

Query: 500  L 500
            L
Sbjct: 1061 L 1061



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 53/475 (11%)

Query: 75  CTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           C  +++     R+    V V  +++ +  + D+  Y  +  G      +        ++R
Sbjct: 127 CNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMR 186

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             GF  +  +YN +I  L   G+   A +++ +++ +  KP++ T++ L+ AT     T+
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTE 246

Query: 194 KAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
               LL+EM                  + + G + +A + ++ +E  GC PDV++Y +L+
Sbjct: 247 TVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLI 306

Query: 237 RTLLNMGKWEEGEKLM-----------------------------------TEMISRGLE 261
             L   GK ++  +L                                    +EM + G  
Sbjct: 307 DALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA 366

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V+T++IL+++LC+ G  ++A  +L   +++G+ P+ ++Y+ LIS   +  RLD A++ 
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + M + G +P    Y   +  + K+G +D+ALE FEK+   G  PN+ + N    +L  
Sbjct: 427 FNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAE 486

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  + + + S G+ PD +TYN ++ C  + G VDEA+ LL DM   +  P +I 
Sbjct: 487 MGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIV 546

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            N +I    K  R++E+ ++   + +    P   TY  LI G+G  G    AMEL
Sbjct: 547 INSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMEL 601



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 226/508 (44%), Gaps = 56/508 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+ D++L   E M   G  P++V C   +    +  +  +A  +   L+  G  PD  
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN ++  + KA Q++ A ++L  +      PD++  N +I +L   G ++ A+K+F +L
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
                 PTV+TY  LI     EGQ  +AM+L   M                  +CK   V
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  + +  C PDV+++N ++  L+   +  +   L  +M  + L P+ VT   L
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTL 689

Query: 271 ISSLCRDGKTEDAVDV-------------------------LRAAKEKGL---------- 295
           +  + ++G  EDA  +                          +A  EK +          
Sbjct: 690 LPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGR 749

Query: 296 -TPDAYSYDPLISAYCKDGRLDLAIE-FLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
              D     P+I   CK  +  +A   F+ +    G  P + +YN ++  F    N + A
Sbjct: 750 VCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMA 809

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +F ++ + GC P+V +YN +  A   SG       +  +M+    +P+ IT+N +I+ 
Sbjct: 810 WNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIAN 869

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           L +   +D+A+ L  D+ S  F PT  +Y  ++ G  K+ R+ E+ E+   M + GC+PN
Sbjct: 870 LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALV 501
              Y +LI G G  G    A EL   +V
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFKRMV 957



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 171/370 (46%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK  Q  +A  V  R  +  G  P + +YN +I         E A+ +F ++   
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P V TY +L                LD  G  K G + + F+    +    C+P+ I
Sbjct: 820  GCAPDVFTYNLL----------------LDAHG--KSGKINELFELYEQMICSSCKPNTI 861

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            ++N+++  L+     ++   L  +++S    P   TY  L+  L + G+ E+A ++    
Sbjct: 862  THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             + G  P+   Y+ LI+ + K G ++ A E    M+ +G  PD+ +Y +++   C+ G  
Sbjct: 922  VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D AL  FEKL   G   +  +YN M   L  S     AL +  EM S+GI PD  TYNSL
Sbjct: 982  DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            I  L   GMV++A  L  +++     P V +YN +I G+  +   + +  V   M   GC
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 471  KPNETTYVLL 480
             PN  T+  L
Sbjct: 1102 SPNTGTFAQL 1111



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            LI    + G  + +    + MV  G +PD+   T L+    +  + + A+   E L++ G
Sbjct: 936  LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
               D  AYN +I G  ++++IE A  + D ++SRG +PD+ TYN +I +L   GM+E A 
Sbjct: 996  LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            K++++L     +P V TY  LI+   + G +D A  +   M      MVG          
Sbjct: 1056 KLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM------MVG---------- 1099

Query: 222  SRGCQPDVISYNML 235
              GC P+  ++  L
Sbjct: 1100 --GCSPNTGTFAQL 1111


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 226/471 (47%), Gaps = 18/471 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   RA +  ++ + ++ M   G  P+V++   LI  F +    NKA+ + +++   G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  YN LI G+CK  Q + A ++L  + S GF+ +  ++  +I  LCS  M +SA 
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +   ++L  N  P     T LI      G+  KA++L  +                  G+
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + +AF+  + +  RGC  D +SYN L+       K +E    + EM+ RGL+P+ 
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TYSILI  L    K E+A+      K  G+ PD Y+Y  +I   CK  R +   EF D 
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S    P+ V YN ++ A+C++G    ALE+ E +   G  PN ++Y ++   +     
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  +G+EP+   Y +LI    + G + +   LL +M S    P  I+Y +
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +I G+ +   + E+  +L  M EKG  P+  TY   I G    G   EA +
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 217/468 (46%), Gaps = 18/468 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G++DE+  F E MV  G +P ++  + L+K   + ++   A  V++ + K G  P+V  Y
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI  F +A  +  A ++ D + S+G S    TYN +I   C  G  ++A ++  ++L 
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                   ++T +I         D A++ + EM                 G+CK G   +
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +      ++G   D  + N LL  L   GK +E  ++  E++ RG   + V+Y+ LIS
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C   K ++A   L    ++GL PD Y+Y  LI       +++ AI+F D    +G LP
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+  Y+ ++   CK    ++  E F+++      PN   YN +  A   SG    AL + 
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M  KGI P+  TY SLI  +     V+EA  L  +M      P V  Y  +I G+ K 
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++ +   +L  M  K   PN+ TY ++I G    G   EA  L N +
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 205/440 (46%), Gaps = 18/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           +   G  P    C  L+    +  +  K     +++ K   PDV+ +   I+ FCK  ++
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 289

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E A K+  ++   G +P+VVT+N +I  L   G  + AF   ++++    +PT+ITY+IL
Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           ++                  G+ +   +G A+  ++ +  +G  P+VI YN L+ + +  
Sbjct: 350 VK------------------GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   +  ++   M+S+GL     TY+ LI   C++G+ ++A  +L+     G   +  S+
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             +I   C     D A+ F+  M+     P      T+++  CK+G   +ALE++ +  +
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 511

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   +  + N +   L  +G    A  +  E+L +G   D ++YN+LIS  C    +DE
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A   L +M     +P   +Y+I+I G     ++ E+I+        G  P+  TY ++I+
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631

Query: 483 GIGYGGWRAEAMELANALVS 502
           G        E  E  + ++S
Sbjct: 632 GCCKAERTEEGQEFFDEMMS 651



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 57/411 (13%)

Query: 112 LISGFC---KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           LI  +C   K +   LA  V   L ++G  P   T NI++ SL      +   + FD + 
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 266

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V  +T  I A                   CK G V +A +    +E  G  P+
Sbjct: 267 K-GVSPDVYLFTTAINA------------------FCKGGKVEEAVKLFSKMEEAGVAPN 307

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+++N ++  L   G+++E      +M+ RG+EP ++TYSIL+  L R  +  DA  VL+
Sbjct: 308 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              +KG  P+   Y+ LI ++ + G L+ AIE  D M+S G       YNT++  +CKNG
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427

Query: 349 NADQALEIFEKLSDVGCPPNVSSY-----------------------------------N 373
            AD A  + +++  +G   N  S+                                    
Sbjct: 428 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 487

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ S L   G   +AL +  + L+KG   D  T N+L+  LC  G +DEA  +  ++   
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                 +SYN +I G C  ++++E+   L  M ++G KP+  TY +LI G+
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 269 ILISSLCRDGKTED---AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +LI   C   K +    A+DV      KG+ P   + + L+++  +        E  D +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-V 264

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+  + T + AFCK G  ++A+++F K+ + G  PNV ++NT+   L   G  
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A     +M+ +G+EP  ITY+ L+  L R   + +A  +L +M    F P VI YN +
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I  F +   +N++IE+   M  KG     +TY  LI+G    G    A  L   ++S+
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E R +            +  LIK      + +E+    E M   G +P+V   T
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732

Query: 77  KLIKKFFQERKSNKAVRV----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
            LI  +    K  + V+V     E+  K   P+   Y  +I G+ +   +  A+++L+ +
Sbjct: 733 ALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           R +G  PD +TY   I     +G +  AFK  D+   +N    +  +  LIQ
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNKLIQ 838


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 238/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV  G  PD      LI  +    +  +AVRV + + +    PDV 
Sbjct: 268 KARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A N L+   CK  +I+ A  V D +  +G +PDV +Y IM+    ++G +     +FD +
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P + T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 388 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +Y+ L++     G   + ++L++E+++ G+  ++V +  +
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL PDA  Y+ L+  YC  G+++ A+   D M+S G 
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+   YN +   L+ +G  + A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  ++ TY+ ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++   G  P   TY ++I  +   G   EA ++ +++
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM 737



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 226/458 (49%), Gaps = 19/458 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
           F+ G  +++    + MV  G  PD+V  + ++    + R  +KA   + +++ K   PD 
Sbjct: 232 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + YN LI G+    Q + A +V   +R +   PDVV  N ++GSLC  G I+ A  VFD 
Sbjct: 292 WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDT 351

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P V +YTI++     +G       L D M       +G            G  
Sbjct: 352 MAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM-------LGD-----------GIA 393

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD+ ++N+L++   N G  ++   +  EM   G++P+VVTY  +I++LCR GK +DA++ 
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++G+ PD Y+Y  LI  +C  G L  A E +  ++++G   DIV + +I+   CK
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A  IF+   +VG  P+   YN +       G   +AL +   M+S GIEP+ + 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +L++  C+ G +DE + L  +M     +P+ I YNIII G  +  R   +      M 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           E G   N+ TY +++ G+       EA+ L   L +M+
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 234/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + D ++ + L+K F + +++++A+ ++  L +  E    P
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL--LHRTPELGCVP 182

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+YN L+   C   +   A+ +L  +   G   SPDVV YN +I      G +  A  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY+ ++ A                  +CK   + +A  F+R + +
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHA------------------LCKARAMDKAEAFLRQMVN 284

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  PD  +YN L+    + G+W+E  ++  EM  + + P+VV  + L+ SLC+ GK ++
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY  +++ Y   G L    +  D M+ DG  PDI  +N ++ 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  Y+ LI   C  G + +A  L+ ++ +   R  ++ +  II   CK  R+ ++  + 
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 213/441 (48%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M      PDVV    L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             +++G+     +     + D +   G +PD+ T+N++I +  + GM++ A  +F+++  
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TY  +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G + D++ +  ++  L  +G+  + + +    ++ GL P+ V Y++L+ 
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + YN I+    + G    A   F ++++ G   N  +Y+ +   L+ +     A+ + 
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ D IT N++I+ + +   V+EA  L   +  +   P  ++Y+I+I    K 
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKE 724

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+P+
Sbjct: 725 GLVEEAEDMFSSMQNAGCEPD 745



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 57/427 (13%)

Query: 115 GFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDNC 172
           G   A  + L N+   R +  R  SP   TY I++   C+R    E A   F QLLR   
Sbjct: 86  GSGPALAVALFNRAASRAQGPRVLSPTSYTYAILM-DCCTRAHRPELALAFFGQLLRTGL 144

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +   I  + L++      +TD+A+ +L                 +      GC PDV SY
Sbjct: 145 RVDAIIASHLLKGFCEAKRTDEALDIL-----------------LHRTPELGCVPDVFSY 187

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGL--EPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           N+LL++L N GK  + + L+  M   G    P+VV Y+ +I    ++G    A D+ +  
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-------------------- 330
            ++G+ PD  +Y  ++ A CK   +D A  FL  M++ G                     
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307

Query: 331 ---------------LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                          LPD+V  NT++ + CK G   +A ++F+ ++  G  P+V SY  M
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            +   + G  +    +   ML  GI PD  T+N LI      GM+D+A+ +  +M     
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +P V++Y  +I   C+  ++++++E    M ++G  P++  Y  LI+G    G   +A E
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487

Query: 496 LANALVS 502
           L + +++
Sbjct: 488 LISEIMN 494



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 205/452 (45%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    ++M   G  PDV   T ++  +  +        + +++   G  PD++
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  +     ++ A  + + +R  G  P VVTY  +I +LC  G ++ A + F+Q+
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P    Y  LIQ     G   KA +L+ E+                  +CK G V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A        + G  PD + YNML+     +GK E+  ++   M+S G+EPNVV Y  L
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C+ G+ ++ + + R   +KG+ P    Y+ +I    + GR   A      M   G 
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +   Y+ +L    KN   D+A+ +F++L  +    ++ + NTM + ++ +     A  
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + +   G+ P  +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K   I  +   L+ + E+       T +LL++
Sbjct: 758 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 190/429 (44%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KP VV    +I    +  K + A+ +  +++
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AY+ LI GFC    +  A +++  + + G   D+V +  +I +LC  G + 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y +L+    L G+ +KA+++ D M                
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM---------------- 562

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ +G++P+ + Y+I+I  L   G
Sbjct: 563 --VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  +  +Y  ++    K+   D AI     + +     DI+  N
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++A   +    ++A ++F  +S  G  P   +Y+ M + L   G    A  M S M + 
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EPD    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 741 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 800

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 801 IRFLPAKYH 809


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 238/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV  G  PD      LI  +    +  +AVRV + + +    PDV 
Sbjct: 268 KARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A N L+   CK  +I+ A  V D +  +G +PDV +Y IM+    ++G +     +FD +
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P + T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +Y+ L++     G   + ++L++E+++ G+  ++V +  +
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL PDA  Y+ L+  YC  G+++ A+   D M+S G 
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+   YN +   L+ +G  + A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  ++ TY+ ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++   G  P   TY ++I  +   G   EA ++ +++
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM 737



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 225/458 (49%), Gaps = 19/458 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
           F+ G  +++    + MV  G  PD+V  + ++    + R  +KA   + +++ K   PD 
Sbjct: 232 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + YN LI G+    Q + A +V   +R +   PDVV  N ++GSLC  G I+ A  VFD 
Sbjct: 292 WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDT 351

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P V +YTI++     +G       L D M       +G            G  
Sbjct: 352 MAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM-------LGD-----------GIA 393

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P + ++N+L++   N G  ++   +  EM   G++P+VVTY  +I++LCR GK +DA++ 
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++G+ PD Y+Y  LI  +C  G L  A E +  ++++G   DIV + +I+   CK
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A  IF+   +VG  P+   YN +       G   +AL +   M+S GIEP+ + 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +L++  C+ G +DE + L  +M     +P+ I YNIII G  +  R   +      M 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           E G   N+ TY +++ G+       EA+ L   L +M+
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 233/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + D ++ + L+K F + +++++A+ ++  L +  E    P
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL--LHRTPELGCVP 182

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+YN L+   C   +   A+ +L  +   G   SPDVV YN +I      G +  A  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY+ ++ A                  +CK   + +A  F+R + +
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHA------------------LCKARAMDKAEAFLRQMVN 284

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  PD  +YN L+    + G+W+E  ++  EM  + + P+VV  + L+ SLC+ GK ++
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY  +++ Y   G L    +  D M+ DG  P I  +N ++ 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  Y+ LI   C  G + +A  L+ ++ +   R  ++ +  II   CK  R+ ++  + 
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 192/427 (44%), Gaps = 57/427 (13%)

Query: 115 GFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDNC 172
           G   A  + L N+   R +  R  SP   TY I++   C+R    E A   F QLLR   
Sbjct: 86  GSGPALAVALFNRAASRAQGPRVLSPTSYTYAILM-DCCTRAHRPELALAFFGQLLRTGL 144

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +   I  + L++      +TD+A+ +L                 +      GC PDV SY
Sbjct: 145 RVDAIIASHLLKGFCEAKRTDEALDIL-----------------LHRTPELGCVPDVFSY 187

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGL--EPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           N+LL++L N GK  + + L+  M   G    P+VV Y+ +I    ++G    A D+ +  
Sbjct: 188 NILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-------------------- 330
            ++G+ PD  +Y  ++ A CK   +D A  FL  M++ G                     
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307

Query: 331 ---------------LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                          LPD+V  NT++ + CK G   +A ++F+ ++  G  P+V SY  M
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            +   + G  +    +   ML  GI P   T+N LI      GM+D+A+ +  +M     
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +P V++Y  +I   C+  ++++++E    M ++G  P++  Y  LI+G    G   +A E
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487

Query: 496 LANALVS 502
           L + +++
Sbjct: 488 LISEIMN 494



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 203/452 (44%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    ++M   G  PDV   T ++  +  +        + +++   G  P + 
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  +     ++ A  + + +R  G  P VVTY  +I +LC  G ++ A + F+Q+
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P    Y  LIQ     G   KA +L+ E+                  +CK G V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A        + G  PD + YNML+     +GK E+  ++   M+S G+EPNVV Y  L
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C+ G+ ++ + + R   +KG+ P    Y+ +I    + GR   A      M   G 
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +   Y+ +L    KN   D+A+ +F++L  +    ++ + NTM + ++ +     A  
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + +   G+ P  +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K   I  +   L+ + E+       T +LL++
Sbjct: 758 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 190/429 (44%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KP VV    +I    +  K + A+ +  +++
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AY+ LI GFC    +  A +++  + + G   D+V +  +I +LC  G + 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y +L+    L G+ +KA+++ D M                
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM---------------- 562

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ +G++P+ + Y+I+I  L   G
Sbjct: 563 --VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  +  +Y  ++    K+   D AI     + +     DI+  N
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++A   +    ++A ++F  +S  G  P   +Y+ M + L   G    A  M S M + 
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNA 740

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EPD    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 741 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 800

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 801 IRFLPAKYH 809


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 229/485 (47%), Gaps = 24/485 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           F  +I    R  + DE+   +E  V  GC+PD V     I    +  + + A ++++ + 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK   P    Y AL+ G  KA +++ A  VL+++  +G SP + TY ++I  L   G +E
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++F  +L + C+P    YT LI+     G+ ++A  L  E                 
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 203 -----GMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                G+CK G + +A Q F      RG  PD ++Y  ++  L  +G+ EEG +   EM 
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           +RG EP+ VTY+ LI    +      A  V R   + G      +Y+ ++   CK GR+ 
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A      M   GC+  +V Y+ ++  FC  GN   A+E+F ++ D GC PN+ SYN + 
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 369

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-RDGMVDEAVGLLVDMESTRF 435
             L  +G   +A     ++L + + PD  T+N+ +  LC R   V + V L   M S   
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGT 429

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P + SY+I++ G C+   +  ++E+   M  +G  P+   +  LI  +   G   EA+E
Sbjct: 430 SPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALE 489

Query: 496 LANAL 500
           +   L
Sbjct: 490 VFREL 494



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 222/459 (48%), Gaps = 24/459 (5%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
           C PD+V  T +I    +E++ ++A  V+E   + G EPD   YN  I G CKA +++ A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           ++L ++  +   P  VTY  ++  L   G ++ A  V +Q++     PT+ TYT++I   
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ--- 226
              G+ ++A ++  +M                 G+CK G   +A+   +   +R      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 227 -PDVISYNMLLRTLLNMGKWEEGEKLMT-EMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            PDV++Y  L+  L   G+  E  ++   E + RG  P+ VTY+ +I  LC+ G+ E+  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +     + +G  PDA +Y  LI  + K   +  A      M+  G +   V YN IL   
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G   +A   F  + + GC   V +Y+ +     S G+   A+ +   ML +G EP+ 
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC-KTRRINESIEVLA 463
           ++YN +I  LCR G + +A      +   R  P V ++N  + G C +   +++ +E+  
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFE 422

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +M  +G  PN  +Y +L++GI   G    A+E+   +VS
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVS 461



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 201/433 (46%), Gaps = 26/433 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----- 103
           +AG+ +E+      M+ NGC+PD  + T LIK   +  K  +A  + +            
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 104 PDVFAYNALISGFCKANQIELANKVLD-RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           PDV  Y +LI G CKA +I  A +V D     RGF PD VTY  +I  LC  G +E   +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            F ++     +P  +TY  LI                   G  K  M+ +A +  R +  
Sbjct: 244 RFHEMRNRGYEPDAVTYAALID------------------GFMKAKMIPKAHRVYRQMLQ 285

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G     ++YN++L  L   G+  E       M  RG    VVTYS L+   C +G    
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           AV++ R   ++G  P+  SY+ +I   C+ G+L  A  + + ++     PD+  +N  L 
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405

Query: 343 AFCKN-GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             C+        +E+FE +   G  PN+ SY+ +   +  +G    AL +  EM+S+G+ 
Sbjct: 406 GLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD + +N+LI  LC  G VDEA+ +  ++E  R  P   SY  ++ G  +  R+ E+  +
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELER-RSAPDAWSYWSLLDGLSRCERMEEARLL 524

Query: 462 LAAMFEKGCKPNE 474
              M  +GC P  
Sbjct: 525 SFHMKLQGCAPRH 537


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 228/463 (49%), Gaps = 33/463 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME- 96
           + F  L+    +   + +  Y    M  +G  PD      L+       +  + + VM  
Sbjct: 97  SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAG 156

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +   PD+  Y  LI G C  ++I  A  +  R++  G +P+ +TY  ++  LC  G 
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 157 IESAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           I  A K+  ++L D      N KP VI+Y+I+I A   + + D+A  L +EM        
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEM-------- 268

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                     + +G  P VISY  L+        WEE ++L  EM+++G++PNVVT+++L
Sbjct: 269 ----------KVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVL 310

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC++GK  +A D+L    ++G+ P+  +Y+ LI  +C  G L+ A E    M S GC
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD++ Y  ++  +CK    ++A++++  +  VG  P+V +Y  + + L+  G    A  
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   GI  D   Y   ++ LC++G + EA+ L   ++S   +  +  +N +I G C
Sbjct: 431 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 490

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  ++  + E+   + ++  +P+  TY ++I     GG   +A
Sbjct: 491 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 533



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 51/342 (14%)

Query: 205 CKKGMVG--QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK G +   QAFQF   +      P + S+  LL  L  +  + +   L  +M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +  T +IL++ LC   +  + + V+     +G  PD  +Y  LI   C + R+  A    
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGN--------------------------------- 349
             M   GC P+ + Y T++   C+ GN                                 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 350 --------ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
                    D+A ++FE++   G  P V SY ++   +W    +     + +EM+++G++
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSL---MWEEAKR-----LFNEMVNQGVQ 301

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ +T+N LI  LC++G V EA  LL  M      P +++YN +I GFC    +N + E+
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +M  KGC+P+   Y +LI G        EAM+L N ++ +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 7/238 (2%)

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           T   V    +  +  L+   +++ P I +   +     A+      +S       +++  
Sbjct: 4   TSKTVPSASSIVKPNLSSSLFTHSPTIPS--SNPHFSSAVHHKSLNVSPQNFNTPISFQQ 61

Query: 340 ILAAF---CKNGN--ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            L+ F   CK GN  A QA + F  +      P +SS+  + S L       +   + ++
Sbjct: 62  QLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQ 121

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   GI PD  T N L++CLC    V E + ++  +    + P +++Y  +I G C   R
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
           I+++  +   M + GC PN  TY  L++G+   G  + A++L   +++  ++    FK
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK 239


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 226/471 (47%), Gaps = 18/471 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   RA +  ++ + ++ M   G  P+V++   LI  F +    NKA+ + +++   G
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  YN LI G+CK  Q + A ++L  + S GF+ +  ++  +I  LCS  M +SA 
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +   ++L  N  P     T LI      G+  KA++L  +                  G+
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + +AF+  + +  RGC  D +SYN L+       K +E    + EM+ RGL+P+ 
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 564

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TYSILI  L    K E+A+      K  G+ PD Y+Y  +I   CK  R +   EF D 
Sbjct: 565 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 624

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S    P+ V YN ++ A+C++G    ALE+ E +   G  PN ++Y ++   +     
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  +G+EP+   Y +LI    + G + +   LL +M S    P  I+Y +
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +I G+ +   + E+  +L  M EKG  P+  TY   I G    G   EA +
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 217/468 (46%), Gaps = 18/468 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G++DE+  F E MV  G +P ++  + L+K   + ++   A  V++ + K G  P+V  Y
Sbjct: 298 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 357

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI  F +A  +  A ++ D + S+G S    TYN +I   C  G  ++A ++  ++L 
Sbjct: 358 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                   ++T +I         D A++ + EM                 G+CK G   +
Sbjct: 418 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 477

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +      ++G   D  + N LL  L   GK +E  ++  E++ RG   + V+Y+ LIS
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 537

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C   K ++A   L    ++GL PD Y+Y  LI       +++ AI+F D    +G LP
Sbjct: 538 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 597

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+  Y+ ++   CK    ++  E F+++      PN   YN +  A   SG    AL + 
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M  KGI P+  TY SLI  +     V+EA  L  +M      P V  Y  +I G+ K 
Sbjct: 658 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 717

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++ +   +L  M  K   PN+ TY ++I G    G   EA  L N +
Sbjct: 718 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 205/440 (46%), Gaps = 18/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           +   G  P    C  L+    +  +  K     +++ K   PDV+ +   I+ FCK  ++
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 265

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E A K+  ++   G +P+VVT+N +I  L   G  + AF   ++++    +PT+ITY+IL
Sbjct: 266 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 325

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           ++                  G+ +   +G A+  ++ +  +G  P+VI YN L+ + +  
Sbjct: 326 VK------------------GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 367

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   +  ++   M+S+GL     TY+ LI   C++G+ ++A  +L+     G   +  S+
Sbjct: 368 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             +I   C     D A+ F+  M+     P      T+++  CK+G   +ALE++ +  +
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 487

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   +  + N +   L  +G    A  +  E+L +G   D ++YN+LIS  C    +DE
Sbjct: 488 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 547

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A   L +M     +P   +Y+I+I G     ++ E+I+        G  P+  TY ++I+
Sbjct: 548 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 607

Query: 483 GIGYGGWRAEAMELANALVS 502
           G        E  E  + ++S
Sbjct: 608 GCCKAERTEEGQEFFDEMMS 627



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 57/411 (13%)

Query: 112 LISGFC---KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           LI  +C   K +   LA  V   L ++G  P   T NI++ SL      +   + FD + 
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 242

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V  +T  I A                   CK G V +A +    +E  G  P+
Sbjct: 243 K-GVSPDVYLFTTAINA------------------FCKGGKVEEAVKLFSKMEEAGVAPN 283

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+++N ++  L   G+++E      +M+ RG+EP ++TYSIL+  L R  +  DA  VL+
Sbjct: 284 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 343

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              +KG  P+   Y+ LI ++ + G L+ AIE  D M+S G       YNT++  +CKNG
Sbjct: 344 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 403

Query: 349 NADQALEIFEKLSDVGCPPNVSSY-----------------------------------N 373
            AD A  + +++  +G   N  S+                                    
Sbjct: 404 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 463

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ S L   G   +AL +  + L+KG   D  T N+L+  LC  G +DEA  +  ++   
Sbjct: 464 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 523

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                 +SYN +I G C  ++++E+   L  M ++G KP+  TY +LI G+
Sbjct: 524 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 574



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 269 ILISSLCRDGKTED---AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +LI   C   K +    A+DV      KG+ P   + + L+++  +        E  D +
Sbjct: 182 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-V 240

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+  + T + AFCK G  ++A+++F K+ + G  PNV ++NT+   L   G  
Sbjct: 241 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 300

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A     +M+ +G+EP  ITY+ L+  L R   + +A  +L +M    F P VI YN +
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I  F +   +N++IE+   M  KG     +TY  LI+G    G    A  L   ++S+
Sbjct: 361 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 418



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E R +            +  LIK      + +E+    E M   G +P+V   T
Sbjct: 649 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708

Query: 77  KLIKKFFQERKSNKAVRV----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
            LI  +    K  + V+V     E+  K   P+   Y  +I G+ +   +  A+++L+ +
Sbjct: 709 ALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           R +G  PD +TY   I     +G +  AFK  D+   +N    +  +  LIQ
Sbjct: 766 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNKLIQ 814


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 224/445 (50%), Gaps = 21/445 (4%)

Query: 55  ESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNA 111
           E+L  +  M  +G  C PDVV  + +I  FF+E   +K      E+L++   P+V  YN+
Sbjct: 69  EALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNS 128

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  CKA  ++ A +VL  +   G  PD +TYN ++   CS G  + A     ++  D 
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+TY  L+                    +CK G   +A +   S+  RG +P++ +
Sbjct: 189 VEPDVVTYNSLMDY------------------LCKNGRCTEARKIFDSMTKRGLKPEITT 230

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  LL+     G   E   L+  M+  G+ PN   +SIL+ +  +  K E+A+ V    +
Sbjct: 231 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 290

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++GL P+A +Y  +I   CK GR++ A+ + + MI +G  P  + YN+++   C     +
Sbjct: 291 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 350

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+  ++ D G   N   +N++  +    G  I +  +   M+  G++PD ITY++LI
Sbjct: 351 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 410

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C  G +DEA  LL  M S   +P  ++Y+ +I G+CK  R+ +++ +   M   G  
Sbjct: 411 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVS 470

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P+  TY ++++G+      A A EL
Sbjct: 471 PDIITYNIILQGLFQTRRTAAAKEL 495



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 205/412 (49%), Gaps = 19/412 (4%)

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMI 148
           A  V + L + G PDVF+YN L++G C  N+ + A ++L  +   G    PDVV+Y+ +I
Sbjct: 36  ARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI 95

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
                 G ++  +  ++++L     P V+TY  +I A       DKAM++L  M      
Sbjct: 96  NGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVM 155

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G C  G   +A  F++ + S G +PDV++YN L+  L   G+  E  K+
Sbjct: 156 PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI 215

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              M  RGL+P + TY  L+      G   +   +L      G+ P+ Y +  L+ AY K
Sbjct: 216 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAK 275

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
             +++ A+     M   G  P+ V Y  ++   CK+G  + A+  FE++ D G  P    
Sbjct: 276 QEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 335

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           YN++   L +     RA  +I EML +GI  + I +NS+I   C++G V E+  L   M 
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
               +P +I+Y+ +I G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLING 447



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 53/498 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+     P+VV    +I    + +  +KA+ V+  + 
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   YN+++ GFC + Q + A   L ++RS G  PDVVTYN ++  LC  G   
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEG---------------------------- 190
            A K+FD + +   KP + TY  L+Q    +G                            
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270

Query: 191 -------QTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQ 226
                  + ++AM +  +M                  +CK G V  A  +   +   G  
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P  I YN L+  L    KWE  E+L+ EM+ RG+  N + ++ +I S C++G+  ++  +
Sbjct: 331 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 390

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G+ PD  +Y  LI  YC  G++D A + L  M+S G  PD V Y+T++  +CK
Sbjct: 391 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCK 450

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                 AL +F ++   G  P++ +YN +   L+ +     A  +   +   G + +  T
Sbjct: 451 ISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELST 510

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN ++  LC++ + D+A+ +  ++     +    ++NI+I    K  R +E+ ++  A  
Sbjct: 511 YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 570

Query: 467 EKGCKPNETTYVLLIEGI 484
             G  PN  TY L+ E I
Sbjct: 571 SNGLVPNYWTYRLMAENI 588



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 21/364 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K +E++     M   G  P+ V    +I    +  +   A+   E +   G  P    YN
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +LI G C  N+ E A +++  +  RG   + + +N +I S C  G +  + K+FD ++R 
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             KP +ITY+ LI    L G+ D+A KLL  M                 G CK   +  A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               R +ES G  PD+I+YN++L+ L    +    ++L   +   G +  + TY+I++  
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++  T+DA+ + +      L  +A +++ +I A  K GR D A +      S+G +P+
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA---LG 390
              Y  +       G  ++  ++F  + D GC  +    N +   L   G+  RA   L 
Sbjct: 578 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 637

Query: 391 MISE 394
           MI E
Sbjct: 638 MIDE 641



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 18/243 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK DE+   + SMV+ G KPD V  + LI  + +  +   A+ +   +E  G  PD+  
Sbjct: 416 AGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIIT 475

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN ++ G  +  +   A ++   +   G   ++ TYNI++  LC   + + A ++F  L 
Sbjct: 476 YNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLC 535

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-- 214
             + K    T+ I+I A +  G+ D+A  L                 +  + ++GQ    
Sbjct: 536 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 595

Query: 215 ---QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
              Q   S+E  GC  D    N ++R LL  G+       ++ +  +       T S+ I
Sbjct: 596 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 655

Query: 272 SSL 274
             L
Sbjct: 656 DLL 658


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 225/457 (49%), Gaps = 31/457 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  E++  ++ M+ +G +P+ +    ++    +   +  A+ ++  +E
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 244

Query: 100 KYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +     P+V  YN +I G  K  +   A+ +   ++ +   PD+VTYN MI   C  G  
Sbjct: 245 EVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRW 304

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A ++  ++L     P V+T++ LI A + EG+  +A +L DEM               
Sbjct: 305 SDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM--------------- 349

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                R   P  ++Y+ ++       + +  E +     ++G  P+++T++ LI+  CR 
Sbjct: 350 ---LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRA 406

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + +D + +L    E GL  +  +Y  LI  +C+ G L+ A + L  MIS G  P++V  
Sbjct: 407 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTC 466

Query: 338 NTILAAFCKNGNADQALEIFEKLS----DV-------GCPPNVSSYNTMFSALWSSGDKI 386
           NT+L   C NG    ALE+F+ +     D+       G  P+V +YN +   L + G  +
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +  EM  +GI PD ITY+S+I  LC+   +DEA  +   M S  F P V+++N +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G+CK   +++ +E+   M ++G   +  TY+ LI G
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 236/515 (45%), Gaps = 69/515 (13%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            D+++     MV +   P V+   KL+    +  + +  + + + +E    P + +++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+  FC  +++  A     ++   GF P VVT+N ++  LC    I  A  +F Q+    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           CKP V+T+T L+     EG+  +A+ LLD M                 GMCK G    A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 215 QFVRSLES------------------------------------RGCQPDVISYNMLLRT 238
             +R +E                                     +   PD+++YN ++  
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G+W + E+L+ EM+ R + P+VVT+S LI++  ++GK  +A ++      + + P 
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  +I  +CK  RLD A        + GC PDI+ +NT++A +C+    D  +++  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++++ G   N  +Y T+       GD   A  ++ EM+S G+ P+ +T N+L+  LC +G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 419 MVDEAVGLLVDMESTRF-----------RPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            + +A+ +   M+ ++             P V +YNI+I G     +  E+ E+   M  
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +G  P+  TY  +I+G+       EA ++ +++ S
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 187/375 (49%), Gaps = 29/375 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++ ++   ++ M+     PDVV  + LI  F +E K  +A  +  E+L +   P    
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I GFCK N+++ A  +     ++G SPD++T+N +I   C    ++   K+  ++ 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                   ITYT LI      G  + A  LL EM                 G+C  G + 
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 212 QAFQFVRSLES-----------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            A +  ++++             G +PDV +YN+L+  L+N GK+ E E+L  EM  RG+
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ +TYS +I  LC+  + ++A  +  +   K  +PD  +++ LI+ YCK G +D  +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M   G + D + Y T++  F K  N D AL+IF+++   G  P+  +   M + LW
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 381 SSGDKIRALGMISEM 395
           S  +  RA+ M+ ++
Sbjct: 661 SKEELERAVAMLEDL 675



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAY 109
           GKF E+    E M   G  PD +  + +I    ++ + ++A ++ + +  K   PDV  +
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 582

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI+G+CKA  ++   ++   +  RG   D +TY  +I        I+ A  +F +++ 
Sbjct: 583 NTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMIS 642

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
               P  IT   ++     + + ++A+ +L+++ M
Sbjct: 643 SGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQM 677


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 226/471 (47%), Gaps = 18/471 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   RA +  ++ + ++ M   G  P+V++   LI  F +    NKA+ + +++   G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  YN LI G+CK  Q + A ++L  + S GF+ +  ++  +I  LCS  M +SA 
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +   ++L  N  P     T LI      G+  KA++L  +                  G+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + +AF+  + +  RGC  D +SYN L+       K +E    + EM+ RGL+P+ 
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TYSILI  L    K E+A+      K  G+ PD Y+Y  +I   CK  R +   EF D 
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S    P+ V YN ++ A+C++G    ALE+ E +   G  PN ++Y ++   +     
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  +G+EP+   Y +LI    + G + +   LL +M S    P  I+Y +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +I G+ +   + E+  +L  M EKG  P+  TY   I G    G   EA +
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 217/468 (46%), Gaps = 18/468 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G++DE+  F E MV  G +P ++  + L+K   + ++   A  V++ + K G  P+V  Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI  F +A  +  A ++ D + S+G S    TYN +I   C  G  ++A ++  ++L 
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                   ++T +I         D A++ + EM                 G+CK G   +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +      ++G   D  + N LL  L   GK +E  ++  E++ RG   + V+Y+ LIS
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C   K ++A   L    ++GL PD Y+Y  LI       +++ AI+F D    +G LP
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+  Y+ ++   CK    ++  E F+++      PN   YN +  A   SG    AL + 
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M  KGI P+  TY SLI  +     V+EA  L  +M      P V  Y  +I G+ K 
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++ +   +L  M  K   PN+ TY ++I G    G   EA  L N +
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 205/440 (46%), Gaps = 18/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           +   G  P    C  L+    +  +  K     +++ K   PDV+ +   I+ FCK  ++
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E A K+  ++   G +P+VVT+N +I  L   G  + AF   ++++    +PT+ITY+IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           ++                  G+ +   +G A+  ++ +  +G  P+VI YN L+ + +  
Sbjct: 337 VK------------------GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   +  ++   M+S+GL     TY+ LI   C++G+ ++A  +L+     G   +  S+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             +I   C     D A+ F+  M+     P      T+++  CK+G   +ALE++ +  +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   +  + N +   L  +G    A  +  E+L +G   D ++YN+LIS  C    +DE
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A   L +M     +P   +Y+I+I G     ++ E+I+        G  P+  TY ++I+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618

Query: 483 GIGYGGWRAEAMELANALVS 502
           G        E  E  + ++S
Sbjct: 619 GCCKAERTEEGQEFFDEMMS 638



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 57/411 (13%)

Query: 112 LISGFC---KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           LI  +C   K +   LA  V   L ++G  P   T NI++ SL      +   + FD + 
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V  +T  I A                   CK G V +A +    +E  G  P+
Sbjct: 254 K-GVSPDVYLFTTAINA------------------FCKGGKVEEAVKLFSKMEEAGVAPN 294

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+++N ++  L   G+++E      +M+ RG+EP ++TYSIL+  L R  +  DA  VL+
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              +KG  P+   Y+ LI ++ + G L+ AIE  D M+S G       YNT++  +CKNG
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414

Query: 349 NADQALEIFEKLSDVGCPPNVSSY-----------------------------------N 373
            AD A  + +++  +G   N  S+                                    
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ S L   G   +AL +  + L+KG   D  T N+L+  LC  G +DEA  +  ++   
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                 +SYN +I G C  ++++E+   L  M ++G KP+  TY +LI G+
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 269 ILISSLCRDGKTED---AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +LI   C   K +    A+DV      KG+ P   + + L+++  +        E  D +
Sbjct: 193 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-V 251

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+  + T + AFCK G  ++A+++F K+ + G  PNV ++NT+   L   G  
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A     +M+ +G+EP  ITY+ L+  L R   + +A  +L +M    F P VI YN +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I  F +   +N++IE+   M  KG     +TY  LI+G    G    A  L   ++S+
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E R +            +  LIK      + +E+    E M   G +P+V   T
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719

Query: 77  KLIKKFFQERKSNKAVRV----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
            LI  +    K  + V+V     E+  K   P+   Y  +I G+ +   +  A+++L+ +
Sbjct: 720 ALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           R +G  PD +TY   I     +G +  AFK  D+   +N    +  +  LIQ
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNKLIQ 825


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 234/484 (48%), Gaps = 28/484 (5%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL---EKYG--EPDVFAYNALIS 114
           +  M A GC P+      L+K    E +S +A+ ++  +   +  G   PDV +Y  +I+
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G  +  Q++ A  + D +  +G SP+ +TYN ++   CS G  + A  +F ++ RD  +P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
            V+TY  L+      G++ +A K+ D M                 G   +G + Q  Q +
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +   G QPD   +N+L+      G  +E     ++M  +GL PN+VTY  ++ +LCR 
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK +DA+        +GLTP+   +  LI   C   + D A E    MI  G  P+ + +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT+L   CK G   +A  IF+ +  V    +V +Y T+       G    A  ++  M+ 
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++P+E+TYN++I+  C++G +++A  L   M S    P ++ Y+ I+ G  +TRRI  
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAA 574

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           + E+   M + G K    TY ++++G+       +A+ +       H +    F   NRT
Sbjct: 575 AKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRM------FHNLCLIDFHLQNRT 628

Query: 518 FPLL 521
           F ++
Sbjct: 629 FNIM 632



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 232/487 (47%), Gaps = 57/487 (11%)

Query: 55  ESLYFIESMVAN----GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           ++L+ + +M+A+    GC PDVV  T +I    +E + +KA  +  E+L++   P+   Y
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITY 244

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G+C + + + A  +  ++   G  PDVVTYN ++  LC  G    A KVFD +++
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP    Y  L+     EG   +  +LLD M                    K GMV +
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDE 364

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGK---------------------------- 244
           A      +  +G  P++++Y  ++  L  +GK                            
Sbjct: 365 AMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIH 424

Query: 245 -------WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                  W++ E+L  EMI RG+ PN + ++ L++ LC++G    A ++        +  
Sbjct: 425 GLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQC 484

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  +Y  LI  YC DG++D A + L+ M+ DG  P+ V YNTI+  +CKNG  + A  +F
Sbjct: 485 DVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLF 544

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            +++  G  P +  Y+T+   L+ +     A  +   M+  GI+    TYN ++  LC++
Sbjct: 545 RQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQN 604

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
              D+A+ +  ++    F     ++NI+I    K  R +E+ ++ A++  +G  PN  TY
Sbjct: 605 NCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 664

Query: 478 VLLIEGI 484
            L+++ +
Sbjct: 665 WLMMKSL 671



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 216/460 (46%), Gaps = 24/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYG-EPDV 106
           RAG  D +   +  ++  G     +  + L+K    +++++ A+ + +  +   G  P+ 
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA 167

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSR----GFSPDVVTYNIMIGSLCSRGMIESAFK 162
           F+YN L+ G C  N+ + A  +L  + +     G  PDVV+Y  +I  L   G ++ A+ 
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +FD++L     P  ITY  L+                   G C  G   +A    R +  
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLH------------------GYCSSGKPKEAIGIFRKMCR 269

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G +PDV++YN L+  L   G+  E  K+   M+ +G +P+   Y  L+     +G    
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQ 329

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
              +L      G  PD Y ++ LI AY K G +D A+     M   G  P+IV Y T++ 
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A C+ G  D A+  F++L   G  PN   + T+   L +     +A  +  EM+ +GI P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + I +N+L++ LC++GMV  A  +   M     +  VI+Y  +I G+C   +++E+ ++L
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M   G KPNE TY  +I G    G   +A  L   + S
Sbjct: 510 EGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMAS 549



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 181/367 (49%), Gaps = 21/367 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D+ TY+I+IG     G ++ AF    +++R       IT++ L++    + +T  AM + 
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR- 258
                            +R + + GC P+  SYN+LL+ L +  + ++   L+  M++  
Sbjct: 155 -----------------LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197

Query: 259 ---GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G  P+VV+Y+ +I+ L R+G+ + A  +     ++G++P+  +Y+ L+  YC  G+ 
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             AI     M  DG  PD+V YNT++   CKNG + +A ++F+ +   G  P+ S Y T+
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                + G  ++   ++  M+  G +PD   +N LI    + GMVDEA+     M     
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P +++Y  ++   C+  ++++++     +  +G  PN   +  LI G+       +A E
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437

Query: 496 LANALVS 502
           LA  ++ 
Sbjct: 438 LAVEMIG 444



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 18/388 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +SMV  G KPD  +   L+  +  E    +  ++++++ + G +PD +
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  + K   ++ A     ++R +G  P++VTY  ++ +LC  G ++ A   FD+L
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P  + +  LI       + DKA +L  EM                  +CK+GMV
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A      +     Q DVI+Y  L+      GK +E  KL+  M+  G++PN VTY+ +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C++G+ EDA  + R    KG+ P    Y  ++    +  R+  A E   +MI  G 
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
              I  YN IL   C+N   D AL +F  L  +       ++N M  AL   G    A  
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDG 418
           + + +L++G+ P+ +TY  ++  L   G
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 142/281 (50%), Gaps = 5/281 (1%)

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           SL +R  + D+ +Y++++      G  +     +  +I  G     +T+S L+  LC D 
Sbjct: 86  SLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDK 145

Query: 279 KTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD----GCLPD 333
           +T DA+D+ LR     G TP+A+SY+ L+   C + R   A+  L  M++D    GC PD
Sbjct: 146 RTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPD 205

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V+Y T++    + G  D+A  +F+++ D G  PN  +YN +     SSG    A+G+  
Sbjct: 206 VVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFR 265

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M   G+EPD +TYN+L+  LC++G   EA  +   M     +P    Y  ++ G+    
Sbjct: 266 KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            + +  ++L  M   G +P+   + +LI      G   EAM
Sbjct: 326 YLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAM 366



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 191/420 (45%), Gaps = 23/420 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  DE++     M   G  P++V    ++    +  K + A+   + L 
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   +  LI G C  ++ + A ++   +  RG  P+ + +N ++  LC  GM+ 
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +FD ++R + +  VITYT LI    L+G+ D+A KLL+ M                
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G +  A    R + S+G  P ++ Y+ +L  L    +    ++L   MI  G++
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             + TY+I++  LC++  T+DA+ +              +++ +I A  K GR D A + 
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              +++ G +P++V Y  ++ +  + G  ++  ++F  L   GC  +    N +   L  
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQ 708

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G+  +A   +S++       +  T  SL+  L   G  D+ +  + +    ++RPT  S
Sbjct: 709 KGEVRKAGVYLSKIDENNFSLEASTAESLVF-LVSSGKYDQHINSIPE----KYRPTAKS 763



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E   +   + +R    ++ TYSI+I    R G  + A   L      G T  A ++ PL
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137

Query: 306 ISAYCKDGRLDLAIEF-LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL---- 360
           +   C D R   A++  L  M + GC P+  +YN +L   C    + QAL +   +    
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +  GCPP+V SY T+ + L   G   +A  +  EML +G+ P+ ITYN L+   C  G  
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA+G+   M      P V++YN +++  CK  R  E+ +V  +M +KG KP+ + Y  L
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 481 IEGIGYGGWRAEAMELANALV 501
           + G    G+  +  +L + +V
Sbjct: 318 LHGYATEGYLVQMHQLLDVMV 338



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N  L+ F ++   F  +I    + G+ DE+     S++A G  P+VV    ++K   ++ 
Sbjct: 616 NLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
              +   +   LEK G   D    NAL+    +  ++  A   L ++    FS +  T
Sbjct: 676 LLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEAST 733


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 215/434 (49%), Gaps = 18/434 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EPD F  N +I+ FC   Q+ LA   + ++   G+ P+ +T N ++  LC  G ++ A +
Sbjct: 90  EPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALR 149

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MC 205
             D++L    + + I+Y ILI      G+T  A++LL  +                  +C
Sbjct: 150 FHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC 209

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K  +V +A+     +  +G  PDV++Y++L+     +G+      L+ EM+   + P++ 
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIY 269

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+IL+ +LC++GK ++A +VL    +  +  D   Y  L+  YC    ++ A      M
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  PD+  Y+ ++   CK    D+AL +FE++      P+  +Y ++   L  SG  
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
                +  EML +G  PD ITYN+LI  LC++G +D A+ L   M+    RP V ++ I+
Sbjct: 390 SYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTIL 449

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           + G CK  R+  ++E    +  KG   N  TY ++I G+   G   EA+ L + +     
Sbjct: 450 LDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGC 509

Query: 506 ISRD-TFKRLNRTF 518
           IS   TF+ + R F
Sbjct: 510 ISDAVTFEIMIRAF 523



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 213/421 (50%), Gaps = 18/421 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +P+ +    L+K    E K  +A+R  + +L +       +Y  LI+G CK  +   A
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAA 182

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L R+      P+VV Y+++I  LC   +++ A+ ++ +++     P V+TY+IL+  
Sbjct: 183 IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSG 242

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             + GQ ++A+ LL+EM                  +CK+G V +A   +  +       D
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLD 302

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+ Y+ L+     + +    +++   M   G+ P+V  YSI+I+ LC+  + ++A+++  
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              +K + PD  +Y  LI   CK GR+    +  D M+  G  PD++ YN ++ A CKNG
Sbjct: 363 EIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNG 422

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + D+A+ +F K+ D    PNV ++  +   L   G    AL    ++L+KG   +  TY 
Sbjct: 423 HLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I+ LC++G++DEA+ L   ME        +++ I+I  F      +++ +++  M  +
Sbjct: 483 VMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542

Query: 469 G 469
           G
Sbjct: 543 G 543



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 186/403 (46%), Gaps = 53/403 (13%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK  E+L F + ++A G +   +    LI    +  ++  A+R++  +E++   P+V  Y
Sbjct: 142 GKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIY 201

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + +I   CK   ++ A  +   +  +G SPDVVTY+I++   C  G +  A  + ++++ 
Sbjct: 202 SMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL 261

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
           +N  P + TYTIL+ A   EG+  +A  +L  M                           
Sbjct: 262 ENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNN 321

Query: 203 -------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
                                    G+CK   V +A      +  +   PD ++Y  L+ 
Sbjct: 322 AKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLID 381

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L   G+      L  EM+ RG  P+V+TY+ LI +LC++G  + A+ +    K++ + P
Sbjct: 382 CLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRP 441

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           + Y++  L+   CK GRL  A+EF   +++ G   ++  Y  ++   CK G  D+AL + 
Sbjct: 442 NVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQ 501

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
            ++ D GC  +  ++  M  A +   +  +A  ++ EM+++G+
Sbjct: 502 SRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G+ + ++  +  MV     PD+   T L+    +E K  +A  V+ ++ K     DV  
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+ G+C  N++  A +V   +   G +PDV  Y+IMI  LC    ++ A  +F+++ 
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           + N  P  +TYT LI      G+      L DEM                  +CK G + 
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD 425

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      ++ +  +P+V ++ +LL  L  +G+ +   +   +++++G   NV TY+++I
Sbjct: 426 RAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMI 485

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC++G  ++A+ +    ++ G   DA +++ +I A+      D A + +  MI+ G L
Sbjct: 486 NGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 137/284 (48%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    + +E    +PD  + N+++    + G+       +++++  G +PN +T + L+ 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC +GK ++A+        +G      SY  LI+  CK G    AI  L  +      P
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V Y+ I+   CK+   D+A +++ ++   G  P+V +Y+ + S     G   RA+ ++
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           +EM+ + I PD  TY  L+  LC++G V EA  +L  M        V+ Y+ ++ G+C  
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +N +  V   M + G  P+   Y ++I G+       EA+ L
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNL 360



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 123/257 (47%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P    +N +L +L+N+ ++     L  +M    +EP+  T +I+I+  C  G+   A   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    + G  P+  + + L+   C +G++  A+ F D +++ G     ++Y  ++   CK
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A+ +  ++      PNV  Y+ +   L        A  + +EM+ KGI PD +T
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L+S  C  G ++ A+ LL +M      P + +Y I++   CK  ++ E+  VLA M 
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 467 EKGCKPNETTYVLLIEG 483
           +     +   Y  L++G
Sbjct: 296 KACVNLDVVVYSTLMDG 312



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 120/240 (50%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+   ++ ++ SL    +   A+ + +  +   + PD ++ + +I+ +C  G++ LA   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +  ++  G  P+ +  NT++   C  G   +AL   +K+   G   +  SY  + + +  
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G+   A+ ++  +    I P+ + Y+ +I  LC+D +VDEA  L  +M      P V++
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y+I++ GFC   ++N +I++L  M  +   P+  TY +L++ +   G   EA  +   +V
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 2/240 (0%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+  +S  +  L  +   +DAV           TP  + ++ ++ +     R   AI  
Sbjct: 23  PNLCFHSHSLPPLTHNA--DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISL 80

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M      PD    N I+  FC  G    A     K+  +G  PN  + NT+   L  
Sbjct: 81  YKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCL 140

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    AL    ++L++G     I+Y  LI+ +C+ G    A+ LL  +E    RP V+ 
Sbjct: 141 EGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI 200

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y++II   CK   ++E+ ++   M  KG  P+  TY +L+ G    G    A++L N +V
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 228/451 (50%), Gaps = 23/451 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  +I    +AG+ D++   ++ M   G K DV++ + LI+   ++ + ++A+   +
Sbjct: 111 EIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFK 170

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR-----GFSPDVVTYNIMIGSL 151
            + +   P+V  YN +++G CKAN+I+ A ++ D +  R     G  PDV++Y+ +I +L
Sbjct: 171 SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    ++ A++ F ++    C P V+TY+ LI                   G+CK     
Sbjct: 231 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLID------------------GLCKVDRPS 272

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +  + +  ++ +G   ++I +N +L  L    + E+  +    ++  G +PNVVTY++ +
Sbjct: 273 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 332

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC+ G+ ++A  +L    E  +TPD  +Y  +I  +CK GR+D A +    M+   C+
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  V + T+L  F ++  + +A  + E + + G  P + +YN +   +  +     AL +
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +M  K  +PD  TY  LI CLCR   VDEA   L  ME+    P     + ++   CK
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
              ++E+  VL  + E GC+P   T+ +L+E
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKILVE 543



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 224/482 (46%), Gaps = 36/482 (7%)

Query: 49  RAGKFDESLYFIESM-----VANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG- 102
           +A + DE+L   + M      ++GC+PDV+  + +I    + ++ +KA    + +   G 
Sbjct: 192 KANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGC 251

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+V  Y++LI G CK ++     ++L  ++ +GF  +++ +N M+ +L      E A +
Sbjct: 252 APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 311

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
            F++LL+   KP V+TY + +      G+ D+A ++L EM                 G C
Sbjct: 312 FFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFC 371

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A      +    C P  +++  LL       K  E  ++  +M++ G  P + 
Sbjct: 372 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 431

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY++L+  +C     E A+++    K K   PD  +Y PLI   C+  R+D A EFLD M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL-----W 380
            +D  +P+    + ++   CK G  D+A  + + + +VGC P   ++  +   L     W
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +  K+        + S G   D  TY+  ++ +C+ G  DEAV ++  M     RP   
Sbjct: 552 EAASKL--------LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEG 603

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y  ++   C   R+  +I     M  +GC P   TY LLI          EA  +  A+
Sbjct: 604 TYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663

Query: 501 VS 502
           V+
Sbjct: 664 VA 665



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 231/478 (48%), Gaps = 30/478 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G + +   C  L+  F + ++  +A R++ E LE    P+   Y  +I+GFCKA Q++ A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++LD ++ RG   DV+ ++ +I  LC +G I+ A + F  +  + C P VITY  ++  
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189

Query: 186 TMLEGQTDKAMKLLDEM----------------------GMCKKGMVGQAFQFVRSLESR 223
                + D+A++L D+M                       +CK   V +A+++ + + + 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC P+V++Y+ L+  L  + +  E  +L+  M  +G   N++ ++ ++ +L ++ + E A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
                   + G  P+  +Y+  +   CK GR+D A   L  M+     PD++ Y++I+  
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FCK G  D+A ++F ++    C P+  ++ T+            A  +  +M++ G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYN L+ C+C    V+ A+ +   M+  + +P   +Y  +I   C+ RR++E+ E L 
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLD 489

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
            M      PN      L+E +   G   EA  + + +V +        + L  TF +L
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC------QPLGETFKIL 541



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 56/405 (13%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    F  ++   ++  + +++  F E ++ +G KP+VV     +    +  + ++A
Sbjct: 285 GFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA 344

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL------------------ 132
            R++ E++E    PDV  Y+++I GFCKA +++ A+ V  R+                  
Sbjct: 345 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 404

Query: 133 -----RSR------------GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
                +SR            GF P + TYN+++  +C    +ESA +++ ++ R   +P 
Sbjct: 405 FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPD 464

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVR 218
             TY  LIQ      + D+A + LD M                  +CK+G V +A   + 
Sbjct: 465 CNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD 524

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           ++   GCQP   ++ +L+  L    KWE   KL+    S G   +  TYS+ ++ +C+ G
Sbjct: 525 NVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAG 581

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++AV+V+     KG+ PD  +Y  ++ + C   R++ AI   + M S GC P +V Y 
Sbjct: 582 KPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYT 641

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            ++   C    AD+A  IFE +   G  P   +  T+ S L  +G
Sbjct: 642 LLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 6/213 (2%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A  + G   +AY+   L++A+ K  R + A   L   +   C P+ + Y T++  FCK G
Sbjct: 66  AGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAG 125

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             DQA E+ +++ + G   +V  ++T+   L   G    AL     M  +   P+ ITYN
Sbjct: 126 QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYN 184

Query: 409 SLISCLCRDGMVDEAVGLLVDME-----STRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           ++++ LC+   +DEA+ L  DME     S    P VISY+ +I   CK +R++++ E   
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M   GC PN  TY  LI+G+      +E +EL
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 50/321 (15%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG------ 102
           +AG+ D++      M+ + C P  V    L+  F + +KS +A RV E +   G      
Sbjct: 372 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 431

Query: 103 ------------------------------EPDVFAYNALISGFCKANQIELANKVLDRL 132
                                         +PD   Y  LI   C+A +++ A + LD +
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
            +    P+    + ++  LC +G ++ A  V D ++   C+P   T+ IL++   L  + 
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 193 DKAMKLLDEMG--------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           + A KLL   G              +CK G   +A + +  +  +G +PD  +Y  +LR+
Sbjct: 552 EAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L  + + E       +M SRG  P +VTY++LI   C     ++A  +  A    G TP 
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQ 671

Query: 299 AYSYDPLISAYCKDGRLDLAI 319
           A +   L S     G  DL +
Sbjct: 672 AQTMRTLSSCLRDAGYQDLLV 692


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 243/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C PDVV  + +I  FF+E   NKA  +  E++++   P
Sbjct: 197 KSGQADDLL----RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   Y++++   CKA  ++ A   L ++ ++G  P+  TYN +I    S G  + A +VF
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE--- 221
            ++ R +  P V+T ++L+ +    G+  +A  + D M M  KG     F +   L    
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM--KGQNPNVFSYTIMLNGYA 370

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 PD+ ++N+L++   N G  ++   +  EM   G++P+VV
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  +I++LCR GK +DA++      ++G+ PD Y+Y  LI  +C  G L  A E +  +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P    Y+ +       G  
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+++ Y +L++  C+ G +DE + L  +M     +P+ I YNII
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G  +  R   +      M E G   N+ TY +++ G+       EA+ L   L +M+
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 236/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV  G  P+      LI  +    +  +AVRV + + ++   PDV 
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L+   CK  +I+ A  V D +  +G +P+V +Y IM+    ++G +     +FD +
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM 385

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P + T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 386 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +Y+ L++     G   + ++L++E+++ G+  ++V +S +
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL P A  Y  L+  YC  G+++ A+   D M+S G 
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V Y T++  +CK G  D+ L +F ++   G  P+   YN +   L+ +G  + A  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  ++ TYN ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++   G  P   TY ++I  +   G   EA ++ +++
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 222/459 (48%), Gaps = 22/459 (4%)

Query: 42  KLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
            L+K    A + DE+L   +      GC PDV   + L+K    + KS +A  ++ ++ +
Sbjct: 151 HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210

Query: 101 YG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            G    PDV AY+ +I GF K   +  A  +   +  RG  PD VTY+ ++ +LC    +
Sbjct: 211 GGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAM 270

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A     Q++     P   TY  LI      GQ  +A+++  EM               
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--------------- 315

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
                    PDV++ +ML+ +L   GK +E   +   M  +G  PNV +Y+I+++     
Sbjct: 316 ---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATK 372

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G   D  D+       G+ PD Y+++ LI AY   G LD A+   + M   G  PD+V Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++AA C+ G  D A+E F ++ D G  P+  +Y+ +     + G  ++A  +ISE+++
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+  D + ++S+I+ LC+ G V +A  +     +    PT + Y++++ G+C   ++ +
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++ V  AM   G +PN+  Y  L+ G    G   E + L
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSL 591



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 233/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + ++++   L+K F + +++++A+ ++  L +  E    P
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL--LHRTPELGCVP 180

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SPDVV Y+ +I      G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD 240

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P  +TY+ ++ A                  +CK   + +A  F+R + +
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHA------------------LCKARAMDKAEAFLRQMVN 282

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  P+  +YN L+    + G+W+E  ++  EM    + P+VVT S+L+ SLC+ GK ++
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  P+ +SY  +++ Y   G L    +  D M+ DG  PDI  +N ++ 
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 402

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  Y+ LI   C  G + +A  L+ ++ +      ++ ++ II   CK  R+ ++  + 
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P    Y +L++G    G   +A+ + +A+VS
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 215/441 (48%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M  +   PDVV  + L+    +  K  +A  V + +   G+ P+VF+Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             +++G+     +     + D +   G +PD+ T+N++I +  + GM++ A  +F+++  
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TY  +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G   D++ ++ ++  L  +G+  + + +    ++ GL P  V YS+L+ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + YN I+    + G    A   F ++++ G   N  +YN +   L+ +     A+ + 
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLF 662

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ + IT N++I+ + +   V+EA  L   +  +   P V++Y+I+I    K 
Sbjct: 663 KELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKE 722

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+P+
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPD 743



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 198/410 (48%), Gaps = 25/410 (6%)

Query: 119 ANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDNCKPTV 176
           A  + L N+   R +  R  SP   TY I++   C+R    E A   F QLLR   +  +
Sbjct: 88  ALAVALFNRAASRAQGPRVLSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNI 146

Query: 177 ITYTILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVR 218
           I    L++      +TD+A+ +L     E+G              +C +G  GQA   +R
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206

Query: 219 SLESRG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            +   G  C PDV++Y+ ++      G   +   L  EM+ RG+ P+ VTYS ++ +LC+
Sbjct: 207 MMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK 266

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
               + A   LR    KG+ P+ ++Y+ LI  Y   G+   A+     M     LPD+V 
Sbjct: 267 ARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 326

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            + ++ + CK G   +A ++F+ ++  G  PNV SY  M +   + G  +    +   ML
Sbjct: 327 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLML 386

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             GI PD  T+N LI      GM+D+A+ +  +M     +P V++Y  +I   C+  +++
Sbjct: 387 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--MH 504
           +++E    M ++G  P++  Y  LI+G    G   +A EL + +++  MH
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 204/452 (45%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    ++M   G  P+V   T ++  +  +        + +++   G  PD++
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  +     ++ A  + + +R  G  PDVVTY  +I +LC  G ++ A + F+Q+
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P    Y  LIQ     G   KA +L+ E+                  +CK G V
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A        + G  P  + Y+ML+     +GK E+  ++   M+S G+EPN V Y  L
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C+ G+ ++ + + R   +KG+ P    Y+ +I    + GR   A      M   G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +   YN +L    KN   D+A+ +F++L  +    N+ + NTM + ++ +     A  
Sbjct: 636 AMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKD 695

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + +   G+ P  +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 755

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K   I  +   L+ + E+       T +LL++
Sbjct: 756 KKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 195/429 (45%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KPDVV    +I    +  K + A+ +  +++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AY+ LI GFC    +  A +++  + + G   D+V ++ +I +LC  G + 
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     PT + Y++L+    L G+ +KA+++ D M                
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM---------------- 560

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+ + Y  L+     +G+ +EG  L  EM+ +G++P+ + Y+I+I  L   G
Sbjct: 561 --VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  +  +Y+ ++    K+   D AI     + +     +I+  N
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++A   +    ++A ++F  +S  G  P V +Y+ M + L   G    A  M S M + 
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EPD    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREH 798

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 799 IRFLPAKYH 807



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 148/300 (49%), Gaps = 9/300 (3%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVIS-----YNMLLRTLLNMGKWEEGEKLMTEMISRG 259
           C+ G       F R+  SR   P V+S     Y +L+       + E       +++  G
Sbjct: 83  CRSGPALAVALFNRA-ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 141

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           L  N++  + L+   C   +T++A+D+ L    E G  PD +SY  L+ + C  G+   A
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201

Query: 319 IEFLDYMISDG--CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            + L  M   G  C PD+V Y+T++  F K G+ ++A ++F+++   G PP+  +Y+++ 
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  +    +A   + +M++KG+ P+  TYN+LI      G   EAV +  +M      
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V++ ++++   CK  +I E+ +V   M  KG  PN  +Y +++ G    G   +  +L
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDL 381



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 15/268 (5%)

Query: 244 KWEEGEKLMTEMISRG---LEPNVVTYSILI-----SSLCRDGKTEDAVDVLRAAKE--- 292
           + EE   L+ E+  RG   LE ++  +   +     S+ CR G         RAA     
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 103

Query: 293 -KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + L+P +++Y  L+    +  R +LA+ F   ++  G   +I+  N +L  FC+    D
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTD 163

Query: 352 QALEI-FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI--EPDEITYN 408
           +AL+I   +  ++GC P+V SY+ +  +L   G   +A  ++  M   G    PD + Y+
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++I    ++G V++A  L  +M      P  ++Y+ ++   CK R ++++   L  M  K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G  PN  TY  LI G    G   EA+ +
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRV 311


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK S R  +FD++   +  M   G  PDV     LI    +    + A+++  E+ E+ 
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF K   I  A+++ +RL +     P++ +YN+MI  LC  G  + +
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           F+++ ++ ++     + TY+ LI      G  D A ++  EM                 G
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             + G + +  +  + +E  GC+  V+SYN+L+R L    K +E   +   +  +    +
Sbjct: 335 YLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +TY +L+  LC++G    A+ +L  A+      D ++Y  +I+  C++GRLD     LD
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   GC P+    N ++  F +    + AL  F  +   GC P V +YNT+ + L  + 
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  ++ EML KG +P+ ITY+ L++ LC+   +D A+ L        F+P V  +N
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           III G C + ++ +++++ + M ++ C PN  T+  L+EG 
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 209/437 (47%), Gaps = 25/437 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P +     L+    +  K ++A       E  G  P++  YN LI   C+  Q + A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L+ +  +GFSPDV +Y  +I SL   G +  A K+FD++      P V  Y ILI  
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID- 227

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                            G  KKG +  A + + R L+     P++ SYN+++  L   GK
Sbjct: 228 -----------------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           ++E  ++   M       ++ TYS LI  LC  G  + A  V +   E G++PD   Y+ 
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++ Y + GR++  +E    M  +GC   +V+YN ++    +N   D+A+ I+E L +  
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 389

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  +  +Y  +   L  +G   +AL ++ E  +   + D   Y+S+I+ LCR+G +DE  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 449

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G+L  M     +P     N +I GF +  ++ +++     M  KGC P   TY  LI G+
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509

Query: 485 GYGGWRAEAMELANALV 501
                +AE    A ALV
Sbjct: 510 S----KAERFSEAYALV 522



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 234/476 (49%), Gaps = 20/476 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     + K+DE+  F       G  P++     LIK   ++++ +KA  ++  + 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PDVF+Y  LI+   K   +  A K+ D +  RG +PDV  YNI+I     +G I 
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 159 SAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +A +++++LL+  +  P + +Y ++I      G+ D++ ++   M               
Sbjct: 237 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G +  A +  + +   G  PDV+ YN +L   L  G+ EE  +L   M   G 
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
              VV+Y+ILI  L  + K ++A+ +     EK    D+ +Y  L+   CK+G L+ A+ 
Sbjct: 357 R-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+   +     D   Y++++   C+ G  D+   + ++++  GC PN    N + +   
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     AL     M+SKG  P  +TYN+LI+ L +     EA  L+ +M    ++P +I
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +Y++++ G C+ ++++ ++ +     EKG KP+   + ++I G+   G   +A++L
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 233/508 (45%), Gaps = 35/508 (6%)

Query: 10  PKSNERVRVSS--SAETRPNTHLLSFDV---------KETQFMKLIKRSFRAGKFDESLY 58
           PKS    RV     +E  P++ L  FD              F  ++KR F          
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 59  FIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYG-EPDVFAYNALISG 115
            +E +    CK P+ V  T +IK + +    ++A+ + + + E +G +P + +YN+L++ 
Sbjct: 65  IVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
             ++N+ + A        + G SP++ TYNI+I   C +   + A ++ + +      P 
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           V +Y  LI +    G    A+KL DEM                    RG  PDV  YN+L
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEM------------------PERGVTPDVACYNIL 225

Query: 236 LRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +      G      ++   ++    + PN+ +Y+++I+ LC+ GK +++ ++    K+  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D Y+Y  LI   C  G LD A      M  +G  PD+V YNT+L  + + G  ++ L
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+++ +   GC   V SYN +   L+ +     A+ +   +  K    D +TY  L+  L
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C++G +++A+ +L + E+ R      +Y+ +I G C+  R++E   VL  M + GCKPN 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
                +I G        +A+     +VS
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVS 492



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 165/328 (50%), Gaps = 17/328 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           +G  D +    + M  NG  PDVV+   ++  + +  +  + + + +++EK G   V +Y
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI G  +  +++ A  + + L  +    D +TY +++  LC  G +  A  + ++   
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                    Y+ +I     EG+ D+   +LD+M                 G  +   +  
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +F  ++ S+GC P V++YN L+  L    ++ E   L+ EM+ +G +PN++TYS+L++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+  K + A+++   A EKG  PD   ++ +I   C  G+++ A++    M    C+P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKL 360
           ++V +NT++  F K  + ++A +I++ +
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 136/285 (47%), Gaps = 19/285 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-Y 101
           LI+  F   K DE++   E +    C  D +    L+    +    NKA+ ++E  E   
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           G+ D FAY+++I+G C+  +++    VLD++   G  P+    N +I        +E A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           + F  ++   C PTV+TY  LI                   G+ K     +A+  V+ + 
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLIN------------------GLSKAERFSEAYALVKEML 526

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G +P++I+Y++L+  L    K +    L  + + +G +P+V  ++I+I  LC  GK E
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVE 586

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           DA+ +    K++   P+  +++ L+  + K    + A +  D+++
Sbjct: 587 DALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 19/224 (8%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    R G+ DE    ++ M  +GCKP+  +C  +I  F +  K   A+R
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 94  VM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               ++ K   P V  YN LI+G  KA +   A  ++  +  +G+ P+++TY++++  LC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
               ++ A  ++ Q L    KP V  + I+I                   G+C  G V  
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIH------------------GLCSSGKVED 587

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
           A Q    ++ R C P+++++N L+     +  +E   K+   ++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    +A +F E+   ++ M+  G KP+++  + L+    Q +K + A+ +  + L
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  +PDV  +N +I G C + ++E A ++   ++ R   P++VT+N ++         E
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621

Query: 159 SAFKVFDQLLR 169
            A K++D +L+
Sbjct: 622 RASKIWDHILQ 632


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 229/482 (47%), Gaps = 23/482 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    R G  +++L     +   GC+P V +   L+     E +      +  
Sbjct: 114 EDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYS 173

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++ G EP+V+ YN L+   CK N+++ A K+L  + ++G  PDVV+Y  +I S+   G
Sbjct: 174 NMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLG 233

Query: 156 MIESA----------FKVFDQLLRDNCKPTVITYTILIQATMLEGQTD-------KAMKL 198
            +E A            V++ L+   C+   +    L+   M+E   D         +  
Sbjct: 234 KVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           L  +G  +  +   A  FVR     GC P+V ++  L++     G+  E   +   M   
Sbjct: 294 LSGIGNVELALAVWAKMFVR-----GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE 348

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G EPNVV Y+ LI  LC  GK  +AV V    +  G +P+  +Y  LI  + K G L  A
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  + M+++GC+P++V Y +++   C++    QA  + EK+S   CPPN  ++NT    
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG    A+ +  +M   G  P+  TYN ++  L ++  + EA+ L+ +ME       
Sbjct: 469 LCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELN 528

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN I  GFC   +  E++++L  M   G KP+  TY  L       G    A++L +
Sbjct: 529 LVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLD 588

Query: 499 AL 500
            L
Sbjct: 589 KL 590



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 204/460 (44%), Gaps = 57/460 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +   +  M   GC+PDVV  T +I       K  K     E+  ++ 
Sbjct: 190 LLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSM---SKLGKVEEARELSIRF- 245

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P+V  YNALI+GFC+  +++    +L ++  +G  P+V+TY+ +I SL   G +E A  
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V+ ++    C P V T+T L++   + G+  +A+ + + M                 G+C
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLC 365

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G +G+A      +E  GC P+V +Y  L+      G      ++  +M++ G  PNVV
Sbjct: 366 SHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVV 425

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ +++ LCR      A  ++         P+  +++  I   C  GR++ AI     M
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+I  YN +L    K     +ALE+  ++ + G   N+ +YNT+F    + G  
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGM-------------------------- 419
             AL ++ +ML  G++PD ITYN+L    C  G                           
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTS 605

Query: 420 ----------VDEAVGLLVDMESTRFRPTVISYNIIILGF 449
                     V+EAV  L  M +        ++N ++ G 
Sbjct: 606 LLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 22/347 (6%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGM----CKK-------------GMVGQAFQ 215
           + T +TY I+I+    E   D    LL +M +    C +             G+  QA +
Sbjct: 76  QHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALK 135

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +   GCQP V  YN LL  +L+  +++  E + + M   G EPNV TY+IL+ +LC
Sbjct: 136 MFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC 195

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++ + + A  +L     KG  PD  SY  +IS+  K G+++ A E     +S    P++ 
Sbjct: 196 KNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQPNVS 250

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN ++  FC+     +   +  ++ + G  PNV +Y+T+ S+L   G+   AL + ++M
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G  P+  T+ SL+      G V EA+ +   M    F P V++YN +I G C   ++
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E++ V + M   GC PN +TY  LI+G    G    A E+ N +++
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 8/232 (3%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+  +   +TY I+I  L R+   +    +L+  K +G++     +  +I+ Y + G  +
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    +   GC P +  YN +L A            I+  +   G  PNV +YN + 
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  +     A  ++ EM +KG EPD ++Y ++IS + + G V+EA  L     S RF+
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQ 246

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI---EGIG 485
           P V  YN +I GFC+  ++ E   +L  M EKG  PN  TY  +I    GIG
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIG 298


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 220/444 (49%), Gaps = 18/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F K++    + G   E+   +  ++  G   ++      I+   +  +  +AVR+++ + 
Sbjct: 192 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 251

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y  PDV  YN LI G CK +  + A   L R+ ++G  PD  TYN +I   C   M++ 
Sbjct: 252 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 311

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++    +     P  +TY  LI     EG  ++A++L +E                  
Sbjct: 312 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA----------------- 354

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +++G +PD++ YN L++ L   G      ++M EM   G  P++ TY+I+I+ LC+ G 
Sbjct: 355 -QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 413

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA  V+  A  KG  PD ++++ LI  YCK  +LD A++ ++ M   G  PD + YN+
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L   CK G  ++  E F+++   GC PN  +YN +      S     A  +I +M  +G
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD +++N+LI   CR+G ++ A  L   +E   +  T  ++N +I  F     ++ + 
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 593

Query: 460 EVLAAMFEKGCKPNETTYVLLIEG 483
           ++   M  KG + +  TY +LI+G
Sbjct: 594 KIFDEMLSKGHRADSYTYRVLIDG 617



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 20/486 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           A   D++      M+A G  PD+   T  ++ F    + + A+R++  L   G     AY
Sbjct: 101 AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAY 157

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++ G         A ++ D++      P++  +N ++ +LC RG +  A  +  ++++
Sbjct: 158 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 217

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQA 213
                 + TY I I+     G+  +A++L+D M                G+CKK M  +A
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 277

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
             ++R + ++GC PD  +YN ++     +   +E  +L+ + + +G  P+ VTY  LI+ 
Sbjct: 278 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 337

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC +G  E A+++   A+ KG+ PD   Y+ L+   C  G +  A++ ++ M  +GC PD
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  YN ++   CK GN   A  +       G  P+V ++NT+            AL ++ 
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M   GI PD ITYNS+++ LC+ G V+E      +M      P  I+YNI+I  FC++ 
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HAISRDTFK 512
           ++ E+ +V+  M ++G  P+  ++  LI G    G    A  L   L    ++ + DTF 
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577

Query: 513 RLNRTF 518
            L   F
Sbjct: 578 TLIGAF 583



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 225/455 (49%), Gaps = 20/455 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+  E++  ++ M A    PDVV    LI+   ++    +A+  +  +   G  PD F 
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I G+CK + ++ A ++L     +GF PD VTY  +I  LC+ G +E A ++F++  
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               KP ++ Y  L++                  G+C +G++  A Q +  +   GC PD
Sbjct: 356 AKGIKPDIVVYNSLVK------------------GLCLQGLILHALQVMNEMAEEGCHPD 397

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +YN+++  L  MG   +   +M + I +G  P+V T++ LI   C+  K + A+ ++ 
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G+ PD  +Y+ +++  CK G+++   E    MI  GC P+ + YN ++  FC++ 
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A ++  K+S  G  P+  S+NT+      +GD   A  +  ++  KG      T+N
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI        +  A  +  +M S   R    +Y ++I G CKT  ++ +   L  M +K
Sbjct: 578 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK 637

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           G  P+ +T+  +I  +       +A+ + + +V +
Sbjct: 638 GFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 672



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 222/472 (47%), Gaps = 54/472 (11%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I+ + +  +   AV   E ++ +   P   AYNA++     A   + A+KV  R+ + G 
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 138 SPDVVTYNIMIGSLC-------------------------------SRGMIESAFKVFDQ 166
           SPD+ T+ I + S C                               + G    A ++FDQ
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 179

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +L  +  P +  +  ++ A    G   +A  LL ++                 G+C+ G 
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 239

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + +    PDV++YN L+R L      +E    +  M+++G  P+  TY+ 
Sbjct: 240 LPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 298

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I   C+    ++A ++L+ A  KG  PD  +Y  LI+  C +G ++ A+E  +   + G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PDIV YN+++   C  G    AL++  ++++ GC P++ +YN + + L   G+   A 
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++++ + KG  PD  T+N+LI   C+   +D A+ L+  M      P  I+YN ++ G 
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK  ++NE  E    M  KGC PN  TY +LIE       R+  ME A+ ++
Sbjct: 479 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENF----CRSNKMEEASKVI 526



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 14/388 (3%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y A I  + +A ++  A    +R+      P    YN ++ +L      + A KV+ ++L
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQ 215
                P + T+TI +++  L  +   A++LL  +             G+   G    A Q
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +      P++ ++N +L  L   G   E   L+ ++I RG+  N+ TY+I I  LC
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+  +AV ++   +   + PD  +Y+ LI   CK      A+ +L  M++ GCLPD  
Sbjct: 236 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+  +CK     +A E+ +     G  P+  +Y ++ + L + GD  RAL + +E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            +KGI+PD + YNSL+  LC  G++  A+ ++ +M      P + +YNI+I G CK   I
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +++  V+     KG  P+  T+  LI+G
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDG 442



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 19/375 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F   +  +  LI      G  + +L       A G KPD+V+   L+K    +     A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           ++VM E+ E+   PD+  YN +I+G CK   I  A  V++    +G+ PDV T+N +I  
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C R  ++SA ++ +++      P  ITY  ++                   G+CK G V
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN------------------GLCKAGKV 484

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +  +  + +  +GC P+ I+YN+L+       K EE  K++ +M   GL P+ V+++ L
Sbjct: 485 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   CR+G  E A  + +  +EKG +  A +++ LI A+     + +A +  D M+S G 
Sbjct: 545 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 604

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             D   Y  ++   CK  N D+A     ++   G  P++S++  + ++L  +    +A+G
Sbjct: 605 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 664

Query: 391 MISEMLSKGIEPDEI 405
           +I  M+  G+ P+ +
Sbjct: 665 IIHIMVKIGVVPEVV 679


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK S R  +FD++   +  M   G  PDV     LI    +    + A+++  E+ E+ 
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF K   I  A+++ +RL +     P++ +YN+MI  LC  G  + +
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           F+++ ++ ++     + TY+ LI      G  D A ++  EM                 G
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             + G + +  +  + +E  GC+  V+SYN+L+R L    K +E   +   +  +    +
Sbjct: 335 YLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +TY +L+  LC++G    A+ +L  A+      D ++Y  +I+  C++GRLD     LD
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   GC P+    N ++  F +    + AL  F  +   GC P V +YNT+ + L  + 
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  ++ EML KG +P+ ITY+ L++ LC+   +D A+ L        F+P V  +N
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           III G C + ++ +++++ + M ++ C PN  T+  L+EG 
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 209/437 (47%), Gaps = 25/437 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P +     L+    +  K ++A       E  G  P++  YN LI   C+  Q + A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L+ +  +GFSPDV +Y  +I SL   G +  A K+FD++      P V  Y ILI  
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID- 227

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                            G  KKG +  A + + R L+     P++ SYN+++  L   GK
Sbjct: 228 -----------------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           ++E  ++   M       ++ TYS LI  LC  G  + A  V +   E G++PD   Y+ 
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++ Y + GR++  +E    M  +GC   +V+YN ++    +N   D+A+ I+E L +  
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 389

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  +  +Y  +   L  +G   +AL ++ E  +   + D   Y+S+I+ LCR+G +DE  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 449

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           G+L  M     +P     N +I GF +  ++ +++     M  KGC P   TY  LI G+
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509

Query: 485 GYGGWRAEAMELANALV 501
                +AE    A ALV
Sbjct: 510 S----KAERFSEAYALV 522



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 234/476 (49%), Gaps = 20/476 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     + K+DE+  F       G  P++     LIK   ++++ +KA  ++  + 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PDVF+Y  LI+   K   +  A K+ D +  RG +PDV  YNI+I     +G I 
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236

Query: 159 SAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           +A +++++LL+  +  P + +Y ++I      G+ D++ ++   M               
Sbjct: 237 NASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C  G +  A +  + +   G  PDV+ YN +L   L  G+ EE  +L   M   G 
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
              VV+Y+ILI  L  + K ++A+ +     EK    D+ +Y  L+   CK+G L+ A+ 
Sbjct: 357 R-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L+   +     D   Y++++   C+ G  D+   + ++++  GC PN    N + +   
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     AL     M+SKG  P  +TYN+LI+ L +     EA  L+ +M    ++P +I
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +Y++++ G C+ ++++ ++ +     EKG KP+   + ++I G+   G   +A++L
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 19/416 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + GKFDES      M  N    D+   + LI         + A RV  E+ E    PDV 
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++G+ +A +IE   ++   +   G    VV+YNI+I  L     ++ A  +++ L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              +C    +TY +L+      G  +KA+ +L+E                  G+C++G +
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +    +  +   GC+P+    N ++   +   K E+  +    M+S+G  P VVTY+ L
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ L +  +  +A  +++    KG  P+  +Y  L++  C+  +LD+A+      +  G 
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+  +N I+   C +G  + AL+++ ++    C PN+ ++NT+    +   D  RA  
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +   +L  G +PD I+YN  +  LC    + +AVG L D       PT I++NI++
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 233/508 (45%), Gaps = 35/508 (6%)

Query: 10  PKSNERVRVSS--SAETRPNTHLLSFDV---------KETQFMKLIKRSFRAGKFDESLY 58
           PKS    RV     +E  P++ L  FD              F  ++KR F          
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 59  FIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYG-EPDVFAYNALISG 115
            +E +    CK P+ V  T +IK + +    ++A+ + + + E +G +P + +YN+L++ 
Sbjct: 65  IVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
             ++N+ + A        + G SP++ TYNI+I   C +   + A ++ + +      P 
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           V +Y  LI +    G    A+KL DEM                    RG  PDV  YN+L
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEM------------------PERGVTPDVACYNIL 225

Query: 236 LRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +      G      ++   ++    + PN+ +Y+++I+ LC+ GK +++ ++    K+  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              D Y+Y  LI   C  G LD A      M  +G  PD+V YNT+L  + + G  ++ L
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+++ +   GC   V SYN +   L+ +     A+ +   +  K    D +TY  L+  L
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C++G +++A+ +L + E+ R      +Y+ +I G C+  R++E   VL  M + GCKPN 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
                +I G        +A+     +VS
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVS 492



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 194/386 (50%), Gaps = 17/386 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           +G  D +    + M  NG  PDVV+   ++  + +  +  + + + +++EK G   V +Y
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI G  +  +++ A  + + L  +    D +TY +++  LC  G +  A  + ++   
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
                    Y+ +I     EG+ D+   +LD+M                 G  +   +  
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A +F  ++ S+GC P V++YN L+  L    ++ E   L+ EM+ +G +PN++TYS+L++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+  K + A+++   A EKG  PD   ++ +I   C  G+++ A++    M    C+P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V +NT++  F K  + ++A +I++ +   G  P++ SYN     L S      A+G +
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFL 662

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + +G+ P  IT+N L+  +  +G
Sbjct: 663 NDAVDRGVLPTAITWNILVRAVLDNG 688



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    R G+ DE    ++ M  +GCKP+  +C  +I  F +  K   A+R
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 94  VM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
               ++ K   P V  YN LI+G  KA +   A  ++  +  +G+ P+++TY++++  LC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
               ++ A  ++ Q L    KP V  + I+I                   G+C  G V  
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIH------------------GLCSSGKVED 587

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q    ++ R C P+++++N L+     +  +E   K+   ++  G +P++++Y+I + 
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            LC   +  DAV  L  A ++G+ P A +++ L+ A   +G L
Sbjct: 648 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 251/526 (47%), Gaps = 60/526 (11%)

Query: 35  VKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           ++ T F+K +  + R    DE++   +  M    C PD +    +IK    + +S +A+ 
Sbjct: 160 IQATTFLKCLCHAKRT---DEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALD 216

Query: 94  VMEILEKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           +++ + K G    PDV ++N +I GF K  ++  A  + + +  +G  PDV TYN ++ +
Sbjct: 217 MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDA 276

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC    ++ A  V  Q++    +P  +TY  +I      G   ++ K+  +M        
Sbjct: 277 LCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPD 336

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW-------- 245
                     +CK G    A +  + + ++G  PD++SY++LL      G++        
Sbjct: 337 TVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFH 396

Query: 246 ---------------------------EEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                                      +E   + TEM  +G+ PNVVTYS LIS+ CR G
Sbjct: 397 SMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNY 337
           +  DA++        G+ P+   Y  LI  +C  G L  A EF+  M+S G   P+IV +
Sbjct: 457 RLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFF 516

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++I+ + C  G    A ++F  +  +G  P + ++N++       G   +A G++  M+S
Sbjct: 517 SSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 576

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GIEPD +T N+L+S  C+ G +D+ + L  +M   + +PT ++YNI++ G  +  R + 
Sbjct: 577 VGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSA 636

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++   M + G   +  TY +L++G+       EA+ L + L +M
Sbjct: 637 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAM 682



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 253/544 (46%), Gaps = 98/544 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + D    F+  ++  G K   +  T  +K     +++++AV V+  L +  E    P
Sbjct: 136 RARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL--LHRMSELSCVP 193

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRG--FSPDVVTYNIMIGSLCSRGMIESAFK 162
           D  +YN +I   C  ++ + A  ++ R+   G   SPDVV++N +I     +G +  A  
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F+++++    P V TY  ++ A                  +CK   + +A   +R +  
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDA------------------LCKARAMDKAEFVLRQMVD 295

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G +PD ++YN ++      G W+E  K+  +M S+GL P+ VT+S  +SSLC+ G+++D
Sbjct: 296 KGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD 355

Query: 283 AVDVLRAAKEKGLTPDAYSY-----------------------------------DPLIS 307
           A ++ +    KG  PD  SY                                   + LIS
Sbjct: 356 AEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILIS 415

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+ K G +D A+     M   G  P++V Y+T+++AFC+ G    A+E F ++  +G  P
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-------------------------- 401
           N + Y+++       GD ++A   ISEM+SKG+                           
Sbjct: 476 NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDV 535

Query: 402 ----------PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
                     P  +T+NSLI   C  G +++A G+L  M S    P V++ N ++ G+CK
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCK 595

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMHAISRDT 510
           + +I++ + +   M  K  KP   TY ++++G+   G  + A ++ + ++ S  A+  DT
Sbjct: 596 SGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDT 655

Query: 511 FKRL 514
           +K L
Sbjct: 656 YKIL 659



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 231/508 (45%), Gaps = 54/508 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  +I   F+ G+  ++      MV  G  PDV     ++    + R  +KA  V+ +++
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  EPD   YNA+I G+  +   + + K+  ++ S+G  PD VT++  + SLC  G  +
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A ++F  +      P +++Y+IL+     EG+      L   M                
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K+GM+ +A      ++ +G +P+V++Y+ L+     MG+  +  +  ++MIS G+E
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 262 PN------------------------------------VVTYSILISSLCRDGKTEDAVD 285
           PN                                    +V +S +I SLC +G+  DA D
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           V       G  P   +++ LI  YC  G+++ A   LD M+S G  PD+V  NT+++ +C
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K+G  D  L +F ++      P   +YN +   L  +G    A  M  EM+  G   D  
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TY  L+  LCR+ + DEA+ L   + +   +  +   N +I    K RR  E+ ++ AA+
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              G  PN +TY ++I  +   G   EA
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEA 742



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 226/505 (44%), Gaps = 48/505 (9%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKF--DESLYFIESMVANGC--------- 68
           SSA T P   L  +D  +  F+  I R  RAG F  D++ +  + ++  G          
Sbjct: 27  SSATTSPP--LRCWD-PQVAFVAAIAR-VRAGTFCTDDAHHLFDELLRQGTPVHNRSLND 82

Query: 69  -------KPDVVMCTK---LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
                   PD V C+    L+   F     N+  R  E   +     V  Y  L+   C+
Sbjct: 83  FLAALARAPDSVSCSNGPALVLALF-----NRICR-EEAGPRVAPLTVRTYGILMDCCCR 136

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVI 177
           A + +L    + RL   G     +     +  LC     + A  V    + + +C P  I
Sbjct: 137 ARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAI 196

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y  +I++   + ++ +A+ ++  M                  E   C PDV+S+N ++ 
Sbjct: 197 SYNTVIKSLCGDSRSQEALDMVQRMAK----------------EGGRCSPDVVSFNTVIH 240

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                G+  +   L  EM+ +G+ P+V TY+ ++ +LC+    + A  VLR   +KG+ P
Sbjct: 241 GFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP 300

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  +Y+ +I  Y   G    + +    M S G +PD V +++ +++ CK+G +  A EIF
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           + ++  G  P++ SY+ +     + G       +   M  KGI  +    N LIS   + 
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           GM+DEA+ +  +M+    RP V++Y+ +I  FC+  R+ +++E  + M   G +PN   Y
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480

Query: 478 VLLIEGIGYGGWRAEAMELANALVS 502
             LI G    G   +A E  + ++S
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMS 505



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 27/413 (6%)

Query: 116 FCKANQI-ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN--C 172
            C A +  E  + +L R+      PD ++YN +I SLC     + A  +  ++ ++   C
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P V+++  +I     +G+  KA  L +EM   +KG+V                PDV +Y
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEM--VQKGVV----------------PDVGTY 270

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N ++  L      ++ E ++ +M+ +G+EP+ VTY+ +I      G  +++  + R    
Sbjct: 271 NSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTS 330

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL PD  ++   +S+ CK GR   A E   YM + G +PDIV+Y+ +L  +   G    
Sbjct: 331 KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFAD 390

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
              +F  ++D G   N    N + SA    G    A+ + +EM  +G+ P+ +TY++LIS
Sbjct: 391 MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLIS 450

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC-K 471
             CR G + +A+     M S    P    Y+ +I GFC    + ++ E ++ M  KG  +
Sbjct: 451 AFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHR 510

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVY 524
           PN   +  +I  +   G   +A ++ N ++  H   R T    N    L+D Y
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVI--HIGDRPTIVTFN---SLIDGY 558



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 197/451 (43%), Gaps = 54/451 (11%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFA 108
           +G + ES      M + G  PD V  +  +    +  +S  A  + + +   G  PD+ +
Sbjct: 315 SGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVS 374

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ L+ G+    +    N +   +  +G   +    NI+I +   RGM++ A  VF ++ 
Sbjct: 375 YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQ 434

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P V+TY+ LI A    G+   AM+   +M                 G C  G + 
Sbjct: 435 GQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLV 494

Query: 212 QAFQFVRSLESRGCQ------------------------------------PDVISYNML 235
           +A +F+  + S+G                                      P ++++N L
Sbjct: 495 KAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSL 554

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +     +GK E+   ++  M+S G+EP+VVT + L+S  C+ GK +D + + R    K +
Sbjct: 555 IDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKV 614

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P   +Y+ ++    + GR   A +    MI  G   DI  Y  +L   C+N   D+A+ 
Sbjct: 615 KPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 674

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +F KL  + C  +++  NTM +AL+    +  A  + + + + G+ P+  TY  +I  L 
Sbjct: 675 LFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLL 734

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           ++G V+EA  +   ME +   P+    N II
Sbjct: 735 KEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 195/427 (45%), Gaps = 20/427 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G  DE++     M   G +P+VV  + LI  F +  +   A+     +   G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESA 160
            EP+   Y++LI GFC    +  A + +  + S+G   P++V ++ +I SLC  G +  A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             VF+ ++    +PT++T+  LI    L G+ +KA  +LD M                  
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM------------------ 574

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S G +PDV++ N L+      GK ++G  L  EM+ + ++P  VTY+I++  L R G+T
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
             A  +     + G   D  +Y  L+   C++   D AI     + +  C  DI   NT+
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTM 694

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + A  K    ++A ++F  +S  G  PNVS+Y  M   L   G    A  M S M   G 
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P     N +I  L + G + +A   +  ++ T       + ++++  F    +  E I+
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 814

Query: 461 VLAAMFE 467
            L A ++
Sbjct: 815 FLPAKYQ 821


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 237/468 (50%), Gaps = 22/468 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    ++G+  ++    ++M  NG  P V+    +I  + +  + N A+++ E++E
Sbjct: 176 FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELME 235

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD + YN LI G C   + E A ++L+     GF+P VVT+  +I   C     +
Sbjct: 236 KNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++ ++++   CK  +  +  LI + + + +  +A +LL+E+                
Sbjct: 295 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 354

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G V  A + ++ +E  GCQP+  +YN L+  L+   K  +   L+T+M   G+ 
Sbjct: 355 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 414

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNV+TY+ L+   C +   ++A  +    ++ GL PD ++Y  L  A CK GR + A  F
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +   +  G     V Y T++  F K GN D A  + E++ D GC P+  +Y+ +  AL  
Sbjct: 475 I---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 531

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 AL ++ +M  +GI+     Y  LI  + R+G  D A  +  +M S+  +P+  +
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           Y + I  +CK  R+ ++ +++  M  +G  P+  TY +LI+G G+ G+
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 639



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 225/506 (44%), Gaps = 40/506 (7%)

Query: 51  GKFDESLYF---IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            +FD + Y       +V +G  PD V    +IK + +E     A R   +L + G EP+ 
Sbjct: 44  ARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPET 103

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F  NAL+ G+C+  ++  A  +   +   G   +  +Y I+I  LC    +  A  +F  
Sbjct: 104 FTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLM 163

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           + RD C P V  +T LI      G+   A  L D M                 G  K G 
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    +E  GC PD  +YN L+  L +  K EE E+L+   +  G  P VVT++ 
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 282

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C   K +DA+ +           D   +  LI++  K  RL  A E L+ + ++G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P+++ Y +I+  +CK+G  D ALE+ + +   GC PN  +YN++   L       +A+
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++++M   GI P+ ITY +L+   C +   D A  L   ME    +P   +Y ++    
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 462

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS------- 502
           CK  R  E+   +     KG    +  Y  LI+G    G    A  L   ++        
Sbjct: 463 CKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519

Query: 503 ------MHAISRDTFKRLNRTFPLLD 522
                 +HA+ +   KRLN   P+LD
Sbjct: 520 YTYSVLLHALCKQ--KRLNEALPILD 543



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 233/516 (45%), Gaps = 66/516 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KLI    +  +  E+   +  + ANG  P+V+  T +I  + +  K + A+ V++++E
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+ + YN+L+ G  K  ++  A  +L +++  G  P+V+TY  ++   C     +
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 159 SAFKVFDQLLRDNCKP--------------------------------TVITYTILIQAT 186
           +AF++F+ + ++  KP                                T + YT LI   
Sbjct: 435 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 494

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G TD A  L++ M                  +CK+  + +A   +  +  RG +  +
Sbjct: 495 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 554

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y +L+  +L  GK +  +++  EM S G +P+  TY++ I+S C++G+ EDA D++  
Sbjct: 555 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 614

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + +G+ PD  +Y+ LI      G +D A   L  M+   C P+   Y  +L    K   
Sbjct: 615 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 674

Query: 350 A----------------DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           A                D   ++ E++   G  P V++Y+++ +    +G    A  ++ 
Sbjct: 675 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 734

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M  KG+ P+E  Y  LI C C     ++A+  +  M    F+P + SY ++++G C   
Sbjct: 735 HMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 794

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
              +   +   + E G   +E  + +L +G+   G+
Sbjct: 795 DFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 830



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 222/500 (44%), Gaps = 43/500 (8%)

Query: 23  ETRPNTHLLSFDVKE------TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +T     LL+  VKE        F  LI     A KFD++L     M+++ CK D+ +  
Sbjct: 257 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           KLI    ++ +  +A  ++  +   G  P+V  Y ++I G+CK+ ++++A +VL  +   
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+  TYN ++  L     +  A  +  ++ +D   P VITYT L+Q    E   D A
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
            +L + M                  +CK G   +A+ F+     +G     + Y  L+  
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 493

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G  +    L+  MI  G  P+  TYS+L+ +LC+  +  +A+ +L     +G+   
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            ++Y  LI    ++G+ D A    + M S G  P    Y   + ++CK G  + A ++  
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+   G  P+V +YN +       G   RA   +  M+    EP+  TY  L+  L +  
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673

Query: 419 M----------------VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +                +D    LL  M      PTV +Y+ +I GFCK  R+ E+  +L
Sbjct: 674 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 733

Query: 463 AAMFEKGCKPNETTYVLLIE 482
             M  KG  PNE  Y LLI+
Sbjct: 734 DHMCGKGLSPNEDIYTLLIK 753



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 1/292 (0%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A Q +R   S         YN  LR+L      E   ++ ++++  GL P+ VTY+ +
Sbjct: 15  ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 74

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G    A    R   E GL P+ ++ + L+  YC+ G L  A      M   GC
Sbjct: 75  IKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC 134

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +  +Y  ++   C      +AL +F  +   GC PNV ++  + S L  SG    A  
Sbjct: 135 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 194

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   G+ P  +TYN++I    + G +++A+ +   ME     P   +YN +I G C
Sbjct: 195 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 254

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             ++  E+ E+L    ++G  P   T+  LI G        +A+ + N ++S
Sbjct: 255 D-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 305



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK-----KFFQERKSNKAV 92
           T +  LI    +AG+ +E+   ++ M   G  P+  + T LIK     KFF+     KA+
Sbjct: 711 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE-----KAL 765

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             + I+ + G +P + +Y  L+ G C     E    +   L   G++ D V + I+   L
Sbjct: 766 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 825

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
              G ++  F++   + +  C  +  TY ++
Sbjct: 826 LKAGYVDICFQMLSIMEKRYCCISSQTYALV 856


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 237/460 (51%), Gaps = 19/460 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + + ++    + KF+++L     M  +   P +V  ++L+    + +K    + +   
Sbjct: 39  SDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRH 98

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E  G   D+++++ LI  FC+ +++ LA   L ++   GF P +VT+  ++   C    
Sbjct: 99  IEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 158

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           I+ A  + DQ++    +P V+ Y  +I +     Q D A+ +L+ M              
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM-------------- 204

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               E  G +PDVI+YN L+  L + GKW    +++++M+  G+ P+V+T+S +I    +
Sbjct: 205 ----EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGK 260

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+  +A        ++ + P+  +Y+ LI+  C  G LD A + L++M+S G  P+ V 
Sbjct: 261 EGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT 320

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT++  +CK+   D A++I   +S  G   +  +YNT++     +G    A  +++ M+
Sbjct: 321 YNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMV 380

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G+ PD  T+N L+  LC  G +++A+  L D++ +     +I+YNIII G CK  ++ 
Sbjct: 381 SCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVE 440

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++  +  ++  KG  P+  TY  ++ G+       EA EL
Sbjct: 441 DAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 216/445 (48%), Gaps = 26/445 (5%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           AE+RP   ++ F        +L+    +  K++  +     +   G   D+   + LI  
Sbjct: 65  AESRPLPSIVDFS-------RLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDC 117

Query: 82  FFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           F +  + + A+  +  + K G EP +  + +L++GFC  N+I+ A  ++D++   G+ P+
Sbjct: 118 FCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPN 177

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           VV YN +I SLC    +++A  V + + +   +P VITY  LI      G+   + ++L 
Sbjct: 178 VVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILS 237

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           +M                     G  PDVI+++ ++      G+  E +K   EMI R +
Sbjct: 238 DM------------------MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSV 279

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +PN+VTY+ LI+ LC  G  ++A  VL     KG  P+A +Y+ L++ YCK  R+D A++
Sbjct: 280 DPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMK 339

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M  DG   D   YNT+   +C+ G  + A ++  ++   G  P++ ++N +   L 
Sbjct: 340 ILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLC 399

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G   +AL  + ++         ITYN +I  +C+   V++A  L   +      P VI
Sbjct: 400 EHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVI 459

Query: 441 SYNIIILGFCKTRRINESIEVLAAM 465
           +Y  +++G  + R   E+ E+   M
Sbjct: 460 TYTTMMIGLRRKRLWLEAHELYRKM 484



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 149/285 (52%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +E  G   D+ S++ L+       +       + +M+  G EP++VT+  L++  C  
Sbjct: 97  RHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 156

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            + ++A+ ++      G  P+   Y+ +I + C++ ++D A++ L++M   G  PD++ Y
Sbjct: 157 NRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITY 216

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++     +G    +  I   +  +G  P+V +++ M       G  + A     EM+ 
Sbjct: 217 NSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQ 276

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + ++P+ +TYNSLI+ LC  G++DEA  +L  M S  F P  ++YN ++ G+CK++R+++
Sbjct: 277 RSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDD 336

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++++L  M   G   +  TY  L +G    G    A ++   +VS
Sbjct: 337 AMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVS 381



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 138/271 (50%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y   LR+ L+  K+ +   L  +M      P++V +S L+ ++ +  K E  + + R  +
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G++ D YS+  LI  +C+  RL LA+  L  M+  G  P IV + +++  FC      
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ + +++  +G  PNV  YNT+  +L  +     AL +++ M   GI PD ITYNSLI
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + L   G    +  +L DM      P VI+++ +I  F K  ++ E+ +    M ++   
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           PN  TY  LI G+   G   EA ++ N +VS
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVS 311



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI R F +GK+  S   +  M+  G  PDV+  + +I  F +E +  +A +   E++
Sbjct: 216 YNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMI 275

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++  +P++  YN+LI+G C    ++ A KVL+ + S+GF P+ VTYN ++   C    ++
Sbjct: 276 QRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVD 335

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K+   +  D       TY  L Q     GQ + A K+L  M                
Sbjct: 336 DAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLL 395

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+C+ G + +A   +  L+       +I+YN++++ +    K E+   L   +  +G+ 
Sbjct: 396 DGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVS 455

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRA-AKEKGLTP 297
           P+V+TY+ ++  L R     +A ++ R   K+ GL P
Sbjct: 456 PDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 72/153 (47%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL +F  +++    P++  ++ +  A+         + +   +   GI  D  ++++L
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I C CR   +  A+  L  M    F P+++++  ++ GFC   RI E++ ++  +   G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +PN   Y  +I+ +        A+++ N +  M
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKM 207


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 18/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F K++    + G   E+   +  ++  G   ++      I+   +  +  +AVR+++ + 
Sbjct: 190 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 249

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y  PDV  YN LI G CK +  + A   L R+ ++G  PD  TYN +I   C   M++ 
Sbjct: 250 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 309

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++    +     P  +TY  LI                   G+C +G V +A +    
Sbjct: 310 ATELLKDAVFKGFVPDQVTYCSLIN------------------GLCAEGDVERALELFNE 351

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +++G +PD++ YN L++ L   G      ++M EM   G  P++ TY+I+I+ LC+ G 
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 411

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA  V+  A  KG  PD ++++ LI  YCK  +LD A++ ++ M   G  PD + YN+
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L   CK G  ++  E F+++   GC PN  +YN +      S     A  +I +M  +G
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD +++N+LI   CR+G ++ A  L   +E   +  T  ++N +I  F     ++ + 
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591

Query: 460 EVLAAMFEKGCKPNETTYVLLIEG 483
           ++   M  KG + +  TY +LI+G
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDG 615



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 20/486 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           A   D++      M+A G  PD+   T  ++ F    + + A+R++  L   G     AY
Sbjct: 99  AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAY 155

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++ G         A ++ D++      P++  +N ++ +LC RG +  A  +  ++++
Sbjct: 156 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 215

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQA 213
                 + TY I I+     G+  +A++L+D M                G+CKK M  +A
Sbjct: 216 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 275

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
             ++R + ++GC PD  +YN ++     +   +E  +L+ + + +G  P+ VTY  LI+ 
Sbjct: 276 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 335

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC +G  E A+++   A+ KG+ PD   Y+ L+   C  G +  A++ ++ M  +GC PD
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 395

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  YN ++   CK GN   A  +       G  P+V ++NT+            AL ++ 
Sbjct: 396 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 455

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M   GI PD ITYNS+++ LC+ G V+E      +M      P  I+YNI+I  FC++ 
Sbjct: 456 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 515

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HAISRDTFK 512
           ++ E+ +V+  M ++G  P+  ++  LI G    G    A  L   L    ++ + DTF 
Sbjct: 516 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 575

Query: 513 RLNRTF 518
            L   F
Sbjct: 576 TLIGAF 581



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 217/436 (49%), Gaps = 20/436 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+  E++  ++ M A    PDVV    LI+   ++    +A+  +  +   G  PD F 
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I G+CK + ++ A ++L     +GF PD VTY  +I  LC+ G +E A ++F++  
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               KP ++ Y  L++                  G+C +G++  A Q +  +   GC PD
Sbjct: 354 AKGIKPDIVVYNSLVK------------------GLCLQGLILHALQVMNEMAEEGCHPD 395

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +YN+++  L  MG   +   +M + I +G  P+V T++ LI   C+  K + A+ ++ 
Sbjct: 396 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 455

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G+ PD  +Y+ +++  CK G+++   E    MI  GC P+ + YN ++  FC++ 
Sbjct: 456 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 515

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A ++  K+S  G  P+  S+NT+      +GD   A  +  ++  KG      T+N
Sbjct: 516 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 575

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI        +  A  +  +M S   R    +Y ++I G CKT  ++ +   L  M +K
Sbjct: 576 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK 635

Query: 469 GCKPNETTYVLLIEGI 484
           G  P+ +T+  +I  +
Sbjct: 636 GFIPSMSTFGRVINSL 651



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 14/388 (3%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y A I  + +A ++  A    +R+      P    YN ++ +L      + A KV+ ++L
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQ 215
                P + T+TI +++  L  +   A++LL  +             G+   G    A Q
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +      P++ ++N +L  L   G   E   L+ ++I RG+  N+ TY+I I  LC
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+  +AV ++   +   + PD  +Y+ LI   CK      A+ +L  M++ GCLPD  
Sbjct: 234 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+  +CK     +A E+ +     G  P+  +Y ++ + L + GD  RAL + +E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            +KGI+PD + YNSL+  LC  G++  A+ ++ +M      P + +YNI+I G CK   I
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +++  V+     KG  P+  T+  LI+G
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDG 440



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 19/374 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F   +  +  LI      G  + +L       A G KPD+V+   L+K    +     A+
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +VM E+ E+   PD+  YN +I+G CK   I  A  V++    +G+ PDV T+N +I   
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C R  ++SA ++ +++      P  ITY  ++                   G+CK G V 
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLN------------------GLCKAGKVN 483

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +  +  + +  +GC P+ I+YN+L+       K EE  K++ +M   GL P+ V+++ LI
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              CR+G  E A  + +  +EKG +  A +++ LI A+     + +A +  D M+S G  
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D   Y  ++   CK  N D+A     ++   G  P++S++  + ++L  +    +A+G+
Sbjct: 604 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 663

Query: 392 ISEMLSKGIEPDEI 405
           I  M+  G+ P+ +
Sbjct: 664 IHIMVKIGVVPEVV 677



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A      ++   C P   +YN ++  L++    ++  K+   M++ G+ P++ 
Sbjct: 63  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 122

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++I + S C   +   A+ +LRA   +G    A +Y  ++      G    A +  D M
Sbjct: 123 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 178

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +     P++  +N +L A CK G+  +A  +  K+   G   N+ +YN     L  +G  
Sbjct: 179 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 238

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ ++  M +  + PD +TYN+LI  LC+  M  EA+  L  M +    P   +YN I
Sbjct: 239 PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           I G+CK   + E+ E+L     KG  P++ TY  LI G+   G    A+EL N
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 5/265 (1%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y   +R     G+  +       M      P    Y+ ++ +L      + A  V     
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G++PD +++   + ++C   R  +A+  L  +   G     V Y T++     +G+  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A ++F+++      PN++++N +  AL   GD + A  ++ +++ +G+  +  TYN  I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC  G + EAV L+  M +    P V++YN +I G CK     E++  L  M  +GC 
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P++ TY  +I+G        EA EL
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATEL 313


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 241/501 (48%), Gaps = 46/501 (9%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNAL 112
           D++L+    M+     P ++   K++  F + +     V +   LE K  +PD F  N L
Sbjct: 45  DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI LA  VL ++   G+ PD VT   +I  LC +G ++ A    D+LL    
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGF 164

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQ 215
           +   ++Y  LI      G+T  A++LL  +                  +CK+ +V +A  
Sbjct: 165 RLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +  +G   +V++Y+ ++     +GK  E    + EM+ + + P+V  Y+ L+ +L 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 276 RDGKTEDAVDVL---------------------------RAAKEKGLTPDAYSYDPLISA 308
           ++GK ++A +VL                            A    G+TPD +SY+ +I+ 
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINR 344

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            CK  R++ A+     M     +P+ V YN+++   CK+G    A ++ +++ D G   N
Sbjct: 345 LCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHAN 404

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS-CLCRDGMVDEAVGLL 427
           V +YN++ + L  +G   +A+ +I++M  +GI+PD  T N L+   LC+   +  A GL 
Sbjct: 405 VITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLF 464

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            D+    + P V +YNIII G CK   ++E+  + + M + GC PN  T+ ++I  +   
Sbjct: 465 QDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEK 524

Query: 488 GWRAEAMELANALVSMHAISR 508
           G   +A +L   +++   + R
Sbjct: 525 GETDKAEKLLCEMIARGLLKR 545



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 215/448 (47%), Gaps = 47/448 (10%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+ + +   +  ++  G +PD V  T LIK    + +  KA+   + L   G   D  +Y
Sbjct: 112 GQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSY 171

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+G CK  +   A ++L R+  R   P+VV YN +I  LC R ++  A  +F ++  
Sbjct: 172 GTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSV 231

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
                 V+TY+ +I                   G C  G + +A  F+  +  +   PDV
Sbjct: 232 KGISANVVTYSAIIH------------------GFCIVGKLTEALGFLNEMVLKAINPDV 273

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS--------------------- 268
             YN L+  L   GK +E + ++  ++   L+PNV+TY+                     
Sbjct: 274 YIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTP 333

Query: 269 ------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
                 I+I+ LC+  + E+A+++ +   +K + P+  +Y+ LI   CK GR+  A + +
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M   G   +++ YN+++   CKNG  D+A+ +  K+ D G  P++ + N +   L   
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453

Query: 383 GDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           G +++ A G+  ++L KG  P+  TYN +I   C++G++DEA  L   ME +   P  I+
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAIT 513

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKG 469
           + III    +    +++ ++L  M  +G
Sbjct: 514 FKIIICALLEKGETDKAEKLLCEMIARG 541



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 190/399 (47%), Gaps = 11/399 (2%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     G+  ++L+F + ++A G + D V    LI    +  ++  A++++  ++ + 
Sbjct: 139 LIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRL 198

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+V  YN +I   CK   +  A  +   +  +G S +VVTY+ +I   C  G +  A 
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMV--------GQ 212
              ++++     P V  Y  L+ A   EG+  +A  +L  +   C K  V        G 
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A     ++   G  PDV SYN+++  L  + + EE   L  EM  + + PN VTY+ LI 
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID 378

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G+   A D++    ++G   +  +Y+ LI+  CK+G+LD AI  ++ M   G  P
Sbjct: 379 GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438

Query: 333 DIVNYNTILAA-FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           D+   N +L    CK      A  +F+ L D G  PNV +YN +       G    A  +
Sbjct: 439 DMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYAL 498

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            S+M   G  P+ IT+  +I  L   G  D+A  LL +M
Sbjct: 499 QSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 146/315 (46%), Gaps = 1/315 (0%)

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           FQF R L  R   P +I +N +L +   M  +     L   +  + ++P+  T +ILI+ 
Sbjct: 49  FQFHRMLCMRH-TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINC 107

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C  G+   A  VL    + G  PD  +   LI   C  G++  A+ F D +++ G   D
Sbjct: 108 FCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLD 167

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V+Y T++   CK G    A+++  ++      PNV  YNT+   L        A  + S
Sbjct: 168 QVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFS 227

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM  KGI  + +TY+++I   C  G + EA+G L +M      P V  YN ++    K  
Sbjct: 228 EMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG 287

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           ++ E+  VLA + +   KPN  TY  LI+G     + A  +      V  + I  +   +
Sbjct: 288 KVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCK 347

Query: 514 LNRTFPLLDVYKEIS 528
           + R    L++YKE+ 
Sbjct: 348 IKRVEEALNLYKEMH 362


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 18/444 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F K++    + G   E+   +  ++  G   ++      I+   +  +  +AVR+++ + 
Sbjct: 189 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 248

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y  PDV  YN LI G CK +  + A   L R+ ++G  PD  TYN +I   C   M++ 
Sbjct: 249 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 308

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++    +     P  +TY  LI                   G+C +G V +A +    
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLIN------------------GLCAEGDVERALELFNE 350

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +++G +PD++ YN L++ L   G      ++M EM   G  P++ TY+I+I+ LC+ G 
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 410

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA  V+  A  KG  PD ++++ LI  YCK  +LD A++ ++ M   G  PD + YN+
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +L   CK G  ++  E F+++   GC PN  +YN +      S     A  +I +M  +G
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD +++N+LI   CR+G ++ A  L   +E   +  T  ++N +I  F     ++ + 
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590

Query: 460 EVLAAMFEKGCKPNETTYVLLIEG 483
           ++   M  KG + +  TY +LI+G
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDG 614



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 20/486 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           A   D++      M+A G  PD+   T  ++ F    + + A+R++  L   G     AY
Sbjct: 98  AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAY 154

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++ G         A ++ D++      P++  +N ++ +LC RG +  A  +  ++++
Sbjct: 155 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 214

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQA 213
                 + TY I I+     G+  +A++L+D M                G+CKK M  +A
Sbjct: 215 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEA 274

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
             ++R + ++GC PD  +YN ++     +   +E  +L+ + + +G  P+ VTY  LI+ 
Sbjct: 275 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 334

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC +G  E A+++   A+ KG+ PD   Y+ L+   C  G +  A++ ++ M  +GC PD
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 394

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  YN ++   CK GN   A  +       G  P+V ++NT+            AL ++ 
Sbjct: 395 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 454

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M   GI PD ITYNS+++ LC+ G V+E      +M      P  I+YNI+I  FC++ 
Sbjct: 455 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 514

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HAISRDTFK 512
           ++ E+ +V+  M ++G  P+  ++  LI G    G    A  L   L    ++ + DTF 
Sbjct: 515 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 574

Query: 513 RLNRTF 518
            L   F
Sbjct: 575 TLIGAF 580



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 217/436 (49%), Gaps = 20/436 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+  E++  ++ M A    PDVV    LI+   ++    +A+  +  +   G  PD F 
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I G+CK + ++ A ++L     +GF PD VTY  +I  LC+ G +E A ++F++  
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               KP ++ Y  L++                  G+C +G++  A Q +  +   GC PD
Sbjct: 353 AKGIKPDIVVYNSLVK------------------GLCLQGLILHALQVMNEMAEEGCHPD 394

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +YN+++  L  MG   +   +M + I +G  P+V T++ LI   C+  K + A+ ++ 
Sbjct: 395 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 454

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G+ PD  +Y+ +++  CK G+++   E    MI  GC P+ + YN ++  FC++ 
Sbjct: 455 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 514

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A ++  K+S  G  P+  S+NT+      +GD   A  +  ++  KG      T+N
Sbjct: 515 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 574

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI        +  A  +  +M S   R    +Y ++I G CKT  ++ +   L  M +K
Sbjct: 575 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK 634

Query: 469 GCKPNETTYVLLIEGI 484
           G  P+ +T+  +I  +
Sbjct: 635 GFIPSMSTFGRVINSL 650



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 14/388 (3%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y A I  + +A ++  A    +R+      P    YN ++ +L      + A KV+ ++L
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQ 215
                P + T+TI +++  L  +   A++LL  +             G+   G    A Q
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +      P++ ++N +L  L   G   E   L+ ++I RG+  N+ TY+I I  LC
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+  +AV ++   +   + PD  +Y+ LI   CK      A+ +L  M++ GCLPD  
Sbjct: 233 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+  +CK     +A E+ +     G  P+  +Y ++ + L + GD  RAL + +E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            +KGI+PD + YNSL+  LC  G++  A+ ++ +M      P + +YNI+I G CK   I
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +++  V+     KG  P+  T+  LI+G
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDG 439



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 19/374 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F   +  +  LI      G  + +L       A G KPD+V+   L+K    +     A+
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +VM E+ E+   PD+  YN +I+G CK   I  A  V++    +G+ PDV T+N +I   
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C R  ++SA ++ +++      P  ITY  ++                   G+CK G V 
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLN------------------GLCKAGKVN 482

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +  +  + +  +GC P+ I+YN+L+       K EE  K++ +M   GL P+ V+++ LI
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              CR+G  E A  + +  +EKG +  A +++ LI A+     + +A +  D M+S G  
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D   Y  ++   CK  N D+A     ++   G  P++S++  + ++L  +    +A+G+
Sbjct: 603 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 662

Query: 392 ISEMLSKGIEPDEI 405
           I  M+  G+ P+ +
Sbjct: 663 IHIMVKIGVVPEVV 676



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A      ++   C P   +YN ++  L++    ++  K+   M++ G+ P++ 
Sbjct: 62  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 121

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++I + S C   +   A+ +LRA   +G    A +Y  ++      G    A +  D M
Sbjct: 122 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 177

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +     P++  +N +L A CK G+  +A  +  K+   G   N+ +YN     L  +G  
Sbjct: 178 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 237

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ ++  M +  + PD +TYN+LI  LC+  M  EA+  L  M +    P   +YN I
Sbjct: 238 PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           I G+CK   + E+ E+L     KG  P++ TY  LI G+   G    A+EL N
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 5/265 (1%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y   +R     G+  +       M      P    Y+ ++ +L      + A  V     
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G++PD +++   + ++C   R  +A+  L  +   G     V Y T++     +G+  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A ++F+++      PN++++N +  AL   GD + A  ++ +++ +G+  +  TYN  I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC  G + EAV L+  M +    P V++YN +I G CK     E++  L  M  +GC 
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P++ TY  +I+G        EA EL
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATEL 312


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 20/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK ++   F+  +   G  PD+V    LI  +  +    +A  +M  +   G  P V+
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I+G CK  + E A +V   +   G SPD  TY  ++   C +G +    KVF  +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              +  P ++ ++ ++      G  DKA+   + +                 G C+KGM+
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A      +  +GC  DV++YN +L  L       E +KL  EM  R L P+  T +IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ G  ++A+++ +  KEK +  D  +Y+ L+  + K G +D A E    M+S   
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP  ++Y+ ++ A C  G+  +A  +++++      P V   N+M      SG+      
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR--FRPTVISYNIIILG 448
            + +M+S+G  PD I+YN+LI    R+  + +A GL+  ME  +    P V +YN I+ G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           FC+  ++ E+  VL  M E+G  P+ +TY  +I G
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 213/477 (44%), Gaps = 57/477 (11%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + Q RK  +A     +L   G    + A NALI    +   +ELA  V   +   G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
              +V T NIM+ +LC  G +E       Q+      P ++TY  LI A   +G  ++A 
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +L++ M                 G+CK G   +A +    +   G  PD  +Y  LL   
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
              G   E EK+ ++M SR + P++V +S ++S   R G  + A+    + KE GL PD 
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN------------ 347
             Y  LI  YC+ G + +A+   + M+  GC  D+V YNTIL   CK             
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 348 -----------------------GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
                                  GN   A+E+F+K+ +     +V +YNT+       GD
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  + ++M+SK I P  I+Y+ L++ LC  G + EA  +  +M S   +PTV+  N 
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +I G+C++   ++    L  M  +G  P+  +Y  LI    YG  R E M  A  LV
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI----YGFVREENMSKAFGLV 643



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 195/395 (49%), Gaps = 18/395 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            ++ LI  + +A ++  A++    LRS+GF+  +   N +IGSL   G +E A+ V+ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R      V T  I++ A                  +CK G + +   F+  ++ +G  P
Sbjct: 227 SRSGVGINVYTLNIMVNA------------------LCKDGKMEKVGTFLSQVQEKGVYP 268

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+++YN L+    + G  EE  +LM  M  +G  P V TY+ +I+ LC+ GK E A +V 
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL+PD+ +Y  L+   CK G +    +    M S   +PD+V ++++++ F ++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN D+AL  F  + + G  P+   Y  +       G    A+ + +EML +G   D +TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+++  LC+  M+ EA  L  +M      P   +  I+I G CK   +  ++E+   M E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  + +  TY  L++G G  G    A E+   +VS
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 20/387 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  L+  + + G   E+      M +    PD+V  + ++  F +    +KA+     
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400

Query: 98  LEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +++ G  PD   Y  LI G+C+   I +A  + + +  +G + DVVTYN ++  LC R M
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  A K+F+++      P   T TILI      G    AM+L  +M              
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G  K G +  A +    + S+   P  ISY++L+  L + G   E  ++  EMIS+ 
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++P V+  + +I   CR G   D    L     +G  PD  SY+ LI  + ++  +  A 
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640

Query: 320 EFLDYMISD--GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
             +  M  +  G +PD+  YN+IL  FC+     +A  +  K+ + G  P+ S+Y  M +
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDE 404
              S  +   A  +  EML +G  PD+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPDD 727



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 5/150 (3%)

Query: 30  LLSFDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           ++S ++K T  +   +IK   R+G   +   F+E M++ G  PD +    LI  F +E  
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635

Query: 88  SNKA---VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +KA   V+ ME  +    PDVF YN+++ GFC+ NQ++ A  VL ++  RG +PD  TY
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
             MI    S+  +  AF++ D++L+    P
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 145/368 (39%), Gaps = 75/368 (20%)

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES--RGCQPD 228
           N K T ++ + +I   +  G+   A   L  + M ++  V +  + V SL+S    C  +
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCL--LRMIRRSGVSR-LEIVNSLDSTFSNCGSN 164

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              +++L+RT +   K  E  +  T + S+G   ++   + LI SL R G  E A  V +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G+  + Y+                                    N ++ A CK+G
Sbjct: 225 EISRSGVGINVYTL-----------------------------------NIMVNALCKDG 249

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++      ++ + G  P++ +YNT+ SA  S G    A  +++ M  KG  P   TYN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-- 466
           ++I+ LC+ G  + A  +  +M  +   P   +Y  +++  CK   + E+ +V + M   
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 467 ---------------------------------EKGCKPNETTYVLLIEGIGYGGWRAEA 493
                                            E G  P+   Y +LI+G    G  + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 494 MELANALV 501
           M L N ++
Sbjct: 430 MNLRNEML 437


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 235/500 (47%), Gaps = 55/500 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    R G   ++   +E+M A G +PD+     L     Q  K ++A ++ + +E
Sbjct: 282 YNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 341

Query: 100 KYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           + G   PDV  YN L+    K  +   A  +L+ +R +G    +VT+NI++  LC  G +
Sbjct: 342 QLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQL 401

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A    + +  +   P VITY  LI A+   G   KA  L+DEM               
Sbjct: 402 EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTL 461

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK+    +A + +R+   RG  PD +SY  ++       K E    L  EMI R L
Sbjct: 462 LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKL 521

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P++ TY+ LI  L   GK  +A+D L    E GL PD  +Y+ +I AYCK+G L+ A +
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           F + M+ +   PD+V  NT++   C  G  ++A+++FE   + G   +V +YNT+  AL 
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALC 641

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTR----- 434
              D   AL   ++M  +G++PD  TYN L+S L   G   EA  +L  + ES +     
Sbjct: 642 KDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRF 701

Query: 435 FRPTVIS------------------------------YNIIILGFCKTRRINESIEVLAA 464
           F P++ S                              YN  I   C   ++ E+  VL  
Sbjct: 702 FYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDE 761

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M +KG   + +TY+ L+EG+
Sbjct: 762 MMQKGMSVDNSTYITLMEGL 781



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 238/480 (49%), Gaps = 19/480 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+      G   ++L  +  M   G  PD V    L+    ++    +A  ++  ++
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P    YN L+S + +   I+ A  V++ + + GF PD+ TYN++   LC  G ++
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 159 SAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
            AFK+ D++ +     P V+TY  L+ A     ++  A+ LL+EM               
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C++G + +A   +  +   G  PDVI+YN L+      G   +   LM EM+  GL
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           + +  T + L+ +LC++ + E+A ++LRA  ++G  PD  SY  +++AY K+ + + A+ 
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             D MI     P I  YNT++      G   +A++   +L ++G  P+ ++YN +  A  
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             GD  +A    ++M+    +PD +T N+L++ LC  G +++A+ L         +  VI
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +YN +I   CK   ++ ++   A M  +G +P+  TY +L+  +   G   EA ++ + L
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 214/435 (49%), Gaps = 53/435 (12%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+ + +N L+   C    +  A   L +++  G SPD VTYN ++ + C +GM+  A  
Sbjct: 206 HPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEART 265

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +  ++ ++   PT  TY  L+ A    G   +A  +++ M                 G+C
Sbjct: 266 LLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLC 325

Query: 206 KKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           + G V +AF+    +E  G   PDV++YN L+       +  +   L+ EM  +G++ ++
Sbjct: 326 QAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSL 385

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT++I++  LCR+G+ E+A+  L    E+GLTPD  +Y+ LI A CK G +  A   +D 
Sbjct: 386 VTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445

Query: 325 MISDGC-----------------------------------LPDIVNYNTILAAFCKNGN 349
           M+  G                                    +PD V+Y T++AA+ K   
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + AL +++++      P++S+YNT+   L + G    A+  ++E++  G+ PD+ TYN 
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C++G +++A      M    F+P V++ N ++ G C   R+ +++++  +  EKG
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625

Query: 470 CKPNETTYVLLIEGI 484
            K +  TY  LI+ +
Sbjct: 626 KKVDVITYNTLIQAL 640



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 212/446 (47%), Gaps = 23/446 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFAYNALISGFCKANQI--ELA 125
           P   +    +  + + R  + A +++    + G   P + A NA++S   ++     + +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
                 L +    P+  T+N+++ + CS+G +  A     ++      P  +TY  L+ A
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                              C+KGM+G+A   +  ++  G  P   +YN L+     +G  
Sbjct: 254 ------------------HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWI 295

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL-TPDAYSYDP 304
           ++   ++  M + G EP++ TY++L + LC+ GK ++A  +    ++ G+ +PD  +Y+ 
Sbjct: 296 KQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNT 355

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+ A  K  R   A+  L+ M   G    +V +N I+   C+ G  ++AL   E +++ G
Sbjct: 356 LVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG 415

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+V +YNT+  A   +G+  +A  ++ EM+  G++ D  T N+L+  LC++   +EA 
Sbjct: 416 LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAE 475

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL       F P  +SY  ++  + K  +   ++ +   M ++   P+ +TY  LI+G+
Sbjct: 476 ELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535

Query: 485 GYGGWRAEAMELANALVSMHAISRDT 510
              G   EA++  N L+ M  +  DT
Sbjct: 536 STMGKLTEAIDKLNELMEMGLVPDDT 561



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 187/394 (47%), Gaps = 21/394 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   R G+ +E+L  +E M   G  PDV+    LI    +     KA  +M+ + + G
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + D F  N L+   CK  + E A ++L     RGF PD V+Y  ++ +       E A 
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE---MGM-------------- 204
            ++D++++    P++ TY  LI+     G+  +A+  L+E   MG+              
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAY 570

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G + +AFQF   +     +PDV++ N L+  L   G+ E+  KL    + +G + +V
Sbjct: 571 CKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV 630

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+ LI +LC+D   + A+      + +GL PD ++Y+ L+SA  + GR   A + L  
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP--NVSSYNTMFSALWSS 382
           +   G L     Y +I ++  +     +  E+   +  VG     +  SYN     L   
Sbjct: 691 LNESGKLYGRFFYPSIKSS-VEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIG 749

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           G    A  ++ EM+ KG+  D  TY +L+  L +
Sbjct: 750 GQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 23/265 (8%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           + +  LIK     GK  E++  +  ++  G  PD      +I  + +E    KA +   +
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNK 585

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E   +PDV   N L++G C   ++E A K+ +    +G   DV+TYN +I +LC    
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDND 645

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF-- 214
           +++A + F  +     +P V TY +L+ A    G++ +A K+L ++    K + G+ F  
Sbjct: 646 VDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK-LYGRFFYP 704

Query: 215 ---QFVRSLESRGCQPDVIS---------------YNMLLRTLLNMGKWEEGEKLMTEMI 256
                V ++E+ G  P+V S               YN  ++ L   G+ +E + ++ EM+
Sbjct: 705 SIKSSVEAVET-GKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMM 763

Query: 257 SRGLEPNVVTYSILISSLCRDGKTE 281
            +G+  +  TY  L+  L +  K +
Sbjct: 764 QKGMSVDNSTYITLMEGLIKRQKRQ 788


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 224/464 (48%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A G  P V+    ++    ++R+  +A+R+ E +++   P+V  Y
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTY 407

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+  ++  A ++ D +   G  P+V+T NIMI  LC    +E A  +F+ +  
Sbjct: 408 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 467

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMVGQ 212
             C P  +T++ LI      G+ D A  L ++M  C                 K G    
Sbjct: 468 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 527

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +   GC PD+   N  +  +   G+ E+G  L  E+ + G  P+  +YSILI 
Sbjct: 528 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 587

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +  ++  A KE+G   D ++Y+ +I  +CK G+++ A + L+ M   G  P
Sbjct: 588 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 647

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 648 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 707

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   ++EA+     M+  +  P  I+Y+I+I G C+ 
Sbjct: 708 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 767

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M + G KPN  TY  +I G+   G   EA  L
Sbjct: 768 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 811



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 222/489 (45%), Gaps = 54/489 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AGK D S  F   M ++G  PD V  T +I    +  + ++AV + E LE+  + P  +
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN +I G+  A + + A  +L+R +++G  P V+ YN ++  L  +  +E A ++F+++
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------- 202
            RD   P V TY ILI     EG+ + A+++ D+M                         
Sbjct: 397 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455

Query: 203 ---------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
                                      G+ K G V  A+     +   G  P  I Y  L
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +R+    G+ E+G K+  EM+  G  P++   +  +  + + G+TE    + R     G 
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PDA SY  LI    K G  +   E    M   GC+ D   YN ++  FCK+G  ++A +
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + E++   G PP V +Y ++   L        A  +  E  S GI+ + + Y+SLI    
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G +DEA  ++ ++      P V ++N ++    K   INE++    +M +  C PN+ 
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 476 TYVLLIEGI 484
           TY +LI G+
Sbjct: 756 TYSILINGL 764



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 223/450 (49%), Gaps = 19/450 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D  L     M   G + +V + T LI+ F +E + + A+ +++ ++    + D+  YN  
Sbjct: 212 DPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVC 271

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I  F KA +++++ K    ++S G  PD VTY  MIG LC    ++ A ++F+QL ++  
Sbjct: 272 IDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRK 331

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQ 215
            P    Y  +I      G+ D+A  LL+                    + KK  V +A +
Sbjct: 332 VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALR 391

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               ++ R   P+V +YN+L+  L   GK     ++  +M   GL PNV+T +I+I  LC
Sbjct: 392 IFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLC 450

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +  K E+A  +     +K  TP+A ++  LI    K GR+D A    + M+  G +P  +
Sbjct: 451 KAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI 510

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y +++ +F K G  +   +I++++   GC P+++  NT    ++ +G+  +   +  E+
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 570

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            + G  PD  +Y+ LI  L + G+ +E   L   M+         +YN +I GFCK+ ++
Sbjct: 571 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 630

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           N++ ++L  M  KG  P   TY  +I+G+ 
Sbjct: 631 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 231/496 (46%), Gaps = 27/496 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LI    R GK + +L   + M   G  P+V+    +I +  + +K  +A  + E ++ K 
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   +++LI G  K  +++ A  + +++   G  P  + Y  +I S    G  E   
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K++ +++   C P +      +      G+T+K   L  E+                 G+
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G+  + ++   +++ +GC  D  +YN ++      GK  +  +L+ EM  +G  P V
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY  +I  L +  + ++A  +   AK  G+  +   Y  LI  + K GR+D A   ++ 
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G  P++  +N +L A  K    ++AL  F+ + D+ CPPN  +Y+ + + L     
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EM   G++P+ ITY ++IS L + G + EA GL    ++    P   SYN 
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     +  ++  +      KGC  +  T V+L++ +     +AE +E A A+V   
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL----HKAECLEQA-AIVG-- 882

Query: 505 AISRDTFK--RLNRTF 518
           A+ ++T K    +R+F
Sbjct: 883 AVLKETAKSQHASRSF 898



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 179/390 (45%), Gaps = 19/390 (4%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L++   K+ ++  A  ++  +R   F P    Y I+IG+L      +    +F Q+    
Sbjct: 166 LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELG 225

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +  V  +T LI+    EG+ D A+ LLDEM                  +S     D++ 
Sbjct: 226 YEVNVHLFTTLIRVFAREGRVDAALSLLDEM------------------KSNSLDADIVL 267

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+ +      GK +   K   EM S GL P+ VTY+ +I  LC+  + ++AV++    +
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLE 327

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           +    P AY+Y+ +I  Y   G+ D A   L+   + G +P ++ YN IL    K    +
Sbjct: 328 QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE 387

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL IFE++     P NV +YN +   L   G    AL +  +M   G+ P+ +T N +I
Sbjct: 388 EALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMI 446

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+   ++EA  +   M+     P  ++++ +I G  K  R++++  +   M + G  
Sbjct: 447 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 506

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P    Y  LI      G + +  ++   +V
Sbjct: 507 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 19/361 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+  F+ G+ ++     + MV  GC PD+ +    +   F+  ++ K   +   + 
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G  PD  +Y+ LI G  KA       ++   ++ +G   D   YN +I   C  G + 
Sbjct: 572 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A+++ +++      PTV+TY  +I                   G+ K   + +A+    
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVID------------------GLAKIDRLDEAYMLFE 673

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S G + +V+ Y+ L+     +G+ +E   +M E++ +GL PNV T++ L+ +L +  
Sbjct: 674 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 733

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A+   ++ K+    P+  +Y  LI+  C+  + + A  F   M   G  P+ + Y 
Sbjct: 734 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 793

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++   K GN  +A  +F +    G  P+ +SYN M   L S+   + A  +  E   K
Sbjct: 794 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 853

Query: 399 G 399
           G
Sbjct: 854 G 854



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 2/283 (0%)

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           FQ+      +   P+  +YN LL  +    +++  E+++ EM   G  P+      L+++
Sbjct: 112 FQWAEKQTEKVHCPE--AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVAN 169

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             +  K  +A D+++  ++    P   +Y  LI A  +    D  +     M   G   +
Sbjct: 170 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN 229

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  + T++  F + G  D AL + +++       ++  YN        +G    +     
Sbjct: 230 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFH 289

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM S G+ PD++TY S+I  LC+   +DEAV L   +E  R  P   +YN +I+G+    
Sbjct: 290 EMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAG 349

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +E+  +L     KG  P+   Y  ++  +G      EA+ +
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 392



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 12/266 (4%)

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK---EKGL 295
           +L  G W  G  L   + + G +P      ++I  L R      AV+  + A+   EK  
Sbjct: 69  ILESGPW--GPTLENSLSALGEKP---LPELVIGVLKRLKDANTAVNYFQWAEKQTEKVH 123

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC-KNGNADQAL 354
            P+AY  + L+    ++   D     L+ M   G  P   N +  L A C K+    +A 
Sbjct: 124 CPEAY--NSLLMVMARNTEFDHLERILEEMSLSGFGPS-SNISIELVANCVKSRKLREAF 180

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           +I + +      P  S+Y  +  AL    +    L +  +M   G E +   + +LI   
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R+G VD A+ LL +M+S      ++ YN+ I  F K  +++ S +    M   G  P++
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            TY  +I  +       EA+EL   L
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQL 326


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 237/452 (52%), Gaps = 26/452 (5%)

Query: 33  FDVKET--QFMKLIKRSFRAGKFDESLYFIESMVAN---GCKPDVVMCTKLIKKFFQERK 87
           F  K+T   F  ++    + G F+ +L F   +VA+      P+ +    +IK   +   
Sbjct: 126 FQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGL 185

Query: 88  SNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            +KA+ V  EI  +   PD + Y+ L+ G CK  +I+ A  +LD ++  G  P++V +N+
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I +LC +G +  A K+ D +    C P  +TY  L+    L+G+ +KA+ LL++M    
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM---- 301

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                          S  C P+ +++  L+   +  G+  +G +++  + +RG   N   
Sbjct: 302 --------------VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS LIS LC++GK   A+++ +    KG  P+   Y  LI   C++G+LD A  FL  M 
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G LP+   Y++++  + + G++ +A+ +++++++  C  N   Y+ + + L   G  +
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNI 444
            AL +  +MLS+GI+ D + Y+S+I   C   +V++ + L   M  +    +P VI+YNI
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           ++  FC  + I  +I++L  M ++GC P+  T
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 200/382 (52%), Gaps = 20/382 (5%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E  N V+   +S    P+ +T+N++I ++C  G+++ A +VF ++   NC P   TY+ 
Sbjct: 152 LEFYNHVVAS-KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYST 210

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           L+     E + D+A+ LLDEM                  +CKKG +G+A + V ++  +G
Sbjct: 211 LMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKG 270

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P+ ++YN L+  L   GK E+   L+ +M+S    PN VT+  LI+     G+  D  
Sbjct: 271 CVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGT 330

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            VL + + +G   + Y Y  LIS  CK+G+ + A+E    M+  GC P+ + Y+ ++   
Sbjct: 331 RVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+ G  D+A     ++ + G  PN  +Y+++    + +GD  +A+ +  EM +     +E
Sbjct: 391 CREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNE 450

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           + Y+ LI+ LC+DG   EA+ +   M S   +  V++Y+ +I GFC    + + +++   
Sbjct: 451 VCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQ 510

Query: 465 MFEKG--CKPNETTYVLLIEGI 484
           M  +G   +P+  TY +L+   
Sbjct: 511 MLCQGPVVQPDVITYNILLNAF 532



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRD---NCKPTVITYTILIQATMLEGQTDKAMK 197
           V ++N ++  +   G+   A + ++ ++     N  P  +T+ ++I+A            
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKA------------ 179

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                 MC+ G+V +A +  R +  R C PD  +Y+ L+  L    + +E   L+ EM  
Sbjct: 180 ------MCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQV 233

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G  PN+V +++LIS+LC+ G    A  ++     KG  P+  +Y+ L+   C  G+L+ 
Sbjct: 234 EGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEK 293

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+  L+ M+S+ C+P+ V + T++  F   G A     +   L   G   N   Y+++ S
Sbjct: 294 AVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLIS 353

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L   G   +A+ +  EM+ KG  P+ I Y++LI  LCR+G +DEA G L +M++  + P
Sbjct: 354 GLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              +Y+ ++ G+ +    +++I V   M    C  NE  Y +LI G+   G   EA+ + 
Sbjct: 414 NSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVW 473

Query: 498 NALVS 502
             ++S
Sbjct: 474 KQMLS 478



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 206/500 (41%), Gaps = 113/500 (22%)

Query: 15  RVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
            V  S S    PN   L+F++       +IK   R G  D+++     +    C PD   
Sbjct: 157 HVVASKSLNIHPNA--LTFNL-------VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYT 207

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLR 133
            + L+    +E + ++AV +++ ++  G  P++ A+N LIS  CK   +  A K++D + 
Sbjct: 208 YSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMF 267

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +G  P+ VTYN ++  LC +G +E A  + +Q++ + C P  +T+  LI   +++G+  
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRAS 327

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
              ++L  +                 G+CK+G   QA +  + +  +GC P+ I Y+ L+
Sbjct: 328 DGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALI 387

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS---------------------------- 268
             L   GK +E    ++EM ++G  PN  TYS                            
Sbjct: 388 DGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCI 447

Query: 269 -------ILISSLCRDGKTEDAVDVLRAAKEKGL-------------------------- 295
                  ILI+ LC+DGK  +A+ V +    +G+                          
Sbjct: 448 HNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKL 507

Query: 296 -----------TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
                       PD  +Y+ L++A+C    +  AI+ L+ M+  GC PD +  +  L   
Sbjct: 508 FNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTL 567

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            +N N  Q    F               + +   L      I A  +I  M+ K + P  
Sbjct: 568 RENMNPPQDGREF--------------LDELVVRLVKRQRTIGASKIIEVMMHKFLLPKA 613

Query: 405 ITYNSLISCLCRDGMVDEAV 424
            T+  ++  +C+   V +A+
Sbjct: 614 STWAMVVQQVCKPKNVRKAI 633



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKL--- 360
           +  AY K    + A++    M  +  C   + ++N++L    + G  ++ALE +  +   
Sbjct: 102 MFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVAS 161

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
             +   PN  ++N +  A+   G   +A+ +  E+  +   PD  TY++L+  LC++  +
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEAV LL +M+     P ++++N++I   CK   +  + +++  MF KGC PNE TY  L
Sbjct: 222 DEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRD-TFKRLNRTF 518
           + G+   G   +A+ L N +VS   +  D TF  L   F
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGF 320


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 228/459 (49%), Gaps = 29/459 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----PD 105
           AG+ D     + +++  G   D +  T ++K    +++++ A+ +  +L +  +    P+
Sbjct: 104 AGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI--VLRRMTQLGCIPN 161

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKV 163
           VF+YN L+ G C  N+ + A ++L  +   G    PDVV+Y  +I      G ++ A+  
Sbjct: 162 VFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           + ++L     P V+TY+ +I A       DKAM++L  M                 G C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G   +A  F++ + S G +PDV++YN L+  L   G+  E  K+   M  RGL+P + T
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y  L+      G   +   +L      G+ P+ Y +  LI AY K G++D A+     M 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--WSSGD 384
             G  PD V Y T++   CK+G  + A+  FE++ D    P    YN++  +L  +   D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWD 461

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
           K + L  I EML +GI  D I +NS+I   C++G V E+  L   M     +P +I+Y+ 
Sbjct: 462 KAKEL--ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I G+C   +++E+ ++LA+M   G KP+  TY  LI G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 237/462 (51%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G  D++      M+  G  P+VV  + +I    + +  +KA+ V+  + 
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   YN+++ G+C + Q + A   L ++ S G  PDVVTYN ++  LC  G   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD + +   KP + TY  L+Q    +G   +   LLD M              VR
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 367

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           +    G  P+   +++L+      GK ++   + ++M  +GL P+ VTY  +I  LC+ G
Sbjct: 368 N----GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA+       ++ L+P    Y+ LI + C   + D A E +  M+  G   D + +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +I+ + CK G   ++ ++F+ +  +G  P++ +Y+T+      +G    A  +++ M+S 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD +TYN+LI+  C+   +++A+ L  +MES+   P +I+YNII+ G  +TRR   +
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+   + E G +   +TY +++ G+       EA+ +   L
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 224/445 (50%), Gaps = 21/445 (4%)

Query: 55  ESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNA 111
           E+L  ++ M  +G  C PDVV  T +I  FF+E   +KA     E+L++   P+V  Y++
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  CKA  ++ A +VL  +   G  P+  TYN ++   CS G  + A     ++  D 
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+TY  L+                    +CK G   +A +   S+  RG +P++ +
Sbjct: 300 VEPDVVTYNSLMDY------------------LCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  LL+     G   E   L+  M+  G+ PN   +SILI +  + GK + A+ V    +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++GL PD  +Y  +I   CK GR++ A+ + + MI +   P  + YN+++ + C     D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWD 461

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+  ++ D G   +   +N++  +    G  I +  +   M+  G++PD ITY++LI
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C  G +DEA  LL  M S   +P  ++YN +I G+CK  R+ +++ +   M   G  
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P+  TY ++++G+      A A EL
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D+++  + SMV NG  P+      ++  +    +  +A+  ++ +   G EPDV 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+L+   CK  +   A K+ D +  RG  P++ TY  ++    ++G +     + D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           +R+   P    ++ILI A   +G+ D+AM +  +M                  +CK G V
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A ++   +      P  I YN L+ +L    KW++ ++L+ EM+ RG+  + + ++ +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I S C++G+  ++  +       G+ PD  +Y  LI  YC  G++D A + L  M+S G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD V YNT++  +CK    + AL +F ++   G  P++ +YN +   L+ +     A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    ++NI+I    
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R +E+ ++ AA+   G  P+  TY L+ E +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 186/384 (48%), Gaps = 21/384 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P++  Y  L+   C A +++L    L  +  +GF  D + +  M+  LC+      A   
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++ +  C P V +Y IL++                  G+C      +A + ++ +  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLK------------------GLCDDNRSQEALELLQMMPD 190

Query: 223 RG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            G  C PDV+SY  ++      G  ++      EM+ RG+ PNVVTYS +I++LC+    
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A++VL +  + G+ P+  +Y+ ++  YC  G+   AI FL  M SDG  PD+V YN++
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CKNG   +A ++F+ ++  G  P +++Y T+     + G  +   G++  M+  GI
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+   ++ LI    + G VD+A+ +   M      P  ++Y  +I   CK+ R+ +++ 
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
               M ++   P    Y  LI  +
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 153/283 (54%), Gaps = 13/283 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P++ +Y +L+ +    G+ + G   +  +I +G   + + ++ ++  LC D +T DA+D 
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYNTILAA 343
           VLR   + G  P+ +SY+ L+   C D R   A+E L  M  DG  C PD+V+Y T++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           F K G+ D+A   + ++ D G  PNV +Y+++ +AL  +    +A+ +++ M+  G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYNS++   C  G   EA+G L  M S    P V++YN ++   CK  R  E+ ++  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           +M ++G KP  TTY  L++G    G          ALV MH +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKG----------ALVEMHGL 361



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 40/295 (13%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP+  +Y 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
            L+ + C  GRLDL                AI F                    L  M  
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDK 385
            GC+P++ +YN +L   C +  + +ALE+ + + D G  CPP+V SY T+ +  +  GD 
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A G   EML +GI P+ +TY+S+I+ LC+   +D+A+ +L  M      P   +YN I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + G+C + +  E+I  L  M   G +P+  TY  L++ +   G   EA ++ +++
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 229/457 (50%), Gaps = 19/457 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + K+++      +F+++L     MV +   P ++  T+L+    +  + +  + + E 
Sbjct: 49  SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 98  LEKYGEPDVFAY-NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G P +    N ++   C ++Q   A+  L ++   GF PD+VT+  ++   C    
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           IE A  +FDQ+L    KP V+TYT LI+        + A++L ++MG             
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG------------- 215

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                + G +P+V++YN L+  L  +G+W +   L+ +M+ R +EPNV+T++ LI +  +
Sbjct: 216 -----TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GK  +A ++     +  + PD ++Y  LI+  C  G LD A +    M  +GC P+ V 
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y T++  FCK+   +  ++IF ++S  G   N  +Y  +       G    A  + ++M 
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S+   PD  TYN L+  LC +G V++A+ +   M        +++Y III G CK  ++ 
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  ++F KG KPN  TY  +I G    G   EA
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 18/346 (5%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  +F +++     P++I +T L+       + D  + L ++M                 
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM----------------- 109

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +  G  P + + N+++  +    +       + +M+  G EP++VT++ L++  C   +
Sbjct: 110 -QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            EDA+ +       G  P+  +Y  LI   CK+  L+ A+E  + M ++G  P++V YN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   C+ G    A  +   +      PNV ++  +  A    G  + A  + + M+   
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD  TY SLI+ LC  G++DEA  +   ME     P  + Y  +I GFCK++R+ + +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           ++   M +KG   N  TY +LI+G    G    A E+ N + S  A
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 70/165 (42%)

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y  IL     N   + AL++F ++      P++  +  + S +         + +  +M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              GI P   T N ++ C+C       A   L  M    F P ++++  ++ G+C   RI
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            ++I +   +   G KPN  TY  LI  +        A+EL N +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 225/483 (46%), Gaps = 59/483 (12%)

Query: 78  LIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+      RK ++A+R+  E+L     P+   YN LI GFCK  Q+  A  V   ++S G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+  T N ++  LC  G + SA K+F ++      PT  ++ IL++   + G+   A+
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 197 KLLDEM-----------------GMC----KKGMVGQAFQFVRSLESRG----------- 224
             L +M                 G+C        + QA +F + +++ G           
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 225 ---------------------CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
                                C PD+++YN+L+     +G+  E + LM E++  G EPN
Sbjct: 183 LSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN 242

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V TYSI+I+  C+  K E+A +V     E    P+A +++ LI+ +CK G L+ AI+   
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 302

Query: 324 YMISDGCLPDIVNYNTILAAFCKN-GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            M   GC   IV YNT++ + CK  G    A+++F KL   G  P + +YN++      +
Sbjct: 303 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                A+    EM  K   P+ ITY+ LI  LC+   + EA   L DM++  + PTV++Y
Sbjct: 363 RRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +I GFCK   +  ++     M   GC PN   +  LI+G+       + + L   L  
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL---LCH 478

Query: 503 MHA 505
           MHA
Sbjct: 479 MHA 481



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 25/414 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           A + ++++ F + M A+G +PD+     L+       +  +A  +   +     PD+  Y
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT--CSPDIMTY 211

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G+CK  Q   A  ++  +   G+ P+V TY+I+I   C    +E A++VF +++ 
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            NC P  +T+  LI                   G CK GM+  A +    +E  GC+  +
Sbjct: 272 SNCVPNAVTFNTLIA------------------GFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 230 ISYNMLLRTLLNM-GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           ++YN L+ +L    G       L  ++   GL P +VTY+ LI   C   +  +A+    
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFD 373

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             + K   P+  +Y  LI   CK  R+  A + L+ M + G  P +V Y  ++  FCK G
Sbjct: 374 EMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
               AL  FEK+   GC PN   +NT+   L  +      L ++  M ++G +PD ITYN
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
            LIS LC    V++A  L   M      P V ++N +I G C  +++ E+  +L
Sbjct: 493 CLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 209/432 (48%), Gaps = 61/432 (14%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF----- 164
           NAL+SG   A + + A ++   + +  F+P+  TYN++I   C  G +  A  VF     
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 165 ----------DQLLRDNCK--------------------PTVITYTILIQATMLEGQTDK 194
                     + LL   C+                    PT  ++ IL++   + G+   
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 195 AMKLLDEM-----------------GMC----KKGMVGQAFQFVRSLESRGCQPDVISYN 233
           A+  L +M                 G+C        + QA +F + +++ G +PD+ SY+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +LL  L + G+  E   L + M      P+++TY++L+   C+ G+T +A  +++   + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  P+ ++Y  +I+ YCK  +++ A E    MI   C+P+ V +NT++A FCK G  + A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSS-GDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           +++F ++  +GC   + +YNT+  +L    G    A+ + +++   G+ P  +TYNSLI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C    + EA+    +ME  +  P VI+Y+I+I G CK RR+ E+ + L  M   G  P
Sbjct: 358 GFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 473 NETTYVLLIEGI 484
              TY  LI G 
Sbjct: 417 TVVTYGGLINGF 428



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 213/458 (46%), Gaps = 32/458 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAY 109
           G+   +L     M A    P       L++ FF   +   A+  ++ + K         Y
Sbjct: 81  GQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTY 140

Query: 110 NALISGFC----KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           N ++ G C     AN++E A +    +++ G  PD+ +Y+I++ +L   G +  A  +F 
Sbjct: 141 NLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS 200

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            +    C P ++TY +L+      GQT +A  L+ E+                   CK  
Sbjct: 201 AM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLD 257

Query: 209 MVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            V +A++ F++ +ES  C P+ +++N L+      G  E+  KL  EM   G +  +VTY
Sbjct: 258 KVEEAWEVFMKMIESN-CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 316

Query: 268 SILISSLCRD-GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           + LI SLC+  G    AVD+    +  GLTP   +Y+ LI  +C   RL  A+++ D M 
Sbjct: 317 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM- 375

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
              C P+++ Y+ ++   CK     +A +  E +   G  P V +Y  + +     G+  
Sbjct: 376 EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELK 435

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL    +M   G  P+ + +N+LI  LC+    ++ + LL  M +   +P VI+YN +I
Sbjct: 436 SALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLI 495

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            G C   R+ ++  +   M    C PN TT+  LI G+
Sbjct: 496 SGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGL 530



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 24/286 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVMEIL 98
           F  LI    +AG  ++++     M   GCK  +V    LI    ++R     AV +   L
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           E  G  P +  YN+LI GFC A ++  A +  D +  +  +P+V+TY+I+I  LC    +
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRM 399

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + A K  + +      PTV+TY  LI                   G CK G +  A  F 
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLIN------------------GFCKCGELKSALLFF 441

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             ++  GC P+ + +N L+  L    +  +G +L+  M + G +P+V+TY+ LIS LC  
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA 501

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            + EDA    R        P+  +++ LI   C   +++ A   LD
Sbjct: 502 NRVEDAQ---RLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + L+S      + D A+     +++    P+   YN ++  FCK G   QA+ +F  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  PN S+ NT+   L   G    AL +  EM +    P   ++N L+      G V +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFC----KTRRINESIEVLAAMFEKGCKPNETTYV 478
           A+  L DM  +       +YN+++ G C       R+ +++E    M   G +P+  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 479 LLIEGIGYGGWRAEAMELANAL-----VSMHAISRDTFKRLNRTFPLLDVYKEI 527
           +L+  +   G  AEA  L +A+     +  + +  D + ++ +T+    + KEI
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 4/150 (2%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  +A+T  +     +      +  LI    + G+   +L F E M   GC P+ V+  
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFN 457

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    +  ++N  +R++  +   G +PDV  YN LISG C AN++E A ++ D +   
Sbjct: 458 TLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMAC- 516

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
             +P+V T+N +I  LC++  +E A  + D
Sbjct: 517 --APNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 226/434 (52%), Gaps = 29/434 (6%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNAL 112
           F  S Y+   + A  CKP ++   K      + R ++      E++ +  +P+VF +N +
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLK------ENRSADVEYVYKEMIRRKIQPNVFTFNVV 229

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---SRGMIESAFKVFDQLLR 169
           I+  CK  ++  A  V++ ++  G SP+VV+YN +I   C     G +  A  V  +++ 
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           ++  P + T+ ILI     +     +MK+  EM                    +  +P+V
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM------------------LDQDVKPNV 331

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ISYN L+  L N GK  E   +  +M+S G++PN++TY+ LI+  C++   ++A+D+  +
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K +G  P    Y+ LI AYCK G++D      + M  +G +PD+  YN ++A  C+NGN
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + A ++F++L+  G  P++ +++ +       G+  +A  ++ EM   G++P  +TYN 
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 410 LISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++   C++G +  A  +   ME   R R  V SYN+++ G+ +  ++ ++  +L  M EK
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 469 GCKPNETTYVLLIE 482
           G  PN  TY ++ E
Sbjct: 571 GLVPNRITYEIVKE 584



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 192/400 (48%), Gaps = 30/400 (7%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGF 116
           Y  + M+    +P+V     +I    +  K NKA  VME ++ YG  P+V +YN LI G+
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268

Query: 117 CK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           CK     ++  A+ VL  +     SP++ T+NI+I        +  + KVF ++L  + K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P VI+Y  LI      G+  +A+ + D+M                 G CK  M+ +A   
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
             S++ +G  P    YNML+     +GK ++G  L  EM   G+ P+V TY+ LI+ LCR
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  E A  +      KGL PD  ++  L+  YC+ G    A   L  M   G  P  + 
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507

Query: 337 YNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           YN ++  +CK GN   A  +  ++  +     NV+SYN +       G    A  +++EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
           L KG+ P+ ITY      + ++ MVD+  G + D+E   F
Sbjct: 568 LEKGLVPNRITYE-----IVKEEMVDQ--GFVPDIEGHLF 600



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 222/491 (45%), Gaps = 50/491 (10%)

Query: 5   VSCINPKSNERVRVSSSAETRPNTHL--LSFDVKETQF-------MKLIKRSFRAGKFDE 55
           V+ INP  NE  R   S+E  P+  L   S+ VK +          KL+     A ++ +
Sbjct: 62  VTDINP--NELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSK 119

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISG 115
              F++  V NG    V          F        V V  I+           + L+  
Sbjct: 120 IRSFLDGFVRNGSDHQV-------HSIFHAISMCDNVCVNSIIA----------DMLVLA 162

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           +   ++ EL  +   R    G+    ++   ++ +L           V+ +++R   +P 
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           V T+ ++I A                  +CK G + +A   +  ++  GC P+V+SYN L
Sbjct: 223 VFTFNVVINA------------------LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264

Query: 236 LRTLLNMG---KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           +     +G   K  + + ++ EM+   + PN+ T++ILI    +D     ++ V +   +
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           + + P+  SY+ LI+  C  G++  AI   D M+S G  P+++ YN ++  FCKN    +
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL++F  +   G  P    YN +  A    G       +  EM  +GI PD  TYN LI+
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LCR+G + EA   L D  +++  P +++++I++ G+C+     ++  +L  M + G KP
Sbjct: 445 GLCRNGNI-EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

Query: 473 NETTYVLLIEG 483
              TY ++++G
Sbjct: 504 RHLTYNIVMKG 514



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 157/286 (54%), Gaps = 10/286 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L +  C+P       L+  LL   +  + E +  EMI R ++PNV T++++I++LC+ GK
Sbjct: 186 LSALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGK 238

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK---DGRLDLAIEFLDYMISDGCLPDIVN 336
              A DV+   K  G +P+  SY+ LI  YCK   +G++  A   L  M+ +   P++  
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++  F K+ N   ++++F+++ D    PNV SYN++ + L + G    A+ M  +M+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G++P+ ITYN+LI+  C++ M+ EA+ +   ++     PT   YN++I  +CK  +I+
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   +   M  +G  P+  TY  LI G+   G    A +L + L S
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)

Query: 30  LLSFDVKET--QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +L  DVK     +  LI      GK  E++   + MV+ G +P+++    LI  F +   
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381

Query: 88  SNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
             +A+ +   ++  G  P    YN LI  +CK  +I+    + + +   G  PDV TYN 
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           +I  LC  G IE+A K+FDQL      P ++T+ IL++    +G++ KA  LL EM    
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 203 -------------GMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEG 248
                        G CK+G +  A      +E  R  + +V SYN+LL+     GK E+ 
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             L+ EM+ +GL PN +TY I+   +   G   D
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 5/248 (2%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N +   +L+ +   + + E   +  + +   G    A S  PL+ A  K+ R    +E++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR-SADVEYV 210

Query: 323 -DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM---FSA 378
              MI     P++  +N ++ A CK G  ++A ++ E +   GC PNV SYNT+   +  
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +G   +A  ++ EM+   + P+  T+N LI    +D  +  ++ +  +M     +P 
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           VISYN +I G C   +I+E+I +   M   G +PN  TY  LI G        EA+++  
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 499 ALVSMHAI 506
           ++    A+
Sbjct: 391 SVKGQGAV 398



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK D+     E M   G  PDV     LI    +      A ++ + L   G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD+  ++ L+ G+C+  +   A  +L  +   G  P  +TYNI++   C  G +++A  
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 163 VFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ--AFQFVR- 218
           +  Q+ ++   +  V +Y +L+Q    +G+ + A  LL+E  M +KG+V     ++ V+ 
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE--MLEKGLVPNRITYEIVKE 584

Query: 219 SLESRGCQPDV 229
            +  +G  PD+
Sbjct: 585 EMVDQGFVPDI 595


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 227/457 (49%), Gaps = 19/457 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + ++++   R  K D+SL     MV     P +   ++L+    + +K +  + + E 
Sbjct: 47  SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106

Query: 98  LEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G P ++   N L++ FC+ +Q+ LA   L ++   G  P +VT+  ++   C    
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A  +FDQ++    KP V+ Y  +I                   G+CK   V  A   
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIID------------------GLCKSKQVDNALDL 208

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +  +E  G  PDV++YN L+  L + G+W +  ++++ M  R + P+V T++ LI +  +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+  +A +       + L PD  +Y  LI   C   RLD A E   +M+S GC PD+V 
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+ ++  +CK+   +  +++F ++S  G   N  +Y  +      +G    A  +   M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P+ ITYN L+  LC +G +++A+ +L DM+       +++YNIII G CK   + 
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ ++  ++  +G  P+  TY  ++ G+   G R EA
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 19/436 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L+    +  K+D  +Y  E M   G   ++  C  L+  F +  + + A+  +  + 
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G EP +  + +L++GFC+ +++  A  + D++   G+ P+VV YN +I  LC    ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A  + +++ +D   P V+TY  LI                   G+C  G    A + V 
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLIS------------------GLCSSGRWSDATRMVS 245

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  R   PDV ++N L+   +  G+  E E+   EMI R L+P++VTYS+LI  LC   
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A ++      KG  PD  +Y  LI+ YCK  +++  ++    M   G + + V Y 
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +C+ G  + A EIF ++   G  PN+ +YN +   L  +G   +AL ++++M   
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++ D +TYN +I  +C+ G V +A  +   +      P + +Y  ++LG  K     E+
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485

Query: 459 IEVLAAMFEKGCKPNE 474
             +   M E G  PNE
Sbjct: 486 DALFRKMKEDGILPNE 501



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 18/345 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ +  +F  +++    P++  ++ L+ A     + D  + L ++M M            
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM------------ 109

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                  G   ++ + N+LL       +       + +MI  G EP++VT+  L++  CR
Sbjct: 110 ------LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  DA+ +       G  P+   Y+ +I   CK  ++D A++ L+ M  DG  PD+V 
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN++++  C +G    A  +   ++     P+V ++N +  A    G    A     EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            + ++PD +TY+ LI  LC    +DEA  +   M S    P V++Y+I+I G+CK++++ 
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +++   M ++G   N  TY +LI+G    G    A E+   +V
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 5/290 (1%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            F F R   S G       Y  +LR  +   K ++   L   M+     P++  +S L+S
Sbjct: 35  GFCFSRRAYSNGSD-----YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLS 89

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           ++ +  K +  + +    +  G+  +  + + L++ +C+  +L LA+ FL  MI  G  P
Sbjct: 90  AISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEP 149

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            IV + ++L  FC+      AL +F+++  +G  PNV  YNT+   L  S     AL ++
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + M   GI PD +TYNSLIS LC  G   +A  ++  M      P V ++N +I    K 
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            R++E+ E    M  +   P+  TY LLI G+       EA E+   +VS
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 19/248 (7%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RVS + E        S D     +  LI       + DE+      MV+ GC PDVV  +
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI  + + +K    +++  E+ ++    +   Y  LI G+C+A ++ +A ++  R+   
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+++TYN+++  LC  G IE A  +   + ++     ++TY I+I+           
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR----------- 439

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  GMCK G V  A+    SL  +G  PD+ +Y  ++  L   G   E + L  +M
Sbjct: 440 -------GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492

Query: 256 ISRGLEPN 263
              G+ PN
Sbjct: 493 KEDGILPN 500


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 209/406 (51%), Gaps = 20/406 (4%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K  R +E+L +   P+   YN +I+GFC   +++ A  ++  +R RG  +P+  TY  
Sbjct: 167 AGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 226

Query: 147 MIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G ++ A KVFD++L +   KP  + Y  LI                   G C
Sbjct: 227 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG------------------GYC 268

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A  +   +  RG    V +YN+L+  L   G+  E  +L+ EM  +GL  +V 
Sbjct: 269 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVF 328

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++G  + A+++      +G+     +Y  LI A  K G++    +  D  
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+V YN ++ +   +GN D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +I EM  +GI+PD +TYN+LIS     G V +A+ +  +M +  F PT+++YN +
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 508

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           I G CK  + +++  ++  M E G  P+++TY+ LIEG+     RA
Sbjct: 509 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 554



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 22/394 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++      P+ VTYN +I   CSRG +++A  +  ++ 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ D+A+K+ DEM    KG V               +P
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEV---------------KP 255

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + GK +        M+ RG+   V TY++L+ +L  DG+  +A +++
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL  D ++Y+ LI+ +CK+G +  A+E  + M   G    +V Y +++ A  K 
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +  ++F++    G  P++  YN + ++  +SG+  RA  ++ EM  K I PD++TY
Sbjct: 376 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 435

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G VDEA  L+ +M     +P +++YN +I G+     + +++ +   M  
Sbjct: 436 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           KG  P   TY  LI+G+   G   +A  +   +V
Sbjct: 496 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 191/403 (47%), Gaps = 59/403 (14%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           T F  +++    AGK   +L  +  M     +P+ V    +I  F    +   A+ +M E
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIMIGSLCSR 154
           + E+ G  P+ + Y  +ISG+CK  +++ A KV D + ++G   P+ V YN +IG  C +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----------- 203
           G +++A    D+++      TV TY +L+ A  ++G+  +A +L++EMG           
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 204 ------MCKKGMVGQAFQFVRSLESRGCQ------------------------------- 226
                  CK+G V +A +   ++  RG +                               
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 227 ----PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
               PD++ YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC  G+ ++
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  ++    ++G+ PD  +Y+ LIS Y   G +  A+   + M++ G  P ++ YN ++ 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
             CKNG  D A  + +++ + G  P+ S+Y ++   L +  ++
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 553



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F  +  +  P   +++N M   L S+G   RAL    E+L +   P+ +TYN++I+
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIA 193

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-C 470
             C  G V  A+ ++ +M E     P   +Y  +I G+CK  R++E+++V   M  KG  
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 471 KPNETTYVLLIEG 483
           KP    Y  LI G
Sbjct: 254 KPEAVMYNALIGG 266


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 251/515 (48%), Gaps = 32/515 (6%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           E  +  S++ T  +THL         +  +I +  R  + D   Y ++ M     K + V
Sbjct: 59  EYFKSLSNSGTFKHTHL--------TYETMIDKLGRNNEMDGVSYLLQQM-----KLENV 105

Query: 74  MCTKLIKKFFQE--RKSN---KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANK 127
            C++ + +F  +  R+SN   + +++   + ++G EP V  YN ++      N  ++ N 
Sbjct: 106 PCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINA 165

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           + + ++S G  P+V TYN+++ +LC  G ++ A K+  ++    C P  ++YT +I +  
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225

Query: 188 LEGQTDKAMKLLDEM------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             G  DKA +L  +             G+CK+    +AF  +  +  RG  P+VISY+ +
Sbjct: 226 KLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTV 285

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +  L +MG  E    +   M  RG  PNV T++ LI      G+  DAV +      +G+
Sbjct: 286 ISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGV 345

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +P+  +Y+ LI   C DG +D AI   + M  D   P++  Y+TI+  F K+G+   A E
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
            + K+ + GC PNV  Y  M   L       +A  +I  M+S G  P  IT+N+ I  LC
Sbjct: 406 TWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLC 465

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G V+ A+ +L  ME     P + +YN ++ G  +     E+  ++  + E+  + +  
Sbjct: 466 RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCV 525

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           TY  ++ G  + G   + ++L   ++ ++ I  DT
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKML-VNGIKLDT 559



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 217/477 (45%), Gaps = 58/477 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   + GK D +   +  M   GC PD V  T +I    +    +KA    E+  K+ 
Sbjct: 185 LLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA---RELAMKF- 240

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EP V  YNALI G CK  + + A  +++ +  RG  P+V++Y+ +I  L   G +E +  
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLA 300

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           VF ++    C+P V T+T LI+   + G+   A+ L + M              +R    
Sbjct: 301 VFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM--------------IR---- 342

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  P+V++YN L+  L + G  +E   +  +M    + PNV TYS +I    + G    
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS 402

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A +        G  P+   Y  ++   C+    D A + +D MISDGC P ++ +N  + 
Sbjct: 403 ACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE-------- 394
             C+ G  + A+ + +++    C PN+ +YN +   L+ +     A G+I E        
Sbjct: 463 GLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEF 522

Query: 395 ---------------------------MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
                                      ML  GI+ D IT N+ ++  C+ G V  A+ +L
Sbjct: 523 DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582

Query: 428 VDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            ++ + + FR  +I++ II+ G C      E++  L  M ++G  PN  T+ +L+ G
Sbjct: 583 DNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 216/452 (47%), Gaps = 52/452 (11%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L +   P    +  ++    K+        +  ++  RG  P+ V +NI+I   C  G+
Sbjct: 61  LLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGL 120

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           I  AF V  ++L+   +P  IT    I+   L+GQ  +A+   D++              
Sbjct: 121 IPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGT 180

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK G    A + +R ++ +  Q DV+ Y+ ++ ++       +   L +EM+SR 
Sbjct: 181 LINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +  N+VTYS LIS  C  GK +DA+ +      + + PD Y+++ L+ A+CK+GR+  A 
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300

Query: 320 EFLDYMISDGCLPDIVNYNT-----------------------------------ILAAF 344
             L  M+  G  PDIV YN+                                   ++  F
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK    DQA+++F+++      PNV +YN++   L  SG    AL +I  M  +G +PD 
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           ITY+S++  LC++ +VD+A+ LL+ ++    RP + +Y I+I G CK  R+ ++  +   
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +  KG      TY ++I+G    G   EA+ L
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 221/463 (47%), Gaps = 18/463 (3%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           + +F +++    ++  +   L   + M   G KP+ V    LI  F Q      A  V+ 
Sbjct: 70  DMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLA 129

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + K G EPD    N  I GFC   QI  A    D+L + GF  D V+Y  +I  LC  G
Sbjct: 130 KILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
              +A ++  ++     +  V+ Y+ +I +   +   + A  L  EM             
Sbjct: 190 ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C  G +  A      + S    PDV ++N+L+      G+ +E +  +  M+ +
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G++P++VTY+ L+   C   +   A  +L     +G+T    SY+ +I+ +CK   +D A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           ++    M      P+++ YN+++   CK+G    ALE+ + + D G  P++ +Y+++  A
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +    +A+ ++ ++  +GI P+  TY  LI  LC+ G +++A  +  D+    +  T
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           V +Y ++I GFC     +E++ +L+ M +  C P+  TY ++I
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 209/446 (46%), Gaps = 27/446 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G +PD +     IK F  + + ++A+   + L   G   D  +Y  LI+G CK  +   A
Sbjct: 135 GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 194

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L R+  +    DVV Y+ +I S+C    +  AF ++ +++       ++TY+ LI  
Sbjct: 195 LELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISG 254

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             + G+   A+ L ++M                   CK+G V +A   +  +  +G +PD
Sbjct: 255 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 314

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN L+     + +    + ++  M  RG+   V +Y+I+I+  C+    + A+ + +
Sbjct: 315 IVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFK 374

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               K + P+  +Y+ LI   CK GR+  A+E +D M   G  PDI+ Y++IL A CKN 
Sbjct: 375 EMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNH 434

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A+ +  KL D G  PN+ +Y  +   L   G    A  +  ++L KG      TY 
Sbjct: 435 LVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYT 494

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I   C  G+ DEA+ LL  M+     P  I+Y III         +++ ++L  M  +
Sbjct: 495 VMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITR 554

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAM 494
           G         LL   + YG W    M
Sbjct: 555 G---------LLYSFLEYGSWSLSFM 571



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 149/342 (43%), Gaps = 63/342 (18%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCK 118
           + +M   G    V     +I  F + +  ++A+++  E+  K   P+V  YN+LI G CK
Sbjct: 338 LNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK 397

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           + +I  A +++D +  RG  PD++TY+ ++ +LC   +++ A  +  +L     +P + T
Sbjct: 398 SGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYT 457

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLE 221
           YTILI      G+ + A  + +++                 G C  G+  +A   +  ++
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------------- 268
              C PD I+Y +++ +L +  + ++ EKL+ EMI+RGL  + + Y              
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHF 577

Query: 269 -----------------------------ILISSLCRDGKTEDAVDVLRAA---KEKGLT 296
                                        +L  S  RD   E    ++ +     ++G  
Sbjct: 578 LNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYI 637

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            D  +Y  +I  +C  G  D ++  L  M  +GC+PD V Y+
Sbjct: 638 LDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 99/221 (44%)

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DAV +      +  TP    +  ++ +  K       +     M   G  P+ VN+N ++
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC+ G    A  +  K+  +G  P+  + NT        G   +AL    ++++ G  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            D+++Y +LI+ LC+ G    A+ LL  ++    +  V+ Y+ II   CK + +N++ ++
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            + M  +    N  TY  LI G    G   +A+ L N + S
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 70/155 (45%)

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             F  N +   A+ +F  L      P    +  +  +L  S      L +  +M  +GI+
Sbjct: 43  TTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIK 102

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ + +N LI+C C+ G++  A  +L  +    + P  I+ N  I GFC   +I++++  
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              +   G   ++ +Y  LI G+   G    A+EL
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALEL 197


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 224/464 (48%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A G  P V+    ++    ++R+  +A+R+ E +++   P+V  Y
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTY 162

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+  ++  A ++ D +   G  P+V+T NIMI  LC    +E A  +F+ +  
Sbjct: 163 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 222

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMVGQ 212
             C P  +T++ LI      G+ D A  L ++M  C                 K G    
Sbjct: 223 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 282

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +   GC PD+   N  +  +   G+ E+G  L  E+ + G  P+  +YSILI 
Sbjct: 283 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 342

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +  ++  A KE+G   D ++Y+ +I  +CK G+++ A + L+ M   G  P
Sbjct: 343 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 402

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 462

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+N L+  L +   ++EA+     M+  +  P  I+Y+I+I G C+ 
Sbjct: 463 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 522

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M + G KPN  TY  +I G+   G   EA  L
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 224/507 (44%), Gaps = 64/507 (12%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK----------FFQERKSNK 90
           ++L+    ++ K  E+   I++M     +P     T LI K            +  + ++
Sbjct: 14  IELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDE 73

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV + E LE+  + P  +AYN +I G+  A + + A  +L+R +++G  P V+ YN ++ 
Sbjct: 74  AVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 133

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            L  +  +E A ++F+++ RD   P V TY ILI     EG+ + A+++ D+M       
Sbjct: 134 CLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 192

Query: 203 ---------------------------------------------GMCKKGMVGQAFQFV 217
                                                        G+ K G V  A+   
Sbjct: 193 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 252

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +   G  P  I Y  L+R+    G+ E+G K+  EM+  G  P++   +  +  + + 
Sbjct: 253 EKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKA 312

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+TE    + R     G  PDA SY  LI    K G  +   E    M   GC+ D   Y
Sbjct: 313 GETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 372

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++  FCK+G  ++A ++ E++   G PP V +Y ++   L        A  +  E  S
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI+ + + Y+SLI    + G +DEA  ++ ++      P V ++N ++    K   INE
Sbjct: 433 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 492

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++    +M +  C PN+ TY +LI G+
Sbjct: 493 ALICFQSMKDLKCPPNQITYSILINGL 519



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 231/496 (46%), Gaps = 27/496 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LI    R GK + +L   + M   G  P+V+    +I +  + +K  +A  + E ++ K 
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   +++LI G  K  +++ A  + +++   G  P  + Y  +I S    G  E   
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K++ +++   C P +      +      G+T+K   L  E+                 G+
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K G+  + ++   +++ +GC  D  +YN ++      GK  +  +L+ EM  +G  P V
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY  +I  L +  + ++A  +   AK  G+  +   Y  LI  + K GR+D A   ++ 
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G  P++  +N +L A  K    ++AL  F+ + D+ CPPN  +Y+ + + L     
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EM   G++P+ ITY ++IS L + G + EA GL    ++    P   SYN 
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     +  ++  +      KGC  +  T V+L++ +     +AE +E A A+V   
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL----HKAECLEQA-AIVG-- 637

Query: 505 AISRDTFK--RLNRTF 518
           A+ ++T K    +R+F
Sbjct: 638 AVLKETAKSQHASRSF 653



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 30/389 (7%)

Query: 136 GFSPDV-VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML------ 188
           GF P   ++  ++   + SR + E AF +   + +   +P    YTILI    L      
Sbjct: 5   GFGPSSNISIELVANCVKSRKLRE-AFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPW 63

Query: 189 ----EGQTDKAMKLLDE-----------------MGMCKKGMVGQAFQFVRSLESRGCQP 227
                 + D+A++L ++                 MG    G   +A+  +   +++G  P
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            VI+YN +L  L    + EE  ++  EM  R   PNV TY+ILI  LCR+GK   A+++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  GL P+  + + +I   CK  +L+ A    + M    C P+ V +++++    K 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D A  ++EK+ D G  P    Y ++  + +  G K     +  EM+  G  PD    
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+ + C+ + G  ++   L  ++ +  F P   SY+I+I G  K    NE+ E+  AM E
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +GC  +   Y  +I+G    G   +A +L
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQL 391



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 19/361 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+  F+ G+ ++     + MV  GC PD+ +    +   F+  ++ K   +   + 
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G  PD  +Y+ LI G  KA       ++   ++ +G   D   YN +I   C  G + 
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A+++ +++      PTV+TY  +I                   G+ K   + +A+    
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVID------------------GLAKIDRLDEAYMLFE 428

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S G + +V+ Y+ L+     +G+ +E   +M E++ +GL PNV T++ L+ +L +  
Sbjct: 429 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 488

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A+   ++ K+    P+  +Y  LI+  C+  + + A  F   M   G  P+ + Y 
Sbjct: 489 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 548

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++   K GN  +A  +F +    G  P+ +SYN M   L S+   + A  +  E   K
Sbjct: 549 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 608

Query: 399 G 399
           G
Sbjct: 609 G 609



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISS----------LCRDGKTEDAVDVLRAAKEK 293
           K  E   ++  M      P    Y+ILI            LC+  + ++AV++    ++ 
Sbjct: 25  KLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQN 84

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
              P AY+Y+ +I  Y   G+ D A   L+   + G +P ++ YN IL    K    ++A
Sbjct: 85  RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L IFE++      PNV +YN +   L   G    AL +  +M   G+ P+ +T N +I  
Sbjct: 145 LRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDR 203

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+   ++EA  +   M+     P  ++++ +I G  K  R++++  +   M + G  P 
Sbjct: 204 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 263

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALV 501
              Y  LI      G + +  ++   +V
Sbjct: 264 AIVYTSLIRSFFKCGRKEDGHKIYKEMV 291


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 242/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C PDVV    +I  FF+E   NKA  +  E++++   P
Sbjct: 197 KSGQADDLL----RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   Y++++   CKA  ++ A   L ++ ++G  P+  TYN +I    S G  + A +VF
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF---VRSLE 221
            ++ R +  P V+T+ +L+ +    G+  +A  + D M M  KG     F +   +    
Sbjct: 313 KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM--KGQNPDVFSYNIMLNGYA 370

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 P + ++N+L++   N G  ++   +  EM   G++PNV+
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ +I++LCR GK +DA++      ++G+ PD Y+Y  LI  +C  G L  A E +  +
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P    Y+ +       G  
Sbjct: 491 MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+++ Y +L++  C+ G +DE + L  +M     +P+ I YNII
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G  +  R   +      M E G   N+ TY +++ G+       EA+ L   L +M+
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 669



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 237/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV  G  P+      LI  +    +  +AVRV + + +    PDV 
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 325

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+   CK  +I+ A  V D +  +G +PDV +YNIM+    ++G +     +FD +
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P + T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 386 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKM 445

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +Y+ L++     G   + ++L++E+++ G+  ++V +S +
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSI 505

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL P A  Y  L+  YC  G+++ A+   D M+S G 
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V Y T++  +CK G  D+ L +F ++   G  P+   YN +   L+ +G  + A  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  ++ TY+ ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++   G  P   TY ++I  +   G   EA ++ +++
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 235/460 (51%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + D+++   L+K F + +++++A+ ++  L +  E    P
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL--LHRTPELGCVP 180

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SPDVV YN +I      G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P  +TY+ ++ A                  +CK   + +A  F+R + +
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHA------------------LCKARAMDKAEAFLRQMVN 282

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  P+  +YN L+    + G+W+E  ++  EM  + + P+VVT+++L+ SLC+ GK ++
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY+ +++ Y   G L    +  D M+ DG  P I  +N ++ 
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 402

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  PNV +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  Y+ LI   C  G + +A  L+ ++ +      ++ ++ II   CK  R+ ++  + 
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P    Y +L++G    G   +A+ + +A+VS
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 214/441 (48%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M      PDVV    L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +++G+     +     + D +   G +P + T+N++I +  + GM++ A  +F+++  
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TYT +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G   D++ ++ ++  L  +G+  + + +    ++ GL P  V YS+L+ 
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + YN I+    + G    A   F ++++ G   N  +Y+ +   L+ +     A+ + 
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 662

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ D IT N++I+ + +   V+EA  L   +  +   P V++Y+I+I    K 
Sbjct: 663 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKE 722

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+P+
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPD 743



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 219/455 (48%), Gaps = 39/455 (8%)

Query: 87  KSNKAVRVMEILEKYGEP----DVFAYNALI-----SGFCKANQIELANKVLDRLRSRGF 137
           +  +A  +++ L++ G P    D+  + A I     S  C++    LA  + +R  SR  
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGP-ALAVALFNRAASRAQ 102

Query: 138 SPDVV-----TYNIMIGSLCSRGM-IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
            P V+     TY I++   C+R    E A   F QLLR   +  +I    L++      +
Sbjct: 103 GPRVLSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 161

Query: 192 TDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRSLESRG--CQPDVIS 231
           TD+A+ +L     E+G              +C +G  GQA   +R +   G  C PDV++
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN ++      G   +   L  EM+ RG+ P+ VTYS ++ +LC+    + A   LR   
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG+ P+ ++Y+ LI  Y   G+   A+     M     LPD+V +N ++ + CK G   
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A ++F+ ++  G  P+V SYN M +   + G  +    +   ML  GI P   T+N LI
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                 GM+D+A+ +  +M     +P V++Y  +I   C+  ++++++E    M ++G  
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS--MH 504
           P++  Y  LI+G    G   +A EL + +++  MH
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 195/429 (45%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KP+V+  T +I    +  K + A+ +  +++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AY+ LI GFC    +  A +++  + + G   D+V ++ +I +LC  G + 
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     PT + Y++L+    L G+ +KA+++ D M                
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM---------------- 560

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+ + Y  L+     +G+ +EG  L  EM+ +G++P+ + Y+I+I  L   G
Sbjct: 561 --VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  +  +Y  ++    K+   D AI     + +     DI+  N
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 678

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++A   +    ++A ++F  +S  G  P V +Y+ M + L   G    A  M S M + 
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EPD    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREH 798

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 799 IRFLPAKYH 807


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 241/502 (48%), Gaps = 56/502 (11%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV---RVMEILEKYGEPDVFAYNALISG 115
            +  M   GC PD      ++K+   + +S +A+   R+M   E    PDV  YN +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F K  +I  A  +   +  +GF PDVVT+N +I +LC    +++A  +  Q++ +   P 
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
            +TYT +I      G+ ++A K+  EM                  +CK G   +A +   
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 219 SLESRGCQPDVISYNMLLR------------------------------TLL-----NMG 243
           S+ ++G +P++++Y +LL                               T+L       G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             +E   +++EM  +GL P+V TYS LIS+LCR G+  DAVD        G+ P+   Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGC-LPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
            LI  +C  G L  A E +  M+++G   P+I  +N+I+ + CK G    A  IF+ + D
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +G   ++  +NT+       G+  +A  ++  M+S GI PD  TYN+L++   + G +D+
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            + L  +M   + +PT ++YNII+ G  +  R   + ++L  M   G   +  TY ++++
Sbjct: 486 GLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILK 545

Query: 483 GIGYGGWRAEAMELANALVSMH 504
           G+       EA+ +   L +M+
Sbjct: 546 GLCRNNCTDEAIVMFQKLCTMN 567



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 220/505 (43%), Gaps = 54/505 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   F+ GK  ++      M+  G  PDVV    +I    + R  + A  ++  +   G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   Y ++I G+    + E A K+   +  RG  PD+V++N  + SLC  G  + A 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F  +     +P ++TY IL+     EG     M   + M                   
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K+GM+ +A   +  ++ +G  PDV +Y+ L+  L  MG+  +      +MI  G++PN 
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 265 VTYSILIS------------------------------------SLCRDGKTEDAVDVLR 288
           V Y  LI                                     S+C++G+  DA  +  
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K+ G   D   ++ LI  YC  G +  A   LD MIS G  PD   YNT++  + K+G
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D  L +F ++SD    P   +YN +   L+ +G  + A  M+ EM+  G      TYN
Sbjct: 482 RIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYN 541

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            ++  LCR+   DEA+ +   + +   +  + + N +I      +R  E+ ++ +A+ + 
Sbjct: 542 IILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDS 601

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEA 493
           G  PN +TY ++I  +   G   EA
Sbjct: 602 GLVPNASTYGIMIRNLLKEGSVEEA 626



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 17/398 (4%)

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +   P +F Y  +++G C+A + EL      RL   G   D    N ++  LC     + 
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 160 AFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           A KV  + + +  C P   +Y I+++    + ++ +A+ LL  M                
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMM---------------- 105

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           + E   C PDV++YN ++      GK  +   L  EM+ +G  P+VVT++ +I++LC+  
Sbjct: 106 AKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKAR 165

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A  +LR   + G+ P+  +Y  +I  Y   GR + A +    M   G +PDIV++N
Sbjct: 166 AVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWN 225

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           + + + CK+G + +A EIF  ++  G  PN+ +Y  +     + G     +   + M   
Sbjct: 226 SFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGD 285

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI  + + +  LI    + GM+DEA+ +L +M+     P V +Y+ +I   C+  R+ ++
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++    M   G +PN   Y  LI+G    G   +A EL
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKEL 383



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 208/454 (45%), Gaps = 35/454 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+     SM A G +P++V    L+  +  E      +     ++  G   +  
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  LI  + K   ++ A  +L  ++ +G SPDV TY+ +I +LC  G +  A   F+Q+
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    +P  + Y  LIQ     G   KA +L+ EM                   +CK+G 
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A      ++  G + D+I +N L+     +G+  +   ++  MIS G+ P+  TY+ 
Sbjct: 413 VMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT 472

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++   + G+ +D +++ R   +K + P   +Y+ ++    + GR   A + L  MI  G
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCG 532

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               +  YN IL   C+N   D+A+ +F+KL  +    N+++ NTM +++++   +  A 
Sbjct: 533 TTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAK 592

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + S +   G+ P+  TY  +I  L ++G V+EA  +   ME +   P            
Sbjct: 593 DLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPC----------- 641

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +R +N++I  L    EKG       Y+  ++G
Sbjct: 642 --SRLLNDTIRTL---LEKGEIVKAGNYMSKVDG 670



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 3/281 (1%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           R   P + +Y +++       + E G      ++  GL+ +    + ++  LC   +T+D
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 283 AVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYNT 339
           AV V LR   E G  PDA+SY  ++   C D R   A++ L  M  +   C PD+V YNT
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  F K G   +A  ++ ++   G  P+V ++N++ +AL  +     A  ++ +M+  G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+++TY S+I      G  +EA  +  +M      P ++S+N  +   CK  R  E+ 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           E+  +M  KG +PN  TY +L+ G    G  A+ M   N +
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM 282



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           PP + +Y  + +    +      L     +L  G++ D+   N+++ CLC     D+AV 
Sbjct: 5   PPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVK 64

Query: 426 LLV-DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKG-CKPNETTYVLLIE 482
           +L+  M      P   SY I++   C   R  +++++L  M  E+G C P+  TY  +I 
Sbjct: 65  VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124

Query: 483 GIGYGGWRAEAMELANALV 501
           G    G   +A  L + ++
Sbjct: 125 GFFKEGKIGKACNLYHEMM 143


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 208/442 (47%), Gaps = 20/442 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG-EPDV 106
           R  +  E+   +++ +A    PDV     LI  +   R+  +A  V+ E+ E YG  P +
Sbjct: 71  RTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSL 130

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N ++ G CK+ ++  A    +   + G + D+ TY  ++  L     I+ A  + ++
Sbjct: 131 KTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEK 190

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +  + C PT+ TY  L+                   G+CK G + +A   +R +   GC 
Sbjct: 191 ITANGCTPTIATYNALLN------------------GLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDV++Y  L+  L    +  E  KL  EM  RGL  + V Y+ LI  L + GK   A  V
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
            +    +G  PD  +   +I   CK GR+  A+     M + G  P+ V Y+ ++   CK
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               D ALE+  ++    C P+  +YN +   L  SGD   A     EML  G +PD  T
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN L+S  C+ G  D A G+  DM S+   P V++Y  +I G CK R++ ++      M 
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472

Query: 467 EKGCKPNETTYVLLIEGIGYGG 488
           E+GC P+   Y  L++G+   G
Sbjct: 473 ERGCPPDSFVYSSLVDGLCKSG 494



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 209/416 (50%), Gaps = 23/416 (5%)

Query: 87  KSNKAVRVMEILEKYGEP----DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           KS K +  M+  E         D+  Y A++    K  +I+ A  +++++ + G +P + 
Sbjct: 142 KSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN ++  LC  G +E A  +  +++ + C P V+TYT LI     E ++ +A KL  EM
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ + G + QA    +++ S+GC PDV++ + ++  L   G+ 
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
               ++   M +RGL PN V YS LI  LC+  K + A+++L   K+   TPD  +Y+ L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I   CK G ++ A  F D M+  GC PD+  YN +++ FCK GN D A  +F+ +S   C
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            PNV +Y T+ S L       +A      M  +G  PD   Y+SL+  LC+ G ++    
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM 501

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           L  +ME +    +  +   +I   CK  R++E++ +  A+ ++G  P+   Y  +I
Sbjct: 502 LFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSII 555



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 23/434 (5%)

Query: 76  TKLIKKFFQERK-SNKAVRVMEILE--KYG-EPDVFAYNALISGFCKANQIELANKVLDR 131
           T  + K FQ  K ++ A  + + L   ++G +  V   NAL+  F +  +   A  +L  
Sbjct: 25  TDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKN 84

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEG 190
             +  F PDV T+N++I   C     E AF V  ++  D    P++ T+ +++       
Sbjct: 85  ELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLH------ 138

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G+CK G V  A     +  + GC  D+ +Y  ++  L    K ++   
Sbjct: 139 ------------GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVA 186

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           LM ++ + G  P + TY+ L++ LC+ G+ E+A+D+LR   + G TPD  +Y  LI    
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K+ R   A +    M   G + D V Y  ++    + G   QA  +++ ++  GC P+V 
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           + +TM   L  +G    A+ +   M ++G+ P+E+ Y++LI  LC+   +D A+ +L  M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           +     P  I+YNI+I G CK+  +  +      M E GCKP+  TY +L+ G    G  
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426

Query: 491 AEAMELANALVSMH 504
             A  + + + S H
Sbjct: 427 DAACGVFDDMSSSH 440



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 169/356 (47%), Gaps = 26/356 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + G+ +E++  +  +V NGC PDVV  T LI    +E++S +A ++ + +   G   D  
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y ALI G  +A +I  A+ V   + S+G  PDVVT + MI  LC  G I +A ++F  +
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P  + Y+ LI       + D A+++L +M                 G+CK G V
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A  F   +   GC+PDV +YN+L+      G  +    +  +M S    PNVVTY  L
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS LC+  +   A    +  KE+G  PD++ Y  L+   CK G+L+      D M   G 
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG- 510

Query: 331 LPDIVNYNT---ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
              + N  T   ++   CK    D+A+ +F  +   G  P+  +YN++ S L  S 
Sbjct: 511 ---VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSA 562



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 156/295 (52%), Gaps = 20/295 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   +AGK  ++    ++M + GC PDVV  + +I    +  +   AVR+ + +E
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+ALI G CKA +++ A ++L +++    +PD +TYNI+I  LC  G +E
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A   FD++L   CKP V TY IL+      G TD A  + D+M                
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+  + +A  + + ++ RGC PD   Y+ L+  L   GK E G  L  EM   G+ 
Sbjct: 453 SGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV- 511

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            N  T + LI  LC+  + ++AV +  A +++G+ P  Y+Y+ +IS   K  +++
Sbjct: 512 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 101/249 (40%), Gaps = 30/249 (12%)

Query: 16  VRVSSSAETR---PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDV 72
           VR+  S E R   PN         E  +  LI    +A K D +L  +  M    C PD 
Sbjct: 325 VRIFKSMEARGLAPN---------EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375

Query: 73  VMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
           +    LI    +      A     E+LE   +PDV+ YN L+SGFCKA   + A  V D 
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + S   SP+VVTY  +I  LC R  +  A   F  +    C P    Y+ L+      G+
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495

Query: 192 TDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            +    L DEM                 +CK   V +A     ++   G  P   +YN +
Sbjct: 496 LEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSI 554

Query: 236 LRTLLNMGK 244
           + TL+   K
Sbjct: 555 ISTLIKSAK 563



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 1/249 (0%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G + +V T + L+    R  +  +A ++L+        PD  +++ LI+ YC     + A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 319 IEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
              +  M  D G  P +  +N +L   CK+G    A++ FE  +  GC  ++ +Y  +  
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +     A+ ++ ++ + G  P   TYN+L++ LC+ G ++EA+ LL  +      P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V++Y  +I G  K +R  E+ ++   M  +G   +   Y  LI G+   G   +A  + 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 498 NALVSMHAI 506
             + S   +
Sbjct: 294 KTMTSQGCV 302


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 213/442 (48%), Gaps = 22/442 (4%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISG 115
           L+F  +    G + +   C  L++ F  +    +A RV  + L     PD F Y  LI G
Sbjct: 2   LFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           FCKA QI  A  +L  +++ G +P +VT+  +I  LC     + A ++F Q++    KP 
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
              YT++I                    +CK   +  A  +   +   GC PD ++Y +L
Sbjct: 122 AFLYTVVIGH------------------LCKINKLDLAASYFERMVQSGCLPDKVTYTVL 163

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           + +L    KWE+G ++  EM+S+G  P +VTY+ +++  C+ G+ + A+ ++R  K  G 
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +P    Y  LI   CK  R D A E  +    D  + D++ Y + ++  CK G  D+A  
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKA 281

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+ + GC P+  SYN +  +L        A  ++ + + +   P       L+  LC
Sbjct: 282 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 341

Query: 416 RDGMVDEAVGLLVDMESTRFR-PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           +   V+EA  +L  M  T  R P+V++Y+ +I G CK  R++++  VL  M   GC P+ 
Sbjct: 342 KSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDV 401

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY  +I+     G   EA EL
Sbjct: 402 VTYTAIIDAFCKVGRLDEAREL 423



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 24/406 (5%)

Query: 29  HLLSFDVKETQFMK--LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
            ++   VK   F+   +I    +  K D +  + E MV +GC PD V  T L+   F+  
Sbjct: 112 QMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKAC 171

Query: 87  KSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K  +  ++ E +L K   P++  Y  +++G+CKA +I+ A  ++ RL+  G SP    Y+
Sbjct: 172 KWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYS 231

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I  LC     + A ++F+    D     VI YT  I                   G+C
Sbjct: 232 TLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFIS------------------GLC 271

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A      +   GC PD +SYN+++ +L    +  E ++LM + + R   P V 
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 331

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             ++L+  LC+  + E+A  +L    E G   P   +Y  +I   CK  RLD A   L  
Sbjct: 332 VCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQK 391

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   GC+PD+V Y  I+ AFCK G  D+A E+F+++ + GC  +V +YN +      +  
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
              A+ MI EM  +GI+P+ ++ ++++  LC++  V+EA  L+  M
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 209/435 (48%), Gaps = 21/435 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI+   +A +  +++  +  M A G  P +V    LI+K  +   ++KA+++  ++++  
Sbjct: 58  LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD F Y  +I   CK N+++LA    +R+   G  PD VTY +++ SL      E   
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F+++L     P ++TY  ++      G+ D+A+ L+  +                 G+
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK     +A +      + G   DVI Y   +  L   GK +E + +  +MI  G  P+ 
Sbjct: 238 CKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V+Y+++I SLC+D +  +A +++  A E+   P       L+   CK  R++ A   L+ 
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355

Query: 325 MISDG-CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
           M+  G   P +V Y+ ++   CK    D A  + +K+   GC P+V +Y  +  A    G
Sbjct: 356 MLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVG 415

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +   M  +G   D + YN LI   CR   VDEA+ ++ +M     +P V+S +
Sbjct: 416 RLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLS 475

Query: 444 IIILGFCKTRRINES 458
            I+ G CK  R+ E+
Sbjct: 476 TIVDGLCKESRVEEA 490



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 85/212 (40%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A    G   + Y+ + L+  +  DG    A       +     PD   Y T++  FCK  
Sbjct: 7   AKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAE 66

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              QA+ +  ++   G  P + ++ ++   L       +AL +  +M+   ++PD   Y 
Sbjct: 67  QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I  LC+   +D A      M  +   P  ++Y +++    K  +  +  ++   M  K
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           G  P   TY  ++ G    G   +A+ L   L
Sbjct: 187 GHSPELVTYATVVNGYCKAGRIDQALSLMRRL 218



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G + +  T NSL+     DG   EA  +  D   T FRP   +Y  +I GFCK  +I ++
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           + +L  M   G  P   T+  LI  +    +  +A+++ + ++ M  +  D F
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK-VKPDAF 123


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 225/477 (47%), Gaps = 24/477 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + GK  E++     +      PD    T LI    + RK +KA  V + + 
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   Y+ LI+G C   +I  A  +L+ +  +G  P V TY + I SLC  G ++
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   + +  C P+V TYT +I      G+ + A+ +  +M                
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +C +G  G A +    +E  G   +  +YN +++ L  M   E+   +  +M+  G  
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P VVTY+ LI    + G   +A   L   KE    PD  +Y  LIS +CK G+LD A  F
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSF 499

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+  G  P+   Y  ++  +CK G  D AL +FE++ + GC  ++ +YN + S L S
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL-S 558

Query: 382 SGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            G++   A    ++M  +G++P+ ITY SLI+ LC++   + A  +  +ME     P   
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAH 618

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           +Y  +I G C+  +++ +      + E GC+P   TY  L+ G+   G   EA +L 
Sbjct: 619 TYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLV 671



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 195/399 (48%), Gaps = 17/399 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P +  +N +I+  CK  +++ A  V +++      PD  TY  +I   C    ++ AF+
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           VFD++++D C P  +TY+ LI     EG+  +AM +L+EM                  +C
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC 313

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G V  A   VRS+  +GC P V +Y  ++  L   GK E    +  +M+  GL PN V
Sbjct: 314 DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTV 373

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI+ LC +G+   A+ +    +  G   +A +Y+ +I        ++ A+   + M
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           + DG  P +V YNT++    K G  + A      + +  C P+  +Y  + S     G  
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A     EML  GI P++ TY ++I   C++G +D A+ L   ME      ++ +YN I
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G  K  R +E+ +  A M E+G +PN  TY  LI G+
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 239/490 (48%), Gaps = 41/490 (8%)

Query: 10  PKSNERVRVSSSAETRP-------NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
           PK+ E  R++S+   RP       NTH+ + D     F  + KR F    +   +    S
Sbjct: 57  PKNPELNRLASTL--RPHHVSKIINTHI-NTDTALQFFYWISKRHF----YKHDMGCFVS 109

Query: 63  MVANGCKPDVVMCTKLIKKFFQE--RKSNKAVRVMEILEKYGEPD-------VFAYNALI 113
           M+    K  ++     ++    +  R  ++  RV + L      D       ++++N L+
Sbjct: 110 MLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLL 169

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
               K + +  A  V  ++ S G  P ++T+N MI  LC +G ++ A  VF+++ + +  
Sbjct: 170 LQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC 229

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P   TYT LI                  +G C+   + +AF+    +   GC P+ ++Y+
Sbjct: 230 PDAFTYTSLI------------------LGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYS 271

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L+  L N G+  E   ++ EM  +G+EP V TY++ ISSLC  G+ +DA++++R+  +K
Sbjct: 272 TLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G +P   +Y  +IS   + G+++LAI     M+ +G +P+ V YN ++   C  G    A
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L+IF+ +   G   N  +YN +   L+   D  +A+ + ++ML  G  P  +TYN+LI  
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             + G ++ A   L  M+ +   P   +Y  +I GFCK  +++ +      M + G  PN
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 474 ETTYVLLIEG 483
           + TY  +I+G
Sbjct: 512 QWTYTAMIDG 521



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 224/479 (46%), Gaps = 22/479 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   FRAGK + ++     M+  G  P+ V    LI +   E +   A+++ + +E
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +G   +   YN +I G    + IE A  V +++   G SP VVTYN +I     RG + 
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A +    +   NC+P   TY  LI      G+ D A     EM                
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK+G +  A      +E  GC   + +YN ++  L    ++ E EK   +M  +GL+
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN +TY+ LI+ LC++  T  A  +    ++K   P+A++Y  LI   C++G++D A   
Sbjct: 580 PNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA--- 636

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + +  +GC P I  Y+T+++  C+ G +++A ++ E + + G  P++  Y ++  A   
Sbjct: 637 -ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCK 695

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           S     AL + + M  KG +P    Y  LI  LC     +EA+ +   +   ++   +I 
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIV 755

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +++ G  +    +  ++ L  M  + C P+  TY++L   +   G      ++ N L
Sbjct: 756 WTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRL 814



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 14/344 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  + +LI    + GK D +  F   M+  G  P+    T +I  + +E K + A+ + E
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E+ G    +  YNA+ISG  K N+   A K   ++  +G  P+ +TY  +I  LC   
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-------------M 202
               AFK+F ++ + NC P   TYT LI     EG+ D A +L +               
Sbjct: 597 ATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVS 656

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C++G   +A Q V +++ +G  P +  Y  LL       K +   ++   M  +G +P
Sbjct: 657 GLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQP 716

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++  Y +LI +LC   + E+A+++ ++  +K    D   +  L+    ++G  DL ++FL
Sbjct: 717 HLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFL 776

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             M S  C P +  Y  +     K G +    +I  +L +V  P
Sbjct: 777 YLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSLP 820



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 42/248 (16%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLP--DIVNYNTILAAF 344
           R  K+K L P  +    +I A   +  L    +FL  + S D  L    + ++NT+L   
Sbjct: 113 RLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQL 172

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K      A  ++ ++   G  P++ ++NTM + L   G    A+ + +++    + PD 
Sbjct: 173 GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDA 232

Query: 405 ITYNS-----------------------------------LISCLCRDGMVDEAVGLLVD 429
            TY S                                   LI+ LC +G + EA+ +L +
Sbjct: 233 FTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      PTV +Y + I   C   R++++I ++ +M +KGC P+  TY  +I G+    +
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL----F 348

Query: 490 RAEAMELA 497
           RA  MELA
Sbjct: 349 RAGKMELA 356


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 217/428 (50%), Gaps = 19/428 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           L+K     G+  +SL+F + +VA G + D V    L+    +  ++  AV+++ ++E + 
Sbjct: 86  LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 145

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  YN +I G CK   +  A  +   + +RG  PD +TY  +I   C  G +  AF
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + D+++  N  P V  Y ILI A                  +CK+G V +A   +  + 
Sbjct: 206 SLLDEMILKNINPGVYIYNILINA------------------LCKEGNVKEAKNLLAVMT 247

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +P V++Y+ L+     +G+ +  +++   M+  G+ PNV +Y+I+I+ LC+  + +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+++LR    K + PD  +Y+ LI   CK GR+  A+  ++ M   G   D+V Y ++L
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            A CKN N D+A  +F K+ + G  P + +Y  +   L   G    A  +   +L KG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            D  TY  +IS LC++GM DEA+ +   ME     P  +++ III    +    +++ ++
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 462 LAAMFEKG 469
           L  M  KG
Sbjct: 488 LHEMIAKG 495



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 203/415 (48%), Gaps = 17/415 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N ++    K  Q   A  +  ++  +G   + VT NI+I   C  G +  +F V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P  IT   L++   L+G+  K++   D++                 G+CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + +R +E R  +P+V+ YN ++  L       E   L +EM +RG+ P+ +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C  G+   A  +L     K + P  Y Y+ LI+A CK+G +  A   L  M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            +G  P +V Y+T++  +C  G    A +IF  +  +G  PNV SYN M + L       
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ EML K + PD +TYNSLI  LC+ G +  A+ L+ +M        V++Y  ++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              CK + ++++  +   M E+G +P   TY  LI+G+  GG    A EL   L+
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 231/471 (49%), Gaps = 27/471 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P ++   K++    + ++   A+ + + +E  G   +    N LI+ FC   Q+  +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           L ++   G+ PD +T N ++  LC +G ++ +    D+++    +   ++Y  L+     
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G+T  A+KLL  +                 G+CK  +V +A+     +++RG  PD I+
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  L+     +G+      L+ EMI + + P V  Y+ILI++LC++G  ++A ++L    
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G+ P   +Y  L+  YC  G +  A +    M+  G  P++ +YN ++   CK    D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ +  ++      P+  +YN++   L  SG    AL +++EM  +G   D +TY SL+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC++  +D+A  L + M+    +PT+ +Y  +I G CK  R+  + E+   +  KGC 
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANAL---------VSMHAISRDTFKR 513
            +  TY ++I G+   G   EA+ + + +         V+   I R  F++
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 478



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 211/435 (48%), Gaps = 19/435 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+   S   +  ++  G +PD +    L+K    + +  K++   + +   G + D  +Y
Sbjct: 59  GQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSY 118

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             L++G CK  +   A K+L  +  R   P+VV YN +I  LC   ++  A+ ++ ++  
Sbjct: 119 GTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P  ITYT LI    L GQ   A  LLDEM +                  +   P V
Sbjct: 179 RGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMIL------------------KNINPGV 220

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
             YN+L+  L   G  +E + L+  M   G++P VVTYS L+   C  G+ ++A  +  A
Sbjct: 221 YIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHA 280

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             + G+ P+ YSY+ +I+  CK  R+D A+  L  M+    +PD V YN+++   CK+G 
Sbjct: 281 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 340

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              AL +  ++   G P +V +Y ++  AL  + +  +A  +  +M  +GI+P   TY +
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  LC+ G +  A  L   +        V +Y ++I G CK    +E++ + + M + G
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460

Query: 470 CKPNETTYVLLIEGI 484
           C PN  T+ ++I  +
Sbjct: 461 CIPNAVTFEIIIRSL 475



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 18/350 (5%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANK 127
           +P+VVM   +I    +++  N+A  +   ++  G  PD   Y  LI GFC   Q+  A  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           +LD +  +  +P V  YNI+I +LC  G ++ A  +   + ++  KP V+TY+ L+    
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
           L G+   A ++   M                 G+CK   V +A   +R +  +   PD +
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 326

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN L+  L   G+      LM EM  RG   +VVTY+ L+ +LC++   + A  +    
Sbjct: 327 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           KE+G+ P  Y+Y  LI   CK GRL  A E   +++  GC  D+  Y  +++  CK G  
Sbjct: 387 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 446

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           D+AL I  K+ D GC PN  ++  +  +L+   +  +A  ++ EM++KG+
Sbjct: 447 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 144/299 (48%), Gaps = 18/299 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+   +   ++ M+     P V +   LI    +E    +A  ++ ++ K G +P V  Y
Sbjct: 199 GQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTY 258

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + L+ G+C   +++ A ++   +   G +P+V +YNIMI  LC    ++ A  +  ++L 
Sbjct: 259 STLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 318

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P  +TY  LI      G+   A+ L++EM                  +CK   + +
Sbjct: 319 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      ++ RG QP + +Y  L+  L   G+ +  ++L   ++ +G   +V TY+++IS
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 438

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            LC++G  ++A+ +    ++ G  P+A +++ +I +  +    D A + L  MI+ G L
Sbjct: 439 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 49/260 (18%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
            G+   +     +MV  G  P+V     +I    + ++ ++A+ ++ E+L K   PD   
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN+LI G CK+ +I  A  +++ +  RG   DVVTY  ++ +LC    ++ A  +F ++ 
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +PT+ TYT LI      G+   A +L   +                 G+CK+GM  
Sbjct: 388 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 447

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLN------------------------------ 241
           +A      +E  GC P+ +++ +++R+L                                
Sbjct: 448 EALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVF 507

Query: 242 -MGKWEEGEKLMTEMISRGL 260
              + ++ EKL+ EMI++GL
Sbjct: 508 VQNENDKAEKLLHEMIAKGL 527



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP    ++ ++ +  K  +   AI     M   G   + V  N ++  FC  G    +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+  +G  P+  + NT+   L   G+  ++L    +++++G + D ++Y +L++ LC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G    AV LL  +E    RP V+ YN II G CK + +NE+ ++ + M  +G  P+  
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  LI G    G    A  L + ++
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMI 212


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 235/459 (51%), Gaps = 18/459 (3%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVFAYNALISGFCK 118
           +E M  NG  P VV  +  I    +      A+  V  ++   G  +V+ YNA+I G CK
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCK 337

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             +++ A KVL+ ++S G SPDV TY+I+I   C +G +E    + +++   N +P++++
Sbjct: 338 KGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS 397

Query: 179 YTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLE 221
           Y+ L      +  +D ++ +  ++G                  C +G +  A + +  + 
Sbjct: 398 YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                PD  ++  L+     MG W    +    M+  G+ P++ T +++I + CR+G+ E
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A++++   + +G+ P+ ++Y+ +I+  CK+ + + A+E    M+    LP +V Y+T++
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             F K  N+ +AL ++ ++  +G  P++ +Y  + + L        A  +  +M   G+ 
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD+I+Y S+I+  CR G + +A  L  +M      PTV++Y  ++ G+CK  RI+ +  +
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADML 697

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  M  KG  P+  TY +LI      G   +A+E+ N +
Sbjct: 698 IDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 226/450 (50%), Gaps = 18/450 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  + +L F+ S+++     +V     +I    ++ + ++A++V+E ++  G  PDV+
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI GFCK   +E    +++ ++     P +V+Y+ +   LC + + + +  +F  L
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                K     Y+ILI+   ++G  D A KL++EM                 G CK G+ 
Sbjct: 422 GAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLW 481

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +F   +   G  P + + N+++      G+ EE   LM EM ++G+ PN+ TY+ +
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ LC++ K+E A+++     ++ + P    Y  LI  + K      A+     M+  G 
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V Y  ++   C      +A  +F+K+++ G  P+  SY ++ +     GD  +A  
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +EML +G  P  +TY SL+   C+   +D A  L+ +M+     P V++YN++I    
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +   +++++E+L  M E G  P+  TY++L
Sbjct: 722 RRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 193/422 (45%), Gaps = 23/422 (5%)

Query: 104 PDVFAYNALISGFCKANQIEL------ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           P+VF Y  +++ +CK N  E       A ++L+ +   G SP VVTY+  I  LC  G +
Sbjct: 247 PNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYV 306

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           ESA      L+  N    V  Y  +I     +G+ D+A+K+L+EM               
Sbjct: 307 ESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL 366

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CK+G V +    +  ++    +P ++SY+ L   L      +    +  ++ + G 
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGY 426

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           + +   YSILI   C  G  + A  ++       L PD  +++ L+  +CK G    A+E
Sbjct: 427 KYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALE 486

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           F + M+  G LP I   N I+ A C+ G  ++AL +  ++   G  PN+ +YN + + L 
Sbjct: 487 FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLC 546

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                 RAL +   ML + + P  + Y++LI    +     +A+ L   M      P ++
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y I+I   C   R+ E+  +   M E G  P++ +Y  +I G    G   +A  L N +
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666

Query: 501 VS 502
           + 
Sbjct: 667 LQ 668



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 185/403 (45%), Gaps = 23/403 (5%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  ++ LI  F   + +E A  V  + +  G      + N ++  L      E    +F+
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 166 QLLRDNCKPTVITYTILI----QATMLEGQTD--KAMKLLDEM----------------- 202
           ++      P V TYTI++    +    E   D  +A ++L+EM                 
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C+ G V  A  FVRSL S     +V  YN ++  L   G+ +E  K++ EM S G+ P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V TYSILI   C+ G  E  + ++   K   + P   SY  L    CK    D++++  
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             + + G   D   Y+ ++  FC  G+ D A ++ E++      P+ S++ ++       
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G  + AL   + ML  GI P   T N +I   CR+G V+EA+ L+ +M++    P + +Y
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           N +I   CK R+   ++E+   M ++   P+   Y  LI+G  
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFA 581



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 163/341 (47%), Gaps = 19/341 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           +   +T +  LIK     G  D +   +E MV N   PD      L+  F +      A+
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
               ++ + G  P +   N +I   C+  ++E A  +++ ++++G  P++ TYN +I  L
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C     E A ++F  +L+ N  P+V+ Y+ LI     +  + KA+ L             
Sbjct: 546 CKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALML------------- 592

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
               + R L+  G  PD+++Y +L+  L +  +  E   L  +M   G+ P+ ++Y+ +I
Sbjct: 593 ----YARMLKI-GVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  CR G    A  +     ++G  P   +Y  L+  YCK  R+D+A   +D M   G  
Sbjct: 648 AGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGIT 707

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           PD+V YN ++AA  + GN D+ALE+  ++ + G  P+  +Y
Sbjct: 708 PDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 34/354 (9%)

Query: 160 AFKVFDQLLRD--NCKPTVITYTILIQA----TMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           AF++F  LL    +   +VI + +LI+     +MLE   D  +               QA
Sbjct: 161 AFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFL---------------QA 205

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    L +R C       N LL+ L    + E    L  EM S G  PNV TY+I+++ 
Sbjct: 206 KKTGLELSTRSC-------NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNF 258

Query: 274 LCR------DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
            C+      D  T  A ++L   +  G +P   +Y   I   C+ G ++ A++F+  +IS
Sbjct: 259 YCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLIS 318

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
              L ++  YN I+   CK G  D+AL++ E++   G  P+V +Y+ +       GD  +
Sbjct: 319 ANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEK 378

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
            L +I EM    +EP  ++Y+SL   LC+  + D ++ +  D+ +  ++    +Y+I+I 
Sbjct: 379 GLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIK 438

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           GFC    ++ + +++  M      P+ + +  L+ G    G    A+E  N ++
Sbjct: 439 GFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMML 492



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 7/184 (3%)

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           ++ ++ ++  F  N   + A+++F +    G   +  S N +   L  +  +     +  
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 394 EMLSKGIEPDEITYNSLISCLCRD--GMVD----EAVGLLVDMESTRFRPTVISYNIIIL 447
           EM S G  P+  TY  +++  C+   G  D    +A  +L +ME     PTV++Y+  I 
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           G C+   +  +++ + ++       N   Y  +I G+   G   EA+++   + S   IS
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC-GIS 357

Query: 508 RDTF 511
            D +
Sbjct: 358 PDVY 361


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 220/455 (48%), Gaps = 20/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK ++   F+  +   G  PD+V    LI  +  +    +A  +M  +   G  P V+
Sbjct: 237 KDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVY 296

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I+G CK  + E A +V   +   G SPD  TY  ++   C +G       +F  +
Sbjct: 297 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDM 356

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              +  P ++ ++ ++      G  DKA+   + +                 G C+KGM+
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A      +  +GC  DV++YN +L  L       E +KL  EM  RGL P+  T +IL
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTIL 476

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ G  ++A+++ +  KEK +  D  +Y+ L+  + K G +D A E    M+S   
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP  ++++ ++ A C  G+  +A  +++++      P V   N+M      SG+      
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR--FRPTVISYNIIILG 448
            + +M+S+G  PD I+YN+LI    ++  + +A GL+  ME  +    P V +YN I+ G
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           FC+  ++ E+  VL  M E+G  P+ +TY  LI G
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLING 691



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 200/425 (47%), Gaps = 23/425 (5%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK   PD+  YN LIS +     +E A +++  + S+GFSP V TYN +I  LC  G
Sbjct: 250 EVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG 309

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------ 203
             E A +VF ++LR    P   TY  L+     +G   +   +  +M             
Sbjct: 310 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFS 369

Query: 204 -----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                  + G + +A  +  S++  G  PD + Y +L++     G   E   L  EM+ +
Sbjct: 370 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ 429

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G   +VVTY+ ++  LC+     +A  +     E+GL PD+Y+   LI  +CK G L  A
Sbjct: 430 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNA 489

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +E    M       D+V YNT+L  F K G+ D A EI+  +      P   S++ + +A
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L S G    A  +  EM+SK I+P  +  NS+I   CR G   +    L  M S  F P 
Sbjct: 550 LCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEK--GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ISYN +I GF K   ++++  ++  M EK  G  P+  TY      I +G  R   M+ 
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTY----NSILHGFCRENQMKE 665

Query: 497 ANALV 501
           A A++
Sbjct: 666 AEAVL 670



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 211/477 (44%), Gaps = 57/477 (11%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ F Q RK  +A     +L   G    + A NALI    +   +ELA ++   +   G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
              +V T NIM+ +LC  G +E       ++      P ++TY  LI A   +G  ++A 
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +L+  M                 G+CK G   +A +    +   G  PD  +Y  LL   
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
              G   E E + ++M SR + P++V +S ++S   R G  + A+    + KE GL PD 
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN------------ 347
             Y  LI  YC+ G +  A+   + M+  GC  D+V YNTIL   CK             
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 348 -----------------------GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
                                  GN   A+E+F+K+ +     +V +YNT+       GD
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  + ++M+SK I P  I+++ L++ LC  G + EA  +  +M S   +PTV+  N 
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +I G+C++   ++    L  M  +G  P+  +Y  LI    YG  + E M  A  LV
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI----YGFVKEENMSKAFGLV 633



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 194/395 (49%), Gaps = 18/395 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            ++ LI  F +A ++  A +    LRS+G++  +   N +IGSL   G +E A++++ ++
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R      V T  I++ A                  +CK G + +   F+  ++ +G  P
Sbjct: 217 SRSGVGVNVYTLNIMVNA------------------LCKDGKMEKVGTFLSEVQEKGVYP 258

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+++YN L+    + G  EE  +LM  M S+G  P V TY+ +I+ LC+ GK E A +V 
Sbjct: 259 DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVF 318

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL+PD+ +Y  L+   CK G           M S   +PD+V ++++++ F ++
Sbjct: 319 AEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRS 378

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN D+AL  F  + + G  P+   Y  +       G    A+ + +EML +G   D +TY
Sbjct: 379 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTY 438

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+++  LC+  M+ EA  L  +M      P   +  I+I G CK   +  ++E+   M E
Sbjct: 439 NTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  K +  TY  L++G G  G    A E+   +VS
Sbjct: 499 KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 21/359 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R+G  D++L +  S+   G  PD V+ T LI+ + ++   ++A+ +  E+L++    DV 
Sbjct: 377 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVV 436

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN ++ G CK   +  A+K+ + +  RG  PD  T  I+I   C  G +++A ++F ++
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                K  V+TY  L+      G  D A ++  +M                   S+   P
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM------------------VSKEILP 538

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             IS+++L+  L + G   E  ++  EMIS+ ++P V+  + +I   CR G   D    L
Sbjct: 539 TPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFL 598

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM--ISDGCLPDIVNYNTILAAFC 345
                +G  PD  SY+ LI  + K+  +  A   +  M     G +PD+  YN+IL  FC
Sbjct: 599 EKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFC 658

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           +     +A  +  K+ + G  P+ S+Y ++ +   S  +   A     EML +G  PD+
Sbjct: 659 RENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 20/311 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI+   R G   E++     M+  GC  DVV    ++    + +   +A ++  E+ E+ 
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD +    LI G CK   ++ A ++  +++ +    DVVTYN ++      G I++A 
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +++  ++     PT I+++IL+ A   +G   +A ++ DEM                 G 
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR--GLEP 262
           C+ G       F+  + S G  PD ISYN L+   +      +   L+ +M  +  GL P
Sbjct: 586 CRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVP 645

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V TY+ ++   CR+ + ++A  VLR   E+G+ PD  +Y  LI+ +     L  A  F 
Sbjct: 646 DVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFH 705

Query: 323 DYMISDGCLPD 333
           D M+  G  PD
Sbjct: 706 DEMLQRGFSPD 716



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 139/324 (42%), Gaps = 52/324 (16%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRG-------LEPNVVTYS----------ILIS 272
           +S + ++  L+  G+  + +  +  MI R        +   V TYS          +LI 
Sbjct: 104 LSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIR 163

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +  +  K  +A +     + KG T    + + LI +  + G ++LA      +   G   
Sbjct: 164 TFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV 223

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++   N ++ A CK+G  ++      ++ + G  P++ +YNT+ SA  S G    A  ++
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-------ESTRFR--------- 436
             M SKG  P   TYN++I+ LC+ G  + A  +  +M       +ST +R         
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 343

Query: 437 -------------------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
                              P ++ ++ ++  F ++  +++++    ++ E G  P+   Y
Sbjct: 344 GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 403

Query: 478 VLLIEGIGYGGWRAEAMELANALV 501
            +LI+G    G  +EAM L N ++
Sbjct: 404 TILIQGYCRKGMISEAMNLRNEML 427



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 59/138 (42%)

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  N S ++ +      +     A    + + SKG        N+LI  L R G V+ A 
Sbjct: 151 CGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAW 210

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +  ++  +     V + NI++   CK  ++ +    L+ + EKG  P+  TY  LI   
Sbjct: 211 RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270

Query: 485 GYGGWRAEAMELANALVS 502
              G   EA EL +A+ S
Sbjct: 271 SSQGLMEEAFELMHAMPS 288


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 236/477 (49%), Gaps = 41/477 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           +AG+ D++   ++ M   G K DV++ + LI+   ++ + ++A+   + + +   P+V  
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVIT 70

Query: 109 YNALISGFCKANQIELANKVLDRLRSR-----GFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           YN +++G CKAN+I+   ++ D +  R     G  PDV++Y+ +I +LC    ++ A++ 
Sbjct: 71  YNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 130

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F ++    C P V+TY+ LI       + D+A  LL ++                 G  +
Sbjct: 131 FKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKR 190

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G   +  + +  ++ +G   ++I +N +L  L    + E+  +    ++  G +PNVVT
Sbjct: 191 QGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVT 250

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++ +  LC+ GK ++A  +L    E  +TPD  +Y  +I  +CK GR+D A +    M+
Sbjct: 251 YNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 310

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
              C+P  V + T+L  F ++  + +A  + E + + G  P + +YN +   +  +    
Sbjct: 311 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 370

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT-VISYNII 445
            AL +  +M  K  +PD  TY  LI CLCR   VDEA   L  ME+    P   I + ++
Sbjct: 371 SALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 430

Query: 446 ------------------ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                             ++  CK    +E++EV+  M  KG +P+E TYV ++  +
Sbjct: 431 EVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 201/392 (51%), Gaps = 14/392 (3%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +I+GFCKA Q++ A ++LD ++ RG   DV+ ++ +I  LC +G I+ A + F + +
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSM 60

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
            + C P VITY  ++       + D+ ++L D+M               R   S GC+PD
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEK-------------RYEASHGCEPD 107

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           VISY+ ++  L    + ++  +    M + G  PNVVTYS LI  LC+  + ++A  +L 
Sbjct: 108 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLM 167

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K + + P A  Y+ +++ + + G+    +E L +M   G   +I+++N +L A  KN 
Sbjct: 168 QLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 227

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A + FE+L   G  PNV +YN     L  +G    A  ++ EM+   + PD ITY+
Sbjct: 228 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYS 287

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           S+I   C+ G +D+A  +   M      P  +++  ++ GF + ++  E+  V   M   
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           G  P   TY +L++ +        A+E+ + +
Sbjct: 348 GFIPGLQTYNVLMDCVCGADSVESALEIYHKM 379



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 183/364 (50%), Gaps = 24/364 (6%)

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y  +I   C  G ++ AF++ D++     K  V+ ++ LIQ                  G
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQ------------------G 43

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-----ISR 258
           +C+KG + +A +  +S+    C P+VI+YN ++  L    + +EG +L  +M      S 
Sbjct: 44  LCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASH 102

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G EP+V++YS +I +LC+  + + A +  +  +  G  P+  +Y  LI   CK  R+D A
Sbjct: 103 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEA 162

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L  +  +  +P  + YN ++  F + G   + LE+   + + G   N+  +N M  A
Sbjct: 163 YSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHA 222

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           LW + ++ +A      +L  G +P+ +TYN  +  LC+ G VDEA  +L++M  ++  P 
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           VI+Y+ II GFCK  R++++ +V   M    C P+  T++ L+ G        EA  +  
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342

Query: 499 ALVS 502
            +V+
Sbjct: 343 DMVN 346



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 216/462 (46%), Gaps = 38/462 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PD 105
           +A + D++  + + M A GC P+VV  + LI    +  + ++A  ++  L+  GE   P 
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLK--GEDMVPR 177

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              YNA+++GF +  +     ++L  ++ +GF  +++ +N M+ +L      E A + F+
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           +LL+   KP V+TY + +      G+ D+A ++L EM                 G CK G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A      +    C P  +++  LL       K  E  ++  +M++ G  P + TY+
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L+  +C     E A+++    K K   PDA +Y PLI   C+  R+D A EFLD M +D
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             +P+    + ++   CK G  D+A  + + + ++                  +G+   A
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEI----------------CKAGEPDEA 461

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + +I +M+ KG+ PDE TY +++  LC    VD A+     M S    P +++Y ++I  
Sbjct: 462 VEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGE 521

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
            C     +++  +  AM   G  P   T   L   +   G++
Sbjct: 522 ACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQ 563



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 170/391 (43%), Gaps = 34/391 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R GK  E L  +  M   G   +++    ++   ++  +  KA +  E L K G+ P+V 
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  + G CKA +++ A ++L  +     +PDV+TY+ +I   C  G ++ A  VF ++
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +   C P  +T+  L+       ++ +A ++ ++M                  +C    V
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    ++ +  QPD  +Y  L++ L    + +E ++ +  M +  + PN      L
Sbjct: 370 ESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 429

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC+ G+ ++A  VL    E                 CK G  D A+E ++ M+  G 
Sbjct: 430 VEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGV 473

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   Y  +L + C     D A+  FEK++  GC P + +Y  +     S+     A  
Sbjct: 474 RPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFR 533

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           +   M++ G  P   T  +L SCL   G  D
Sbjct: 534 IFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 2/273 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AG+ D++      M+ + C P  V    L+  F + +KS +A RV E +   G  P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+   C A+ +E A ++  +++ +   PD  TY  +I  LC    ++ A +  D +
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESRGCQ 226
             DN  P       L++    +G+ D+A  +LD +  +CK G   +A + +  +  +G +
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVR 474

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  +Y  +LR+L  + + +       +M SRG  P +VTY++LI   C     +DA  +
Sbjct: 475 PDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRI 534

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             A    G TP A +   L S     G  DL +
Sbjct: 535 FEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLV 567


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 20/431 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P+   C  ++ +  + R+     R+ ++L     P+VF +N +I   CK  ++  A  + 
Sbjct: 167 PNTRTCNHILLRLARNRQGGLVRRLFDLLPV---PNVFTFNIVIDFLCKEGELVEARALF 223

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
            R+++ G SPDVVTYN +I      G +E   ++  ++ +  C   V+TY  LI      
Sbjct: 224 VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF 283

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+ +KA     EM                   CK+G+V +A +    +  RG  P+  +Y
Sbjct: 284 GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTY 343

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+      G+ ++   L+ EM+ +GL PNVVTY++++  LC++GK  +A +VL   + 
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMER 403

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+  +   Y  LI  +  +   + A++ L+ M + G   D+  Y T++   CK+   D+
Sbjct: 404 GGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDE 463

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +  K++  G  PN   Y T+  AL+ +G +  A+ ++ ++L  G +P+ +TY +LI 
Sbjct: 464 AKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+ G + EA+     M      P V +Y  +I GFCK   +N+++ ++  M +KG   
Sbjct: 524 GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSL 583

Query: 473 NETTYVLLIEG 483
           ++  Y  LI+G
Sbjct: 584 DKVVYTSLIDG 594



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 222/473 (46%), Gaps = 18/473 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+      M A GC PDVV    LI  + +     +  +++  + K G   DV 
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K  ++E A      ++ +G   +VVT++  + + C  G+++ A K+F Q+
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P   TYT L+  T   G+ D A+ LLDEM                 G+CK+G V
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +E  G + + + Y  L+         E    L+ +M ++G+E +V  Y  L
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+D K ++A  +L      GL P+   Y  ++ A  K G+   A+  L  ++  G 
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y  ++   CK G+  +A+  F K+ ++G  PNV +Y  +       G   +A+ 
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++EM+ KG+  D++ Y SLI    +   + +A  L   M  +  +  +  Y   I GFC
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
               + E+  VL+ M   G  P++T Y  LI      G   EA  L N + S+
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 193/397 (48%), Gaps = 22/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+    N ++    +  Q  L  ++ D L      P+V T+NI+I  LC  G +  A  +
Sbjct: 167 PNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEARAL 222

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++    C P V+TY  LI                D  G C  G + +  Q V  +   
Sbjct: 223 FVRMKAMGCSPDVVTYNSLI----------------DGYGKC--GDLEEVEQLVSEMRKS 264

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC  DV++YN L+      G+ E+      EM  +G+  NVVT+S  + + C++G  ++A
Sbjct: 265 GCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEA 324

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +    + +G+ P+ ++Y  L+   CK GRLD AI  LD M+  G +P++V Y  ++  
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 384

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G   +A  +   +   G   N   Y T+    + + +  RAL ++++M +KG+E D
Sbjct: 385 LCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELD 444

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
              Y +LI  LC+D  VDEA  LL  M     RP  + Y  I+    K  + +E++ +L 
Sbjct: 445 VSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            + + G +PN  TY  LI+G+   G  +EA+   N +
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 197/447 (44%), Gaps = 53/447 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF------------FQERK 87
           +  LI    + G  +E    +  M  +GC  DVV    LI  F            F E K
Sbjct: 238 YNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMK 297

Query: 88  SNKAVR-----------------VMEILEKYGE-------PDVFAYNALISGFCKANQIE 123
               V                  V E ++ + +       P+ F Y +L+ G CKA +++
Sbjct: 298 RQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 357

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +LD +  +G  P+VVTY +M+  LC  G +  A  V   + R   K   + YT LI
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
               +   +++A+ LL++M                 G+CK   V +A   +  +   G +
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+ + Y  ++  L   GK  E   L+ +++  G +PNVVTY  LI  LC+ G   +A+  
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               +E GL P+  +Y  LI  +CK G L+ A+  ++ MI  G   D V Y +++  + K
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N   A  +  K+ + G   ++  Y    S   +      A G++SEM+  GI PD+  
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMEST 433
           YN LI    + G ++EA  L  +MES 
Sbjct: 658 YNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 18/345 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+  + +AG+ D+++  ++ MV  G  P+VV  T ++    +E K  +A  V+ 
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++E+ G + +   Y  LI G    N  E A  +L++++++G   DV  Y  +I  LC   
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++ A  +  ++     +P  + YT ++ A    G+  +A+ LL ++             
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC 519

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G + +A      +   G  P+V +Y  L+     +G   +   LM EMI +
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+  + V Y+ LI    +    +DA  +     E GL  D Y Y   IS +C    +  A
Sbjct: 580 GMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEA 639

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
              L  MI  G  PD   YN ++  + K GN ++A  +  ++  V
Sbjct: 640 RGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 1/171 (0%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI    +AG   E++     M   G  P+V   T LI  F +    NKA+
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +M E+++K    D   Y +LI G+ K   ++ A  +  ++   G   D+  Y   I   
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           C+  M++ A  V  +++     P    Y  LI+     G  ++A  L +EM
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 242/467 (51%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+  +++  +  M   G +P++ +C   I       +  KA+R  E +   G  P+V 
Sbjct: 293 RAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVV 352

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C  +Q++ A +++D++ S+G SPD V+Y  ++G LC    +    ++  ++
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412

Query: 168 LRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGM 209
             D+   P  +TY  LIQ     G  D+A+++L E                    CK+G 
Sbjct: 413 QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGK 472

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + S+GC PDV++Y  +L     +GK ++ +K+M +M     +PN VTY+ 
Sbjct: 473 IQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            ++ LCR+GK+ +A  ++  ++E+  TP+A +Y  ++    ++G+L+ A + +  MI  G
Sbjct: 533 FLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG 592

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+ V  N ++ + C++G   +A ++ ++  + GC  NV ++ T+        D   AL
Sbjct: 593 FFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAAL 652

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +TY +LI  L +   ++EA  L + M      P+ ++Y  +I  +
Sbjct: 653 SLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQY 712

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+ + +++L  M  K     +T Y L+IE +   G+  EA  L
Sbjct: 713 CRKGRVEDLLKLLKKMLLKS--RFQTAYNLVIEKLCKFGYLEEANSL 757



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 192/382 (50%), Gaps = 21/382 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F +  ++  + +A ++  A KVL  ++  G  P++   N  I  L     ++ A + 
Sbjct: 281 PEAFGF--VMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRF 338

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            ++++     P V+TY  LI+      Q D+AM+L+D+M                   S+
Sbjct: 339 AERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQM------------------PSK 380

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTED 282
           GC PD +SY  ++  L    +  E  +L+ +M +   L P+ VTY+ LI  L + G  ++
Sbjct: 381 GCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDE 440

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+++L+ A++     D   Y  ++ AYCK+G++  A E +  M S GC PD+V Y ++L 
Sbjct: 441 ALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLD 500

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FC+ G  DQA ++ +++    C PN  +Y T  + L  +G  + A  M++    +   P
Sbjct: 501 GFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTP 560

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITY+ ++  L R+G ++EA  ++ +M    F P  +  N+++   C+  +  E+ ++L
Sbjct: 561 NAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLL 620

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
                KGC  N   +  +I G 
Sbjct: 621 KECMNKGCAVNVVNFTTVIHGF 642



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 152/297 (51%), Gaps = 1/297 (0%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A + +  ++  G +P++   N  +  L+   + ++  +    M+  G+ PNVV
Sbjct: 293 RAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVV 352

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI   C   + + A++++     KG +PD  SY  ++   C+D RL+   E +  M
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412

Query: 326 ISDG-CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +D   LPD V YN+++    K+G+ D+ALEI ++   +    +   Y+ +  A    G 
Sbjct: 413 QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGK 472

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  ++SEM SKG +PD +TY S++   CR G +D+A  ++  M     +P  ++Y  
Sbjct: 473 IQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            + G C+  +  E+ +++    E+   PN  TY +++ G+   G   EA ++   ++
Sbjct: 533 FLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMI 589



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 151/296 (51%), Gaps = 1/296 (0%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + K  +   A + +R +  R  Q    ++  ++ +    G+  +  K++T M   G+EPN
Sbjct: 256 LSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPN 315

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +   +  I  L    + + A+         G+ P+  +Y+ LI  YC   ++D A+E +D
Sbjct: 316 LSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELID 375

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSS 382
            M S GC PD V+Y T++   C++   ++  E+ +K+ +D    P+  +YN++   L   
Sbjct: 376 QMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKH 435

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    AL ++ E      + D++ Y++++   C++G + +A  L+ +M S    P V++Y
Sbjct: 436 GHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTY 495

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             ++ GFC+  +++++ +++  M++  CKPN  TY   + G+   G   EA ++ N
Sbjct: 496 TSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMN 551



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 13/295 (4%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           + D   Y ++L  L      +  ++++  M  R ++     +  ++ S  R G+  DA+ 
Sbjct: 243 RHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMK 302

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL   ++ G+ P+    +  I        L  A+ F + M+  G  P++V YN ++  +C
Sbjct: 303 VLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYC 362

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-----GI 400
                DQA+E+ +++   GC P+  SY T+   L       + L  I E++ K      +
Sbjct: 363 NVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRD----KRLNEIRELIKKMQTDSKL 418

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD +TYNSLI  L + G  DEA+ +L + E  RF+   + Y+ I+  +CK  +I ++ E
Sbjct: 419 LPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKE 478

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH----AISRDTF 511
           +++ MF KGC P+  TY  +++G    G   +A ++   +   H    A++  TF
Sbjct: 479 LVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTF 533



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/410 (22%), Positives = 179/410 (43%), Gaps = 51/410 (12%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PD V    LI+   +    ++A+ +++  EK   + D   Y+A++  +CK  +I+ A ++
Sbjct: 420 PDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKEL 479

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           +  + S+G  PDVVTY  ++   C  G ++ A K+  Q+ + +CKP  +TYT  +     
Sbjct: 480 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCR 539

Query: 189 EGQTDKAMKLLDE-----------------MGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G++ +A K+++                   G+ ++G + +A   VR +  +G  P+ + 
Sbjct: 540 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 599

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            N+L+ +L   GK  E  +L+ E +++G   NVV ++ +I   C+    E A+ +L    
Sbjct: 600 INLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY-------------- 337
                PD  +Y  LI A  K  R++ A E    M+  G +P  V Y              
Sbjct: 660 LCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 719

Query: 338 -------------------NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                              N ++   CK G  ++A  +  ++       +  + + +  +
Sbjct: 720 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 779

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             + G  + A  +   M ++ + PD      +   L  +G ++EA  L++
Sbjct: 780 YLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVL 829


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 253/548 (46%), Gaps = 73/548 (13%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E + +KL   S      D+++ F + MV +      V C K+I  F +  + + A+ +  
Sbjct: 71  EGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYR 130

Query: 97  ILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E    P +++++N LI  FC  +++  +     +L   GF PDVVT+N ++  LC   
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 156 MIESAF----------KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            I  A            +FDQ++     P VIT+  LI    LEG+  +A  L+++M   
Sbjct: 191 RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 250

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         GMCK G    A   +  +E    +PDV+ Y+ ++  L   G   + 
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           + L +EM+ +G+ PNV TY+ +I   C  G+  DA  +LR   E+ + PD  +++ LISA
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370

Query: 309 -----------------------------------YCKDGRLDLAIEFLDYMISDGCLPD 333
                                              +CK  R D A    D M S    PD
Sbjct: 371 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 426

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V +NTI+  +C+    D+ +++  ++S  G   N ++YNT+        +   A  +  
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S G+ PD IT N L+   C +  ++EA+ L   ++ ++     ++YNIII G CK  
Sbjct: 487 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 546

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
           +++E+ ++  ++   G +P+  TY ++I   G+ G  A    +++A V  H +  +  + 
Sbjct: 547 KVDEAWDLFCSLPIHGVEPDVQTYNVMIS--GFCGKSA----ISDANVLFHKMKDNGHEP 600

Query: 514 LNRTFPLL 521
            N T+  L
Sbjct: 601 DNSTYNTL 608



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 23/431 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      G+  E+   +  MV  G   DVV    ++    +   +  A+ ++  +E
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + + +PDV  Y+A+I   CK      A  +   +  +G +P+V TYN MI   CS G   
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++     P V+T+  LI A++ EG+  +A KL DEM                
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---------------- 387

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               R   PD ++YN ++       ++++ + +   M S    P+VVT++ +I   CR  
Sbjct: 388 --LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 441

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++ + +LR    +GL  +  +Y+ LI  +C+   L+ A +    MIS G  PD +  N
Sbjct: 442 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 501

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FC+N   ++ALE+FE +       +  +YN +   +        A  +   +   
Sbjct: 502 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 561

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EPD  TYN +IS  C    + +A  L   M+     P   +YN +I G  K   I++S
Sbjct: 562 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 621

Query: 459 IEVLAAMFEKG 469
           IE+++ M   G
Sbjct: 622 IELISEMRSNG 632



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 14/330 (4%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R +E R    ++ S+N+L++   +  K         ++   G +P+VVT++ L+ 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 273 SLCRDGKTEDAV----------DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            LC + +  +A+           +     E GLTP   +++ LI+  C +GR+  A   +
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M+  G   D+V Y TI+   CK G+   AL +  K+ +    P+V  Y+ +   L   
Sbjct: 245 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 304

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  + SEML KGI P+  TYN +I   C  G   +A  LL DM      P V+++
Sbjct: 305 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 364

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N +I    K  ++ E+ ++   M  +   P+  TY  +I G        +A  + + + S
Sbjct: 365 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 424

Query: 503 MHAISRDT----FKRLNRTFPLLDVYKEIS 528
              ++ +T    + R  R    + + +EIS
Sbjct: 425 PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 454



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    +  K DE+     S+  +G +PDV     +I  F  +   + A  
Sbjct: 529 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 588

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +   ++  G EPD   YN LI G  KA +I+ + +++  +RS GFS D  T   M+  L 
Sbjct: 589 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLI 647

Query: 153 SRGMIESAF 161
           + G ++ +F
Sbjct: 648 TDGRLDKSF 656


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 233/454 (51%), Gaps = 19/454 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R  +  +++ F+         P VV    L+  F +    + A     ++ KYG  PDV+
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN L+ G C A  +E A +  + + + G  PD+VTYNI+       G+I  A+KV  ++
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L +   P ++TYTILI                   G C+ G + ++F+    + S+G + 
Sbjct: 367 LLNGLNPDLVTYTILI------------------CGHCQMGNIEESFKLKEKMLSQGLKL 408

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +++Y +LL +L   G+ +E   L+ EM   GL+P+++TYS+LI  LC+ G  E+A+++ 
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELY 468

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                K + P+++    +IS   + G +  A  + D +       +I+ YN ++  + K 
Sbjct: 469 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 528

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A+  ++++ + G  P + ++N++       G    A+ ++  +   G+ P  +TY
Sbjct: 529 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 588

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L++  C +G +     +L +ME+   +PT I+Y +++ G CK  R++ES+++L  M+ 
Sbjct: 589 TTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYA 648

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +G  P++ TY  +I+         +A +L N ++
Sbjct: 649 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 682



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 217/438 (49%), Gaps = 18/438 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  +E+L F   M  +G +PD+V    L   F      + A +V++ +   G  PD+  
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI G C+   IE + K+ +++ S+G    +VTY +++ SLC  G I+ A  +  ++ 
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               KP ++TY++LI      G  ++A++L +EM                 G+ +KG + 
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  +  S+       ++I YN+++     +G   E  +   ++I +G+ P +VT++ LI
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C+ GK  +AV +L   K  GL P + +Y  L++ YC++G +    + L  M +    
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  + Y  ++   CK G   +++++ + +   G  P+  +YNT+  +   + D  +A  +
Sbjct: 618 PTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            ++ML   ++P  +TYN LI+ LC  G + +A  LLV ++    R T ++Y  II   C 
Sbjct: 678 HNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCA 737

Query: 452 TRRINESIEVLAAMFEKG 469
              +  ++     M E+G
Sbjct: 738 KGDVQNALVFFHQMVERG 755



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 19/361 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
           +I   F  G   E+  + +S+  +    ++++   +I  + +     +AVR   +I+EK 
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P +  +N+LI GFCK  ++  A K+LD ++  G  P  VTY  ++   C  G + S F
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  ++     KPT ITYT++++                  G+CK+G + ++ Q ++ + 
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVK------------------GLCKEGRLHESVQLLKYMY 647

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           +RG  PD I+YN ++++       ++  +L  +M+   L+P+ VTY++LI+ LC  G  +
Sbjct: 648 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 707

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA  +L   +++ +     +Y  +I A+C  G +  A+ F   M+  G    I +Y+ ++
Sbjct: 708 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 767

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK      A   F  +   G PP+      M +A   SGD      + + M+  G+ 
Sbjct: 768 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 827

Query: 402 P 402
           P
Sbjct: 828 P 828



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 6/377 (1%)

Query: 128 VLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           + D LR+  GF    V++ I+   +  +G  +   +V +Q++ +    +  +   L+  +
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG-KW 245
             +   +  +  +      +  MV  A   +  ++    Q  + +YN LL  L +    W
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW 220

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +    +  E+ + G+  N  T  ILI  LCR  + +DAV  LR    +   P   S++ L
Sbjct: 221 D----VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +S +CK G +D+A  F   MI  G LPD+ +YN +L   C  G+ ++ALE    + + G 
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P++ +YN + +     G    A  ++  ML  G+ PD +TY  LI   C+ G ++E+  
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L   M S   + ++++Y +++   CK+ RI+E++ +L  M   G KP+  TY +LI G+ 
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLC 456

Query: 486 YGGWRAEAMELANALVS 502
             G   EA+EL   + S
Sbjct: 457 KRGAVEEAIELYEEMCS 473


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 248/545 (45%), Gaps = 96/545 (17%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           +D     +  LI    ++G  D +   ++ M   GC P+VV  T LI    + R+ + A+
Sbjct: 6   YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           + ++ + + G EPD+  YN+LI G C AN+++ A  VL  L   GF+P+ +TY+ ++   
Sbjct: 66  QTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWN 125

Query: 152 CSRGMIESAFKVFDQLL--------------------------RDNCK-----------P 174
           C R  ++ A  +  +++                          R  C+           P
Sbjct: 126 CRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
            V+TY   I      G+ DK +++L+EM                 G+CK   +  AFQ  
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 218 RSLESRGCQPDVISYNMLLR-------------------------------------TLL 240
           + +  RGC PD ++Y+++L                                       L 
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDA 299
             GK+   + ++  MI  G  PN+++Y+ +I  LC+ G  +DA  + R   + G   PD 
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAAFCKNGNADQALEIFE 358
             ++ LIS +CK GRL  A + L  M +   C+PD+V YNT++    K G+  QA  + +
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++  VGC PNV +Y  + +     G    A  +  EM +KG  PD ITYN+++S   + G
Sbjct: 426 EMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485

Query: 419 MVDEAVGLLVDM--ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           M+ +A G+   +  +++   P  I+Y I+I G+C+     + + +L  M  +G   +  T
Sbjct: 486 MMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYT 545

Query: 477 YVLLI 481
           Y +LI
Sbjct: 546 YNVLI 550



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 211/452 (46%), Gaps = 58/452 (12%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +  V  Y  LI G CK+  ++ A  +L ++   G +P+VVTY  +I  LC       A +
Sbjct: 7   DASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQ 66

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
              ++LR  C+P ++TY  LI    +  + D A  +L E+                   C
Sbjct: 67  TVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNC 126

Query: 206 KKGMVGQAFQFVRSLESRG-------------------CQ------------------PD 228
           ++  + QA   +R +  RG                   CQ                  PD
Sbjct: 127 RRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPD 186

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++YN  +  L   GK ++G +++ EM   G+ P+VVT+  +IS LC+  + +DA  V +
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFK 246

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM--ISDGCLPDIVNYNTILAAFCK 346
              E+G  PD+ +Y  ++    +  RLD   E L++M  +  GC+ ++  +N  + A C+
Sbjct: 247 GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-IEPDEI 405
           +G    A  I   + + G  PN+ SYN +   L  SG+   A  +  +ML  G  +PD I
Sbjct: 307 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 366

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAA 464
            +N+LIS  C+ G + +A  LL++M++     P V++YN +I G  K   + ++  +L  
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQE 426

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           M   GCKPN  TY  LI G    G   EA  L
Sbjct: 427 MQAVGCKPNVVTYAALINGYAKHGMYEEAESL 458



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 189/415 (45%), Gaps = 63/415 (15%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + + G+   VVTY  +I  LC  G +++A  +  ++    C P V+TYT LI        
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALID------- 53

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G+CK      A Q V+ +   GC+PD+++YN L+  L    + ++   +
Sbjct: 54  -----------GLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 102

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR----------------------- 288
           + E++  G  PN +TYS L+   CR  + + A  ++R                       
Sbjct: 103 LQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCE 162

Query: 289 --------------AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
                            E G  PD  +Y+  IS  CK G+LD  +E L+ M   G  PD+
Sbjct: 163 ARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDV 222

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V + +I++  CK    D A ++F+ + + GC P+  +Y+ M   L S  +++  +  + E
Sbjct: 223 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL-SRANRLDTVDEVLE 281

Query: 395 MLS---KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            +     G   +  T+N+ I  LCR G    A  +L+ M  +   P ++SYN +I G CK
Sbjct: 282 HMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 341

Query: 452 TRRINESIEVLAAMFEKG-CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           +  ++++ ++   M + G CKP+   +  LI G    G  ++A +L   L+ M A
Sbjct: 342 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQL---LIEMKA 393



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 198/407 (48%), Gaps = 25/407 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +AGK D+ L  +E M   G  PDVV    +I    +  + + A +V + +LE+   PD  
Sbjct: 199 KAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 258

Query: 108 AYNALISGFCKANQIELANKVLDRLRS--RGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            Y+ ++    +AN+++  ++VL+ +++   G   +V T+N  IG+LC  G    A  +  
Sbjct: 259 TYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILL 318

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKK 207
            ++     P +++Y  +I      G  D A KL  +M                  G CK 
Sbjct: 319 GMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKA 378

Query: 208 GMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G + QA Q +  ++++  C PDV++YN L+      G  ++ + L+ EM + G +PNVVT
Sbjct: 379 GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVT 438

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI+   + G  E+A  +      KG  PD  +Y+ ++SA+ K G +  A      + 
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK 498

Query: 327 SDG--CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           +    C PD + Y  ++  +C+  + +Q L + ++++  G   +  +YN + + L  + +
Sbjct: 499 NKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEE 558

Query: 385 -KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
              +AL +  +ML +   P    +NSL+    R G V+ A  ++ +M
Sbjct: 559 VPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 185/385 (48%), Gaps = 25/385 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    +A + D++    + M+  GC PD +  + ++    +  + +    V+E ++
Sbjct: 225 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQ 284

Query: 100 KYGEP---DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                   +V+ +NA I   C++ +  LA  +L  +   G  P++++YN +I  LC  G 
Sbjct: 285 AMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 344

Query: 157 IESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
           ++ A+K+  ++L   C KP VI +  LI      G+  +A +LL EM             
Sbjct: 345 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTY 404

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G  K G + QA   ++ +++ GC+P+V++Y  L+      G +EE E L  EM +
Sbjct: 405 NTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSA 464

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYDPLISAYCKDGRL 315
           +G  P+++TY+ ++S+  + G    A  V +  K K    +PDA +Y  LI  YC+    
Sbjct: 465 KGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDT 524

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA-DQALEIFEKLSDVGCPPNVSSYNT 374
           +  +  L  M + G   D   YN ++A   +      +AL +++++ D  C P+ S +N+
Sbjct: 525 EQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNS 584

Query: 375 MFSALWSSGDKIRALGMISEMLSKG 399
           +      +GD   A  M+ EM  KG
Sbjct: 585 LVRLFLRTGDVNSARSMVQEMNEKG 609


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 198/380 (52%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV +Y+ +I+G+C   +++   K++  ++ +G  P++ TYN +I  LC  G ++ A +V
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             +++     P  + YT LI                   G CK G +  A++    +E +
Sbjct: 68  LREMINQGIVPDTVVYTTLID------------------GFCKLGNIQAAYKLFDEMEKQ 109

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD I+Y  ++  L   GK  E +K+  +M SRG+EP+ VTY+ LI   C+ G+ E A
Sbjct: 110 RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKA 169

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +     + GLTP+  +Y  L    CK G++D A E L  M   G   +I  YN+++  
Sbjct: 170 FSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNG 229

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK+GN  QA+++ E++   G  P+  ++ T+  A   +G+ ++A  ++ EML +G++P 
Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N L++  C  GM+++   LL  M      P   +YN ++  +C    +  + E+  
Sbjct: 290 VITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYK 349

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  +G  P+  TY +LI+G
Sbjct: 350 GMCARGVMPDSNTYNILIKG 369



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 211/412 (51%), Gaps = 19/412 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  PDVV  + +I  +    +  K +++++ ++  G +P+++ YN++I   CK+ +++ A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +VL  + ++G  PD V Y  +I   C  G I++A+K+FD++ +    P  I YT +I  
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVI-- 122

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+C+ G + +A +    + SRG +PD ++Y  L+      G+ 
Sbjct: 123 ----------------CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E+   L  +M+  GL PNVVTY+ L   LC+ G+ + A ++L     KGL  +  +Y+ L
Sbjct: 167 EKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           ++  CK G +  A++ ++ M   G  PD + + T++ A+CK G   +A E+  ++ D G 
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P V ++N + +    SG       +++ ML KGI P+  TYNSL+   C    +     
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           +   M +    P   +YNI+I G CK R + E+  +   M EKG     ++Y
Sbjct: 347 IYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 195/396 (49%), Gaps = 18/396 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++GK D++   +  M+  G  PD V+ T LI  F +      A ++ + +EK    PD  
Sbjct: 57  KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFI 116

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY A+I G C+  ++  A+KV +++ SRG  PD VTY  +I   C  G +E AF + +Q+
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           ++    P V+TYT L       GQ D A +LL EM                 G+CK G +
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA + +  +E  G  PD I++  L+      G+  +  +L+ EM+ RGL+P V+T+++L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C  G  ED   +L    EKG+ P+  +Y+ L+  YC    +    E    M + G 
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD   YN ++   CK  N  +A  + +++++ G     SSYN++    +       A  
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           +  EM  +G+  D   YN  +     +G ++ A+ L
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 220/461 (47%), Gaps = 21/461 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
            G+  + L  I+ M   G KP++     +I    +  K + A RV+ E++ +   PD   
Sbjct: 23  GGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVV 82

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI GFCK   I+ A K+ D +  +   PD + Y  +I  LC  G +  A KVF+++ 
Sbjct: 83  YTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF 142

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P  +TYT LI                   G CK G + +AF     +   G  P+
Sbjct: 143 SRGVEPDEVTYTTLID------------------GYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  L   L  +G+ +   +L+ EM  +GL+ N+ TY+ L++ LC+ G    AV ++ 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  G+ PD  ++  L+ AYCK G +  A E L  M+  G  P ++ +N ++  FC +G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             +    +   + + G  PN ++YN++        +      +   M ++G+ PD  TYN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C+   + EA  L  +M    F  T  SYN II GF K ++I+E+ E+   M  +
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 469 GCKPNETTYVLLIEGIGYGGWRAE-AMELANALVSMHAISR 508
           G   +   Y L ++ I YG    E A+EL +  +    ++R
Sbjct: 425 GMAADAEIYNLFVD-ISYGEGNMETALELCDEAIENCFLNR 464



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 166/315 (52%), Gaps = 18/315 (5%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V++Y+ +I    L G+  K +KL+ EM M                  +G +P++ +YN
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQM------------------KGLKPNLYTYN 49

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            ++  L   GK ++ E+++ EMI++G+ P+ V Y+ LI   C+ G  + A  +    +++
Sbjct: 50  SIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ 109

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            + PD  +Y  +I   C+ G++  A +  + M S G  PD V Y T++  +CK+G  ++A
Sbjct: 110 RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKA 169

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +  ++   G  PNV +Y  +   L   G    A  ++ EM  KG++ +  TYNSL++ 
Sbjct: 170 FSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNG 229

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+ G + +AV L+ +ME     P  I++  ++  +CKT  + ++ E+L  M ++G +P 
Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289

Query: 474 ETTYVLLIEGIGYGG 488
             T+ +L+ G    G
Sbjct: 290 VITFNVLMNGFCMSG 304



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 146/274 (53%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RG  PDV+SY+ ++      G+ ++  KL+ EM  +GL+PN+ TY+ +I  LC+ GK +D
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VLR    +G+ PD   Y  LI  +CK G +  A +  D M     +PD + Y  ++ 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C+ G   +A ++F K+   G  P+  +Y T+      SG+  +A  + ++M+  G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TY +L   LC+ G VD A  LL +M     +  + +YN ++ G CK+  I ++++++
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M   G  P+  T+  L++     G   +A EL
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 35/174 (20%)

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE- 422
           G  P+V SY+T+ +     G+  + L +I EM  KG++P+  TYNS+I  LC+ G VD+ 
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 423 ----------------------------------AVGLLVDMESTRFRPTVISYNIIILG 448
                                             A  L  +ME  R  P  I+Y  +I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            C+  ++ E+ +V   MF +G +P+E TY  LI+G    G   +A  L N +V 
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 221/489 (45%), Gaps = 18/489 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    R GK D +L F+  MV  G K  V     LI    +    + A   M E++ K 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP V  Y +L+ G+C   +I  A ++   +  +G +P + T+  ++  L   G+I  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+F+++   N KP  +TY ++I+    EG   KA + L EM                 G+
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G   +A  FV  L    C+ + I Y  LL      GK EE   +  EM+ RG++ ++
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y +LI    +    +    +L+   ++GL PD   Y  +I A  K G    A    D 
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI++GC+P+ V Y  ++   CK G  ++A  +  K+  V   PN  +Y      L     
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            ++    +   + KG+  +  TYN LI   CR G ++EA  L+  M      P  I+Y  
Sbjct: 768 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I   C+   + ++IE+  +M EKG +P+   Y  LI G    G   +A EL N ++   
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887

Query: 505 AISRDTFKR 513
            I  +   R
Sbjct: 888 LIPNNKTSR 896



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 231/504 (45%), Gaps = 19/504 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  +F+  L  ++ M+     P     + L++   +  K  +A+ +++ +  +G  P++F
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI   CK  +   A  + DR+   G  P+ VTY+I+I   C RG +++A     ++
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    K +V  Y  LI      G    A   + EM                 G C KG +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +  +G  P + ++  LL  L   G   +  KL  EM    ++PN VTY+++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C +G    A + L+   EKG+ PD YSY PLI   C  G+   A  F+D +    C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             + + Y  +L  FC+ G  ++AL + +++   G   ++  Y  +        D+    G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  +G++PD++ Y S+I    + G   EA G+   M +    P  ++Y  +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE-AMELANALVSMHAISRD 509
           K   +NE+  + + M      PN+ TY   ++ +  G    + A+EL NA++     +  
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788

Query: 510 TFKRLNRTFPLLDVYKEISHLATK 533
           T+  L R F      +E S L T+
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITR 812



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 218/452 (48%), Gaps = 19/452 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
            F  ++     MV+ G +PDV + T +I+   + +  ++A  ++  +E  G + ++  YN
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN 266

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G CK  ++  A  +   L  +   PDVVTY  ++  LC     E   ++ D++L  
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P+    + L++                  G+ K+G + +A   V+ +   G  P++ 
Sbjct: 327 RFSPSEAAVSSLVE------------------GLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            YN L+ +L    K+ E E L   M   GL PN VTYSILI   CR GK + A+  L   
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            + GL    Y Y+ LI+ +CK G +  A  F+  MI+    P +V Y +++  +C  G  
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++AL ++ +++  G  P++ ++ T+ S L+ +G    A+ + +EM    ++P+ +TYN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I   C +G + +A   L +M      P   SY  +I G C T + +E+   +  + +  C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + NE  Y  L+ G    G   EA+ +   +V 
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 186/415 (44%), Gaps = 53/415 (12%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           GK +++L     M   G  P +   T L+   F+      AV++  E+ E   +P+   Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I G+C+   +  A + L  +  +G  PD  +Y  +I  LC  G    A    D L +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------GMCKKGMVGQA---- 213
            NC+   I YT L+     EG+ ++A+ +  EM            G+   G +       
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665

Query: 214 -FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            F  ++ +  RG +PD + Y  ++      G ++E   +   MI+ G  PN VTY+ +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 273 SLCRDGKTEDA------------------------------VDVLRA-----AKEKGLTP 297
            LC+ G   +A                              VD+ +A     A  KGL  
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI  +C+ GR++ A E +  MI DG  PD + Y T++   C+  +  +A+E++
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
             +++ G  P+  +YNT+      +G+  +A  + +EML +G+ P+  T  +  S
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 183/438 (41%), Gaps = 74/438 (16%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESA-----------------FKV-------------- 163
           RGF     ++ I+I +L    +   A                 F V              
Sbjct: 98  RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157

Query: 164 -FDQLLRDNCKPT-----VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            FD L++   +       V+ + ++I    L  +      LL   G+ K    G A +  
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH--GLVKFRHFGLAMELF 215

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S G +PDV  Y  ++R+L  +      ++++  M + G + N+V Y++LI  LC+ 
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM------------ 325
            K  +AV + +    K L PD  +Y  L+   CK    ++ +E +D M            
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335

Query: 326 -----------------------ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
                                  +  G  P++  YN ++ + CK     +A  +F+++  
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +G  PN  +Y+ +       G    AL  + EM+  G++     YNSLI+  C+ G +  
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A G + +M + +  PTV++Y  ++ G+C   +IN+++ +   M  KG  P+  T+  L+ 
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515

Query: 483 GIGYGGWRAEAMELANAL 500
           G+   G   +A++L N +
Sbjct: 516 GLFRAGLIRDAVKLFNEM 533



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 146/358 (40%), Gaps = 60/358 (16%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H  + ++ E  +  L+    R GK +E+L   + MV  G   D+V               
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV--------------- 648

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
                               Y  LI G  K    +L   +L  +  RG  PD V Y  MI
Sbjct: 649 -------------------CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +    G  + AF ++D ++ + C P  +TYT +I                   G+CK G
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN------------------GLCKAG 731

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTL----LNMGKWEEGEKLMTEMISRGLEPNV 264
            V +A      ++     P+ ++Y   L  L    ++M K  E    +   I +GL  N 
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANT 787

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY++LI   CR G+ E+A +++      G++PD  +Y  +I+  C+   +  AIE  + 
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           M   G  PD V YNT++   C  G   +A E+  ++   G  PN  +  T  S   SS
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSS 905


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 212/449 (47%), Gaps = 19/449 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI     A + DE+L     M  + C P V   T +I    Q  +  +A+ +  
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK+ +P+V  Y  LI   C+ +  + A K+L+ +  +G  P VVTYN +I   C +G
Sbjct: 334 EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKG 393

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           +  SA ++   +  +NC P   TY  LI                  +G C+   + +A  
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELI------------------LGFCRGKNIHKAMS 435

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  R  QP+V++YN+L+      G      KL++ M   GL P+  TYS+ I +LC
Sbjct: 436 LLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  E+A  +  + KEKG+  +   Y  LI  YCK G++      LD M+S GC+P+ +
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YN+++  +CK  N  +A  + + +      P   +Y  +   L    +  +A  M  +M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           LS G  PD   Y + I   C  G + +A  L+  M +    P  + Y + I  + +   I
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           + +  +L  M E GC+P+  TY  LI+ +
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHL 704



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 189/389 (48%), Gaps = 18/389 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L+    P++F  N +++G+CK   +  A   + ++   G S D  TY  +I   C  
Sbjct: 193 LEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 252

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             +++A  +F  +    C    ++YT LI                   G C+   V +A 
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIH------------------GFCEARRVDEAL 294

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +    +    C P V +Y +++  L  +G+  E   +  EM  +  +PNV TY++LI SL
Sbjct: 295 KLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSL 354

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C D   +DA  +L    EKGL P   +Y+ LI  YCK G    A+E L  M S+ C P+ 
Sbjct: 355 CEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNA 414

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++  FC+  N  +A+ +  K+ +    PNV +YN +       GD   A  ++S 
Sbjct: 415 RTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSL 474

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M   G+ PDE TY+  I  LC+ G+V+EA  L   ++    +   + Y+ +I G+CK  +
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +++   +L  M   GC PN  TY  LI+G
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDG 563



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 210/458 (45%), Gaps = 18/458 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+  ++  +V  G   D    T LI  + + +  + A  +   +   G   +  
Sbjct: 216 KLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEV 275

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  LI GFC+A +++ A K+  ++      P V TY ++I +LC  G    A  +F ++
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
              +C+P V TYT+LI +   +   D A K+L+ M                 G CKKG+ 
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  +ES  C P+  +YN L+          +   L+ +M+ R L+PNVVTY+IL
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C++G    A  +L    E GL PD ++Y   I   CK G ++ A    + +   G 
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             + V Y+T++  +CK G       + +K+   GC PN  +YN++        +   A  
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++  M+ + IEP   TY  LI  L +D   D+A  +   M ST   P V  Y   I  +C
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
              R+ ++  ++  M  KG  P+   Y L I+  G  G
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG 673



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 216/518 (41%), Gaps = 82/518 (15%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+  E+L   + M    C+P+V   T LI    ++   + A +++  +LEK   P V 
Sbjct: 321 QLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVV 380

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI G+CK      A ++L  + S   SP+  TYN +I   C    I  A  +  ++
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
           L    +P V+TY ILI     EG    A KLL  M                  +CK+G+V
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY--- 267
            +A     SL+ +G + + + Y+ L+     +GK  +G  L+ +M+S G  PN +TY   
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560

Query: 268 --------------------------------SILISSLCRDGKTEDAVDVLRAAKEKGL 295
                                           +ILI +L +D + + A D+       G 
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD + Y   I AYC  GRL  A   +  M + G +PD + Y   + A+ + G+ D A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 356 IFEKLSDVGCPPNVSSYNTM-----------------------------FSALWSSGDKI 386
           I +++ +VGC P+  +Y+ +                             FS  W   D  
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
             L +  +M   G  P+  TY   I+ LC+ G ++ A  L   M+     P    YN ++
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              C+     E+I  L  M E    P+  +  LL+ G+
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL 838



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 212/489 (43%), Gaps = 47/489 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           LI    + G    +L  +  M +N C P+     +LI  F + +  +KA+ ++  +LE+ 
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  YN LI G CK   +  A K+L  +   G  PD  TY++ I +LC RG++E A 
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F+ L     K   + Y+ LI      G+      LLD+M                 G 
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+    +A   V  +  R  +P   +Y +L+  LL   ++++   +  +M+S G  P+V
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+  I + C  G+ +DA  ++     KG+ PD   Y   I AY + G +D A   L  
Sbjct: 625 FIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684

Query: 325 MISDGCLPDIVNYNTILAAFC-----------------------------KNGNADQALE 355
           M   GC P    Y+ ++                                 +  + +  L+
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLD 744

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +F K+++ GC PN ++Y    + L   G    A  +   M  KG  P+E  YNSL+ C C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G+  EA+  L  M   R  P + S  +++ G        ++  V  +  +     +E 
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 476 TYVLLIEGI 484
            + +LI+G+
Sbjct: 865 VWKVLIDGL 873



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 137/270 (50%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YNMLL  L      +E + +  EM+   + PN+ T + +++  C+ G   +A   +    
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + GL+ D ++Y  LI  YC++  +D A      M + GCL + V+Y  ++  FC+    D
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL++F ++ +  C P V +Y  +  AL   G K  AL M  EM  K  +P+  TY  LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC D   D+A  +L  M      P+V++YN +I G+CK      ++E+L+ M    C 
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY  LI G   G    +AM L + ++
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKML 441



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 18/379 (4%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E+   +  R+ +  F   +  YN+++  L    MI+    V+ ++L D   P + T   
Sbjct: 150 LEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNT 209

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           ++                   G CK G V +A  +V  +   G   D  +Y  L+     
Sbjct: 210 MVN------------------GYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCR 251

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
               +    +   M ++G   N V+Y+ LI   C   + ++A+ +     E    P   +
Sbjct: 252 NKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRT 311

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I A C+ GR   A+     M    C P++  Y  ++ + C++ N D A +I   + 
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           + G  P+V +YN +       G    AL ++S M S    P+  TYN LI   CR   + 
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +A+ LL  M   + +P V++YNI+I G CK   +  + ++L+ M E G  P+E TY + I
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491

Query: 482 EGIGYGGWRAEAMELANAL 500
           + +   G   EA  L  +L
Sbjct: 492 DTLCKRGLVEEARSLFESL 510



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/461 (22%), Positives = 188/461 (40%), Gaps = 47/461 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G    +   +  M  +G  PD    +  I    +     +A  + E L++ G
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + +   Y+ LI G+CK  ++     +LD++ S G  P+ +TYN +I   C     + A 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + D +++ + +P   TYTILI   + + + D+A  + D+M                   
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A   +  + ++G  PD + Y + +      G  +    ++  M   G EP+ 
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694

Query: 265 VTYSILISSLC-----------------------------RDGKTEDAVDVLRAAKEKGL 295
            TYS LI  L                              R    E  +D+     E G 
Sbjct: 695 YTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGC 754

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P+A +Y   I+  CK G L++A    D+M   G  P+   YN++L   C+ G   +A+ 
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
             + + +    P++ S   +   L+  G+  +A  +    L      DE+ +  LI  L 
Sbjct: 815 WLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLL 874

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + G+ D+   L   ME+   +    +Y+++I GF   + I+
Sbjct: 875 KKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 84/168 (50%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN +L    +    D+   ++ ++ D    PN+ + NTM +     G+ + A   +S+++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+  D  TY SLI   CR+  VD A  + + M +       +SY  +I GFC+ RR++
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           E++++ + M E  C P   TY ++I  +   G + EA+ +   +   H
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH 339


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 215/450 (47%), Gaps = 19/450 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKV 128
           D  +CT L+    +     +A RV E +  E+   P+   Y+ LI G C+A ++E A ++
Sbjct: 228 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 287

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +  +G  P   TY ++I + C  GM + A K+ D++    C P V TYTILI     
Sbjct: 288 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 347

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           EG+ ++A  +  +M                 G CK+G V  AFQ +  +E   C+P++ +
Sbjct: 348 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 407

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+  L  + K  +   L+  ++  GL P+ VTY+IL+   C++G+   A ++  +  
Sbjct: 408 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 467

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             GL PD +++  LI   CK GRL+ A   L  M+  G   D V +  ++   CK G A 
Sbjct: 468 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 527

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
               +FE + +  C     ++N    AL        A  M+ +M+  G+ P  +T+  LI
Sbjct: 528 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 587

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR G    ++ +L  M+     P V +Y III G C   R+ E+  +L +M   G  
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY +L++     G    A ++ + +V
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 677



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 222/469 (47%), Gaps = 28/469 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ++S     RPN+   S          LI     AG+ +E+    + MV  GC+P     T
Sbjct: 254 KMSKEENCRPNSVTYSI---------LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LIK       ++KA++++ E+  K   P+V  Y  LI   C+  +IE AN V  ++   
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P ++T+N +I   C  G + SAF++   + + NCKP + TY  L++           
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME----------- 413

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C+     +AF  +R +   G  PD ++YN+L+      G+      +   M
Sbjct: 414 -------GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S GLEP+  T++ LI  LC+ G+ E A  +L +  +KG++ D  ++  LI  +CK G+ 
Sbjct: 467 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 526

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                  + M+ + CL     +N  L A  K+   ++A  +  K+   G  P+V ++  +
Sbjct: 527 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 +G+   +L M+  M   G  P+  TY  +I+ LC +G V+EA  +L  M S   
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 646

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            P   +Y +++    K  R++ + ++++ M + GC+PN   Y  L+ G 
Sbjct: 647 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 202/424 (47%), Gaps = 54/424 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +++  CK   ++ A     ++   GF  D      ++ + C R  +  AF+VF+++ 
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256

Query: 169 RD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           ++ NC+P  +TY+ILI                   G+C+ G + +AFQ  + +  +GCQP
Sbjct: 257 KEENCRPNSVTYSILIH------------------GLCEAGRLEEAFQLKQEMVEKGCQP 298

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +L++   ++G  ++  K++ EM ++   PNV TY+ILI  LCR+GK E+A  V 
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM---------------------- 325
           R   + GL P   +++ LI+ YCK+G +  A + L  M                      
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418

Query: 326 -------------ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
                        + +G LPD V YN ++  FCK G  + A  IF  ++  G  P+  ++
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 478

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             +   L   G   +A G++  M+ KGI  DE+T+ +LI   C+ G   +   L  +M  
Sbjct: 479 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 538

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
            R   T  ++N  +    K  ++NE+  +L  M + G  P+  T+ +LIEG    G  A 
Sbjct: 539 NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 598

Query: 493 AMEL 496
           ++++
Sbjct: 599 SLKM 602



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 238/523 (45%), Gaps = 50/523 (9%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H          +  LI R  R GK +E+      M+ +G  P ++    LI  + +E
Sbjct: 333 PNVH---------TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 383

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
                A +++ ++EK   +P++  YN L+ G C+ ++   A  +L R+   G  PD VTY
Sbjct: 384 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 443

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NI++   C  G +  AF +F+ +     +P   T+T LI      G+ ++A  +L  M  
Sbjct: 444 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 503

Query: 203 ---------------GMCKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                          G CK G      F F   +E+R C     ++N  L  L    K  
Sbjct: 504 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR-CLTTAHTFNCFLDALGKDYKLN 562

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   ++ +M+  GL P+VVT++ILI   CR G+T  ++ +L   K+ G +P+ Y+Y  +I
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  C +GR++ A   L  M S G  P+   Y  ++ A  K G  D+A +I   +   GC 
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682

Query: 367 PNVSSYNTMFS------------ALWSSGD-KIRAL-------GMISEMLSKGIEPDEIT 406
           PN   Y+ + S            AL S+GD   R+L         +S  + K   P E  
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL 742

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN L+  LC++G + EA  L  DM      P   + + II  +CKT + +  +E +  + 
Sbjct: 743 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVL 801

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           +    P+  +Y  +I G+   G   EA +L + LV    I  +
Sbjct: 802 DNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEE 844



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 76/433 (17%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K  ++   +  +V NG  PD V    L+  F +E + N A  +   +   G EPD F
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + ALI G CK  ++E AN +L  +  +G S D VT+  +I   C  G  +    +F+ +
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + + C  T  T+   + A   + + ++A  +L +M                 G C+ G  
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             + + +  ++  GC P+V +Y +++  L N G+ EE E ++  M S G+ PN  TY++L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTP------------------------------DAY 300
           + +  + G+ + A  ++    + G  P                              DA 
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 716

Query: 301 S-------------------------YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           S                         Y+ L+   CK+GR+  A +    M+  G  PD  
Sbjct: 717 SLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 776

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             ++I+  +CK    D  LE  + + D    P+ +SY  +   L + G    A  ++S++
Sbjct: 777 -ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835

Query: 396 LSK-GIEPD-EIT 406
           +   GIE + E+T
Sbjct: 836 VRHTGIEEEVEVT 848



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 11/393 (2%)

Query: 118 KANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           ++N +EL  +    + R   +  D+     ++G L SR +   A K    L+++ C+ + 
Sbjct: 79  QSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQE-CEDSE 137

Query: 177 ITYTILIQATMLEGQTDKAMKL----LDEMGMC--KKGMVGQAFQFVRSLESRGCQPDVI 230
                L+ A  L+G T+   +L       + MC  K  M   AF   R + + G     I
Sbjct: 138 NGVVKLMGA--LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 195

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RA 289
            Y  ++  L   G  +  E    +++  G   +    + L+ + CR     +A  V  + 
Sbjct: 196 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 255

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
           +KE+   P++ +Y  LI   C+ GRL+ A +    M+  GC P    Y  ++ A C  G 
Sbjct: 256 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 315

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+++ ++++   C PNV +Y  +   L   G    A G+  +ML  G+ P  IT+N+
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C++G V  A  LL  ME    +P + +YN ++ G C+  +  ++  +L  + + G
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+  TY +L++G    G    A  + N++ S
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 229/487 (47%), Gaps = 37/487 (7%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV E+ F ++I+   R     E++Y   S++   CK   +   +    F   +  N+ +
Sbjct: 409 LDVAESYFGRMIEDGIR-----ETIYPYNSLINGHCKFGDLSAAE----FLYTKMINEGL 459

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
                     EP    +  LISG+CK  Q+E A K+   +  +  +P V T+  +I  LC
Sbjct: 460 ----------EPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
           S   +  A K+FD+++    KPT +TY ++I+        DKA +LL++M          
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C  G V  A  F+  L  +  + + + Y+ LL      G+  E      EM
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           I RG+  ++V +++LI    +    +    +L+   ++GL PD+  Y  +I AY K+G  
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             + E LD M+++ C P++V Y   +   CK G  D+A  +FEK+      PN  +Y   
Sbjct: 690 KKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             +L   G+   A  +  EML KG+  +  TYN LI   C+ G + EA  +L +M     
Sbjct: 750 LDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGI 808

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P  I+Y+ II   C++  +  ++E+   M  KG +P+   + LLI G    G   +A E
Sbjct: 809 FPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFE 868

Query: 496 LANALVS 502
           L N ++S
Sbjct: 869 LRNDMLS 875



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 219/488 (44%), Gaps = 18/488 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  +FD+ +  +  MV  G  P     + L+    ++   + A  ++  L ++G  P++F
Sbjct: 300 RVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLF 359

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+  CK   ++ A  +   + S     + VTY+I+I S C RGM++ A   F ++
Sbjct: 360 VYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRM 419

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + D  + T+  Y  LI      G    A  L  +M                 G CK   V
Sbjct: 420 IEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQV 479

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF+  R +  +   P V ++  L+  L +  +  E  KL  EM+ R ++P  VTY+++
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVM 539

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+    + A ++L      GL PD Y+Y PLIS  C  GR+  A +F+D +     
Sbjct: 540 IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNL 599

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             + + Y+ +L  +C  G   +AL    ++   G   ++  +  +        D  R  G
Sbjct: 600 KLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFG 659

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ +M  +G+ PD + Y S+I    ++G   ++   L  M + +  P V++Y   + G C
Sbjct: 660 LLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLC 719

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I+ +  +   M      PN  TY   ++ +   G   EA +L + ++     +  T
Sbjct: 720 KVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTAT 779

Query: 511 FKRLNRTF 518
           +  L R F
Sbjct: 780 YNILIRGF 787



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 217/473 (45%), Gaps = 24/473 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    +  +  +++  +  M+ N   P+V   + ++    + RK    + V E+ ++  
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRK---FILVWEVFDESV 210

Query: 103 ----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               +PD +  +A+I   C+      A + +  + S  F   +VTYN++I  LC  G + 
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +V   L     K  V+TY  L+       Q D  + L++EM                
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ KKG +  A+  V  L   G  P++  YN L+  L      ++ E L   M S  L 
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            N VTYSILI S C+ G  + A        E G+    Y Y+ LI+ +CK G L  A   
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              MI++G  P    + T+++ +CK+   ++A +++ ++++    P+V ++  +   L S
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS 510

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + +   A  +  EM+ + I+P E+TYN +I   C+   +D+A  LL DM      P   +
Sbjct: 511 TNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           Y  +I G C T R++ + + +  + +K  K NE  Y  L+ G    G   EA+
Sbjct: 571 YRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 228/518 (44%), Gaps = 41/518 (7%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNTHLLSF-------DVKETQFMKLIKRSFRAGKFDE 55
           ++ S + P   E+V +++  +++      +F       +   T F  L+    +   F  
Sbjct: 55  SISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWP 114

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISG 115
           +   + +++  G  P  V      +KF +  K  K                  ++ L+  
Sbjct: 115 ANSLLHTLLLRGSDPKFV-----FEKFLESHKQCKF------------SSTLGFDFLVHS 157

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           + +  ++  A  VL  +      P+V T + ++  L         ++VFD+ +    KP 
Sbjct: 158 YLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPD 217

Query: 176 VITYTILIQAT---------------MLEGQTDKAMKLLDEM--GMCKKGMVGQAFQFVR 218
             T + +I++                M   + D ++   + +  G+CK G V +A +  +
Sbjct: 218 PYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRK 277

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           SL  +G + DV++Y  L+     + ++++G  LM EM+  G  P     S L+  L + G
Sbjct: 278 SLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKG 337

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             + A D++      G  P+ + Y+ LI+A CK   LD A      M S     + V Y+
Sbjct: 338 NIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYS 397

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++ +FCK G  D A   F ++ + G    +  YN++ +     GD   A  + ++M+++
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINE 457

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EP   T+ +LIS  C+D  V++A  L  +M      P+V ++  +I G C T  + E+
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++   M E+  KP E TY ++IEG        +A EL
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 205/496 (41%), Gaps = 98/496 (19%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           T F  LI    +  + +++      M      P V   T LI       +  +A ++  E
Sbjct: 464 TTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDE 523

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E+  +P    YN +I G+CKA+ ++ A ++L+ +   G  PD  TY  +I  LCS G 
Sbjct: 524 MVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGR 583

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           + +A    D L + N K   + Y+ L+     +G+  +A+    EM              
Sbjct: 584 VSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAV 643

Query: 203 ---GMCKKGMVGQAFQFVRSLESRG----------------------------------- 224
              G  K+  + + F  ++ +  +G                                   
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK 703

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P+V++Y   +  L  +G+ +    L  +M++  + PN VTY   + SL ++G  ++A 
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEAT 763

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           D L     KGL  +  +Y+ LI  +CK GRL  A + L  M  +G  PD + Y+TI+   
Sbjct: 764 D-LHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEH 822

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C++G+   A+E                       LW +            ML KG+EPD 
Sbjct: 823 CRSGDVGAAVE-----------------------LWDT------------MLRKGVEPDS 847

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY---------NIIILGFCKTRRI 455
           + +N LI   C +G +D+A  L  DM S   +P  I           N ++ G C T  +
Sbjct: 848 VAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEV 907

Query: 456 NESIEVLAAMFEKGCK 471
           + ++ +  +M  +  K
Sbjct: 908 DTALRLYHSMLTRAVK 923



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 172/392 (43%), Gaps = 28/392 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  +I+   +A   D++   +E M+ NG  PD      LI       + + A   ++
Sbjct: 533 EVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            L K   + +   Y+AL+ G+C   ++  A      +  RG + D+V + ++I     + 
Sbjct: 593 DLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQ 652

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++  F +  ++     +P  + YT +I A   EG   K+ + LD M             
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G + +A      + +    P+ ++Y   L +L   G  +E   L  EM+ +
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-K 771

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL  N  TY+ILI   C+ G+  +A  VL    E G+ PD  +Y  +I  +C+ G +  A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP---------NV 369
           +E  D M+  G  PD V +N ++   C NG  D+A E+   +   G  P         ++
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDL 891

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              N +      +G+   AL +   ML++ ++
Sbjct: 892 GVCNFLMHGGCVTGEVDTALRLYHSMLTRAVK 923


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 256/553 (46%), Gaps = 78/553 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E + +KL   S      D+++ F + MV +      V C K+I  F +  + + A+ +  
Sbjct: 71  EGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYR 130

Query: 97  ILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +E    P +++++N LI  FC  +++  +     +L   GF PDVVT+N ++  LC   
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190

Query: 156 -----------MIESAF----KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
                      M+E+ F     +FDQ++     P VIT+  LI    LEG+  +A  L++
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           +M                 GMCK G    A   +  +E    +PDV+ Y+ ++  L   G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
              + + L +EM+ +G+ PNV TY+ +I   C  G+  DA  +LR   E+ + PD  +++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 304 PLISA-----------------------------------YCKDGRLDLAIEFLDYMISD 328
            LISA                                   +CK  R D A    D M S 
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PD+V +NTI+  +C+    D+ +++  ++S  G   N ++YNT+        +   A
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM+S G+ PD IT N L+   C +  ++EA+ L   ++ ++     ++YNIII G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            CK  +++E+ ++  ++   G +P+  TY ++I   G+ G  A    +++A V  H +  
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS--GFCGKSA----ISDANVLFHKMKD 600

Query: 509 DTFKRLNRTFPLL 521
           +  +  N T+  L
Sbjct: 601 NGHEPDNSTYNTL 613



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 23/431 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      G+  E+   +  MV  G   DVV    ++    +   +  A+ ++  +E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + + +PDV  Y+A+I   CK      A  +   +  +G +P+V TYN MI   CS G   
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++     P V+T+  LI A++ EG+  +A KL DEM                
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---------------- 392

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               R   PD ++YN ++       ++++ + +   M S    P+VVT++ +I   CR  
Sbjct: 393 --LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++ + +LR    +GL  +  +Y+ LI  +C+   L+ A +    MIS G  PD +  N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FC+N   ++ALE+FE +       +  +YN +   +        A  +   +   
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EPD  TYN +IS  C    + +A  L   M+     P   +YN +I G  K   I++S
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 459 IEVLAAMFEKG 469
           IE+++ M   G
Sbjct: 627 IELISEMRSNG 637



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 19/335 (5%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R +E R    ++ S+N+L++   +  K         ++   G +P+VVT++ L+ 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 273 SLCRDGKTEDA---------------VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            LC + +  +A               V +     E GLTP   +++ LI+  C +GR+  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   ++ M+  G   D+V Y TI+   CK G+   AL +  K+ +    P+V  Y+ +  
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L   G    A  + SEML KGI P+  TYN +I   C  G   +A  LL DM      P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V+++N +I    K  ++ E+ ++   M  +   P+  TY  +I G        +A  + 
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 498 NALVSMHAISRDT----FKRLNRTFPLLDVYKEIS 528
           + + S   ++ +T    + R  R    + + +EIS
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    +  K DE+     S+  +G +PDV     +I  F  +   + A  
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +   ++  G EPD   YN LI G  KA +I+ + +++  +RS GFS D  T   M+  L 
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLI 652

Query: 153 SRGMIESAF 161
           + G ++ +F
Sbjct: 653 TDGRLDKSF 661


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 233/477 (48%), Gaps = 19/477 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    R GK D +++F+  M+  G K  V     LI    +    + AV    E+++K 
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P V +Y +LISG+C   ++  A ++   +  +G +P+  T+  +I +L     +  AF
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++FD++L  N  P  +TY ++I+    EG T KA +LL++M                  +
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A +F+  L     + + + Y+ LL      G+  +   +  EM+ RG++ ++
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y++LI    ++  T     +L+   ++ L PD   Y  +I  Y K G +  A    D 
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI +GC P+IV Y T++   CK G  D+A  +++++      PN  +Y      L   G 
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A+ + ++ML KG+  + ++YN L+   C+ G V+EA  LL +M      P  I+Y+ 
Sbjct: 767 MEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           II   C+   ++ +IE    M  KG KP+   Y  LI G    G   +A EL + ++
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMI 882



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 218/450 (48%), Gaps = 19/450 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           + D  L     +++ G +PD+ +   +I+ F + +   KA  +++ +E   + +V  YN 
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES-SDLNVVVYNV 266

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI G CK  ++  A ++ + L  +G +   VTY  ++  LC     E    V D+++   
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             PT    + L++                  G+ +KG V  AF  V  ++  G  P +  
Sbjct: 327 FVPTEAALSSLVE------------------GLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+ +L   GK++E E L  EM  +GL  N VTYSILI S CR GK + A+  L    
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+    Y Y+ LI+ +CK G L  A+ F D MI  G  P +V+Y ++++ +C  G   
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A  ++ +++  G  PN  ++ T+ SAL+ +     A  +  EML + + P+E+TYN +I
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C++G   +A  LL  M      P   +Y  +I   C T R+ E+ + +  +  +  K
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
            NE  Y  L+ G    G   +A+ +   +V
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMV 638



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 218/457 (47%), Gaps = 19/457 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GKFDE+    + M   G   + V  + LI  F +  K + A+  +  +   G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +  V+ YN+LI+G CK   +  A    D +  +G  P VV+Y  +I   C++G +  AF
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +++ ++      P   T+T LI A     +   A +L DEM                 G 
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G   +AF+ +  +  +G  PD  +Y  L+ +L + G+  E +K + ++     + N 
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + YS L+   C++G+  DA+ V R   ++G+  D   Y  LI    K+         L  
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M      PD V Y +++  + K G+  +A  I++ + D GC PN+ +Y T+ + L  +G 
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  +  EML     P+ +TY   +  L R+G +++AV L  DM       TV SYNI
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTV-SYNI 790

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           ++ GFCK  R+ E+ ++L  M +    P+  TY  +I
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 238/532 (44%), Gaps = 18/532 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E +           E  +  L+    +  +F+     ++ M+  G  P     +
Sbjct: 276 RVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALS 335

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L++   ++ K   A  ++  ++K G  P +F YNALI+  CK  + + A  +   +  +
Sbjct: 336 SLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK 395

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   + VTY+I+I S C RG +++A     +++    K TV  Y  LI      G    A
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAA 455

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +   DEM                 G C KG + +AF+    +  +G  P+  ++  L+  
Sbjct: 456 VSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L    +  +  +L  EM+ + + PN VTY+++I   C++G T  A ++L    +KGL PD
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            Y+Y PLIS+ C  GR+  A +F+D +  +    + + Y+ +L  +CK G    AL +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++   G   ++  Y  +        D     G++  M  + + PD++ Y S+I    + G
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            V +A G+   M      P +++Y  +I   CK   ++++  +   M      PN  TY 
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHL 530
             ++ +   G   +A++L N ++     +  ++  L R F  L   +E + L
Sbjct: 756 CFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKL 807



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 188/424 (44%), Gaps = 54/424 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI      GK  E+      M   G  P+    T LI   F+  +   A R+  E+L
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   YN +I G CK      A ++L+++  +G  PD  TY  +I SLCS G + 
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 159 SAFKVFDQLLRDN---------------------------CKPTV--------ITYTILI 183
            A K  D L R++                           C+  V        + Y +LI
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
             T+ E  T     LL  M                 G  K G V +AF     +   GC 
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++++Y  L+  L   G  ++ E L  EM+     PN VTY   +  L R+G  E AV  
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ- 772

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L     KGL  +  SY+ L+  +CK GR++ A + LD MI +   PD + Y+TI+   C+
Sbjct: 773 LHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN D A+E ++ + + G  P+  +YN +      +G+  +A  +  +M+ +G++P++ T
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892

Query: 407 YNSL 410
           + SL
Sbjct: 893 HKSL 896



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 180/425 (42%), Gaps = 56/425 (13%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + QE++   +V +  ++ +    P V     +++G  K  ++++   +   + S G
Sbjct: 164 LIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMG 223

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PD+  Y  +I S C       A ++  ++  ++    V+ Y +LI             
Sbjct: 224 IRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIH------------ 269

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   V +A +    L  +G     ++Y  L+  L  + ++E G  +M EMI
Sbjct: 270 ------GLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI 323

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P     S L+  L R GK  DA D++   K+ G                      
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG---------------------- 361

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                         +P +  YN ++ + CK+G  D+A  +F+++ + G   N  +Y+ + 
Sbjct: 362 -------------AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILI 408

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            +    G    A+  + +M+  GI+     YNSLI+  C+ G +  AV    +M     +
Sbjct: 409 DSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLK 468

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           PTV+SY  +I G+C   +++E+  +   M  KG  PN  T+  LI  +       +A  L
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRL 528

Query: 497 ANALV 501
            + ++
Sbjct: 529 FDEML 533


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 232/475 (48%), Gaps = 45/475 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+    +   D +    + M   GC+P+      L++ F +  ++ +A+  ++  +
Sbjct: 154 FNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDG-K 212

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
             G  +   YN L+S FCK +  + A K+++R+  +G  PDVVT+N  I +LC  G +  
Sbjct: 213 MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFE 272

Query: 160 AFKVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           A ++F  +  D      KP V+T+ ++++                  G C++GM+ +A  
Sbjct: 273 ASRIFRDMQMDGELGLPKPNVVTFNLMLK------------------GFCQEGMMEEARS 314

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V +++  G    + SYN  L  LL  GK  EG  ++ EM+  G+EPN+ +Y+I++  LC
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R+    DA  ++      G+ PD  +Y  L+  YC  G++  A   L+ MI  GC P+  
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             NT+L +  K G   +A E+ +K+++     +  + N + + L  +G+  +A  ++SEM
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 396 LSKGIE----------------------PDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            + G                        PD ITY +LI+ LC+ G ++EA    ++M + 
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
              P  ++Y+  +L FCK  +I+ ++ VL  M   GC     TY  LI G+G  G
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKG 609



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 227/489 (46%), Gaps = 47/489 (9%)

Query: 49  RAGKFDESLYFIESMVANG----CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE- 103
           RAGK  E+      M  +G     KP+VV    ++K F QE    +A  ++E ++K G  
Sbjct: 266 RAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNF 325

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
             + +YN  + G  +  ++     VLD +   G  P++ +YNI++  LC   M+  A ++
Sbjct: 326 VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRL 385

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            D ++ +   P  +TYT L+                   G C KG V +A   +  +  +
Sbjct: 386 MDLMVSNGVYPDTVTYTTLLH------------------GYCSKGKVFEAKAILNEMIRK 427

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC P+  + N LL +L   G+  E E+++ +M  +  + + VT +I+++ LCR+G+ E A
Sbjct: 428 GCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487

Query: 284 VDVLRAAKEKGLT----------------------PDAYSYDPLISAYCKDGRLDLAIEF 321
            +V+      G                        PD  +Y  LI+  CK G+L+ A + 
Sbjct: 488 SEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKK 547

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M++    PD V Y+T +  FCK G    AL + + +   GC   + +YN++   L S
Sbjct: 548 FIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGS 607

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVI 440
            G      G++ EM  +GI PD  TYN++I+CLC  G   +A  LL +M +     P V 
Sbjct: 608 KGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVS 667

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           S+ I+I  FCK+     + E+        C   E  Y L+   +  GG  ++A EL  A 
Sbjct: 668 SFKILIKAFCKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSDAKELFEAS 726

Query: 501 VSMHAISRD 509
           +    +S++
Sbjct: 727 LERSLLSKN 735



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 196/417 (47%), Gaps = 45/417 (10%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ + +N LI   C++N ++ A ++ D++  +G  P+  T  I++   C  G  + A + 
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            D  +  N    V  Y  L+ +   +   D+A KL++ M                  +C+
Sbjct: 209 VDGKMGGNVNRVV--YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCR 266

Query: 207 KGMVGQAFQFVRSLESRG----CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            G V +A +  R ++  G     +P+V+++N++L+     G  EE   L+  M   G   
Sbjct: 267 AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFV 326

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ +Y+  +  L R+GK  +   VL    E G+ P+ YSY+ ++   C++  +  A   +
Sbjct: 327 SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+S+G  PD V Y T+L  +C  G   +A  I  ++   GC PN  + NT+ ++LW  
Sbjct: 387 DLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKE 446

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES---------- 432
           G K  A  M+ +M  K  + D +T N +++ LCR+G +++A  ++ +M +          
Sbjct: 447 GRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKEN 506

Query: 433 ------------TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
                       +   P VI+Y  +I G CK  ++ E+ +    M  K   P+  TY
Sbjct: 507 PVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTY 563



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 179/405 (44%), Gaps = 78/405 (19%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVMEILEKYGEPDVFAY 109
           GK  E+   +  M+  GC P+   C  L+   ++E RKS     + ++ EK  + D    
Sbjct: 412 GKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTC 471

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFS----------------------PDVVTYNIM 147
           N +++G C+  ++E A++V+  + + G +                      PDV+TY  +
Sbjct: 472 NIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTL 531

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I  LC  G +E A K F +++  N  P  +TY   +                  +  CK+
Sbjct: 532 INGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFV------------------LNFCKQ 573

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +  A + ++ +E  GC   + +YN L+  L + G+  E   LM EM  RG+ P++ TY
Sbjct: 574 GKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTY 633

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGL-TPDAYSYDPLISAYCKDGRLDLAIEFLDY-- 324
           + +I+ LC  GKT+DA  +L    +KG+ +P+  S+  LI A+CK G   +A E  D   
Sbjct: 634 NNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693

Query: 325 ----------------MISDGCLPDIVN----------------YNTILAAFCKNGNADQ 352
                           +++ G L D                   Y  ++   CK+G  D 
Sbjct: 694 SVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDD 753

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA--LGMISEM 395
           A  + +KL D G   + SS+  +   L   G+K +A  LG I E+
Sbjct: 754 AHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMEL 798



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 140/256 (54%), Gaps = 6/256 (2%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L T+MI  G+ P   T+++LI SLC     + A ++     EKG  P+ ++   L+  +C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + GR   A+EF+D  +  G   + V YNT++++FCK    D+A ++ E++++ G  P+V 
Sbjct: 198 RAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKG----IEPDEITYNSLISCLCRDGMVDEAVGL 426
           ++N+  SAL  +G    A  +  +M   G     +P+ +T+N ++   C++GM++EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           +  M+      ++ SYN  +LG  +  ++ E   VL  M E G +PN  +Y ++++G+  
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 487 GGWRAEAMELANALVS 502
                +A  L + +VS
Sbjct: 376 NHMMLDARRLMDLMVS 391


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 239/537 (44%), Gaps = 89/537 (16%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M   G  PDV   + LI+ + + R    A +V+E + + G   +V  YN LI G C+A  
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           IE A      +   G  PD  TY  +I  LC RG  + A  + D++      P V+ Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG------------- 211
           LI   M +G  D+A K++ EM                 G+CK G +G             
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 212 ----------------------QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                                 +AF  +  +   G  P+V +Y++++  L  +G+ E   
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            L+ +MI+ GL+PN   Y+ LIS  CR+G    A + L+    + LTPD Y Y+ LI   
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN- 368
              G++D AIE+ D M+  G  P+   Y  ++  +   GN ++A ++  ++ + G  PN 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 369 ------------------VSS----------------YNTMFSALWSSGDKIRALGMISE 394
                             VSS                Y  +   L SSG    A+ ++S 
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +   G+ PD + Y SLIS  C+   +++AVGLL +M      P +  YN +I GFCK+  
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           I+ +  +  ++  KG  PN  TY  LI+G    G   +A++L N +++   ++ D F
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT-EGVAPDAF 769



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 240/524 (45%), Gaps = 54/524 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G  DE+   ++ M A G +P+ +    LI+   +  +  +A R+++ + 
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G   D   YN +I G  + +  E A  +L+ +R  G SP+V TY+I+I  LC  G  E
Sbjct: 411 KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + +Q++ D  KP    Y  LI     EG    A + L +M                
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+   G + +A ++   +  +G QP+  +Y  L+      G  E+ E+L+ +M++ GL 
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590

Query: 262 PNVVTYS-----------------------------------ILISSLCRDGKTEDAVDV 286
           PN   Y+                                   I+I +L   G  + AV V
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L   ++ GL PD+  Y  LIS +CK   ++ A+  LD M   G  P I  YN ++  FCK
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCK 710

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           + +   A  IF  +   G PPN  +Y T+      +GD   A+ + +EML++G+ PD   
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFV 770

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L +     G + +A+ +  +M + R    + S+N ++ GFCK  ++ E+++ L  M 
Sbjct: 771 YSVLAAGCSNSGDLQQALFITEEMIA-RGYAIISSFNTLVHGFCKRGKLQETVKFLHVMM 829

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           +K   P+  T   ++ G+G  G  +EA  +   L   +A  RDT
Sbjct: 830 DKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDT 873



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 229/488 (46%), Gaps = 18/488 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ D++   ++ M   G  P+VV+ + LI  F ++  +++A ++++ +   G +P+  
Sbjct: 325 KRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKI 384

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G CK  ++  A+++L ++   G+  D +TYN++I     +   E AF + +++
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +    P V TY+I+I      G++++A  LL++M                 G C++G  
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSF 504

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + ++ +      PD+  YN L+  L N+GK +E  +   EM+ +G +PN  TY  L
Sbjct: 505 SLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGL 564

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I      G  E A  +L      GL P+ + Y  ++  Y K   L+     L  M+  G 
Sbjct: 565 IHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGL 624

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD   Y  ++     +G+   A+ +   +   G  P+   Y ++ S    + D  +A+G
Sbjct: 625 MPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVG 684

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  KGIEP    YN+LI   C+   +  A  +   +      P  ++Y  +I G+C
Sbjct: 685 LLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYC 744

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I ++I++   M  +G  P+   Y +L  G    G   +A+ +   +++       +
Sbjct: 745 KAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS 804

Query: 511 FKRLNRTF 518
           F  L   F
Sbjct: 805 FNTLVHGF 812



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 186/376 (49%), Gaps = 18/376 (4%)

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           KV   +   G SPDV TY+ +I + C    +ESA KV +++    C   V+TY  LI   
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIG-- 286

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+C+ G + +AF + + +E  G  PD  +Y  ++  L   G+ +
Sbjct: 287 ----------------GLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPD 330

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           + + L+ EM   GL PNVV YS LI    R G  ++A  +++     G+ P+  +YD LI
Sbjct: 331 QAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLI 390

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK GR+  A   L  M   G + D + YN ++    +  N ++A  +  ++   G  
Sbjct: 391 RGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV +Y+ + + L   G+  RA G++ +M++ G++P+   Y  LIS  CR+G    A   
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACET 510

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L  M      P +  YN +I+G     +++E+IE    M EKG +PN+ TY  LI G   
Sbjct: 511 LKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570

Query: 487 GGWRAEAMELANALVS 502
            G   +A +L + +++
Sbjct: 571 AGNLEKAEQLLHQMLN 586



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 179/388 (46%), Gaps = 37/388 (9%)

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT---------- 180
           RL     +PD   +  +  SLC+ G+   A  + DQ++R    P ++  +          
Sbjct: 112 RLAPSAPAPDAFAH--LAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQ 169

Query: 181 --------ILIQATMLEGQTDKAMK---LLDEMGM-----CKKGMVGQAFQF-------- 216
                   +L+      G+     +   L+ ++G+     C  G++    +         
Sbjct: 170 GRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWK 229

Query: 217 VRS-LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           VR  +E  G  PDV +Y+ L+     +   E  +K++ EM   G   NVVTY+ LI  LC
Sbjct: 230 VRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G  E+A    +  ++ GL PD ++Y  +I+  CK GR D A   LD M   G +P++V
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+T++  F + GNAD+A +I +++S  G  PN  +Y+ +   L   G   RA  ++ +M
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
              G   D +TYN +I    R    +EA  LL +M      P V +Y+III G C+    
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGES 469

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +  +L  M   G KPN   Y  LI G
Sbjct: 470 ERASGLLEQMIADGLKPNAFVYAPLISG 497



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 40/328 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + ++++  F++   ++    ++SM+  G  PD  +   +I           AV V+ ++E
Sbjct: 596 YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE 655

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   Y +LISGFCKA  +E A  +LD +  +G  P +  YN +I   C    I 
Sbjct: 656 KNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDIS 715

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F+ ++     P  +TYT LI      G    A+ L +EM                
Sbjct: 716 HARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G    G + QA      + +RG    + S+N L+      GK +E  K +  M+ + + 
Sbjct: 776 AGCSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIV 834

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEK--------------------GLTPDAYS 301
           P+++T   ++  L   GK  +A  +    ++K                    GL P    
Sbjct: 835 PSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVI 894

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++ +I ++CK G LD A+   D +++ G
Sbjct: 895 HN-MIQSHCKQGYLDKALMLHDALVAKG 921


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 234/456 (51%), Gaps = 23/456 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   ++  +  M   G +P++++C   I       K  KA+R +E ++  G  P+V 
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C   Q+E A +++  +  +G  PD V+Y  ++G LC    I+    + +++
Sbjct: 243 TYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM 302

Query: 168 LRDN-CKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG-------MCKKGM 209
           ++DN   P  +TY  L+      G  D+A++ L          D++G        C +G 
Sbjct: 303 VKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGR 362

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + ++GC PDV++Y  ++  L  +GK EE +K++ +M   G +PN V+Y+ 
Sbjct: 363 MDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC+ G + +A +++  ++E   TP+A +Y  ++    ++G+L  A + +  M++ G
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C     ++A +  E+  + GC  N  ++ T+      S +   AL
Sbjct: 483 FFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTAL 542

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +T+ ++I  L + G ++EA    + M      PT ++Y  +I  +
Sbjct: 543 SLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQY 602

Query: 450 CKTRRINESIEVLAAMFEKG-CKPNETTYVLLIEGI 484
           CK  R+ E I++L  M  +  C+   T Y  +IE +
Sbjct: 603 CKMGRVEELIKLLGKMLSRSKCR---TAYNQVIEKL 635



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 192/381 (50%), Gaps = 21/381 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ FA+  ++  + +A ++  A +VL  ++  G  P+++  N  I  L     +E A + 
Sbjct: 171 PEAFAH--VMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRF 228

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            +++      P V+TY  LI+      Q + AM+L+ EM                    +
Sbjct: 229 LERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPF------------------K 270

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTED 282
           GC PD +SY  ++  L    + +E   LM +M+    L P+ VTY+ L+  L + G  ++
Sbjct: 271 GCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADE 330

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++ LR  +E+G   D   Y  +++++C  GR+D A E ++ MI+ GC PD+V Y  ++ 
Sbjct: 331 ALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVN 390

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK G  ++A ++ +++   GC PN  SY  + + L   G+ + A  M++        P
Sbjct: 391 GLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTP 450

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITY+ ++  L R+G + EA  ++ +M +  F PT +  N++I   C  +++NE+ + +
Sbjct: 451 NAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFM 510

Query: 463 AAMFEKGCKPNETTYVLLIEG 483
                +GC  N   +  +I G
Sbjct: 511 EECLNRGCAVNAVNFTTVIHG 531



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 214/457 (46%), Gaps = 22/457 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + + ++  I  M   GC PD V    ++    Q+++  +   +ME + K  
Sbjct: 247 LIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDN 306

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           +  PD   YN L+    K    + A + L     RGF  D V Y+ ++ S C +G ++ A
Sbjct: 307 KLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRA 366

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ ++++   C P V+TYT ++                   G+CK G V +A + ++ +
Sbjct: 367 KEIVNEMITKGCSPDVVTYTAVVN------------------GLCKVGKVEEAKKMLQQM 408

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC+P+ +SY  LL  L   G   E  ++M         PN +TYS+++  L R+GK 
Sbjct: 409 YKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKL 468

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A DV+R    KG  P     + LI + C + +++ A +F++  ++ GC  + VN+ T+
Sbjct: 469 SEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTV 528

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  FC++ N D AL + + +      P+  ++  +  AL   G    A     +ML KG+
Sbjct: 529 IHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGL 588

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P  +TY ++I   C+ G V+E + LL  M S     T  +YN +I   C       + +
Sbjct: 589 DPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRT--AYNQVIEKLCNFGNPEAADK 646

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           V+  +     + +  T  +L+E     G    A ++A
Sbjct: 647 VVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVA 683



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 201/408 (49%), Gaps = 18/408 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A++V+ +++K G EP++   N  I     AN++E A + L+R++  G +P+VVTYN
Sbjct: 186 KLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYN 245

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    +E A ++  ++    C P  ++Y  ++     + +  +   L+++M   
Sbjct: 246 CLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM--- 302

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         ++     PD ++YN L+  L   G  +E  + + E   RG + + V
Sbjct: 303 --------------VKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKV 348

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS +++S C  G+ + A +++     KG +PD  +Y  +++  CK G+++ A + L  M
Sbjct: 349 GYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM 408

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   C++GN+ +A E+     +    PN  +Y+ +   L   G  
Sbjct: 409 YKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKL 468

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EML+KG  P  +  N LI  LC +  ++EA   + +  +       +++  +
Sbjct: 469 SEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTV 528

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           I GFC++  I+ ++ +L  M+     P+  T+  +I+ +G  G   EA
Sbjct: 529 IHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEA 576



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 192/429 (44%), Gaps = 52/429 (12%)

Query: 52  KFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           +  E    +E MV  N   PD V    L+    +   +++A+  +   E+ G + D   Y
Sbjct: 291 RIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGY 350

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           +A+++ FC   +++ A ++++ + ++G SPDVVTY  ++  LC  G +E A K+  Q+ +
Sbjct: 351 SAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYK 410

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVGQ 212
             CKP  ++YT L+      G + +A ++++                   G+ ++G + +
Sbjct: 411 HGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSE 470

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   VR + ++G  P  +  N+L+++L    K  E +K M E ++RG   N V ++ +I 
Sbjct: 471 ACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIH 530

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+    + A+ +L         PDA ++  +I A  K GR++ A  +   M+  G  P
Sbjct: 531 GFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDP 590

Query: 333 DIVNYNTILAAFCKNGNADQAL-----------------EIFEKLSDVGCPP-------- 367
             V Y  ++  +CK G  ++ +                 ++ EKL + G P         
Sbjct: 591 TPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVGL 650

Query: 368 --------NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
                   + ++ + +  +  S G  + A  +   M  + + PD      L   L  +G 
Sbjct: 651 VLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGK 710

Query: 420 VDEAVGLLV 428
           ++EA  L++
Sbjct: 711 LEEADNLML 719



 Score = 42.7 bits (99), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G+ +E+  +   M+  G  P  V    +I ++ +  +  + ++++  + 
Sbjct: 560 FTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKML 619

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
              +    AYN +I   C     E A+KV+  +       D  T ++++ S  S+G+  S
Sbjct: 620 SRSKCRT-AYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLS 678

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           A+KV  ++   N  P +     L +  +LEG+ ++A  L+
Sbjct: 679 AYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLM 718


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 239/457 (52%), Gaps = 26/457 (5%)

Query: 33  FDVKET--QFMKLIKRSFRAGKFDESLYFIESMV-ANGCK--PDVVMCTKLIKKFFQERK 87
           F+ K T   F  ++    + G F  +L F   ++ A G    P+V+    +IK   +   
Sbjct: 155 FECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGL 214

Query: 88  SNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            + A++V  ++  +  EPDV+ Y  L+ G CKA++I+ A  +LD ++  G  P  VT+N+
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I  LC +G +  A K+ D +    C P  +TY  LI    L+G+ +KA+ LLD M    
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM---- 330

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                          S  C P+V++Y  ++  L+  G+  +G  ++  M  RG   N   
Sbjct: 331 --------------VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS LIS L ++GK+++A+ + +    KG   +   Y  +I   C+DG+ D A+E L  M 
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + GC P+    ++++  F + GN+ +A+E+++ ++      N   Y+ +   L   G   
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNI 444
            A+ + ++ML KG +PD + Y+S+I+ L   G+V++A+ L  +M  +    +P V++YNI
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           ++   CK   I+ +I++L +M ++GC P+  T  + +
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL 593



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 201/450 (44%), Gaps = 56/450 (12%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + +LI+ +      +   KVLDR++          + ++  +     + E A  +FD++
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------GMCK 206
             +  CK T  ++  ++   + EG   +A++  + +                     MCK
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G+V  A Q  R +  R C+PDV +Y  L+  L    + +E   L+ EM   G  P+ VT
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           +++LI+ LC+ G    A  ++     KG  P+  +Y+ LI   C  G+L+ AI  LD M+
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S  C+P++V Y TI+    K G A     +   + + G   N   Y+T+ S L+  G   
Sbjct: 332 SSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQ 391

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV------------------ 428
            A+ +  EM  KG E + I Y+++I  LCRDG  D+AV +L                   
Sbjct: 392 EAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLM 451

Query: 429 -----------------DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                            DM    F    + Y+++I G CK  ++ E++ V   M  KGCK
Sbjct: 452 KGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCK 511

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P+   Y  +I G+   G   +AM+L N ++
Sbjct: 512 PDVVAYSSMINGLSIAGLVEDAMQLYNEML 541



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 149/301 (49%), Gaps = 20/301 (6%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           +S +A+   N  L      E  +  LI      GK ++++  ++ MV++ C P+VV    
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    ++ ++     V+ ++E+ G   + + Y+ LISG  K  + + A  +   +  +G
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           +  + + Y+ +I  LC  G  + A +V  ++    C P   T + L++     G + +A+
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAV 464

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           ++  +M                 G+CK G V +A      +  +GC+PDV++Y+ ++  L
Sbjct: 465 EVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524

Query: 240 LNMGKWEEGEKLMTEMISRGL--EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
              G  E+  +L  EM+ +G   +P+VVTY+IL+++LC+      A+D+L +  ++G  P
Sbjct: 525 SIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDP 584

Query: 298 D 298
           D
Sbjct: 585 D 585



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 17/241 (7%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  +  LI   F+ GK  E+++  + M   G + + ++ + +I    ++ K + AV V
Sbjct: 372 VNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEV 431

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + E+  K   P+ +  ++L+ GF +A     A +V   +    F+ + V Y+++I  LC 
Sbjct: 432 LSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCK 491

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G ++ A  V+ Q+L   CKP V+ Y+ +I    + G  + AM+L +EM +C        
Sbjct: 492 DGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM-LC-------- 542

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                  +    QPDV++YN+LL TL           L+  M+ RG +P++VT +I +  
Sbjct: 543 -------QGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRM 595

Query: 274 L 274
           L
Sbjct: 596 L 596



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKL--- 360
           +  AY K    + A++  D M  +  C     ++N++L    + G   +ALE +  +   
Sbjct: 131 IFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGA 190

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
             V   PNV ++N +  A+   G    A+ +  +M  +  EPD  TY +L+  LC+   +
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEAV LL +M+     P+ +++N++I G CK   ++ + +++  MF KGC PNE TY  L
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I G+   G   +A+ L + +VS
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVS 332



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 43/195 (22%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG------ 102
           R GK D+++  +  M   GC P+   C+ L+K FF+   S++AV V + + K+       
Sbjct: 421 RDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEV 480

Query: 103 ------------------------------EPDVFAYNALISGFCKANQIELANKVLDRL 132
                                         +PDV AY+++I+G   A  +E A ++ + +
Sbjct: 481 CYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM 540

Query: 133 RSRG--FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
             +G    PDVVTYNI++ +LC +  I  A  + + +L   C P ++T TI ++  ML  
Sbjct: 541 LCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR--MLRE 598

Query: 191 QTDKAM---KLLDEM 202
           + D      + LDE+
Sbjct: 599 KLDPPQDGREFLDEL 613


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 215/450 (47%), Gaps = 19/450 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKV 128
           D  +CT L+    +     +A RV E +  E+   P+   Y+ LI G C+A ++E A ++
Sbjct: 162 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQL 221

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +  +G  P   TY ++I + C  GM + A K+ D++    C P V TYTILI     
Sbjct: 222 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 281

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           EG+ ++A  +  +M                 G CK+G V  AFQ +  +E   C+P++ +
Sbjct: 282 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 341

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+  L  + K  +   L+  ++  GL P+ VTY+IL+   C++G+   A ++  +  
Sbjct: 342 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 401

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             GL PD +++  LI   CK GRL+ A   L  M+  G   D V +  ++   CK G A 
Sbjct: 402 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 461

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
               +FE + +  C     ++N    AL        A  M+ +M+  G+ P  +T+  LI
Sbjct: 462 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 521

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR G    ++ +L  M+     P V +Y III G C   R+ E+  +L +M   G  
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY +L++     G    A ++ + +V
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 611



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 222/468 (47%), Gaps = 28/468 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ++S     RPN+           +  LI     AG+ +E+    + MV  GC+P     T
Sbjct: 188 KMSKEESCRPNS---------VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LIK       ++KA++++ E+  K   P+V  Y  LI   C+  +IE AN V  ++   
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P ++T+N +I   C  G + SAF++   + + NCKP + TY  L++           
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME----------- 347

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C+     +AF  +R +   G  PD ++YN+L+      G+      +   M
Sbjct: 348 -------GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S GLEP+  T++ LI  LC+ G+ E A  +L +  +KG++ D  ++  LI  +CK G+ 
Sbjct: 401 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 460

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                  + M+ + CL     +N  L A  K+   ++A  +  K+   G  P+V ++  +
Sbjct: 461 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 +G+   +L M+  M   G  P+  TY  +I+ LC +G V+EA  +L  M S   
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 580

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P   +Y +++    K  R++ + ++++ M + GC+PN   Y  L+ G
Sbjct: 581 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 54/424 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +++  CK   ++ A     ++   GF  D      ++ + C R  +  AF+VF+++ 
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190

Query: 169 RD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           ++ +C+P  +TY+ILI                   G+C+ G + +AFQ  + +  +GCQP
Sbjct: 191 KEESCRPNSVTYSILIH------------------GLCEAGRLEEAFQLKQEMVEKGCQP 232

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +L++   ++G  ++  K++ EM ++   PNV TY+ILI  LCR+GK E+A  V 
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM---------------------- 325
           R   + GL P   +++ LI+ YCK+G +  A + L  M                      
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352

Query: 326 -------------ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
                        + +G LPD V YN ++  FCK G  + A  IF  ++  G  P+  ++
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 412

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             +   L   G   +A G++  M+ KGI  DE+T+ +LI   C+ G   +   L  +M  
Sbjct: 413 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 472

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
            R   T  ++N  +    K  ++NE+  +L  M + G  P+  T+ +LIEG    G  A 
Sbjct: 473 NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 532

Query: 493 AMEL 496
           ++++
Sbjct: 533 SLKM 536



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 221/471 (46%), Gaps = 32/471 (6%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H          +  LI R  R GK +E+      M+ +G  P ++    LI  + +E
Sbjct: 267 PNVH---------TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 317

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
                A +++ ++EK   +P++  YN L+ G C+ ++   A  +L R+   G  PD VTY
Sbjct: 318 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 377

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NI++   C  G +  AF +F+ +     +P   T+T LI      G+ ++A  +L  M  
Sbjct: 378 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 437

Query: 203 ---------------GMCKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                          G CK G      F F   +E+R C     ++N  L  L    K  
Sbjct: 438 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR-CLTTAHTFNCFLDALGKDYKLN 496

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   ++ +M+  GL P+VVT++ILI   CR G+T  ++ +L   K+ G +P+ Y+Y  +I
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  C +GR++ A   L  M S G  P+   Y  ++ A  K G  D+A +I   +   GC 
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616

Query: 367 PNVSSYNTMFSALWSSGDKI--RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           PN   Y+ + S    S   I  RAL    ++ ++ +  +E   N L S + R   VD A+
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 676

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
            +  +++     PT   YN +++G CK  RI E+ ++   M + G  P++ 
Sbjct: 677 KIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 726



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 11/393 (2%)

Query: 118 KANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           ++N +EL  +    + R   +  D+     ++G L SR +   A K    L+++ C+ + 
Sbjct: 13  QSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQE-CEDSE 71

Query: 177 ITYTILIQATMLEGQTDKAMKL----LDEMGMC--KKGMVGQAFQFVRSLESRGCQPDVI 230
                L+ A  L+G T+   +L       + MC  K  M   AF   R + + G     I
Sbjct: 72  NGVVKLMGA--LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 129

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RA 289
            Y  ++  L   G  +  E    +++  G   +    + L+ + CR     +A  V  + 
Sbjct: 130 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 189

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
           +KE+   P++ +Y  LI   C+ GRL+ A +    M+  GC P    Y  ++ A C  G 
Sbjct: 190 SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 249

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+++ ++++   C PNV +Y  +   L   G    A G+  +ML  G+ P  IT+N+
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C++G V  A  LL  ME    +P + +YN ++ G C+  +  ++  +L  + + G
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+  TY +L++G    G    A  + N++ S
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 183/449 (40%), Gaps = 92/449 (20%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K  ++   +  +V NG  PD V    L+  F +E + N A  +   +   G EPD F
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + ALI G CK  ++E AN +L  +  +G S D VT+  +I   C  G  +    +F+ +
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 168 LRDNC-----------------------------------KPTVITYTILIQATMLEGQT 192
           + + C                                    P+V+T+TILI+     G+T
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             ++K+L+ M                 G+C  G V +A   + S+ S G  P+  +Y +L
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 590

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL--------------------- 274
           ++  +  G+ +   ++++ M+  G +PN   YS L+S                       
Sbjct: 591 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 650

Query: 275 ----------CRDGKTEDAVDVLRAAK-----EKGLTPDAYSYDPLISAYCKDGRLDLAI 319
                     C        +DV  A K     +K   P    Y+ L+   CK+GR+  A 
Sbjct: 651 SLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEAD 710

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M+  G  PD    ++I+  +CK    D  LE  + + D    P+ +SY  +   L
Sbjct: 711 QLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGL 769

Query: 380 WSSGDKIRALGMISEMLSK-GIEPD-EIT 406
            + G    A  ++S+++   GIE + E+T
Sbjct: 770 RNEGRVQEAQKLVSDLVRHTGIEEEVEVT 798



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 56/361 (15%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  LI    + GK  +  +  E+MV N C          +    ++ K N+A  ++ 
Sbjct: 444 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 503

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + KYG  P V  +  LI G C+A +  L+ K+L+R++  G SP+V TY I+I  LC+ G
Sbjct: 504 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 563

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +E A  +   +      P   TY +L++A +  G+ D+A                  FQ
Sbjct: 564 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA------------------FQ 605

Query: 216 FVRSLESRGCQPDVISYNMLL------------RTLLNMGKW--------EEGEKLMTEM 255
            V ++   GCQP+   Y+ LL            R L + G          E     ++  
Sbjct: 606 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 665

Query: 256 ISRGLE----------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           + R ++                P    Y+ L+  LC++G+  +A  + +   + GL PD 
Sbjct: 666 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 725

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +   +I  YCK  + D  +EF+  ++ +  +P   +Y  ++      G   +A ++   
Sbjct: 726 -AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 784

Query: 360 L 360
           L
Sbjct: 785 L 785


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 228/504 (45%), Gaps = 55/504 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F  G+  ++      M   G KPDVV    +I    + R  +KA  V+  + 
Sbjct: 268 YSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +PD   Y+ +I G+    +++ A K+   ++ RG  P++VT N  + SLC  G  +
Sbjct: 328 TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSK 387

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A + FD +     KP + +Y  L+     EG     + L + M                
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K+GMV  A      ++ +G  PDV++Y+ ++ T   MG+  +  +   +M++RG++
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 262 PN------------------------------------VVTYSILISSLCRDGKTEDAVD 285
           PN                                    +V +S +I+SLC+DG+  DA D
Sbjct: 508 PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHD 567

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +   A + G  P   +++ LI  YC  G++D A + LD M   G  PDIV YNT+L  + 
Sbjct: 568 IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           KNG  +  L +F ++   G  PN  +Y  M + L+ +G  + A     EM+  G      
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y  ++  LCR+   DEA+ L   + +   + ++   N +I    K +R  E+ E+ A +
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747

Query: 466 FEKGCKPNETTY-VLLIEGIGYGG 488
              G  PNE+TY V++I  +  GG
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGG 771



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 218/429 (50%), Gaps = 22/429 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISG 115
            +  M   GC P+ V  + ++K       S +A+ +++++ K G    PDV AY+ +I G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F    +   A  +   +  +G  PDVVTYN++I +LC    ++ A  V  Q+  D  +P 
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            +TY+ +I      G+  +A K+  EM                  + RG  P++++ N  
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREM------------------KKRGLIPNIVTCNSF 376

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L +L   G+ +E  +    M ++G +P++ +Y  L+     +G   D + +  + K  G+
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             + + +  LI AY K G +D A+     M   G  PD+V Y+T+++ F + G    A+E
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCL 414
            F ++   G  PN + Y+++       G  ++A  ++SEM++KGI  PD + ++S+I+ L
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+DG V +A  +         RP VI++N +I G+C   +++++ ++L AM   G +P+ 
Sbjct: 557 CKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 475 TTYVLLIEG 483
            TY  L++G
Sbjct: 617 VTYNTLLDG 625



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 228/472 (48%), Gaps = 21/472 (4%)

Query: 54  DESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
             +L  ++ M   G  C PDVV  + +I  FF E ++ KA  +   + + G +PDV  YN
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CKA  ++ A  VL ++ + G  PD VTY+ MI    + G ++ A K+F ++ + 
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P ++T    + +    G++ +A +  D M                 G   +G     
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                S++S G   +   + +L+      G  ++   + TEM  +G+ P+VVTYS +IS+
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-LP 332
             R G+  DA++       +G+ P+   Y  +I  +C  G L  A E +  MI+ G   P
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DIV +++++ + CK+G    A +IF+  +D+G  P V ++N++       G   +A  ++
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             M   G+EPD +TYN+L+    ++G +++ + L  +M+    +P  ++Y I++ G  + 
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            R   + +    M E G     + Y +++ G+       EA+ L   L +M+
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 195/400 (48%), Gaps = 17/400 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YN L+   C+A + +L   +   +   G   D +T N ++  LC     E A  V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 164 FDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
               + +  C P  ++Y+I+++A      + +A+ LL  M   K+G              
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA--KQG-------------- 258

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV++Y+ ++    N G+  +   L  EM  +G++P+VVTY+++I +LC+    + 
Sbjct: 259 GACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDK 318

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VLR     G  PD  +Y  +I  Y   GRL  A +    M   G +P+IV  N+ LA
Sbjct: 319 AELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLA 378

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           + CK+G + +A E F+ ++  G  P++ SY T+     S G     +G+ + M S GI  
Sbjct: 379 SLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA 438

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +   +  LI    + GMVD+A+ +  +M+     P V++Y+ +I  F +  R+ +++E  
Sbjct: 439 NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKF 498

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M  +G +PN   Y  +I+G    G   +A EL + +++
Sbjct: 499 NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN 538



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 19/417 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+  F +SM A G KPD+     L+  +  E      + +   ++  G   +  
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  LI  + K   ++ A  +   ++ +G SPDVVTY+ +I +    G +  A + F+Q+
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    +P    Y+ +IQ   + G   KA +L+ EM                   +CK G 
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A          G +P VI++N L+     +GK ++  K++  M   G+EP++VTY+ 
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+    ++G+  D + + R  + KG+ P+  +Y  +++   + GR   A +    MI  G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               +  Y  IL   C+N  AD+A+ +F+KL  +    +++  NTM +A++    K  A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            + + + + G+ P+E TY  +I  L +DG V++A  +   ME +   P     N II
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRII 798



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 195/436 (44%), Gaps = 32/436 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  D+++     M   G  PDVV  + +I  F      ++  R+ + +E
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF------SRMGRLTDAME 496

Query: 100 KYGE-------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSL 151
           K+ +       P+   Y+++I GFC    +  A +++  + ++G   PD+V ++ +I SL
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G +  A  +FD       +P VIT+  LI    L G+ DKA K+LD M         
Sbjct: 557 CKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM--------- 607

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                    E  G +PD+++YN LL      G+  +G  L  EM  +G++PN VTY I++
Sbjct: 608 ---------EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + L R G+T  A        E G T     Y  ++   C++   D AI     + +    
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVK 718

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
             I   NT++ A  K    ++A E+F  +S  G  PN S+Y  M   L   G    A  M
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNM 778

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            S M   GI P     N +I  L   G + +A   L  ++  R      + ++++  F +
Sbjct: 779 FSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSR 838

Query: 452 TRRINESIEVLAAMFE 467
             +  E I++L A ++
Sbjct: 839 KGKYQEDIKLLPAKYQ 854



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 38/204 (18%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIF--------------------------------- 357
           +P    YN ++   C+    D  L +F                                 
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 358 ---EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLIS 412
               ++S++GC PN  SY+ +  AL  +    RAL ++  M  +G    PD + Y+++I 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
               +G   +A  L  +M     +P V++YN+II   CK R ++++  VL  M   G +P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 473 NETTYVLLIEGIGYGGWRAEAMEL 496
           +  TY  +I G    G   EA ++
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKM 357


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 215/450 (47%), Gaps = 19/450 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKV 128
           D  +CT L+    +     +A RV E +  E+   P+   Y+ LI G C+A ++E A ++
Sbjct: 205 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 264

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +  +G  P   TY ++I + C  GM + A K+ D++    C P V TYTILI     
Sbjct: 265 KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCR 324

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           EG+ ++A  +  +M                 G CK+G V  AFQ +  +E   C+P++ +
Sbjct: 325 EGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT 384

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+  L  + K  +   L+  ++  GL P+ VTY+IL+   C++G+   A ++  +  
Sbjct: 385 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 444

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             GL PD +++  LI   CK GRL+ A   L  M+  G   D V +  ++   CK G A 
Sbjct: 445 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 504

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
               +FE + +  C     ++N    AL        A  M+ +M+  G+ P  +T+  LI
Sbjct: 505 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 564

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR G    ++ +L  M+     P V +Y III G C   R+ E+  +L +M   G  
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN  TY +L++     G    A ++ + +V
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 654



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 222/468 (47%), Gaps = 28/468 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ++S     RPN+           +  LI     AG+ +E+    + MV  GC+P     T
Sbjct: 231 KMSKEENCRPNS---------VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 77  KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LIK       ++KA++++ E+  K   P+V  Y  LI   C+  +IE AN V  ++   
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P ++T+N +I   C  G + SAF++   + + NCKP + TY  L++           
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME----------- 390

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+C+     +AF  +R +   G  PD ++YN+L+      G+      +   M
Sbjct: 391 -------GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S GLEP+  T++ LI  LC+ G+ E A  +L +  +KG++ D  ++  LI  +CK G+ 
Sbjct: 444 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 503

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                  + M+ + CL     +N  L A  K+   ++A  +  K+   G  P+V ++  +
Sbjct: 504 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                 +G+   +L M+  M   G  P+  TY  +I+ LC +G V+EA  +L  M S   
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 623

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P   +Y +++    K  R++ + ++++ M + GC+PN   Y  L+ G
Sbjct: 624 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 202/424 (47%), Gaps = 54/424 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +++  CK   ++ A     ++   GF  D      ++ + C R  +  AF+VF+++ 
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233

Query: 169 RD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           ++ NC+P  +TY+ILI                   G+C+ G + +AFQ  + +  +GCQP
Sbjct: 234 KEENCRPNSVTYSILIH------------------GLCEAGRLEEAFQLKQEMVEKGCQP 275

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +L++   ++G  ++  K++ EM ++   PNV TY+ILI  LCR+GK E+A  V 
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM---------------------- 325
           R   + GL P   +++ LI+ YCK+G +  A + L  M                      
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395

Query: 326 -------------ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
                        + +G LPD V YN ++  FCK G  + A  IF  ++  G  P+  ++
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 455

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             +   L   G   +A G++  M+ KGI  DE+T+ +LI   C+ G   +   L  +M  
Sbjct: 456 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 515

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
            R   T  ++N  +    K  ++NE+  +L  M + G  P+  T+ +LIEG    G  A 
Sbjct: 516 NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 575

Query: 493 AMEL 496
           ++++
Sbjct: 576 SLKM 579



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 221/471 (46%), Gaps = 32/471 (6%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H          +  LI R  R GK +E+      M+ +G  P ++    LI  + +E
Sbjct: 310 PNVH---------TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 360

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
                A +++ ++EK   +P++  YN L+ G C+ ++   A  +L R+   G  PD VTY
Sbjct: 361 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 420

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           NI++   C  G +  AF +F+ +     +P   T+T LI      G+ ++A  +L  M  
Sbjct: 421 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 480

Query: 203 ---------------GMCKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                          G CK G      F F   +E+R C     ++N  L  L    K  
Sbjct: 481 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR-CLTTAHTFNCFLDALGKDYKLN 539

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   ++ +M+  GL P+VVT++ILI   CR G+T  ++ +L   K+ G +P+ Y+Y  +I
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  C +GR++ A   L  M S G  P+   Y  ++ A  K G  D+A +I   +   GC 
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659

Query: 367 PNVSSYNTMFSALWSSGDKI--RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           PN   Y+ + S    S   I  RAL    ++ ++ +  +E   N L S + R   VD A+
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 719

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
            +  +++     PT   YN +++G CK  RI E+ ++   M + G  P++ 
Sbjct: 720 KIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 769



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 11/393 (2%)

Query: 118 KANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           ++N +EL  +    + R   +  D+     ++G L SR +   A K    L+++ C+ + 
Sbjct: 56  QSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQE-CEDSE 114

Query: 177 ITYTILIQATMLEGQTDKAMKL----LDEMGMC--KKGMVGQAFQFVRSLESRGCQPDVI 230
                L+ A  L+G T+   +L       + MC  K  M   AF   R + + G     I
Sbjct: 115 NGVVKLMGA--LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 172

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RA 289
            Y  ++  L   G  +  E    +++  G   +    + L+ + CR     +A  V  + 
Sbjct: 173 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 232

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
           +KE+   P++ +Y  LI   C+ GRL+ A +    M+  GC P    Y  ++ A C  G 
Sbjct: 233 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 292

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A+++ ++++   C PNV +Y  +   L   G    A G+  +ML  G+ P  IT+N+
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  C++G V  A  LL  ME    +P + +YN ++ G C+  +  ++  +L  + + G
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+  TY +L++G    G    A  + N++ S
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 183/449 (40%), Gaps = 92/449 (20%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K  ++   +  +V NG  PD V    L+  F +E + N A  +   +   G EPD F
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + ALI G CK  ++E AN +L  +  +G S D VT+  +I   C  G  +    +F+ +
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 168 LRDNC-----------------------------------KPTVITYTILIQATMLEGQT 192
           + + C                                    P+V+T+TILI+     G+T
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             ++K+L+ M                 G+C  G V +A   + S+ S G  P+  +Y +L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL--------------------- 274
           ++  +  G+ +   ++++ M+  G +PN   YS L+S                       
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 693

Query: 275 ----------CRDGKTEDAVDVLRAAK-----EKGLTPDAYSYDPLISAYCKDGRLDLAI 319
                     C        +DV  A K     +K   P    Y+ L+   CK+GR+  A 
Sbjct: 694 SLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEAD 753

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M+  G  PD    ++I+  +CK    D  LE  + + D    P+ +SY  +   L
Sbjct: 754 QLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGL 812

Query: 380 WSSGDKIRALGMISEMLSK-GIEPD-EIT 406
            + G    A  ++S+++   GIE + E+T
Sbjct: 813 RNEGRVQEAQKLVSDLVRHTGIEEEVEVT 841



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 56/361 (15%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  LI    + GK  +  +  E+MV N C          +    ++ K N+A  ++ 
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 546

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + KYG  P V  +  LI G C+A +  L+ K+L+R++  G SP+V TY I+I  LC+ G
Sbjct: 547 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 606

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +E A  +   +      P   TY +L++A +  G+ D+A                  FQ
Sbjct: 607 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA------------------FQ 648

Query: 216 FVRSLESRGCQPDVISYNMLL------------RTLLNMGKW--------EEGEKLMTEM 255
            V ++   GCQP+   Y+ LL            R L + G          E     ++  
Sbjct: 649 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 708

Query: 256 ISRGLE----------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           + R ++                P    Y+ L+  LC++G+  +A  + +   + GL PD 
Sbjct: 709 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 768

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +   +I  YCK  + D  +EF+  ++ +  +P   +Y  ++      G   +A ++   
Sbjct: 769 -AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 827

Query: 360 L 360
           L
Sbjct: 828 L 828


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 225/464 (48%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           A +FD++   +E +   GC P VV    ++    ++RK ++A+ + ++++K  +P++  Y
Sbjct: 329 AERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTY 388

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C A ++  A K+ D +   G  P++++ NIM+  LC    +E A ++F+    
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASE 448

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  +TY  LI     +G+ D A +L ++M                      G    
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + +  RG +PD+   N  +  +   G+ E+G  +  +M S G  P+V +YSILI 
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G+  +  ++ +A  ++G   DA +Y+ ++   CK G++D A E L+ M      P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +  Y +I+    K    D+A  +FE+    G   NV  Y+++       G    A  ++
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM+ KG+ P+  T+NSL+  L +   +DEA+     M+  +  P   +Y+I+I G C+ 
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++ N++      M ++G  PN  TY  +I G+   G   +A  L
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSL 792



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 216/475 (45%), Gaps = 20/475 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F    + +  LI     A + + +L  +  M   G +  V + T L++   +E +   
Sbjct: 170 LKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ ++ E+     EPD+  YN  I  F KA  +++A K    L++ G  PD V+Y  M+ 
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVW 289

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G +  A ++F Q+  +   P    Y  +I       + D A KLL+         
Sbjct: 290 VLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLER-------- 341

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                     L  RGC P V+S+N +L  L    K +E   L  +++ +  +PN+ TY+I
Sbjct: 342 ----------LRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNI 390

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I  LC  G+  +A  +    +  GL P+  S + ++   CK  +L+ A    +     G
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C P+ V Y +++    K G  D A  +FEK+ D G   N   Y ++    +  G K    
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM+ +G  PD    N+ + C+ + G V++   +  DM+S  F P V SY+I+I G 
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            K  +  E+  +  AM ++G   +   Y  +++G+   G   +A E+   +   H
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 199/432 (46%), Gaps = 25/432 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  AYNA++     ++ +    KVL+ +   G+         ++ +L     +E AF+V
Sbjct: 108 PD--AYNAVLPFL--SHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRV 163

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +     +P    YT+LI A     Q ++A++LL                  R ++  
Sbjct: 164 IGAMRHLKFRPPFSAYTVLIGALAEARQPERALELL------------------RQMQDV 205

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +  V  +  L+R L   G+ E    L+ E+    LEP++V Y++ I    + G  + A
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
                  K  GL PD  SY  ++   CK GRL  A E    M ++  +P    YNT++  
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +      D A ++ E+L + GC P+V S+N++ + L        AL +  +++ K  +P+
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPN 384

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYN +I  LC  G V+EA  +  +ME     P ++S NI++   CK  ++ E+  +  
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMHAISRDTFKRLNRTFPLLD 522
           +  E+GC PN  TY  LI+G+G  G   +A  L   ++ + H  +   +  L R F  + 
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF-FMH 503

Query: 523 VYKEISHLATKD 534
             KE  H   K+
Sbjct: 504 GRKEDGHKIYKE 515



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 197/426 (46%), Gaps = 33/426 (7%)

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           YG P+  A  AL++   ++ ++E A +V+  +R   F P    Y ++IG+L      E A
Sbjct: 137 YGLPNP-ACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERA 195

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRS 219
            ++  Q+     + +V  +T L++A   EGQ + A+ L+DE+ G C              
Sbjct: 196 LELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSC-------------- 241

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                 +PD++ YN+ +      G  +   K   E+ + GL P+ V+Y+ ++  LC+ G+
Sbjct: 242 -----LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGR 296

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A ++    + +   P AY+Y+ +I  Y    R D A + L+ +   GC+P +V++N+
Sbjct: 297 LGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNS 356

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           IL    K    D+AL +F+ +      PN+S+YN +   L  +G    A  +  EM   G
Sbjct: 357 ILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG 415

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+ ++ N ++  LC+   ++EA  +          P  ++Y  +I G  K  +I+++ 
Sbjct: 416 LFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAY 475

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT-F 518
            +   M + G   N   Y  LI      G + +           H I ++  +R  R   
Sbjct: 476 RLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG----------HKIYKEMIRRGGRPDL 525

Query: 519 PLLDVY 524
            LL+ Y
Sbjct: 526 TLLNTY 531


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 202/409 (49%), Gaps = 17/409 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+    N LI+ FC+  +++L   VL +    G  P +VT+  +I  L   G    A ++
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD ++   C+P   TYT +I      G+T  A  L  +M                  +CK
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              V +A      ++++   P + +Y  L++ L N  +W+E   L+ EM S  + PNVVT
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           +++L+ + C++GK   A  VL+   E G+ PD  +Y+ L+  Y     +  A +  D MI
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + GC PD+ +Y+ ++  +CK    D+A ++F ++   G  PN  SYNT+   L   G   
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +   M + G  P+  TY  L+   C+ G + +A  L   M+ST  +P ++ YNI++
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              CK+  + ++ E+ + +F  G +PN   Y  +I G+   G   EA+E
Sbjct: 368 NAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 215/421 (51%), Gaps = 18/421 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G +P +V  T LI    +  K  +AV + + +   G +PD + Y  +I+G CK  +  LA
Sbjct: 40  GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +  ++   G   +VVTY+ +I SLC    +  A  +F  +   +  PT+ TYT LIQ 
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159

Query: 186 TMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPD 228
                +  +A  LL+EM                   CK+G V  A   ++++   G +PD
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++YN L+       +  E  KL   MI++G +P+V +YSILI+  C+  + ++A  +  
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G TP+  SY+ LI   C+ GRL  A +    M ++G LP++  Y  +L  FCK G
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A  +F  +      PN+  YN + +A+  SG+   A  + SE+   G++P+   Y 
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++I+ LC++G++DEA+    +ME     P   SYN+II GF + +  + ++ ++  M ++
Sbjct: 400 TIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459

Query: 469 G 469
           G
Sbjct: 460 G 460



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 182/369 (49%), Gaps = 18/369 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G SP+  T NI+I   C    ++  F V  + ++   +PT++T+T LI            
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLIN----------- 53

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ K G   QA +    + +RGCQPD  +Y  ++  L  +G+      L  +M
Sbjct: 54  -------GLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM 106

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G + NVVTYS LI SLC+  +  +A+D+    K K ++P  ++Y  LI   C   R 
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW 166

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   L+ M S   +P++V +N ++  FCK G    A  + + ++++G  P+V +YN++
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                   + + A  +   M++KG +PD  +Y+ LI+  C+   +DEA  L  +M     
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P  +SYN +I G C+  R+ E+ ++   M   G  PN  TY +L++G    G+  +A  
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346

Query: 496 LANALVSMH 504
           L  A+ S +
Sbjct: 347 LFRAMQSTY 355



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 144/283 (50%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +E  G  P+  + N+L+     + + + G  ++ + I  GL+P +VT++ LI+ L + GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
              AV++      +G  PD Y+Y  +I+  CK G   LA      M   GC  ++V Y+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ + CK    ++AL+IF  +      P + +Y ++   L +      A  +++EM S  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I P+ +T+N L+   C++G V  A G+L  M      P V++YN ++ G+     + E+ 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++   M  KGCKP+  +Y +LI G        EA +L N ++ 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIH 283



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 18/278 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK   +   +++M   G +PDVV    L+  +    +  +A ++ +++ 
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +PDVF+Y+ LI+G+CKA +I+ A ++ + +  +G +P+ V+YN +I  LC  G + 
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F  +  +   P + TY IL+     +G   KA +L   M                
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             MCK G +  A +    L   G QP+V  Y  ++  L   G  +E  +    M   G  
Sbjct: 368 NAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCP 427

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           P+  +Y+++I    +      AV ++   +++G   DA
Sbjct: 428 PDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           K+    R   S   +PN  L+ +++       L+    ++G   ++      +   G +P
Sbjct: 343 KAFRLFRAMQSTYLKPN--LVMYNI-------LVNAMCKSGNLKDARELFSELFVIGLQP 393

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           +V + T +I    +E   ++A+     +E  G  PD F+YN +I GF +      A  ++
Sbjct: 394 NVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLI 453

Query: 130 DRLRSRGFSPDVVT 143
             +R RGF  D  T
Sbjct: 454 GEMRDRGFITDAGT 467


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 221/463 (47%), Gaps = 22/463 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P V +   LI+ F +     +A ++ +        ++F YN+L+S  CK  ++  A  + 
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
            ++  +G +P  V+YN MI   C +G ++ A  VF  +L    KP VITY+IL+      
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G T+ A  + D M                 G+CK G   +A   ++    +G  P  ++Y
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N ++   +  G          EM   G+ PNV+TY+ LI+  C++  T+ A+ +    + 
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRN 656

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KGL  D  +Y  LI  +CK   ++ A      ++  G  P+ V YN++++ +    N + 
Sbjct: 657 KGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEA 716

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL + +++   G   ++ +Y T+   L   G  + AL + SEM +KGI PD I Y  LI+
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC  G ++ A  +L +ME     P V  YN +I G  K   + E+  +   M +KG  P
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLN 515
           N+TTY +LI G   GG  A       +L+S+        KR+N
Sbjct: 837 NDTTYDILINGKIKGGNSA-----LKSLLSLKFKDGKGMKRIN 874



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 65/440 (14%)

Query: 80  KKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           KKFF E KS + V++          D  AY+ +I  FCK   +ELA  +L  +R +G+ P
Sbjct: 264 KKFFLEAKS-RGVKL----------DAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVP 312

Query: 140 DVVTYNIMIGSLCSRG-MIE----------------------------------SAFKVF 164
              T+  +IG+   +G M+E                                  SA + F
Sbjct: 313 SEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFF 372

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D++  +   P  +TY +LI+                    CK G + +A+     ++++ 
Sbjct: 373 DKMNENGPSPNRVTYAVLIEWC------------------CKNGNMAKAYDLYTQMKNKN 414

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P V   N L+R  L +   EE  KL  E ++  +  N+ TY+ L+S LC++GK  +A 
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEAT 473

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            + +   +KGL P   SY+ +I  +C+ G LD+A      M+  G  P+++ Y+ ++  +
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            KNG+ + A  +F+++ D    P+  +YN   + L   G    A  M+ + + KG  P  
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TYNS++    ++G V  A+    +M  +   P VI+Y  +I GFCK    + ++++   
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M  KG + +   Y  LI+G 
Sbjct: 654 MRNKGLELDIAAYGALIDGF 673



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 73/361 (20%)

Query: 222 SRGCQPDVISY----NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           +R  + D++ +    N LL  L+      E  ++  +M+ +G+  +  T  I++ +  +D
Sbjct: 198 NRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKD 257

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL--------------- 322
              E+A      AK +G+  DA +Y  +I A+CK+  ++LA   L               
Sbjct: 258 NNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTF 317

Query: 323 --------------------DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
                               D M+S G   ++V   T++  +CK      ALE F+K+++
Sbjct: 318 TSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNE 377

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP-------------------- 402
            G  PN  +Y  +      +G+  +A  + ++M +K I P                    
Sbjct: 378 NGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREE 437

Query: 403 -----DE---------ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                DE          TYNSL+S LC++G + EA  L   M      PT +SYN +ILG
Sbjct: 438 ASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILG 497

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            C+   ++ +  V + M + G KPN  TY +L++G    G    A  + + +V  + +  
Sbjct: 498 HCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPS 557

Query: 509 D 509
           D
Sbjct: 558 D 558



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 111/237 (46%)

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            + ++  Y+ L++S  +  K  DA+       E  + P     + L++A  K+  +  A 
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAR 229

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E  + M+  G   D    + ++ A  K+ N ++A + F +    G   + ++Y+ +  A 
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             + D   A G++ +M  KG  P E T+ S+I    + G + EA+ L  +M S   +  V
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNV 349

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +    ++ G+CK  ++  ++E    M E G  PN  TY +LIE     G  A+A +L
Sbjct: 350 VVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 126/286 (44%), Gaps = 4/286 (1%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            F+ S +      D+  YN LL + +   K  +       ++   + P +   + L+++L
Sbjct: 160 HFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTAL 219

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            ++    +A +V      KG+  D ++   ++ A  KD   + A +F     S G   D 
Sbjct: 220 VKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDA 279

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             Y+ ++ AFCKN + + A  + + + D G  P+  ++ ++  A    G+ + AL +  E
Sbjct: 280 AAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDE 339

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+S G++ + +   +L+   C+   +  A+     M      P  ++Y ++I   CK   
Sbjct: 340 MVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN 399

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + ++ ++   M  K   P     V ++  +  G  + E+ E A+ L
Sbjct: 400 MAKAYDLYTQMKNKNICPT----VFIVNSLIRGFLKVESREEASKL 441


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 218/412 (52%), Gaps = 23/412 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           +  LI+    A + D+++  +  M  +G +P+VV+ + L++ + +  +     +V +E+ 
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS 212

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  EPDV  Y  LI   CK  + + A+ V+D +  RG  P+VVTYN++I  +C  G ++
Sbjct: 213 EKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVK 272

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  V  ++      P V+TY  LI+      + D+AM LL+EM                
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+C  G + QAFQ    +E  GC  ++++YN+L+  LL + K  +  +LM EM S G
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           LEP+  TYSILI   C+  + + A D+L   +++G+ P+ + Y PL+ A C+ G ++ A 
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452

Query: 320 EFLDYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              + M  D   P D+V Y+T++   CK G+   A E+ + + D G  P+  +Y+ + + 
Sbjct: 453 NLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
              SGD   A G++ +M + G  PD   ++SLI      G +++ + L+ +M
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 224/453 (49%), Gaps = 24/453 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           D+++  + SM + G + DVV    LI+      + +KAV +M E+ E   EP+V  Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + G+CK+ + E   KV   +  +G  PDVV Y  +I SLC  G  + A  V D ++R   
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +P V+TY +LI                    MCK+G V +A   ++ +  +G  PDV++Y
Sbjct: 252 EPNVVTYNVLINC------------------MCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRG---LEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           N L++ L ++ + +E   L+ EM+ RG   ++PNVVT++ +I  LC  G+   A  V   
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +E G   +  +Y+ LI    +  ++  A+E +D M S G  PD   Y+ ++  FCK   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A ++   + D G  P +  Y  +  A+   G   RA  + +EM       D + Y++
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYST 471

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C+ G +  A  LL  +      P  ++Y+I+I  F K+  +  +  VL  M   G
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+   +  LI+G    G   + +EL   +++
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMIT 564



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 192/364 (52%), Gaps = 26/364 (7%)

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL---RDNCKPTVITYTI 181
           A  +LD L S     D V+YN ++ +LC RG  + A  +   +       C+P  ++YT+
Sbjct: 64  ATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L++A                  +C   +  QA   +RS+ S G + DV++Y  L+R L +
Sbjct: 121 LMRA------------------LCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCD 162

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             + ++  +LM EM   G+EPNVV YS L+   C+ G+ ED   V     EKG+ PD   
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVM 222

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI + CK G+   A   +D M+  G  P++V YN ++   CK G+  +A+ + +K+S
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGM 419
           + G  P+V +YNT+   L    +   A+ ++ EM+     ++P+ +T+NS+I  LC  G 
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + +A  +   ME T     +++YN++I G  +  ++ +++E++  M   G +P+  TY +
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402

Query: 480 LIEG 483
           LI+G
Sbjct: 403 LIKG 406



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 201/434 (46%), Gaps = 58/434 (13%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+  +Y  L+   C     + A  +L  +RS G   DVVTY  +I  LC    ++ A ++
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++     +P V+ Y+ L+Q                  G CK G      +    +  +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQ------------------GYCKSGRWEDVGKVFVEMSEK 214

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PDV+ Y  L+ +L  +GK ++   +M  M+ RGLEPNVVTY++LI+ +C++G  ++A
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTIL 341
           + VL+   EKG+ PD  +Y+ LI        +D A+  L+ M+    +  P++V +N+++
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI 334

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C  G   QA ++   + + GC  N+ +YN +   L       +A+ ++ EM S G+E
Sbjct: 335 QGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE 394

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT----------------------- 438
           PD  TY+ LI   C+   VD A  LL  M      P                        
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454

Query: 439 -----------VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V++Y+ +I G CK   +  + E+L ++ ++G  P+  TY ++I      
Sbjct: 455 FNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 488 GWRAEAMELANALV 501
           G     ME AN ++
Sbjct: 515 G----DMEAANGVL 524



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 44/342 (12%)

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---SRGLEPNVVT 266
           +G+A   + +L S     D +SYN +L  L   G  +    L+  M         PN V+
Sbjct: 61  LGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++L+ +LC D   + AV +LR+ +  G+  D  +Y  LI   C    +D A+E +  M 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P++V Y+++L  +CK+G  +   ++F ++S+ G  P+V  Y  +  +L   G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM---------------- 430
           +A G++  M+ +G+EP+ +TYN LI+C+C++G V EA+G+L  M                
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 431 -----------------ESTR----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
                            E  R     +P V+++N +I G C   R+ ++ +V A M E G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           C  N  TY LLI G+       +AMEL + + S+  +  D+F
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL-GLEPDSF 398



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 157/377 (41%), Gaps = 89/377 (23%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++   ++G++++       M   G +PDVVM T LI    +  K+ KA  VM+++ 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL------- 151
           + G EP+V  YN LI+  CK   ++ A  VL ++  +G +PDVVTYN +I  L       
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 152 ------------------------------CSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
                                         C  G +  AF+V   +    C   ++TY +
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI   +   +  KAM+L+DEM                 G CK   V +A   + ++  RG
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 225 CQP----------------------------------DVISYNMLLRTLLNMGKWEEGEK 250
            +P                                  DV++Y+ ++      G  +  ++
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+  ++  GL P+ VTYSI+I+   + G  E A  VL+     G  PD   +D LI  Y 
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 311 KDGRLDLAIEFLDYMIS 327
             G ++  +E +  MI+
Sbjct: 548 TKGEINKVLELIREMIT 564


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 219/466 (46%), Gaps = 26/466 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G    + Y+ + M+  G  P VV  T LI  +  E + +KA +V  E+ 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+ + + A+ISG C+AN +  A ++   ++ R   P  VTYN+MI   C  G I 
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF + D+++     P   TY  LI                   G+C  G V +A +FV 
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLIS------------------GLCSVGRVSEAKEFVD 426

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            L     + + + Y+ L+      G++++       M+ RG+  ++V Y+ILI    R+ 
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            T     +L+     GL PDA  Y  +I  + K G L  A    D M+ +GCLP++V Y 
Sbjct: 487 DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYT 546

Query: 339 TILAAFCKNGNADQALEIFEK---LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            ++   CK G  D+A E+  K   +SDV   PN  +Y      L   G+  +A+ +   M
Sbjct: 547 ALINGLCKAGLMDKA-ELLSKETLVSDV--TPNHITYGCFLDHLTRGGNMEKAVQLHHAM 603

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L KG     ++YN LI   CR G ++EA  LL  M      P  I+Y+ II   CK   +
Sbjct: 604 L-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNL 662

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E+I++   M +KG KP+   Y  L+ G    G   +A EL + ++
Sbjct: 663 QEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMI 708



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 206/464 (44%), Gaps = 27/464 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           L+    R  +F++ L   + +V+   +PD+ + + +++   + +  NKA  ++  +E   
Sbjct: 102 LLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQ 161

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +  +  YN LI G CK+ +I  A ++ + L  +G   +VVTY          G    A 
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAE 212

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F ++         ITY+ILI +    G+ D A+  LD+M                 G 
Sbjct: 213 LLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY 272

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G    A  +   +  +G  P V++Y  L+    N G+W +  K+  EM ++G+ PN 
Sbjct: 273 CKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ +IS LCR     +A+ +    KE+ + P   +Y+ +I  +C+ G +  A   LD 
Sbjct: 333 YTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDE 392

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G +PD   Y  +++  C  G   +A E  + L       N   Y+ +       G 
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+     M+ +G+  D + Y  LI    R+       GLL +M +   RP  + Y  
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +I    K   + E+  +   M ++GC PN  TY  LI G+   G
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 197/433 (45%), Gaps = 35/433 (8%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+V   +AL++G  +  +      + D + S    PD+  Y+ ++ SLC       A ++
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +  + CK +++ Y +LI                   G+CK   + +A +    L  +
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIH------------------GLCKSRRIWEALEIKNCLMQK 195

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G + +V++Y          GK+ E E L  EM  +GL  N +TYSILI S CR G+ ++A
Sbjct: 196 GLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNA 246

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +  L    +  +    Y Y+ LI+ YCK G    A  + D MI  G  P +V Y ++++ 
Sbjct: 247 IGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISG 306

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +C  G   +A +++ +++  G  PN  ++  + S L  +     A+ +  EM  + I P 
Sbjct: 307 YCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPS 366

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E+TYN +I   CR G + EA  LL +M    F P   +Y  +I G C   R++E+ E + 
Sbjct: 367 EVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD 426

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM--------HAISRDTFKRLN 515
            + +   K N   Y  L+ G    G   +A+     +V          +AI  D   R +
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 516 RTFPLLDVYKEIS 528
            T  L  + KE+ 
Sbjct: 487 DTRALFGLLKEMH 499



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 178/420 (42%), Gaps = 54/420 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI      G++ ++      M A G  P+    T +I    +     +A+R+  E+ 
Sbjct: 300 YTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMK 359

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P    YN +I G C++  I  A  +LD +  +GF PD  TY  +I  LCS G + 
Sbjct: 360 ERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVS 419

Query: 159 SAFKVFDQLLRDN---------------CKP--------------------TVITYTILI 183
            A +  D L +D+               CK                      ++ Y ILI
Sbjct: 420 EAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILI 479

Query: 184 QATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQ 226
             T  E  T     LL EM                    K G + +AF     +   GC 
Sbjct: 480 DGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL 539

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++Y  L+  L   G  ++ E L  E +   + PN +TY   +  L R G  E AV  
Sbjct: 540 PNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ- 598

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L  A  KG      SY+ LI  +C+ G+++ A + L  M  +  LPD + Y+TI+   CK
Sbjct: 599 LHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCK 658

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             N  +A++++  + D G  P+  +Y+ +      +G+  +A  +  EM+ +G+  + +T
Sbjct: 659 RSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 20/314 (6%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RVS + E   + H     +    +  L+    + G+F +++     MV  G   D+V   
Sbjct: 417 RVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYA 476

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    +E  +     +++ +  +G  PD   Y  +I    KA  ++ A  + D +   
Sbjct: 477 ILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDE 536

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+VVTY  +I  LC  G+++ A  +  + L  +  P  ITY   +      G  +KA
Sbjct: 537 GCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA 596

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++L   M                    +G     +SYN+L+R    +GK EE  KL+  M
Sbjct: 597 VQLHHAM-------------------LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGM 637

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
               + P+ +TYS +I   C+    ++A+ +     +KGL PD  +Y  L+   C  G L
Sbjct: 638 TDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGEL 697

Query: 316 DLAIEFLDYMISDG 329
           + A E  D MI  G
Sbjct: 698 EKAFELRDEMIRRG 711


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 238/513 (46%), Gaps = 49/513 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----- 103
           R G+ DE+   +E M   G  P+VV     I    +  +   A R+   +++  E     
Sbjct: 224 REGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPR 283

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD   ++ ++SGFC+A  ++ A  ++D +R  GF   V +YN  +  L   GM+  A ++
Sbjct: 284 PDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++  +  +P   TY I++     EG+     K+ D +                   C 
Sbjct: 344 LREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCS 403

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G    A + +  +  +GC P+  +YN+LL++L   G+  E E+L+  M  +G   +  +
Sbjct: 404 EGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTAS 463

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKG-----------------------LTPDAYSYD 303
            +I+I  LCR+ K + A+D++     +G                         PD  +Y 
Sbjct: 464 CNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYS 523

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            L+SA CK+GR D A + L  MI     PD V Y+T +  +CK+G    A+++   +   
Sbjct: 524 TLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKK 583

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P+  +YN +        +    L +ISEM  KGI P+ +TYNSLI   C  GMV++A
Sbjct: 584 GCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKA 643

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + LL +M      P + S+ ++I  FCKT   + +  V  A     C   E  Y L+   
Sbjct: 644 MPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLST-CGQKEVLYSLMCTQ 702

Query: 484 IG-YGGWRAEAMELANALVSMH-AISRDTFKRL 514
           +  YG W  EAM +   ++ +  +I R  +K++
Sbjct: 703 LSTYGRW-LEAMNILETVLELRISIHRFPYKQI 734



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 241/502 (48%), Gaps = 77/502 (15%)

Query: 40  FMKLIKRSFRAGKFD--ESLYFIESMVANGCKPDV--------VMCT----KLIKKFFQ- 84
           + +L+  + +  +FD  ESLY  + ++ +G  PDV         +C     +L ++ F  
Sbjct: 118 YNRLLLAALQEARFDLVESLY--KDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDA 175

Query: 85  --ER-------------KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
             ER             ++ +++  + +L+     ++   N +++GFC+  Q++ A +++
Sbjct: 176 MPERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLV 235

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL----RDNCKPTVITYTILIQA 185
           +R+R  G +P+VVT+N  I +LC  G +  A+++F+ +     R   +P  +T+ +++  
Sbjct: 236 ERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLS- 294

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G C+ GMV +A   V  +   G    V SYN  L  L+  G  
Sbjct: 295 -----------------GFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMV 337

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E ++L+ EM   G++PN  TY+I++  LC++GK  D   V    K   +TPD  +Y  L
Sbjct: 338 GEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSL 397

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           + AYC +G    A   LD M   GC P+   YN +L +  K G   +A  + E++S+ G 
Sbjct: 398 LHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGY 457

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-----------------------IEP 402
             + +S N +   L  +     A+ ++  M ++G                         P
Sbjct: 458 SLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLP 517

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITY++L+S LC++G  DEA   L++M      P  + Y+  I G+CK  + + +++VL
Sbjct: 518 DRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVL 577

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M +KGCKP+  TY LLI G 
Sbjct: 578 RDMEKKGCKPSTRTYNLLIWGF 599



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 20/276 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    + G+FDE+   +  M+     PD V+    I  + +  K++ AV+V+  +E
Sbjct: 522 YSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDME 581

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P    YN LI GF + +  +   K++  ++ +G  P+V+TYN +I S C RGM+ 
Sbjct: 582 KKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVN 641

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + D++L++   P + ++ +LI+A         A ++ D                  
Sbjct: 642 KAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA----------------- 684

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           SL + G Q +V+ Y+++   L   G+W E   ++  ++   +  +   Y  +I  LC+  
Sbjct: 685 SLSTCG-QKEVL-YSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVD 742

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           + +    +L+    KG + D  ++ P+I A  + G+
Sbjct: 743 EVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGK 778


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 227/462 (49%), Gaps = 18/462 (3%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
           +E+L  I  M   GC PD V    ++    +  +  +   ++  ++  G  P+   YN L
Sbjct: 228 EEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNIL 287

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + G+CK   ++ A +V++ +  +G  PDV TYN M+  LC  G I+ A ++ D++     
Sbjct: 288 VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKL 347

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
            P V+TY  LI        +D A KL++EM                   C +G + +A  
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +   G  PD  +YN ++      GK  E  K+M EM  +GL+ +  T + L+ ++C
Sbjct: 408 VMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMC 467

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
            + + +DA  +   A+++G   D  +Y  LI  Y KD + D A++  + M   G +  I+
Sbjct: 468 LEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATII 527

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+   C +G  DQA++   +L + G  P+ S+ N +       G   +A    ++M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +   ++PD  T N L+  LCR+GM+++ + L     S       ++YNIII  FCK RR+
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            ++ +++  M  K  +P+  TY  ++ G+   G   EA +LA
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLA 689



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 220/447 (49%), Gaps = 23/447 (5%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILE---KYG-EPDVFAYNALISGFCKANQIEL 124
           +P+++ C  L+    +   S+  V   E+ +   K G +P+V  +N LI G+C  N  E 
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A ++++++   G  PD VTYN ++ +LC R  +     +  Q+      P   TY IL+ 
Sbjct: 230 ALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVH 289

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G CK   + +A + +  +  +G  PDV +YN ++R L + GK
Sbjct: 290 ------------------GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            +E  +L  +M S  L P+VVTY+ LI        ++ A  ++   K +G+  +  +++ 
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I  +C +G++D A   +  M+  G  PD   YNT++  +CK G   +A ++ +++   G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              +  + NT+   +        A  +  +   +G   DE+TY +LI    +D   D A+
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L  +M+ T    T+I+YN II G C + + +++++ L  + EKG  P+E+T  ++I G 
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571

Query: 485 GYGGWRAEAMELANALVSMHAISRDTF 511
            + G   +A +  N +V  H++  D F
Sbjct: 572 CWEGAVEKAFQFHNKMVE-HSLKPDIF 597



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 214/459 (46%), Gaps = 29/459 (6%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E+   IE M   G  PDV     +++    E K ++AVR+ + +E +   PDV  YN LI
Sbjct: 299 EAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLI 358

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G  +    + A K+++ +++RG   + VT+NIMI   C+ G I+ A  V  +++     
Sbjct: 359 DGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFS 418

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQF 216
           P   TY  +I      G+  +A K++DEMG                 MC +  +  A+  
Sbjct: 419 PDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTL 478

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 RG   D ++Y  L+       + +   KL  EM   G+   ++TY+ +I  LC 
Sbjct: 479 TMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCL 538

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GKT+ AVD L    EKGL PD  + + +I  YC +G ++ A +F + M+     PDI  
Sbjct: 539 SGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFT 598

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            N +L   C+ G  ++ L +F      G P +  +YN + S+         A  +++EM 
Sbjct: 599 CNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME-----------STRFRPTVISYNII 445
            K +EPD  TYN++++ L + G  +EA  L +              S     + + Y+  
Sbjct: 659 GKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQ 718

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I   C   +  +++++     +KG   N+ TY+ L++G+
Sbjct: 719 ISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 165/323 (51%), Gaps = 15/323 (4%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
             ++F+++ R   +P ++T   L+ A ++   +  ++    E+           FQ    
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNA-LVRSNSSHSLVFSREV-----------FQDAVK 204

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L   G QP+V ++N+L+    +    EE  +L+ +M   G  P+ VTY+ ++++LC+  +
Sbjct: 205 L---GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQ 261

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
                D+L   K  GL P+  +Y+ L+  YCK   L  A E ++ M   G LPD+  YNT
Sbjct: 262 LTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNT 321

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   C  G  D+A+ + +K+      P+V +YNT+    +       A  ++ EM ++G
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++ + +T+N +I   C +G +DEA  ++V M  + F P   +YN +I G+CK  ++ E+ 
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAY 441

Query: 460 EVLAAMFEKGCKPNETTYVLLIE 482
           +++  M  KG K +  T   L+ 
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLH 464



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 198/417 (47%), Gaps = 32/417 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +IK     GK DE+   +  MV +G  PD      +I  + +  K  +A ++M+ + + G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + D F  N L+   C   Q++ A  +  + R RG+  D VTY  +I         + A 
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+++++       T+ITY  +I+   L G+TD+A+  L+E+                 G 
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C +G V +AFQF   +     +PD+ + N+LLR L   G  E+G  L    IS+G   + 
Sbjct: 572 CWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDT 631

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD----LAIE 320
           VTY+I+ISS C++ + EDA D++   + K L PD Y+Y+ +++   K GR +    LA++
Sbjct: 632 VTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALK 691

Query: 321 FLD---YMISDGCLPDI----VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           F +    + +    P++    + Y+  +++ C  G    A+++F++    G   N  +Y 
Sbjct: 692 FAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYI 751

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIE---PDEITYNSLISCLCRDGMVDEAVGLL 427
            +   L           ++  M+S  I+    + + Y  ++ C   +  ++   G+L
Sbjct: 752 KLMDGLLKRRKSFTTTSLLPFMVSATIQFFDRNPMRYAHILWCFGFELEIEVPEGVL 808



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 39/218 (17%)

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG--- 383
           SD  +P  +  +T LAA+  +       +IF K+  +   PN+ + NT+ +AL  S    
Sbjct: 132 SDHTIPKPL-LDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSH 190

Query: 384 ----------DKIR-------------------------ALGMISEMLSKGIEPDEITYN 408
                     D ++                         AL +I++M   G  PD +TYN
Sbjct: 191 SLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYN 250

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++++ LC+   + +   LL+ M+++   P   +YNI++ G+CK + + E+ EV+  M  K
Sbjct: 251 TVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGK 310

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           G  P+  TY  ++ G+   G   EA+ L + + S   +
Sbjct: 311 GMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLV 348


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 262/564 (46%), Gaps = 81/564 (14%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P+   ++F+ +E   +KL   S      D+++ F + MV +      V C K+I  F + 
Sbjct: 63  PSLTQVTFEGEE---LKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRM 119

Query: 86  RKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            + + A+ +   +E    P +++++N LI  FC  +++  +     +L   GF PDVVT+
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179

Query: 145 NIMIGSLCSRG-----------MIESAF----KVFDQLLRDNCKPTVITYTILIQATMLE 189
           N ++  LC              M+E+ F     +FDQ++     P VIT+  LI    LE
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+  +A  L+++M                 GMCK G    A   +  +E    +PDV+ Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + ++  L   G   + + L +EM+ +G+ PNV TY+ +I   C  G+  DA  +LR   E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 293 KGLTPDAYSYDPLISA-----------------------------------YCKDGRLDL 317
           + + PD  +++ LISA                                   +CK  R D 
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A    D M S    PD+V +NTI+  +C+    D+ +++  ++S  G   N ++YNT+  
Sbjct: 420 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                 +   A  +  EM+S G+ PD IT N L+   C +  ++EA+ L   ++ ++   
Sbjct: 476 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             ++YNIII G CK  +++E+ ++  ++   G +P+  TY ++I   G+ G  A    ++
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS--GFCGKSA----IS 589

Query: 498 NALVSMHAISRDTFKRLNRTFPLL 521
           +A V  H +  +  +  N T+  L
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTL 613



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 23/431 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      G+  E+   +  MV  G   DVV    ++    +   +  A+ ++  +E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + + +PDV  Y+A+I   CK      A  +   +  +G +P+V TYN MI   CS G   
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++     P V+T+  LI A++ EG+  +A KL DEM                
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---------------- 392

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               R   PD ++YN ++       ++++ + +   M S    P+VVT++ +I   CR  
Sbjct: 393 --LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++ + +LR    +GL  +  +Y+ LI  +C+   L+ A +    MIS G  PD +  N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L  FC+N   ++ALE+FE +       +  +YN +   +        A  +   +   
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EPD  TYN +IS  C    + +A  L   M+     P   +YN +I G  K   I++S
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 459 IEVLAAMFEKG 469
           IE+++ M   G
Sbjct: 627 IELISEMRSNG 637



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 178/382 (46%), Gaps = 14/382 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    +L  +  M     KPDVV+ + +I +  ++   + A  +  E+LEK   P+VF
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I GFC   +   A ++L  +  R  +PDV+T+N +I +    G +  A K+ D++
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------------MCKKGMVGQAF 214
           L     P  +TY  +I       + D A  + D M               C+   V +  
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           Q +R +  RG   +  +YN L+     +      + L  EMIS G+ P+ +T +IL+   
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C + K E+A+++    +   +  D  +Y+ +I   CK  ++D A +    +   G  PD+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN +++ FC       A  +F K+ D G  P+ S+YNT+      +G+  +++ +ISE
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 395 MLSKGIEPDEITYNSLISCLCR 416
           M S G   D  T       +CR
Sbjct: 633 MRSNGFSGDAFTIKMAEEIICR 654



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 19/335 (5%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R +E R    ++ S+N+L++   +  K         ++   G +P+VVT++ L+ 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 273 SLCRDGKTEDA---------------VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            LC + +  +A               V +     E GLTP   +++ LI+  C +GR+  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   ++ M+  G   D+V Y TI+   CK G+   AL +  K+ +    P+V  Y+ +  
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L   G    A  + SEML KGI P+  TYN +I   C  G   +A  LL DM      P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V+++N +I    K  ++ E+ ++   M  +   P+  TY  +I G        +A  + 
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 498 NALVSMHAISRDT----FKRLNRTFPLLDVYKEIS 528
           + + S   ++ +T    + R  R    + + +EIS
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 113/258 (43%), Gaps = 22/258 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  +FD++ +  + M +    PDVV    +I  + + ++ ++ ++++  + + G   +  
Sbjct: 413 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI GFC+ + +  A  +   + S G  PD +T NI++   C    +E A ++F+ +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                    + Y I+I       + D+A  L   +                 G C K  +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A      ++  G +PD  +YN L+R  L  G+ ++  +L++EM S G   +  T  + 
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648

Query: 271 ISSLCRDGKTEDAVDVLR 288
              +CR    E   + LR
Sbjct: 649 EEIICRVSDEEIIENYLR 666



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    +  K DE+     S+  +G +PDV     +I  F  +   + A  
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           +   ++  G EPD   YN LI G  KA +I+ + +++  +RS GFS D  T
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 19/459 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           QF K++    +A     +L   + M  NG + D      LI  F Q   ++ +  +  +I
Sbjct: 63  QFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI 122

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K   P    +N LI G C    I  A    D++ ++GF  D V+Y  +I  LC  G I
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 182

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++     +P  + Y ++I                    MCK  +V  AF   
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIID------------------NMCKAKLVNDAFDLY 224

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + ++   PDV +YN L+     + K      L  +M    + PNV T++IL+   C++
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK  DA  VL    +  + PD  +Y+ L+  YC   +++ A +  D M S G + ++  Y
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++  FCK    D+A+ +FE++      PNV +Y+++   L   G    AL ++ EM  
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G  P+ +TY+S++  LC++  VD+A+ LL +++    RP + +Y I+I G C++ R+ +
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +  V   +  KG   +   Y ++I+G    G+  +A+ L
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALAL 503



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 212/417 (50%), Gaps = 17/417 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L K   P  F +N ++S   KA     A  +  ++   G   D  T+NI+I      G+
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              +F +F ++L+    PT IT+  LI+   L+G   +A+   D++              
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK G +  A Q ++ ++ +  QP+ + YNM++  +       +   L ++M+++ 
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + P+V TY+ LIS      K   A+D+    K++ + P+ Y+++ L+  +CK+G+++ A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M+ D   PD+V YN+++  +C     ++A +IF+ ++  G   NV  Y TM +  
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A+ +  EM  + I P+ +TY+SLI  LC+ G +  A+ L+ +M      P +
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++Y+ I+   CK   ++++I +L  + ++G +P+  TY +LI+G+   G   +A  +
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 193/386 (50%), Gaps = 18/386 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    + G+   +L  ++ +     +P+ VM   +I    + +  N A 
Sbjct: 162 FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAF 221

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  +++ K   PDVF YNALISGF   +++  A  + ++++    +P+V T+NI++   
Sbjct: 222 DLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGF 281

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  A  V   +++D+ KP V+TY  L+       + +KA  + D M         
Sbjct: 282 CKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK  MV +A      +  R   P+V++Y+ L+  L  +G+     KL+ E
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG  PN+VTYS ++ +LC++   + A+ +L   K++G+ PD Y+Y  LI   C+ GR
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A    + ++  G   D+  Y  ++  FC  G  D+AL +  K+ D GC PN  +Y  
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  +L+   +   A  ++ EM+ +G+
Sbjct: 522 VILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 19/431 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LIK     G   ++L+F + +VA G   D V    LI    +  +   A+++++ ++
Sbjct: 134 FNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 193

Query: 100 -KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K  +P+   YN +I   CKA  +  A  +  ++ ++   PDV TYN +I    +   + 
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F+++ ++N  P V T+ IL+                   G CK+G V  A   + 
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVD------------------GFCKEGKVNDAKVVLA 295

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +     +PDV++YN L+    ++ K  + + +   M S G+  NV  Y+ +++  C+  
Sbjct: 296 IMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A+++    + + + P+  +Y  LI   CK GR+  A++ +D M   G  P+IV Y+
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +IL A CKN + D+A+ +   L D G  P++ +Y  +   L  SG    A  +  ++L K
Sbjct: 416 SILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK 475

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G   D   Y  +I   C  G  D+A+ LL  ME     P   +Y ++IL   +    + +
Sbjct: 476 GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTA 535

Query: 459 IEVLAAMFEKG 469
            ++L  M  +G
Sbjct: 536 EKLLREMIVRG 546



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 18/298 (6%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K + ++     M      P+V     L+  F +E K N A  V+ I+ K   +PDV  YN
Sbjct: 251 KLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYN 310

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +L+ G+C  N++  A  + D + S G   +V  Y  M+   C   M++ A  +F+++   
Sbjct: 311 SLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCR 370

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P V+TY+ LI      G+   A+KL+DEM                  +CK   V +A
Sbjct: 371 KIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKA 430

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              + +L+ +G +PD+ +Y +L++ L   G+ E+ + +  +++ +G   +V  Y+++I  
Sbjct: 431 IALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQG 490

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            C  G  + A+ +L   ++ G  P+A +Y+ +I +  +    D A + L  MI  G L
Sbjct: 491 FCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 90/192 (46%)

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +D   +L   F   ++     P    +N IL++  K  +   AL + +++   G   +  
Sbjct: 38  QDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFF 97

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N + +     G    +  + +++L KG  P  IT+N+LI  LC  G + +A+     +
Sbjct: 98  TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV 157

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
            +  F    +SY  +I G CK  RI  ++++L  +  K  +PN   Y ++I+ +      
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 217

Query: 491 AEAMELANALVS 502
            +A +L + +V+
Sbjct: 218 NDAFDLYSQMVA 229


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 217/409 (53%), Gaps = 23/409 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKY 101
           LI+    A + D+++  +  M  +G +P+VV+ + L++ + +  +     +V +E+ EK 
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPDV  Y  LI   CK  + + A+ V+D +  RG  P+VVTYN++I  +C  G ++ A 
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------- 202
            V  ++      P V+TY  LI+      + D+AM LL+EM                   
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C  G + QAFQ    +E  GC  ++++YN+L+  LL + K  +  +LM EM S GLEP
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +  TYSILI   C+  + + A D+L   +++G+ P+ + Y PL+ A C+ G ++ A    
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF 455

Query: 323 DYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           + M  D   P D+V Y+T++   CK G+   A E+ + + D G  P+  +Y+ + +    
Sbjct: 456 NEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           SGD   A G++ +M + G  PD   ++SLI      G +++ + L+ +M
Sbjct: 514 SGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 224/453 (49%), Gaps = 24/453 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           D+++  + SM + G + DVV    LI+      + +KAV +M E+ E   EP+V  Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           + G+CK+ + E   KV   +  +G  PDVV Y  +I SLC  G  + A  V D ++R   
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +P V+TY +LI                    MCK+G V +A   ++ +  +G  PDV++Y
Sbjct: 252 EPNVVTYNVLINC------------------MCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRG---LEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           N L++ L ++ + +E   L+ EM+ RG   ++PNVVT++ +I  LC  G+   A  V   
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +E G   +  +Y+ LI    +  ++  A+E +D M S G  PD   Y+ ++  FCK   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A ++   + D G  P +  Y  +  A+   G   RA  + +EM       D + Y++
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYST 471

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C+ G +  A  LL  +      P  ++Y+I+I  F K+  +  +  VL  M   G
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+   +  LI+G    G   + +EL   +++
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMIT 564



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 193/364 (53%), Gaps = 26/364 (7%)

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD---NCKPTVITYTI 181
           A  +LD L S     D V+YN ++ +LC RG  + A  +   +  +    C+P  ++YT+
Sbjct: 64  ATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L++A                  +C   +  QA   +RS+ S G + DV++Y  L+R L +
Sbjct: 121 LMRA------------------LCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCD 162

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             + ++  +LM EM   G+EPNVV YS L+   C+ G+ ED   V     EKG+ PD   
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVM 222

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI + CK G+   A   +D M+  G  P++V YN ++   CK G+  +A+ + +K+S
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGM 419
           + G  P+V +YNT+   L    +   A+ ++ EM+     ++P+ +T+NS+I  LC  G 
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + +A  +   ME T     +++YN++I G  +  ++ +++E++  M   G +P+  TY +
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402

Query: 480 LIEG 483
           LI+G
Sbjct: 403 LIKG 406



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 201/434 (46%), Gaps = 58/434 (13%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+  +Y  L+   C     + A  +L  +RS G   DVVTY  +I  LC    ++ A ++
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++     +P V+ Y+ L+Q                  G CK G      +    +  +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQ------------------GYCKSGRWEDVGKVFVEMSEK 214

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PDV+ Y  L+ +L  +GK ++   +M  M+ RGLEPNVVTY++LI+ +C++G  ++A
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTIL 341
           + VL+   EKG+ PD  +Y+ LI        +D A+  L+ M+    +  P++V +N+++
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI 334

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C  G   QA ++   + + GC  N+ +YN +   L       +A+ ++ EM S G+E
Sbjct: 335 QGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE 394

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT----------------------- 438
           PD  TY+ LI   C+   VD A  LL  M      P                        
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454

Query: 439 -----------VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
                      V++Y+ +I G CK   +  + E+L ++ ++G  P+  TY ++I      
Sbjct: 455 FNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 488 GWRAEAMELANALV 501
           G     ME AN ++
Sbjct: 515 G----DMEAANGVL 524



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 44/342 (12%)

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---SRGLEPNVVT 266
           +G+A   + +L S     D +SYN +L  L   G  +    L+  M         PN V+
Sbjct: 61  LGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++L+ +LC D   + AV +LR+ +  G+  D  +Y  LI   C    +D A+E +  M 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P++V Y+++L  +CK+G  +   ++F ++S+ G  P+V  Y  +  +L   G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM---------------- 430
           +A G++  M+ +G+EP+ +TYN LI+C+C++G V EA+G+L  M                
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 431 -----------------ESTR----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
                            E  R     +P V+++N +I G C   R+ ++ +V A M E G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           C  N  TY LLI G+       +AMEL + + S+  +  D+F
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL-GLEPDSF 398



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 157/377 (41%), Gaps = 89/377 (23%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++   ++G++++       M   G +PDVVM T LI    +  K+ KA  VM+++ 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL------- 151
           + G EP+V  YN LI+  CK   ++ A  VL ++  +G +PDVVTYN +I  L       
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 152 ------------------------------CSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
                                         C  G +  AF+V   +    C   ++TY +
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI   +   +  KAM+L+DEM                 G CK   V +A   + ++  RG
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 225 CQP----------------------------------DVISYNMLLRTLLNMGKWEEGEK 250
            +P                                  DV++Y+ ++      G  +  ++
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+  ++  GL P+ VTYSI+I+   + G  E A  VL+     G  PD   +D LI  Y 
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 311 KDGRLDLAIEFLDYMIS 327
             G ++  +E +  MI+
Sbjct: 548 TKGEINKVLELIREMIT 564


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 233/480 (48%), Gaps = 18/480 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
            K  ++L ++  M   GC PD V    ++    + R   +A  ++  ++  G  P+   Y
Sbjct: 227 SKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTY 286

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+ G+C+   ++ A KV++ +      P V TYN+++   C+ G I+ AF++ D++ +
Sbjct: 287 NMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEK 346

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQ 212
            N  P V+TY  LI        + +   L++EM                  MCKKG + +
Sbjct: 347 MNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTE 406

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +E  G  PD ++YN L+      GK  +  ++M EM S+GL+ +  T + ++ 
Sbjct: 407 ATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILH 466

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC + K ++A ++L +A ++G   D  SY  LI  Y KD + D A+   D M     +P
Sbjct: 467 CLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMP 526

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + YN+++   C++   DQA++   ++ + G  P+ ++YN +       G+  +A    
Sbjct: 527 STITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFH 586

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           +EM+    +PD  T N L+  LCR+GM+++A+ L   + S      V++YN II   CK 
Sbjct: 587 NEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKE 646

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
            +   + ++L  M  K   P++ TY ++I  +   G   EA E    +V    +     K
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLK 706



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 210/437 (48%), Gaps = 19/437 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P+      LI  +  E K   A+  +  + ++G  PD  +YN ++    K   ++ A
Sbjct: 208 GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA 267

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L  ++S+G SP+  TYN+++   C  G+++ A KV + + R+N  PTV TY +L+  
Sbjct: 268 RDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVN- 326

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G C  G + +AF+    +E     PDV++YN L+         
Sbjct: 327 -----------------GFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDS 369

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E   L+ EM  +G++ N VTY+I++  +C+ G   +A   L   +E GL+PD  +Y+ L
Sbjct: 370 SEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTL 429

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I AYCK G++  A   +D M S G   D    NTIL   C     D+A  +    S  G 
Sbjct: 430 IGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGY 489

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  SY  +    +      RAL +  EM  + I P  ITYNS+I  LC+   VD+A+ 
Sbjct: 490 ILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAID 549

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L +M      P   +YNIII GFC    + ++ +    M E   KP+  T  +L+ G+ 
Sbjct: 550 KLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLC 609

Query: 486 YGGWRAEAMELANALVS 502
             G   +A++L N LVS
Sbjct: 610 REGMLEKALKLFNTLVS 626



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 221/477 (46%), Gaps = 41/477 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R G   E+   IE M  N   P V     L+  F  + K ++A R+ + +EK    PDV 
Sbjct: 295 RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVV 354

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G  +         +++ +  +G   + VTYNI++  +C +G +  A    D++
Sbjct: 355 TYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM 414

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
             +   P  +TY  LI A    G+  KA +++DEM                  +C +  +
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A+  + S   RG   D +SY +L+       K +    L  EM  R + P+ +TY+ +
Sbjct: 475 DEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  K + A+D L    E GL PD  +Y+ +I  +C +G ++ A +F + MI +  
Sbjct: 535 IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF 594

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+   N +L   C+ G  ++AL++F  L   G   +V +YNT+ S+L   G    A  
Sbjct: 595 KPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYD 654

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEA---------VGLLVDME---------- 431
           +++EM +K + PD+ TY  +I+ L   G + EA          G++ D            
Sbjct: 655 LLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVL 714

Query: 432 ----STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               S  F    I+Y+  I   C   +  +++ +   + ++G   N+ TY+ L+EG+
Sbjct: 715 TSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 194/445 (43%), Gaps = 41/445 (9%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK DE+    + M      PDVV    LI    Q R S++   ++E ++K G + +   Y
Sbjct: 332 GKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTY 391

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++   CK   +  A   LD++   G SPD VTYN +IG+ C  G +  AF++ D++  
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLL----------DE-------MGMCKKGMVGQ 212
              K    T   ++    +E + D+A  LL          DE       +G  K     +
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      ++ R   P  I+YN ++  L    K ++    + EM+  GL P+  TY+I+I 
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIH 571

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C +G  E A        E    PD Y+ + L+   C++G L+ A++  + ++S G   
Sbjct: 572 GFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDI 631

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+V YNTI+++ CK G  + A ++  ++      P+  +Y  + +AL  +G    A    
Sbjct: 632 DVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFT 691

Query: 393 SEMLSKGIEPDE-----------------------ITYNSLISCLCRDGMVDEAVGLLVD 429
            +M+  GI  D+                       I Y+  I+ LC      +A+ L V+
Sbjct: 692 LKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVE 751

Query: 430 MESTRFRPTVISYNIIILGFCKTRR 454
           +          +Y  ++ G  K R+
Sbjct: 752 VTKEGVALNKYTYLNLMEGLIKRRK 776



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 47/315 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C+  K +E   +  SA  R       + + E  +  LI   F+  K D +L   + M   
Sbjct: 469 CVEKKLDEAYNLLCSASKR------GYILDEVSYGILILGYFKDEKGDRALNLWDEMKER 522

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELA 125
              P  +    +I    Q RK ++A+ ++ E+LE    PD   YN +I GFC    +E A
Sbjct: 523 QIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKA 582

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +  + +    F PDV T NI++  LC  GM+E A K+F+ L+       V+TY  +I +
Sbjct: 583 FQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISS 642

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ + A  LL EM                  +   G + +A +F   +   G   D
Sbjct: 643 LCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702

Query: 229 -----------------------VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                                   I+Y+  +  L N  K+++   L  E+   G+  N  
Sbjct: 703 QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKY 762

Query: 266 TYSILISSLCRDGKT 280
           TY  L+  L +  K+
Sbjct: 763 TYLNLMEGLIKRRKS 777



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 41/261 (15%)

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S+LIS +  D + E    +L   ++    P     D  I AY +  +  LA +  + M  
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLP-EPSKELLDTSIGAYVQMDQPHLATQIFNKMKR 168

Query: 328 DGCLPDIVNYNTILAA--------------------------------------FCKNGN 349
               P+++  NT++ +                                      +C    
Sbjct: 169 LNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESK 228

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              AL+   K+S+ GC P+  SYNT+  AL        A  ++ +M SKG+ P++ TYN 
Sbjct: 229 VKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNM 288

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+   CR G++ EA  ++  M      PTV +YN+++ GFC   +I+E+  +   M +  
Sbjct: 289 LVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMN 348

Query: 470 CKPNETTYVLLIEGIGYGGWR 490
             P+  TY  LI+G     WR
Sbjct: 349 VLPDVVTYNTLIDGC--SQWR 367



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 3/162 (1%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW---SSGDKIRALGMISE 394
           +T + A+ +      A +IF K+  +   PN+ + NT+ ++L    SS   + A  ++ +
Sbjct: 144 DTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKD 203

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
            +  G+ P+  ++N LI   C +  V +A+  +  M      P  +SYN I+    K R 
Sbjct: 204 SIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRL 263

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + E+ ++L  M  KG  PN+ TY +L+ G    G   EA ++
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV 305


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 238/522 (45%), Gaps = 62/522 (11%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L   + M+ NG  PDV  C ++++    E   +KA  V  ++E++G +P V  YN ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           +CK  +++ A ++L  ++ RG  P+ VTYN+++  L  +G +E A  + +++L      +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM--------------------------------- 202
             TY  LI     +G   +A  L++EM                                 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 203 -------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G C+ G + +AF     L+ R   P VI+YN L+  L   G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             +   +L  EM  +GL P++ TY+IL++   + G    A         KGL PD ++Y+
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             I    K     +A    + M++ G  PD++ YN  + A C+ GN ++A ++ E +   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  +Y ++ +    +G   +A  + +EMLSKG+ P  +TY  LI       M+D A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI-E 482
                 M        VI+YN II G C TRR++E+ +    M EKG  PN+ +Y +LI E
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTF------KRLNRTF 518
               G W  EA+ L   ++    I  D+F      K L+R +
Sbjct: 645 SCNMGYWE-EALRLYREMLD-RKIQPDSFTHSVFLKNLHRDY 684



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 22/456 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+ +++   IE M+ +G          LI  F Q+    +A  ++E ++ +   P + 
Sbjct: 262 KKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321

Query: 108 AYNALISGFCKANQIE-LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN L+ G CK  Q+  +  +  D L+S+ F+PD+V++N ++   C  G I  AF +FD+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSK-FTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           L   +  PTVITY  LI    + G  D A++L  EM                    +G  
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM------------------TDQGLF 422

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD+ +Y +L+     +G          EM+S+GL+P+   Y+  I    +   T  A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  PD  +Y+  + A C+ G  + A + L+ M+SDG +PD V Y +I+  F K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG+  +A E+F ++   G  P+V +Y  +  A  +      A    S+ML K +  + IT
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN++I+ LC    +DEA     +ME     P   SY I+I   C      E++ +   M 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  +P+  T+ + ++ + +  ++  A++   +L+ 
Sbjct: 663 DRKIQPDSFTHSVFLKNL-HRDYQVHAVQCVESLIQ 697



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 184/405 (45%), Gaps = 18/405 (4%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK-SNKAV 92
           +V    +  LI    + G F E+   +E MV     P +     L+    +  + +   +
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R  ++L+    PD+ ++N+L+ G+C+   I  A  + D L+ R   P V+TYN +I  LC
Sbjct: 342 RFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G +++A ++  ++      P + TYTIL+      G    A    +EM          
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G  K      AF     + + G  PDVI+YN+ +  L   G +EE   L+  M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +S GL P+ VTY+ +I+   ++G    A +V      KG+ P   +Y  LI A+     L
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           DLA  +   M+      +++ YN I+   C     D+A + F+++ + G  PN  SY  +
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            +   + G    AL +  EML + I+PD  T++  +  L RD  V
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV 686



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L +F+K+   G  P+V + N +   L       +A  +   M   GI+P  +TYN+++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            C++G VD+A+ LL +M+     P  ++YN+++ G  K   + ++  ++  M   G   +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
             TY  LI G    G   EA +L   +V+             R FP L  Y  + +
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVN------------RRAFPTLSTYNTLMY 328



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 67/118 (56%)

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            +  L +  +M+  G+ PD    N ++  L  + ++ +A  +   ME    +PTV++YN 
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  +CK  R+++++E+L+ M E+GC PN+ TY +L+ G+   G   +A  L   +++
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 228/445 (51%), Gaps = 28/445 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCK-----PDVVMCTKLIKKFFQERKSNKAVRV 94
           F  ++    +AG  D +L F   +V  G K     P+V+    +IK   +    + A+ +
Sbjct: 146 FNSVLNVIIQAGFHDRALEFYNHVV--GAKDMNILPNVLSFNLIIKSMCKLGLVDNAIEL 203

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
             E+  +   PD + Y  L+ G CK ++I+ A  +LD ++  G  P   T+N++I  LC 
Sbjct: 204 FREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCK 263

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           +G      K+ D +    C P  +TY  LI    L+G+ DKA+ LLD M           
Sbjct: 264 KGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRM----------- 312

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   S  C P+ ++Y  ++  L+  G+  +G +++  M  RG   N   YS+L+S 
Sbjct: 313 -------VSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L ++GK+E+A+ + + + +KG   +   Y  L+   C+D + D A++ L  M   GC P+
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              +++++  F + GN+ +A+E+++ ++ + C  N   Y+ +   L   G  + A+ + +
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWA 485

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR--FRPTVISYNIIILGFCK 451
           +ML+ G  PD + Y+S+I  LC  G V+EA+ L  +M       +P VI+YNI+    CK
Sbjct: 486 KMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCK 545

Query: 452 TRRINESIEVLAAMFEKGCKPNETT 476
              I+ ++++L +M ++GC P+  T
Sbjct: 546 QSSISRAVDLLNSMLDRGCDPDLVT 570



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 230/449 (51%), Gaps = 26/449 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKAN----QIELANKVLDR 131
           + K + +    NKA+ +   +  E Y +P V ++N++++   +A      +E  N V+  
Sbjct: 113 MFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGA 172

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
            +     P+V+++N++I S+C  G++++A ++F ++    C P   TY  L+       +
Sbjct: 173 -KDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDR 231

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            D+A+ LLDEM                 G+CKKG   +  + V ++  +GC P+ ++YN 
Sbjct: 232 IDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNT 291

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  L   GK ++   L+  M+S    PN VTY  +I+ L + G+  D   VL   +E+G
Sbjct: 292 LIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              + Y Y  L+S   K+G+ + A+      +  GC  + V Y+ ++   C++   D+A+
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           +I  +++D GC PN  +++++    +  G+  +A+ +  +M       +E+ Y+ LI  L
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM--FEKGCKP 472
           C+DG V EA+ +   M +T  RP V++Y+ +I G C    + E++++   M   E   +P
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  TY +L   +      + A++L N+++
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSML 560



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 174/407 (42%), Gaps = 38/407 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    + G F      +++M   GC P+ V    LI     + K +KA+ +++ ++
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P+   Y  +I+G  K  +     +VL  +  RG+  +   Y++++  L   G  E
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++F + +   CK   + Y+ L+     + + D+AMK+L EM                
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  + G   +A +  + +    C  + + Y++L+  L   GK  E   +  +M++ G  
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRA--AKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           P+VV YS +I  LC  G  E+A+ +       E    PD  +Y+ L +A CK   +  A+
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAV 553

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS--YNTMFS 377
           + L+ M+  GC PD+V  N  L              + EKL     PP   +   + +  
Sbjct: 554 DLLNSMLDRGCDPDLVTCNIFLRM------------LREKLD----PPQDGAKFLDELVV 597

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
            L      + A  ++  ML K + P   T+  ++  LC+   +   +
Sbjct: 598 RLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVI 644



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 41/292 (14%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  +  L+   F+ GK +E++   +  +  GCK + V+ + L+    ++RK ++A+++
Sbjct: 354 VNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKI 413

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + E+ +K   P+ F +++L+ GF +      A +V   +     + + V Y+++I  LC 
Sbjct: 414 LSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCK 473

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G +  A  V+ ++L   C+P V+ Y+ +IQ     G  ++A+KL +EM           
Sbjct: 474 DGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDV 533

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-NMGKWEEGEKLMT 253
                    +CK+  + +A   + S+  RGC PD+++ N+ LR L   +   ++G K + 
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLD 593

Query: 254 E--------------------MISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           E                    M+ + L P   T++ ++  LC+  K +  +D
Sbjct: 594 ELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVID 645


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 234/450 (52%), Gaps = 22/450 (4%)

Query: 56  SLYFIESMV--ANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           +L  + +MV  + GC P+VV    +I  FF+E + +KA  +  E++++   PDV  Y++ 
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I   CKA  ++ A  VL ++ S GF PD VTYN MI      G  +    +F ++ R   
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P + T    + +                  +CK G   +A +F  S+ ++G +PD+++Y
Sbjct: 329 MPDIFTCNSYMSS------------------LCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           ++LL      G   +   L   M   G+  +   Y+ILI +  + G  ++A+ +    +E
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+ PDA++Y  +I+A+ + GRL  A++  + MI+ G  PD + YN+++  FC +GN  +
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVK 490

Query: 353 ALEIFEKLSDVGCP-PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           A E+  ++   G P PN   +N++ ++L   G  + A  +   ++  G  PD IT+NSLI
Sbjct: 491 AKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                 G +++A G+L  M S    P V++Y+ ++ G+C+  RI++ + +   M  KG K
Sbjct: 551 DGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVK 610

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P   TY +++ G+   G    A ++ + ++
Sbjct: 611 PTTITYGIILHGLFNDGRTVGAKKMCHEMI 640



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 228/442 (51%), Gaps = 23/442 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM--EILEKYGEPDVFAYNALISGFCKANQIEL 124
           G K DV++   L+K     ++S+ AV V+   + E   EPD  +Y+ ++   C+ ++ + 
Sbjct: 149 GLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR 208

Query: 125 ANKVLDRL--RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           A  +L  +  +S G SP+VV+YN +I      G +  A  +F ++++    P V+TY+  
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I A                  +CK   + +A   +R + S G +PD ++YN ++     +
Sbjct: 269 IDA------------------LCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSIL 310

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+W+E   +  EM  RGL P++ T +  +SSLC+ GK+++A +   +   KG  PD  +Y
Sbjct: 311 GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             L+  Y  +G +   +   + M  +G + D   YN ++ A+ K G  D+A+ IF ++ +
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  P+  +Y T+ +A    G    A+   ++M++ G++PD I YNSLI   C  G + +
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVK 490

Query: 423 AVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           A  L+ +M S    RP  + +N II   CK  R+ E+ ++   +   G +P+  T+  LI
Sbjct: 491 AKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550

Query: 482 EGIGYGGWRAEAMELANALVSM 503
           +G G  G   +A  + +A++S+
Sbjct: 551 DGYGLVGKMEKAFGVLDAMISV 572



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 222/495 (44%), Gaps = 36/495 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+  F +SM A G KPD+V  + L+  +  E      + +   +E  G   D  
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI  + K   ++ A  +  +++ RG  PD  TY  +I +    G +  A   F+Q+
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    KP  I Y  LIQ   + G   KA +L+ EM                   +CK+G 
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A      +   G +PDVI++N L+     +GK E+   ++  MIS G+EP+VVTYS 
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+   CR+G+ +D + + R    KG+ P   +Y  ++     DGR   A +    MI  G
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              DI     IL   C+N   D+A+ +F+KL  +    N++  NTM  A++    +  A 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   + + G+ P+  TY  +I+ L ++G V+EA  +   ME +   P+           
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPS----------- 752

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
             +R +N  I VL    EKG       Y+  ++G       A    L  +L S     R+
Sbjct: 753 --SRLLNNIIRVL---LEKGEISKAGNYLSKVDGKTI-SLEASTASLMLSLFSRKGKYRE 806

Query: 510 TFKRLNRTFPLLDVY 524
             K L   +   D +
Sbjct: 807 QIKSLPAMYQFFDEF 821



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 17/400 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  YN L+   C+A++  +   +  R    G   DV+  NI++  LC     + A  V
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 164 FDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
               + +   +P  I+Y+ ++++   + ++ +A+ LL  M   KK              S
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTM--VKK--------------S 220

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P+V+SYN ++      G+  +   L  EM+ +G+ P+VVTYS  I +LC+    + 
Sbjct: 221 GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDK 280

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VLR     G  PD  +Y+ +I  Y   G+          M   G +PDI   N+ ++
Sbjct: 281 AELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMS 340

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           + CK+G + +A E F+ ++  G  P++ +Y+ +     + G  +  L + + M   GI  
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   YN LI    + GM+DEA+ +   M+     P   +Y  +I  F +  R+ ++++  
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M   G KP+   Y  LI+G    G   +A EL + ++S
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 20/385 (5%)

Query: 122 IELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + L N++  +  R R   P V TYNI++   C        F +F + L+   K  VI   
Sbjct: 99  VALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVAN 158

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           IL++      ++D A+ +L                 +  +   G +PD ISY+ +L++L 
Sbjct: 159 ILLKCLCHAKRSDDAVNVL-----------------LHRMPELGVEPDTISYSTVLKSLC 201

Query: 241 NMGKWEEGEKLMTEMI--SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
              + +    L+  M+  S G  PNVV+Y+ +I    R+G+   A ++     ++G+ PD
Sbjct: 202 EDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPD 261

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y   I A CK   +D A   L  MIS+G  PD V YN ++  +   G   +   +F 
Sbjct: 262 VVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFR 321

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +++  G  P++ + N+  S+L   G    A      M +KG +PD +TY+ L+     +G
Sbjct: 322 EMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEG 381

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            V + + L   ME          YNI+I  + K   ++E++ +   M E+G  P+  TY 
Sbjct: 382 YVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYG 441

Query: 479 LLIEGIGYGGWRAEAMELANALVSM 503
            +I      G  A+AM+  N +++M
Sbjct: 442 TVIAAFSRMGRLADAMDKFNQMIAM 466


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 233/499 (46%), Gaps = 25/499 (5%)

Query: 23  ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
           E  P  ++ +F++       +I    + G   E+   +  M A GC PDVV    LI  +
Sbjct: 187 EQLPAPNVFTFNI-------MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGY 239

Query: 83  FQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
            +  +  +  +++  +   G  PDV  YNAL++ FCK  ++E A      ++  G   +V
Sbjct: 240 GKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANV 299

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           VT++  + + C  GM+  A K+F Q+     KP  +TYT L+  T   G+ D A+ L +E
Sbjct: 300 VTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNE 359

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK+G V +A    R +E  G + + + Y  L+        
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            E    L++EM  +G+E +V  Y  LI  LC   K ++A  +L    E GL P+   Y  
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           ++ A  K  +   AI  L  M+  G  P+IV Y  ++   CK G+ D+A+  F K+ D+G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             PNV +Y  +   L  +G   +A+ ++ EM+ KG+  D +   SL+    + G + +A 
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L   M ++  +  +  Y   + GFC    I E+ EVL+ M E G  P+   Y  LI   
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659

Query: 485 GYGGWRAEAMELANALVSM 503
              G   EA  L N + S+
Sbjct: 660 QKLGNMEEAAILQNEMESL 678



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 20/450 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G  D+++  +  +      P+   C  ++    +ER S  A R+ E L     P+VF +N
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA---PNVFTFN 198

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK   +  A  +L R+++ G SPDVVTYN +I      G +E   K+  ++   
Sbjct: 199 IMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGC 258

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P V+TY  L+      G+ ++A     EM                   CK GMV +A
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREA 318

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  +G +P+ ++Y  L+      G+ ++   L  EM+ +G+  NVVTY++L+  
Sbjct: 319 MKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDG 378

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++GK  +A DV R  +  G+  +   Y  LI  +      + A+  L  M   G   D
Sbjct: 379 LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELD 438

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y  ++   C     D+A  +  K+ + G  PN   Y  +  A + +  +  A+ ++ 
Sbjct: 439 VSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQ 498

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +M+  G  P+ +TY +L+  LC+ G +DEA+     M      P V +Y  ++ G CK  
Sbjct: 499 KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           R+++++ +L  M +KG   +      L++G
Sbjct: 559 RLDKAVLLLDEMIDKGMSLDNVVCTSLMDG 588



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 231/516 (44%), Gaps = 47/516 (9%)

Query: 13  NERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPD 71
           ++R+R+  S +  P  HLLS  +  +  + L      RA  F  S   +  ++A G  P 
Sbjct: 45  SDRLRLLHSLQAVPADHLLSHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPH 104

Query: 72  VVMC-TKLIKKF---FQERKS--------------------NKAVRVMEILEKYGEPDVF 107
           +      L+ +       R+S                    +  + +  + E    P+  
Sbjct: 105 LAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTR 164

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N ++    +    ELA ++ ++L +    P+V T+NIMI  LC  G +  A  +  ++
Sbjct: 165 TCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARM 220

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C P V+TY  LI      G+ ++  KL+ EM  C                  GC+P
Sbjct: 221 KAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGC------------------GCRP 262

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++YN L+      G+ E       EM   G+  NVVT+S  + + C++G   +A+ + 
Sbjct: 263 DVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLF 322

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              + KG+ P+  +Y  L+   CK GRLD A+   + M+  G   ++V Y  ++   CK 
Sbjct: 323 AQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKE 382

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A ++F  +   G   N   Y T+    +   +  RAL ++SEM  KG+E D   Y
Sbjct: 383 GKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLY 442

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +LI  LC    +DEA  LL  M+    +P  + Y  I+    K R+ +E+I +L  M +
Sbjct: 443 GALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMD 502

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            G +PN  TY  L++G+   G   EA+   N +V +
Sbjct: 503 SGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 223/446 (50%), Gaps = 20/446 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+   +  M   GC PDV+  + +I  + Q  +  + ++++E ++  G +P+ + Y
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   CK  ++  A +VL  + S G +PD V Y  +I   C  G + SA+++FD++ +
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P  ITYT +I      G+  +A KL  EM                 G CK+G + +
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF     +   G  P++++Y  L   L   G+ +   +L+ EM  +GLE N+ TY+ L++
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G  + AV +++  +  G  PDA +Y  L+ AYCK   +  A E L  M+     P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V +N ++  FC +G  +   ++ + + + G  PN ++YN++    +   + +RA   I
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ-YCIRNNMRATTEI 625

Query: 393 SE-MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M +KG+ PD  TYN LI   C+   + EA  L  DM    F  TV SYN +I GF K
Sbjct: 626 YRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYK 685

Query: 452 TRRINESIEVLAAMFEKGCKPNETTY 477
            ++  E+ E+   M  +G   +   Y
Sbjct: 686 RKKFLEARELFEQMRREGLVADREIY 711



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 196/380 (51%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV +Y+ +I+G+C+  +++   K+++ ++ +G  P+  TYN +I  LC  G +  A +V
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             +++ +   P  + YT LI                   G CK G V  A++    ++ R
Sbjct: 346 LREMISEGIAPDGVIYTTLID------------------GFCKLGNVSSAYRLFDEMQKR 387

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD I+Y  ++  L   G+  E +KL  EM+ + LEP+ VTY+ LI   C++GK ++A
Sbjct: 388 KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 447

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +     + GLTP+  +Y  L    CK G +D A E L  M   G   +I  YN+++  
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 507

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK GN DQA+++ + +   G  P+  +Y T+  A   S + +RA  ++ +ML + ++P 
Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+N L++  C  GM+++   LL  M      P   +YN +I  +C    +  + E+  
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  P+  TY +LI+G
Sbjct: 628 GMCAKGVVPDGNTYNILIKG 647



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 185/367 (50%), Gaps = 18/367 (4%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           I++A KV       G   +  +YNI+  SLC  G +  A ++  Q+    C P VI+Y+ 
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           +I      G+  + +KL++EM                  + +G +P+  +YN ++  L  
Sbjct: 294 VINGYCQVGELQRVLKLIEEM------------------QIKGLKPNPYTYNGVILLLCK 335

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            GK  E E+++ EMIS G+ P+ V Y+ LI   C+ G    A  +    +++ ++PD  +
Sbjct: 336 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 395

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I   C+ GR+  A +    M+     PD V Y  ++  +CK G   +A  +  ++ 
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 455

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
            +G  PN+ +Y  +   L   G+   A  ++ EM  KG+E +  TYNSL++ LC+ G +D
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +AV L+ DME   F P  ++Y  ++  +CK+R +  + E+L  M ++  +P   T+ +L+
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 575

Query: 482 EGIGYGG 488
            G    G
Sbjct: 576 NGFCMSG 582



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 18/378 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+   +  M++ G  PD V+ T LI  F +    + A R+ + ++K    PD  
Sbjct: 335 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y A+I G C+  ++  A+K+   +  +   PD VTY  +I   C  G ++ AF + +Q+
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L+    P ++TYT L       G+ D A +LL EM                 G+CK G +
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA + ++ +E  G  PD ++Y  L+       +     +L+ +M+ R L+P VVT+++L
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C  G  ED   +L+   EKG+ P+A +Y+ LI  YC    +    E    M + G 
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD   YN ++   CK  N  +A  +   +   G    VSSYN +    +     + A  
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694

Query: 391 MISEMLSKGIEPDEITYN 408
           +  +M  +G+  D   YN
Sbjct: 695 LFEQMRREGLVADREIYN 712



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 168/336 (50%), Gaps = 8/336 (2%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF-----QFVRSLESRGCQPD 228
           P++    I+ Q          A KL+ +  +     VG +F     Q + + +  G  P 
Sbjct: 124 PSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPR 183

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD-GKTEDAVDVL 287
           V  +++  + L+  G  +E  KL  +M++ GL  +V + ++ IS L  D    + A+ V 
Sbjct: 184 V--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVF 241

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E G+  +  SY+ +  + C+ GR+  A + L  M   GC+PD+++Y+T++  +C+ 
Sbjct: 242 VEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQV 301

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   + L++ E++   G  PN  +YN +   L  +G    A  ++ EM+S+GI PD + Y
Sbjct: 302 GELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY 361

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +LI   C+ G V  A  L  +M+  +  P  I+Y  +I G C+T R+ E+ ++   M  
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 421

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           K  +P+E TY  LI+G    G   EA  L N ++ M
Sbjct: 422 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 1/298 (0%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-NMGKWEEGEKLMTEMISRGLEP 262
           + + GM+ +A +    + + G    V S N+ +  L  ++   +   K+  E    G+  
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  +Y+I+  SLC+ G+  +A  +L   + +G  PD  SY  +I+ YC+ G L   ++ +
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   G  P+   YN ++   CK G   +A  +  ++   G  P+   Y T+       
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G+   A  +  EM  + I PD ITY ++I  LC+ G V EA  L  +M   R  P  ++Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +I G+CK  ++ E+  +   M + G  PN  TY  L +G+   G    A EL + +
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 19/339 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI    + GK  E+      M+  G  P++V  T L     +  + + A  ++ 
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+  K  E +++ YN+L++G CKA  I+ A K++  +   GF PD VTY  ++ + C   
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A ++  Q+L    +PTV+T+ +L+                   G C  GM+    +
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMN------------------GFCMSGMLEDGEK 589

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            ++ +  +G  P+  +YN L++            ++   M ++G+ P+  TY+ILI   C
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +    ++A  + R    KG      SY+ LI  + K  +   A E  + M  +G + D  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            YN         G  +  LE+ ++  +     ++ + NT
Sbjct: 710 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 210/401 (52%), Gaps = 19/401 (4%)

Query: 84   QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
            Q  + N+A  ++ ++E  G  PDV +Y+ +I+G+C+  +++   K++++++ +G  P+  
Sbjct: 681  QLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSY 740

Query: 143  TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            TY  +IG LC    +  A + F +++     P  I YT L+                   
Sbjct: 741  TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVD------------------ 782

Query: 203  GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            G CK+G +  A +F   + SR   PDV++Y  ++     +G   E  KL  EM+ RGLEP
Sbjct: 783  GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP 842

Query: 263  NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            +++T++ L++  C+ G  +DA  V     + G +P+  +Y  LI   CK+G LD A E L
Sbjct: 843  DIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 902

Query: 323  DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
              M   G  P+I  YN+I+   CK+GN ++A+++  +    G   +  +Y T+  A   S
Sbjct: 903  HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962

Query: 383  GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            G+  +A  +++EML KG++P  +T+N L++  C  GM+++   LL  M +    P   ++
Sbjct: 963  GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022

Query: 443  NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            N ++  +C    +  +  +   M  +G +P+  TY  L++G
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 18/445 (4%)

Query: 51   GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
            G+ +E+ + +  M   G  PDV+  + +I  + +  + +K  +++E +++ G +P+ + Y
Sbjct: 683  GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTY 742

Query: 110  NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++I   C+  ++  A +    +  +G  PD + Y  ++   C RG I +A K F ++  
Sbjct: 743  GSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHS 802

Query: 170  DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             +  P V+TYT +I      G   +A KL  EM                 G CK G +  
Sbjct: 803  RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKD 862

Query: 213  AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            AF+    +   GC P+V++Y  L+  L   G  +   +L+ EM   GL+PN+ TY+ +++
Sbjct: 863  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922

Query: 273  SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             LC+ G  E+AV ++   +  GL  D  +Y  L+ AYCK G +D A E L  M+  G  P
Sbjct: 923  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982

Query: 333  DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             IV +N ++  FC +G  +   ++   +   G  PN +++N +        +   A  + 
Sbjct: 983  TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY 1042

Query: 393  SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             +M S+G+EPD  TY +L+   C    + EA  L  +M+   F  +V +Y+++I GF K 
Sbjct: 1043 KDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102

Query: 453  RRINESIEVLAAMFEKGCKPNETTY 477
            ++  E+ E+   M   G   ++  +
Sbjct: 1103 KKFVEAREIFDQMRRDGLAADKEIF 1127



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 18/378 (4%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            R  K  E+      M+  G  PD ++ T L+  F +      A +   E+  +   PDV 
Sbjct: 751  RICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVL 810

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             Y A+ISGFC+   +  A K+   +  RG  PD++T+  ++   C  G I+ AF+V + +
Sbjct: 811  TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHM 870

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            ++  C P V+TYT LI     EG  D A +LL EM                 G+CK G +
Sbjct: 871  IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 930

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             +A + V   E+ G   D ++Y  L+      G+ ++ ++++TEM+ +GL+P +VT+++L
Sbjct: 931  EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVL 990

Query: 271  ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
            ++  C  G  ED   +L     KG+ P+A +++ L+  YC    L  A      M S G 
Sbjct: 991  MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV 1050

Query: 331  LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             PD   Y  ++   C   N  +A  +F+++   G   +VS+Y+ +    +     + A  
Sbjct: 1051 EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEARE 1110

Query: 391  MISEMLSKGIEPDEITYN 408
            +  +M   G+  D+  ++
Sbjct: 1111 IFDQMRRDGLAADKEIFD 1128



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 190/395 (48%), Gaps = 20/395 (5%)

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             Y A +S  C  N+   A  V       G   +V +YNI+I  +C  G I  A  +   +
Sbjct: 638  VYLARLSKDC--NKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLM 695

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                  P VI+Y+ +I      G+ DK  KL+++M                  + +G +P
Sbjct: 696  ELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM------------------KQKGLKP 737

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +  +Y  ++  L  + K  E E+  +EMI +G+ P+ + Y+ L+   C+ G    A    
Sbjct: 738  NSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFF 797

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 + +TPD  +Y  +IS +C+ G +  A +    M+  G  PDI+ +  ++  +CK 
Sbjct: 798  YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKA 857

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            G+   A  +   +   GC PNV +Y T+   L   GD   A  ++ EM   G++P+  TY
Sbjct: 858  GHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 917

Query: 408  NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            NS+++ LC+ G ++EAV L+ + E+       ++Y  ++  +CK+  ++++ E+L  M  
Sbjct: 918  NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG 977

Query: 468  KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            KG +P   T+ +L+ G    G   +  +L N +++
Sbjct: 978  KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 18/307 (5%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F +L+    +AG   ++      M+  GC P+VV  T LI    +E   + A  ++  + 
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G +P++F YN++++G CK+  IE A K++    + G + D VTY  ++ + C  G ++
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A ++  ++L    +PT++T+ +L+    L G  +   KLL+ M                
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 203  -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               C +  +  A    + + SRG +PD  +Y  L++   N    +E   L  EM  +G  
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             +V TYS+LI    +  K  +A ++    +  GL  D   +D       K  R D  ++ 
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDP 1146

Query: 322  LDYMISD 328
            +D +I +
Sbjct: 1147 IDEIIEN 1153


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 210/425 (49%), Gaps = 20/425 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +E+ +   + +V +YN L+   C A ++E A ++ D + S    PDVVTY I+I   C+
Sbjct: 250 AIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCA 306

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G +E+A K+ D ++    +P    YT ++     +G+   A+ ++++M           
Sbjct: 307 LGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAV 366

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C KG +  A ++   ++ +G   D ++Y  L+  L   G+ +E EK++ EM+
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           +R L+ + VTY++L+   C+ GK  +A  V     ++G+ P+  +Y  L    CK G + 
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M + G   +   YN+++   CK G  DQA+     +   G  P+V +Y T+ 
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  SG+  RA  ++ EML  GI+P  +TYN L++  C  G V+    LL  M      
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P   +YN ++  +C    +  + E+   M  +  +PNE TY +LI+G        EA   
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 497 ANALV 501
            N ++
Sbjct: 667 HNEMI 671



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 215/434 (49%), Gaps = 21/434 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAY 109
           G+ + ++  ++ MVA G +P+  + T ++     + + + A+ V+E +  +    D   Y
Sbjct: 308 GELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVY 367

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++SGFC    +  A +  D ++ +G + D VTY  +I  LC  G ++ A KV  ++L 
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
                  +TYT+L+                   G CK+G + +AFQ   ++  RG  P+V
Sbjct: 428 RRLDVDEVTYTVLVD------------------GYCKRGKMAEAFQVHNTMVQRGVAPNV 469

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++Y  L   L   G  +   +L+ EM ++GLE N  TY+ LI+ LC+ G  + A+  +  
Sbjct: 470 VTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMAD 529

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               GL PD Y+Y  LI A CK G LD A + L  M+ +G  P IV YN ++  FC +G 
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE-MLSKGIEPDEITYN 408
            +   ++ E + +    PN ++YN++    +  G+ +++   I + M S+ +EP+E TYN
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQ-YCIGNNMKSTTEIYKGMCSRNVEPNENTYN 648

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C+   + EA     +M    FR T  SY+ +I    K ++  E+ ++   M ++
Sbjct: 649 ILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKE 708

Query: 469 GCKPNETTYVLLIE 482
           G       Y   I+
Sbjct: 709 GFTAEPDVYNFYID 722



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 191/395 (48%), Gaps = 17/395 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV  Y  LI G+C   ++E A K+LD + +RG  P+   Y  ++  LC +G +  A  V
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            + ++          YT ++     +G    A +  DEM                 G+C+
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G + +A + ++ + +R    D ++Y +L+      GK  E  ++   M+ RG+ PNVVT
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ L   LC+ G  + A ++L     KGL  +A +Y+ LI+  CK G LD A+  +  M 
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G  PD+  Y T++ A CK+G  D+A ++ +++ D G  P + +YN + +    SG   
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVE 591

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
               ++  ML K I P+  TYNSL+   C    +     +   M S    P   +YNI+I
Sbjct: 592 GGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILI 651

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            G CK R + E+      M EKG +   ++Y  LI
Sbjct: 652 KGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 19/362 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    RAG+  E+   ++ M+A     D V  T L+  + +  K  +A +V   + 
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y AL  G CK   ++ AN++L  + ++G   +  TYN +I  LC  G ++
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +    +     KP V TYT LI A    G+ D+A  LL EM                
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM---------------- 565

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G +P +++YN+L+      G+ E G+KL+  M+ + + PN  TY+ L+   C   
Sbjct: 566 --LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGN 623

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +   ++ +    + + P+  +Y+ LI  +CK   +  A  F + MI  G      +Y+
Sbjct: 624 NMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYS 683

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    K     +A ++F  +   G       YN      ++  +    L +  E++  
Sbjct: 684 ALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEA 743

Query: 399 GI 400
            I
Sbjct: 744 SI 745



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 21/308 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV E  +  L+    + GK  E+     +MV  G  P+VV  T L     ++     A 
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++  +   G E +   YN+LI+G CKA  ++ A + +  + + G  PDV TY  +I +L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G ++ A  +  ++L +  KPT++TY +L+    + G+ +   KLL+ M         
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM--------- 600

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   LE +   P+  +YN L++        +   ++   M SR +EPN  TY+ILI
Sbjct: 601 --------LE-KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILI 651

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-- 329
              C+    ++A        EKG    A SY  LI    K  +   A +    M  +G  
Sbjct: 652 KGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFT 711

Query: 330 CLPDIVNY 337
             PD+ N+
Sbjct: 712 AEPDVYNF 719


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +++ ++  E +  +YN L+   C A +I+ A+++ D + S    PDVVTY IM+   C+
Sbjct: 241 AVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
              +E+A K+  ++     +   + YT +I     EGQ   A++++++M           
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C+KG +  A  +   ++ RG   D ++Y  L+  L   G+ +E E+++ EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +GL+ + VTY++LI   C+ GK  +A  V     +K +TP+  +Y  L    CK G + 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M S G   +I  YN+++   CK GN +QA+     + + G  P+V +Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  S +  RA  ++ EML KGI+P  +TYN L++  C  G V+    LL  M      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P   +YN ++  +C  + +  + E+   M  +   PNE TY +LI+G
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 19/415 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYN 110
           + + ++  +  M A G + + V  T +I     E + + AVRV+E +  +G   D   + 
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            ++SGFC+   +  A    D ++ RG + D VTY  +I  LC  G ++ A +V  ++   
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                 +TYT+LI                   G CK G + +AF     +  +   P+V+
Sbjct: 420 GLDVDAVTYTVLID------------------GYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  L   L   G      +L+ EM S+GLE N+ TY+ LI+ LC+ G  E A+  +   
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E GL PD Y+Y  +I A C+   LD A   L  M+  G  P IV YN ++  FC +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +    + E + +    PN ++YN++        +      +   MLS+ + P+E TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           I   C+   + EA+    +M    FR T  SYN +I    K ++  E+  +   M
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 191/397 (48%), Gaps = 19/397 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  +++  +E MV +G   D  + T ++  F ++     A    + ++K G   D   Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+G C+A +++ A +VL  +  +G   D VTY ++I   C  G +  AF V +++++
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V+TYT L                    G+CK+G V  A + +  + S+G + ++
Sbjct: 454 KRVTPNVVTYTALSD------------------GLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN L+  L   G  E+  + M +M   GL+P+V TY+ +I +LC+  + + A  +L+ 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             +KG+ P   +Y+ L++ +C  GR++     L++M+     P+   YN+++  +C   N
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
                EI++ +      PN ++YN +      + +   AL   SEM+ KG      +YN+
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           LI  L +     EA  L   M   R       YN  I
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 21/349 (6%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           +  +YNI++ +LC+ G I+ A ++FD++      P V+TY I++       + + A+KLL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            EM                   +RG + + ++Y  ++  L + G+  +  +++ +M+  G
Sbjct: 309 SEMA------------------ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +  +   ++ ++S  CR G    A +     +++GL  D  +Y  LI+  C+ G L  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M   G   D V Y  ++  +CK G   +A  +  K+      PNV +Y  +   L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   A  ++ EM SKG+E +  TYNSLI+ LC+ G +++A+  ++DM+    +P V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +Y  II   C+++ ++ +  +L  M +KG KP   TY +L+ G    G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 19/322 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    RAG+  E+   ++ M   G   D V  T LI  + +  K  +A  V  +++
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+V  Y AL  G CK   +  AN++L  + S+G   ++ TYN +I  LC  G +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +    +     KP V TYT +I A     + D+A  LL EM                
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM---------------- 556

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G +P +++YN+L+      G+ E G++L+  M+ + + PN  TY+ L+   C + 
Sbjct: 557 --LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +   ++ +    + + P+  +Y+ LI  +CK   +  A+ F   MI  G      +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 339 TILAAFCKNGNADQALEIFEKL 360
            ++    K     +A  +FEK+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKM 696



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 7/283 (2%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A Q  + L  +    +  SYN+LL+ L   G+ ++  +L  EM S    P+VVTY I++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMV 292

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C   + E A+ +L     +GL  +  +Y  +I+  C +G++  A+  ++ M+  G +
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D   + T+++ FC+ G+   A   F+++   G   +  +Y  + + L  +G+   A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  KG++ D +TY  LI   C+ G + EA  +   M   R  P V++Y  +  G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
              +  + E+L  M  KG + N  TY  LI G+   G   +AM
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 11/283 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L   G  P   S N +L  L      +E  +L  E+     E N  +Y+IL+ +LC  G+
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA  +     E    PD  +Y  ++  YC    L+ AI+ L  M + G   + V Y +
Sbjct: 269 IKDAHQLF---DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++A  C  G    A+ + E +   G   + + + T+ S     GD   A     EM  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +  D +TY +LI+ LCR G + EA  +L +ME        ++Y ++I G+CK  ++ E+ 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            V   M +K   PN  TY  L +G+   G    A EL + + S
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 21/308 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV    +  LI    + GK  E+      MV     P+VV  T L     ++     A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++ E+  K  E ++F YN+LI+G CKA  +E A + +  +   G  PDV TY  +IG+L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    ++ A  +  ++L    KPT++TY +L+    + G+ +   +LL+ M         
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--------- 591

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   LE +   P+  +YN L++        +   ++   M+S+ + PN  TY+ILI
Sbjct: 592 --------LE-KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD--G 329
              C+    ++A+       EKG    A SY+ LI    K  +   A    + M  +   
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 330 CLPDIVNY 337
             PD+ N+
Sbjct: 703 AEPDVYNF 710


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 35/495 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPN +          F   I+   RAGK DE+      M   GC PD+V  T LI     
Sbjct: 259 RPNVY---------TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 309

Query: 85  ERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             +   A  +   ++  G  PD   Y  L+  F     ++   +   ++ + G+ PDVVT
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           + I++  LC     + AF  FD + +    P + TY  LI   +  G+ + A+KLL  M 
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM- 428

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
                            ES G QP   +YN+ +      G+  +  +   +M ++G+ PN
Sbjct: 429 -----------------ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +V  +  + SL   G+  +A  +    +E GL PD+ +Y+ ++  Y K G++D A+  L 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            MI +GC PD++  N+++ +  K G  D+A ++F+++ D+   P V +YNT+ S L   G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A+ +   M+ K   P+ I++N+L+ C C++  V+ A+ +   M     +P V++YN
Sbjct: 592 RVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +I G  K  ++N +      + +K   P+  T   L+ G+   G   +A+ +A     M
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF--M 708

Query: 504 HAISRDTFKRLNRTF 518
           + +      R+NR+F
Sbjct: 709 YQVRF----RVNRSF 719



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 224/452 (49%), Gaps = 19/452 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  LI    ++G   E+L     MV+ G KP +   + L+    ++R S   
Sbjct: 187 GFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV 246

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + +++ +E  G  P+V+ +   I    +A +I+ A ++  R+   G  PD+VTY ++I +
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC+ G +E+A ++F ++  +  KP  + Y  L+      G  D                 
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK-------------- 352

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               +F   +E+ G  PDV+++ +L+  L     ++E       M  +G+ PN+ TY+ L
Sbjct: 353 ----EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  L R G+ EDA+ +L   +  G+ P AY+Y+  I  + K G    A+E  + M + G 
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+IV  N  L +  + G   +A  +F  L + G  P+  +YN M       G    A+ 
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++SEM+  G EPD I  NSLI  L + G VDEA  +   M+  +  PTV++YN ++ G  
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K  R+ ++IE+  +M EK C PN  ++  L++
Sbjct: 589 KEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 242/524 (46%), Gaps = 57/524 (10%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
            LI   ++AG+ DE+    + M      P VV    L+    +E +  KA+ + E ++EK 
Sbjct: 548  LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 102  GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              P+  ++N L+  FCK +++ELA K+  ++      PDV+TYN +I  L     +  AF
Sbjct: 608  CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 162  KVFDQLLRDNCKPTVIT------------------------------------YTILIQA 185
              F QL + +  P  +T                                    +  L+  
Sbjct: 668  WFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726

Query: 186  TMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQ-FVRSLESRGCQP 227
            T++E + DKA+   +E+ +                 CK      A+Q F +  +  G  P
Sbjct: 727  TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             + SYN L+  LL +   E+   L  +M + G  P+  T+++L++   + GK  +  ++ 
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            +    +   PDA +Y+ +IS+  K   LD A++F   ++S    P    Y  ++    K 
Sbjct: 847  KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            G  ++A+ +FE++SD GC PN + +N + +     GD   A  +   M+++GI PD  +Y
Sbjct: 907  GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966

Query: 408  NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
              L+ CLC  G VDEA+    +++ST   P  I+YN II G  K++R+ E++ +   M  
Sbjct: 967  TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026

Query: 468  KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            +G  P+  TY  L+  +G  G   +A  +   L  +  +  D F
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL-QLAGLEPDVF 1069



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 242/568 (42%), Gaps = 97/568 (17%)

Query: 32  SFDVKETQ--------FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +FDV   Q        +  LI    RAG+ +++L  + +M + G +P        I  F 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG 448

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +  ++ KAV   E ++  G  P++ A NA +    +  ++  A  + + LR  G +PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN+M+      G ++ A  +  +++R+ C+P VI    LI +    G+ D+A ++ D M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ K+G V +A +   S+  + C P+ IS+N LL       + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 246 EEGEKLMTEM----------------------------------ISRGLEPNVVTYSILI 271
           E   K+ ++M                                  + + + P+ VT   L+
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 272 SSLCRDGKTEDAVDVLRA---------------------------------AKE---KGL 295
             L + G+  DA+ + R                                  A+E    G+
Sbjct: 689 PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQAL 354
             +     PL+   CK  R   A +  D      G  P + +YN ++    +    ++A 
Sbjct: 749 CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++F+ + +VGC P+  ++N + +    SG       +  EM+S+  +PD ITYN +IS L
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            +   +D+A+    D+ S+ FRPT  +Y  +I G  K  R+ E++ +   M + GCKPN 
Sbjct: 869 AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             + +LI G G  G    A +L   +V+
Sbjct: 929 AIFNILINGYGKIGDTETACQLFKRMVN 956



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 175/370 (47%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+   CK  +   A ++ D+   + G SP + +YN +IG L      E A+ +F  +   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P   T+ +L+    + G               K G + + F+  + + SR C+PD I
Sbjct: 818  GCAPDAFTFNMLLA---VHG---------------KSGKITELFELYKEMISRRCKPDAI 859

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            +YN+++ +L      ++      +++S    P   TY  LI  L + G+ E+A+ +    
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             + G  P+   ++ LI+ Y K G  + A +    M+++G  PD+ +Y  ++   C  G  
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D+AL  F +L   G  P+  +YN + + L  S     AL + +EM ++GI PD  TYNSL
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            +  L   GMV++A  +  +++     P V +YN +I G+  +     +  V   M   GC
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 471  KPNETTYVLL 480
             PN  TY  L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 222/485 (45%), Gaps = 43/485 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ DE++  +  M+ NGC+PDV++   LI   ++  + ++A ++ + ++     P V 
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+SG  K  +++ A ++ + +  +  SP+ +++N ++   C    +E A K+F ++
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
              +CKP V+TY  +I   + E + + A     ++                G+ K G +G
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIG 698

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE--GEKLMT-----------EMISR 258
            A    R    +            +R  +N   WE+  G  L+            E++  
Sbjct: 699 DAISIARDFMYQ------------VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           G+         L+  LC+  +   A  +  +  K+ G++P   SY+ LI    +    + 
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A +    M + GC PD   +N +LA   K+G   +  E+++++    C P+  +YN + S
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +L  S +  +AL    +++S    P   TY  LI  L + G ++EA+ L  +M     +P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
               +NI+I G+ K      + ++   M  +G +P+  +Y +L++ +   G   EA+   
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 498 NALVS 502
           N L S
Sbjct: 987 NELKS 991



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 23/351 (6%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N M+  L     +E    VF+ + +   +  + TY  + +A  + G   +   +L++M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 203 G-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             + + G  G+A +  R + S G +P + +Y+ L+  L   GK 
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKK 240

Query: 246 EEGEKLMT---EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
            + E +M    EM   GL PNV T++I I  L R GK ++A ++ R   ++G  PD  +Y
Sbjct: 241 RDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             LI A C  G+L+ A E    M ++G  PD V Y T+L  F   G+ D   E + ++  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  P+V ++  +   L  + D   A      M  +GI P+  TYN+LI  L R G +++
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           A+ LL  MES   +PT  +YNI I  F K+    +++E    M  KG  PN
Sbjct: 421 ALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 19/299 (6%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
            F  L+    ++GK  E     + M++  CKPD +    +I    +    +KA+    +++
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                 P    Y  LI G  K  ++E A ++ + +   G  P+   +NI+I      G  E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            +A ++F +++ +  +P + +YTIL+    L G+ D+A+   +E                 
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE----------------- 988

Query: 219  SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             L+S G  PD I+YN ++  L    + EE   L  EM +RG+ P++ TY+ L+ +L   G
Sbjct: 989  -LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047

Query: 279  KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E A  +    +  GL PD ++Y+ LI  Y      + A      M+ DGC P+I  Y
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 3/294 (1%)

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +   F+F   ++ +  + D+ +Y  + + L   G   +   ++ +M   G   N  +Y+ 
Sbjct: 141 MAAVFEF---MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  L + G   +A++V R    +GL P   +Y  L+ A  K    ++ +  L  M   G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P++  +   +    + G  D+A EIF ++ D GC P++ +Y  +  AL ++G    A 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  +M + G +PD++ Y +L+      G +D        ME+  + P V+++ I++   
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           CK R  +E+      M ++G  PN  TY  LI G+   G   +A++L   + S+
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 95/204 (46%)

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ED   V    ++K +  D  +Y  +  A    G L      L+ M   G + +  +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    ++G   +ALE++ ++   G  P++ +Y+ +  AL    D    + ++ EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  T+   I  L R G +DEA  +   M+     P +++Y ++I   C   ++  +
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
            E+   M   G KP++  Y+ L++
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLD 340



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  LI    + G  + +    + MV  G +PD+   T L+       + ++A+     L+
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
              G +PD  AYN +I+G  K+ ++E A  + + +R+RG  PD+ TYN ++ +L   GM+E
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
             A +++++L     +P V TY  LI+   L    +                   A+   +
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE------------------HAYTVYK 1092

Query: 219  SLESRGCQPDVISYNML 235
            ++   GC P++ +Y  L
Sbjct: 1093 NMMVDGCNPNIGTYAQL 1109



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 45/253 (17%)

Query: 319 IEFLDYMISDGCLPDIVNY----NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           I  L Y  S    P +++     N +L     +   +    +FE +       ++ +Y T
Sbjct: 103 IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLT 162

Query: 375 MFSALWSSG---------DKIRALGMI--------------------------SEMLSKG 399
           +F AL   G         +K+R  G +                            M+S+G
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++P   TY++L+  L +    +  + LL +ME    RP V ++ I I    +  +I+E+ 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALVSMHAISRDTFKRL 514
           E+   M ++GC P+  TY +LI+ +   G    A EL     AN       I      + 
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 515 NRTFPLLDVYKEI 527
           N  F  LD +KE 
Sbjct: 343 N-DFGDLDTFKEF 354


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 221/445 (49%), Gaps = 18/445 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+ + +  M   G  PDV+  + ++  + +  + +K  +++E++++ G +P+ + Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ++I   C+  ++  A +    +  +G  PD V Y  +I   C RG I +A K F ++  
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            +  P V+TYT +I      G   +A KL  EM                 G CK G +  
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF+    +   GC P+V++Y  L+  L   G  +   +L+ EM   GL+PN+ TY+ +++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G  E+AV ++   +  GL  D  +Y  L+ AYCK G +D A E L  M+  G  P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            IV +N ++  FC +G  +   ++   +   G  PN +++N++        +   A  + 
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M S+G+ PD  TY +L+   C+   + EA  L  +M+   F  +V +Y+++I GF K 
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679

Query: 453 RRINESIEVLAAMFEKGCKPNETTY 477
           ++  E+ EV   M  +G   ++  +
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF 704



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 204/398 (51%), Gaps = 20/398 (5%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++++  + +ME+  K   PDV +Y+ +++G+C+  +++   K+++ ++ +G  P+   Y 
Sbjct: 263 KEAHHLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +IG LC    +  A + F +++R    P  + YT LI                   G C
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID------------------GFC 362

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G +  A +F   + SR   PDV++Y  ++     +G   E  KL  EM  +GLEP+ V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ LI+  C+ G  +DA  V     + G +P+  +Y  LI   CK+G LD A E L  M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P+I  YN+I+   CK+GN ++A+++  +    G   +  +Y T+  A   SG+ 
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A  ++ EML KG++P  +T+N L++  C  GM+++   LL  M +    P   ++N +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +  +C    +  +  +   M  +G  P+  TY  L++G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 196/378 (51%), Gaps = 18/378 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V +YN +I   C+  +I+ A+ +L  +  +G++PDV++Y+ ++   C  G ++  +K+ 
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           + + R   KP    Y  +I                    +C+   + +A +    +  +G
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGL------------------LCRICKLAEAEEAFSEMIRQG 346

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PD + Y  L+      G      K   EM SR + P+V+TY+ +IS  C+ G   +A 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +      KGL PD+ ++  LI+ YCK G +  A    ++MI  GC P++V Y T++   
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G+ D A E+  ++  +G  PN+ +YN++ + L  SG+   A+ ++ E  + G+  D 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY +L+   C+ G +D+A  +L +M     +PT++++N+++ GFC    + +  ++L  
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 465 MFEKGCKPNETTYVLLIE 482
           M  KG  PN TT+  L++
Sbjct: 587 MLAKGIAPNATTFNSLVK 604



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 18/378 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R  K  E+      M+  G  PD V+ T LI  F +      A +   E+  +   PDV 
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y A+ISGFC+   +  A K+   +  +G  PD VT+  +I   C  G ++ AF+V + +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           ++  C P V+TYT LI     EG  D A +LL EM                 G+CK G +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + V   E+ G   D ++Y  L+      G+ ++ ++++ EM+ +GL+P +VT+++L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C  G  ED   +L     KG+ P+A +++ L+  YC    L  A      M S G 
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   Y  ++   CK  N  +A  +F+++   G   +VS+Y+ +          + A  
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 391 MISEMLSKGIEPDEITYN 408
           +  +M  +G+  D+  ++
Sbjct: 688 VFDQMRREGLAADKEIFD 705



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           V + +  G  P V  +++  + L++ G   E  ++  +M++ GL  +V + ++ ++ L +
Sbjct: 165 VYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222

Query: 277 DG-KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           D  KT  A+ V R   E G+  +  SY+ +I   C+ GR+  A   L  M   G  PD++
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y+T++  +C+ G  D+  ++ E +   G  PN   Y ++   L        A    SEM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + +GI PD + Y +LI   C+ G +  A     +M S    P V++Y  II GFC+   +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E+ ++   MF KG +P+  T+  LI G    G   +A  + N ++ 
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 18/307 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +LI    +AG   ++      M+  GC P+VV  T LI    +E   + A  ++  + 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P++F YN++++G CK+  IE A K++    + G + D VTY  ++ + C  G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  ++L    +PT++T+ +L+    L G  +   KLL+ M                
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C +  +  A    + + SRG  PD  +Y  L++        +E   L  EM  +G  
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +V TYS+LI    +  K  +A +V    + +GL  D   +D       K  R D  ++ 
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 723

Query: 322 LDYMISD 328
           +D +I +
Sbjct: 724 IDEIIEN 730


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 233/511 (45%), Gaps = 56/511 (10%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L   + M+ NG  PDV  C ++++    E   +KA  V  ++E++G +P V  YN ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           +CK  +++ A ++L  ++ RG  P+ VTYN+++  L  +G +E A  + +++L      +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM--------------------------------- 202
             TY  LI     +G   +A  L++EM                                 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 203 -------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G C+ G + +AF     L+ R   P VI+YN L+  L   G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             +   +L  EM  +GL P++ TY+IL++   + G    A         KGL PD ++Y+
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             I    K     +A    + M++ G  PD++ YN  + A C+ GN ++A ++ E +   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  +Y ++ +    +G   +A  + +EMLSKG+ P  +TY  LI       M+D A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI-E 482
                 M        VI+YN II G C TRR++E+ +    M EKG  PN+ +Y +LI E
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFKR 513
               G W  EA+ L   ++    I  D+F  
Sbjct: 645 SCNMGYWE-EALRLYREMLD-RKIQPDSFTH 673



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 22/456 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           + G+ +++   IE M+ +G          LI  F Q+    +A  ++E ++ +   P + 
Sbjct: 262 KKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321

Query: 108 AYNALISGFCKANQIE-LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN L+ G CK  Q+  +  +  D L+S+ F+PD+V++N ++   C  G I  AF +FD+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSK-FTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           L   +  PTVITY  LI    + G  D A++L  EM                    +G  
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM------------------TDQGLF 422

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD+ +Y +L+     +G          EM+S+GL+P+   Y+  I    +   T  A  +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  PD  +Y+  + A C+ G  + A + L+ M+SDG +PD V Y +I+  F K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG+  +A E+F ++   G  P+V +Y  +  A  +      A    S+ML K +  + IT
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN++I+ LC    +DEA     +ME     P   SY I+I   C      E++ +   M 
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  +P+  T+ + ++ + +  ++  A++   +L+ 
Sbjct: 663 DRKIQPDSFTHSVFLKNL-HRDYQVHAVQCVESLIQ 697



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 184/405 (45%), Gaps = 18/405 (4%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK-SNKAV 92
           +V    +  LI    + G F E+   +E MV     P +     L+    +  + +   +
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341

Query: 93  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           R  ++L+    PD+ ++N+L+ G+C+   I  A  + D L+ R   P V+TYN +I  LC
Sbjct: 342 RFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
             G +++A ++  ++      P + TYTIL+      G    A    +EM          
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G  K      AF     + + G  PDVI+YN+ +  L   G +EE   L+  M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           +S GL P+ VTY+ +I+   ++G    A +V      KG+ P   +Y  LI A+     L
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           DLA  +   M+      +++ YN I+   C     D+A + F+++ + G  PN  SY  +
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            +   + G    AL +  EML + I+PD  T++  +  L RD  V
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV 686



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L +F+K+   G  P+V + N +   L       +A  +   M   GI+P  +TYN+++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            C++G VD+A+ LL +M+     P  ++YN+++ G  K   + ++  ++  M   G   +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
             TY  LI G    G   EA +L   +V+             R FP L  Y  + +
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVN------------RRAFPTLSTYNTLMY 328



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 67/118 (56%)

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            +  L +  +M+  G+ PD    N ++  L  + ++ +A  +   ME    +PTV++YN 
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++  +CK  R+++++E+L+ M E+GC PN+ TY +L+ G+   G   +A  L   +++
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 222/460 (48%), Gaps = 20/460 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           RAG+ D++   +++M   GC PDVV  T LI       K +KA  +  ++     +PD+ 
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L+S F     +E   +    + + G++PDVVTY I++ +LC  G ++ AF + D +
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P + TY  LI   +   + D+A++L + M                  ES G  P
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM------------------ESLGVAP 435

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              SY + +     +G  E+      +M  RG+ P++   +  + SL   G+  +A D+ 
Sbjct: 436 TAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIF 495

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL+PD+ +Y+ ++  Y K G++D A + L  M+S+GC PDI+  N+++    K 
Sbjct: 496 NDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKA 555

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A ++F +L D+   P V +YN + + L   G  ++AL +   M   G  P+ +T+
Sbjct: 556 GRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTF 615

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+ CLC++  VD A+ +   M      P V++YN II G  K  R   +      M +
Sbjct: 616 NALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-K 674

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           K   P+  T   L+ G+   G   +A+++    V    + 
Sbjct: 675 KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 227/452 (50%), Gaps = 19/452 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  LI    + G   E+L   + M++ G KP +   + L+    + R +   
Sbjct: 187 GFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTI 246

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + ++E +E  G  P+++ Y   I    +A +I+ A  +L  +   G  PDVVTY ++I +
Sbjct: 247 MDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC+ G ++ A +++ ++   + KP ++TY  L+      G  +   +   EM        
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM-------- 358

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                     E+ G  PDV++Y +L+  L   GK ++   ++  M  RG+ PN+ TY+ L
Sbjct: 359 ----------EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           IS L    + ++A+++    +  G+ P AYSY   I  Y K G  + A++  + M   G 
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P I   N  L +  + G   +A +IF  + + G  P+  +YN M      +G   +A  
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++EMLS+G EPD I  NSLI  L + G VDEA  +   ++  +  PTV++YNI+I G  
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLG 588

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K  ++ +++++  +M E GC PN  T+  L++
Sbjct: 589 KEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 250/585 (42%), Gaps = 101/585 (17%)

Query: 14   ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
            E  R+  + +   + H          +  ++K   +AG+ D++   +  M++ GC+PD++
Sbjct: 484  EMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDII 543

Query: 74   MCTKLIKKFFQERKSNKAVRVMEILEKYGE-------PDVFAYNALISGFCKANQIELAN 126
            +   LI   +      KA RV E  + +G        P V  YN LI+G  K  ++  A 
Sbjct: 544  VVNSLIDTLY------KAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 127  KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
             +   ++  G  P+ VT+N ++  LC    ++ A K+F ++   NC P V+TY  +I   
Sbjct: 598  DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 187  MLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRS-LESRGCQP-- 227
            + EG+   A     +M                G+ K G V  A + V   +   G Q   
Sbjct: 658  IKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSN 717

Query: 228  -----------------DVISY-------------NM---LLRTLLNMGKWEEGEKLMTE 254
                             + IS+             N+   L+R L    K  + +KL  +
Sbjct: 718  QVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777

Query: 255  MI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
               S G  P   +Y+ L+  L     TE A+ +    K  G  P+ ++Y+ L+ A+ K  
Sbjct: 778  FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK 837

Query: 314  RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN-------------------------- 347
            R+D   E  + M+  GC P+I+ +N I++A  K+                          
Sbjct: 838  RIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYG 897

Query: 348  ---------GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
                     G +++A++IFE++ D  C PN + YN + +    +G+   A  +   M+ +
Sbjct: 898  PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE 957

Query: 399  GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            GI PD  +Y  L+ CL   G VD+AV    +++ T   P  +SYN++I G  K+RR+ E+
Sbjct: 958  GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017

Query: 459  IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            + + + M  +G  P   TY  LI   G  G   +A ++   L  M
Sbjct: 1018 LSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFM 1062



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI   CK  +   A K+ D+  +S G  P   +YN ++  L    + E+A K+F ++   
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P + TY +L+ A     + D+  +L +EM +C                 RGC+P++I
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEM-LC-----------------RGCKPNII 859

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            ++N+++  L+      +   L  E+IS    P   TY  LI  L + G++E+A+ +    
Sbjct: 860  THNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM 919

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +    P+   Y+ LI+ + K G +++A +    MI +G  PD+ +Y  ++      G  
Sbjct: 920  PDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D A+  FE+L   G  P+  SYN M + L  S     AL + SEM ++GI P+  TYN+L
Sbjct: 980  DDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            I      GMVD+A  +  +++     P V +YN +I G  K+   + +  V   M   GC
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099

Query: 471  KPNETTYVLL 480
             PN  T+  L
Sbjct: 1100 SPNAGTFAQL 1109



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 207/478 (43%), Gaps = 71/478 (14%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFC 117
           Y +E +  +G   D+     L++K    R  N  + + + L   G               
Sbjct: 127 YMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKG--------------- 171

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               I  A   L ++R  GF  +  +YN +I  L   G  + A KV+ +++ +  KP++ 
Sbjct: 172 ---GIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMK 228

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY+ L+ A      T   M LL+EM                  E+ G +P++ +Y + +R
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEM------------------ETLGLRPNIYTYTICIR 270

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV---LRAAKEK- 293
            L   G+ ++   ++  M   G  P+VVTY++LI +LC  GK + A ++   +RA+  K 
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330

Query: 294 -------------------------------GLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
                                          G  PD  +Y  L+ A CK G++D A + L
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M   G +P++  YNT+++        D+ALE+F  +  +G  P   SY          
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD  +AL    +M  +GI P     N+ +  L   G + EA  +  D+ +    P  ++Y
Sbjct: 451 GDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           N+++  + K  +I+++ ++L  M  +GC+P+      LI+ +   G   EA ++   L
Sbjct: 511 NMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 173/361 (47%), Gaps = 22/361 (6%)

Query: 139 PDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           P++V    T N M+  L   G +E    VFD + +        TY  + +A  ++G   +
Sbjct: 116 PNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQ 175

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           A   L +M   + G V  A+                SYN L+  LL  G  +E  K+   
Sbjct: 176 APFALGKMR--QAGFVLNAY----------------SYNGLIYFLLQPGFCKEALKVYKR 217

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MIS GL+P++ TYS L+ +L R   T   +D+L   +  GL P+ Y+Y   I    + GR
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A   L  M  +GC PD+V Y  ++ A C  G  D+A E++ K+      P++ +Y T
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + S   + GD        SEM + G  PD +TY  L+  LC+ G VD+A  +L  M    
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P + +YN +I G    RR++E++E+   M   G  P   +YVL I+  G  G   +A+
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 495 E 495
           +
Sbjct: 458 D 458



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 37/325 (11%)

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           F+ V  L +    P+  +Y  +L  L   G+ E+   +   M  + +  N  TY  +  +
Sbjct: 109 FKMVSQLPNIVHTPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKA 166

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L   G    A   L   ++ G   +AYSY+ LI    + G    A++    MIS+G  P 
Sbjct: 167 LSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPS 226

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y+ ++ A  +  +    +++ E++  +G  PN+ +Y      L  +G    A G++ 
Sbjct: 227 MKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILK 286

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV------------------------- 428
            M  +G  PD +TY  LI  LC  G +D+A  L                           
Sbjct: 287 TMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYG 346

Query: 429 ----------DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
                     +ME+  + P V++Y I++   CK+ +++++ ++L  M  +G  PN  TY 
Sbjct: 347 DLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYN 406

Query: 479 LLIEGIGYGGWRAEAMELANALVSM 503
            LI G+       EA+EL N + S+
Sbjct: 407 TLISGLLNLRRLDEALELFNNMESL 431



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 1/161 (0%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            LI    +AG  + +    + M+  G +PD+   T L++  F   + + AV   E L+  G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             +PD  +YN +I+G  K+ ++E A  +   +++RG SP++ TYN +I    + GM++ A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            K+F++L     +P V TY  LI+     G  D+A  +  +M
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 1/141 (0%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            L++  F  G+ D+++++ E +   G  PD V    +I    + R+  +A+ +   ++  G
Sbjct: 969  LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              P+++ YNALI  F  A  ++ A K+ + L+  G  P+V TYN +I      G  + AF
Sbjct: 1029 ISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088

Query: 162  KVFDQLLRDNCKPTVITYTIL 182
             VF +++   C P   T+  L
Sbjct: 1089 SVFKKMMIVGCSPNAGTFAQL 1109


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 229/452 (50%), Gaps = 19/452 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           QF K++    +A  +   +     M  NG   ++V  + LI  F Q   ++ +  V   I
Sbjct: 71  QFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNI 130

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K  EPD      LI G C    I  A    D++ + GF  + V+Y  +I  LC  G  
Sbjct: 131 LKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQT 190

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A ++  ++     +  V+ Y  +I                   G+CK  +V  AF F 
Sbjct: 191 KAALEMLRRIDGKLVRLDVVMYNTIID------------------GVCKDKLVNDAFDFY 232

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + ++   P V++YN L+  L  MG+ ++   L+ +MI   + P V T+SIL+ + C++
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++A +V     +K + P+  +Y+ L++ YC    ++ A    + M   G  PD+ +Y
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + +++ FCK    D+A+++FE++      P+V +YN++   L  SG    AL +I EM  
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G  P+ ITYNSL+  LC++  VD+A+ LL  ++    +P+V +YNI+I G CK+ R+ +
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           + +V   +   G   +  TY  +I+G    G+
Sbjct: 473 AQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGF 504



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 216/438 (49%), Gaps = 18/438 (4%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P +  +  ++    KAN   +   +  ++   G + ++VT +I+I      G   
Sbjct: 62  QKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNS 121

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            +F VF  +L+   +P  IT T LI+   L+G   KA+   D++                
Sbjct: 122 LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLI 181

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G    A + +R ++ +  + DV+ YN ++  +       +     +EM+++ + 
Sbjct: 182 NGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC 241

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P VVTY+ LI  LC  G+ +DA+ +L     + + P  Y++  L+ A+CK+G++  A   
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+     P+IV YN+++  +C     ++A  IF  ++ +G  P+V SY+ M S    
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCK 361

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 A+ +  EM  K I PD +TYNSLI  LC+ G +  A+ L+ +M      P +I+
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANAL 500
           YN ++   CK   ++++IE+L  + +   +P+  TY +LI G+   G   +A ++  + L
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVL 481

Query: 501 VSMHAISRDTFKRLNRTF 518
           V+ + I   T+  + + F
Sbjct: 482 VNGYNIDVYTYNTMIKGF 499



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 129/268 (48%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F   L  +   P +I +  +L +L+    +     L  +M   G+  N+VT SILI+   
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G    +  V     +KG  PDA +   LI   C  G +  A+ F D +++ G   + V
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y T++   CK G    ALE+  ++       +V  YNT+   +        A    SEM
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           ++K I P  +TYN+LI  LC  G + +A+GLL  M      PTV +++I++  FCK  ++
Sbjct: 236 VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKV 295

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  V   M +K  KPN  TY  L+ G
Sbjct: 296 KEAKNVFVVMMKKDVKPNIVTYNSLMNG 323



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 1/114 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+   +L  I  M   G  P+++    L+    +    +KA+ ++  L+ +  +P V 
Sbjct: 396 KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVC 455

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            YN LI+G CK+ +++ A KV + +   G++ DV TYN MI   C +G +   F
Sbjct: 456 TYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 233/514 (45%), Gaps = 58/514 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   F+ G+  ++      M   G KPDVV    +I    + R  +KA  V+  +   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD   YN +I G+    +++ A K+  +++SRG  P++V  N  + SLC  G  + A 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++FD +     KP +++Y  L+     EG     + L + M                   
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN- 263
            K+GMV  A      ++ +G  PDV++Y+ ++     MG+  +  +   +M++RG++PN 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 264 -----------------------------------VVTYSILISSLCRDGKTEDAVDVLR 288
                                              +V ++ +I+SLC+DG+  DA D+  
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              + G  PD  ++  LI  YC  G++D A + LD M   G   DIV Y+T+L  + KNG
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             +  L +F ++   G  PN  +Y  M + L+ +G  + A     EM+  G       Y 
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            ++  LCR+   DEA+ L   + +   + ++   N +I    K +R  E+ E+ A +   
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  PNE+TY ++I  +   G    A+E AN + S
Sbjct: 751 GLLPNESTYGVMIINLLKDG----AVEDANNMFS 780



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 219/429 (51%), Gaps = 22/429 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISG 115
            +  M   GC P+V   + ++K       S +A+ + +++ K G    P+V AYN +I G
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F K  +   A  +   +  +G  PDVVTYN++I +LC    ++ A  V  Q+  +  +P 
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            +TY  +I      G+  +A K+                   R ++SRG  P+++  N  
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMF------------------RKMKSRGLIPNIVICNSF 376

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L +L   G+ +E  ++   M ++G +P++V+Y  L+     +G   D + +  + K  G+
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             D   ++ LI AY K G +D A+     M   G  PD+V Y+T+++AF + G    A+E
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCL 414
            F ++   G  PN + Y+++       G  ++A  ++SEM++KGI  PD + +NS+I+ L
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+DG V +A  +   +     RP VI++  +I G+C   +++++ ++L AM   G + + 
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616

Query: 475 TTYVLLIEG 483
            TY  L++G
Sbjct: 617 VTYSTLLDG 625



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 222/459 (48%), Gaps = 19/459 (4%)

Query: 65  ANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIE 123
              C P+VV    +I  FF+E ++ KA  +   + + G +PDV  YN +I   CKA  ++
Sbjct: 258 GGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  VL ++ + G  PD VTYN MI    + G ++ A K+F ++      P ++     +
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
            +    G++ +A ++ D M                 G   +G          S++S G  
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
            D   +N+L+      G  ++   + TEM  +G+ P+VVTYS +IS+  R G+  DA++ 
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-LPDIVNYNTILAAFC 345
                 +G+ P+   Y  +I  +C  G L  A E +  MI+ G   PDIV +N+++ + C
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K+G    A +IF+ ++D+G  P+V ++ ++       G   +A  ++  M   G+E D +
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TY++L+    ++G +++ + L  +M+    +P  ++Y I++ G  +  R   + +    M
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            E G     + Y +++ G+       EA+ L   L +M+
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 195/400 (48%), Gaps = 21/400 (5%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y+ L+   C+A + +L   +   +   G     +T + ++  LC     E A  V  
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
             + +  C P V +Y+I+++                  G+C   M  +A    + +   G
Sbjct: 217 HRMSELGCVPNVFSYSIILK------------------GLCDNSMSQRALDLFQMMAKEG 258

Query: 225 --CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C P+V++YN ++      G+  +   L  EM  +G++P+VVTY+++I +LC+    + 
Sbjct: 259 GACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDK 318

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VLR     G  PD  +Y+ +I  Y   GRL  A +    M S G +P+IV  N+ LA
Sbjct: 319 AELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLA 378

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           + CK+G + +A EIF+ ++  G  P++ SY T+     S G     +G+ + M S GI  
Sbjct: 379 SLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAA 438

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N LI    + GMVD+A+ +  +M+     P V++Y+ +I  F +  R+ +++E  
Sbjct: 439 DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKF 498

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             M  +G +PN   Y  +I+G    G   +A EL + +++
Sbjct: 499 NQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN 538



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 19/417 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +SM A G KPD+V    L+  +  E      + +   ++  G   D  
Sbjct: 382 KHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  + K   ++ A  +   ++ +G SPDVVTY+ +I +    G +  A + F+Q+
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    +P    Y  +IQ   + G   KA +L+ EM                   +CK G 
Sbjct: 502 VARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGR 561

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V  A      +   G +PDVI++  L+     +GK ++  K++  M   G+E ++VTYS 
Sbjct: 562 VMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYST 621

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+    ++G+  D + + R  + KG+ P+  +Y  +++   + GR   A +    MI  G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               +  Y  IL   C+N  AD+A+ +F+KL  +    +++  NTM +A++    K  A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            + + + + G+ P+E TY  +I  L +DG V++A  +   ME +   P     N II
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 198/441 (44%), Gaps = 34/441 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  D+++     M   G  PDVV  + +I  F      ++  R+ + +E
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF------SRMGRLTDAME 496

Query: 100 KYGE-------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSL 151
           K+ +       P+   Y+++I GFC    +  A +++  + ++G   PD+V +N +I SL
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G +  A  +FD +     +P VIT+T LI    L G+ DKA K+LD M         
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM--------- 607

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                    E  G + D+++Y+ LL      G+  +G  L  EM  +G++PN VTY I++
Sbjct: 608 ---------EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + L R G+T  A        E G T     Y  ++   C++   D AI     + +    
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVK 718

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
             I   NT++ A  K    ++A E+F  +S  G  PN S+Y  M   L   G    A  M
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNM 778

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            S M   GI P     N +I  L   G + +A   L  ++  R      + ++++  F +
Sbjct: 779 FSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSR 838

Query: 452 TRRINESIEVLAAM--FEKGC 470
             + +E +++L A   F  GC
Sbjct: 839 KGKYHEDMKLLPAKYNFFDGC 859



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 9/150 (6%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           P  V +Y+ +      +      L +   +L  G++  +IT ++L+ CLC     +EAV 
Sbjct: 154 PLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVN 213

Query: 426 LLVD-MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG--CKPNETTYVLLIE 482
           +L+  M      P V SY+II+ G C       ++++   M ++G  C PN   Y  +I 
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFK 512
           G    G   +A  L       H ++R   K
Sbjct: 274 GFFKEGETGKACSL------FHEMTRQGVK 297


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 226/449 (50%), Gaps = 28/449 (6%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +PNT +L+          L+K     G+  +SL+F + +VA G + D V    L+    +
Sbjct: 77  QPNTIILN---------TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 85  ERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             ++  A++++  +E +   PDV  Y+ +I G CK   ++ A  +   + +RG  PDV+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y  +I   C  G +  AF + ++++  N  P + TY  LI                    
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT------------------ 229

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK+G V ++   +  +  +G +PDV+ Y++L+     +G+ ++ +++   M+  G+ P+
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V +Y+I+I+ LC+  + ++A+++LR    K + PD  +Y  LI   CK GR+   ++   
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G   ++V YN++L   CKN N D+A+ +F K+ + G  PN  +Y  +   L   G
Sbjct: 350 EMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGG 409

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +   +   +L KG   D  TY  +IS LC++GM DEA+ +   ME     P  +++ 
Sbjct: 410 RLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFE 469

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKP 472
           III    +    +++ ++L  M  KG  P
Sbjct: 470 IIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 229/464 (49%), Gaps = 18/464 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    +   +   +   + M A G  PD+V  + LI  F    +   +  V+  +
Sbjct: 12  EFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKI 71

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G +P+    N L+ G C   +++ +    D++ ++GF  D V+Y I++  LC  G  
Sbjct: 72  LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGET 131

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A K+   +   + +P V+ Y+ +I     +   D+A  L  EM               
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G C  G + +AF  +  +  +   P++ +YN L+ TL   GK +E + L+  M  +G+
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P+VV YSIL+   C  G+ + A  +     + G+ PD YSY+ +I+  CK  R+D A+ 
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMN 311

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M+    +PD V Y++++   CK G     L++ +++   G P N+ +YN++   L 
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC 371

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            + +  +A+ +  +M  +GI+P++ TY +LI  LC+ G + +   L   +    +   V 
Sbjct: 372 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +Y ++I G CK    +E++ + + M + GC PN  T+ ++I  +
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +  ++    K         +  ++ ++G  PD+VT +I+I   C  G +  +F V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++L+   +P  I    L++   L+G+  K++   D++                 G+CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A + +R++E R  +PDV+ Y+ ++  L      +E   L +EM +RG+ P+V+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C  G+  +A  +L     K + P+ Y+Y+ LI   CK+G++  +   L  M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  PD+V Y+ ++  +C  G   +A +IF  +   G  P+V SYN + + L       
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ EML K + PD +TY+SLI  LC+ G +   + L  +M        +++YN ++
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            G CK + ++++I +   M E+G +PN+ TY  LI+G+  GG   +   L   L+
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 166/320 (51%), Gaps = 8/320 (2%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           + +E++G  PD+++ ++L+    ++G+      ++ +++  G +PN +  + L+  LC  
Sbjct: 34  KQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLK 93

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ + ++        +G   D  SY  L++  CK G    AI+ L  +      PD+V Y
Sbjct: 94  GEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMY 153

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           +TI+   CK+   D+A +++ +++  G  P+V +Y T+      +G  + A G+++EM+ 
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           K I P+  TYN+LI  LC++G V E+  LL  M     +P V+ Y+I++ G+C    + +
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR--------D 509
           + ++   M + G  P+  +Y ++I G+  G    EAM L   ++  + I          D
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333

Query: 510 TFKRLNRTFPLLDVYKEISH 529
              +L R   +LD+ KE+ H
Sbjct: 334 GLCKLGRITTILDLTKEMHH 353



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/166 (20%), Positives = 80/166 (48%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P I+ +  IL +  K  +    + + +++   G  P++ + + + +     G    +  
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ ++L  G +P+ I  N+L+  LC  G V +++     + +  F+   +SY I++ G C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K      +I++L  + ++  +P+   Y  +I+G+       EA +L
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDL 172


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +++ ++  E +  +YN L+   C A +I+ A+++ D + S    PDVVTY IM+   C+
Sbjct: 241 AVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
              +E+A K+  ++     +   + YT +I     EGQ   A++++++M           
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C+KG +  A  +   ++ RG   D ++Y  L+  L   G+ +E E+++ EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +GL+ + VTY++LI   C+ GK  +A  V     +K +TP+  +Y  L    CK G + 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M S G   +I  YN+++   CK GN +QA+     + + G  P+V +Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  S +  RA  ++ EML KGI+P  +TYN L++  C  G V+    LL  M      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P   +YN ++  +C  + +  + E+   M  +   PNE TY +LI+G
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 19/415 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYN 110
           + + ++  +  M A G + + V  T +I     E + + AVRV+E +  +G   D   + 
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            ++SGFC+   +  A    D ++ RG + D VTY  +I  LC  G ++ A +V  ++   
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                 +TYT+LI                   G CK G + +AF     +  +   P+V+
Sbjct: 420 GLDVDAVTYTVLID------------------GYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  L   L   G      +L+ EM S+GLE N+ TY+ LI+ LC+ G  E A+  +   
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E GL PD Y+Y  +I A C+   LD A   L  M+  G  P IV YN ++  FC +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +    + E + +    PN ++YN++        +      +   MLS+ + P+E TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           I   C+   + EA+    +M    FR T  SYN +I    K ++  E+  +   M
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 191/397 (48%), Gaps = 19/397 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  +++  +E MV +G   D  + T ++  F ++     A    + ++K G   D   Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+G C+A +++ A +VL  +  +G   D VTY ++I   C  G +  AF V +++++
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V+TYT L                    G+CK+G V  A + +  + S+G + ++
Sbjct: 454 KRVTPNVVTYTALSD------------------GLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN L+  L   G  E+  + M +M   GL+P+V TY+ +I +LC+  + + A  +L+ 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             +KG+ P   +Y+ L++ +C  GR++     L++M+     P+   YN+++  +C   N
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
                EI++ +      PN ++YN +      + +   AL   SEM+ KG      +YN+
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           LI  L +     EA  L   M   R       YN  I
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 21/349 (6%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           +  +YNI++ +LC+ G I+ A ++FD++      P V+TY I++       + + A+KLL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            EM                   +RG + + ++Y  ++  L + G+  +  +++ +M+  G
Sbjct: 309 SEMA------------------ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +  +   ++ ++S  CR G    A +     +++GL  D  +Y  LI+  C+ G L  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M   G   D V Y  ++  +CK G   +A  +  K+      PNV +Y  +   L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   A  ++ EM SKG+E +  TYNSLI+ LC+ G +++A+  ++DM+    +P V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +Y  II   C+++ ++ +  +L  M +KG KP   TY +L+ G    G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 19/322 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    RAG+  E+   ++ M   G   D V  T LI  + +  K  +A  V  +++
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+V  Y AL  G CK   +  AN++L  + S+G   ++ TYN +I  LC  G +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +    +     KP V TYT +I A     + D+A  LL EM                
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM---------------- 556

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G +P +++YN+L+      G+ E G++L+  M+ + + PN  TY+ L+   C + 
Sbjct: 557 --LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +   ++ +    + + P+  +Y+ LI  +CK   +  A+ F   MI  G      +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 339 TILAAFCKNGNADQALEIFEKL 360
            ++    K     +A  +FEK+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKM 696



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 7/283 (2%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A Q  + L  +    +  SYN+LL+ L   G+ ++  +L  EM S    P+VVTY I++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMV 292

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C   + E A+ +L     +GL  +  +Y  +I+  C +G++  A+  ++ M+  G +
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D   + T+++ FC+ G+   A   F+++   G   +  +Y  + + L  +G+   A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  KG++ D +TY  LI   C+ G + EA  +   M   R  P V++Y  +  G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
              +  + E+L  M  KG + N  TY  LI G+   G   +AM
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 11/283 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L   G  P   S N +L  L      +E  +L  E+     E N  +Y+IL+ +LC  G+
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA  +     E    PD  +Y  ++  YC    L+ AI+ L  M + G   + V Y +
Sbjct: 269 IKDAHQLF---DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++A  C  G    A+ + E +   G   + + + T+ S     GD   A     EM  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +  D +TY +LI+ LCR G + EA  +L +ME        ++Y ++I G+CK  ++ E+ 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            V   M +K   PN  TY  L +G+   G    A EL + + S
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 137/308 (44%), Gaps = 21/308 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV    +  LI    + GK  E+      MV     P+VV  T L     ++     A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++ E+  K  E ++F YN+LI+G CKA  +E A + +  +   G  PDV TY  +IG+L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    ++ A  +  ++L    KPT++TY +L+    + G+ +   +LL+ M         
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--------- 591

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   LE +   P+  +YN L++        +   ++   M+S+ + PN  TY+ILI
Sbjct: 592 --------LE-KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD--G 329
              C+    ++A+       EKG    A SY+ LI    K  +   A    + M  D   
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702

Query: 330 CLPDIVNY 337
             PD+ N+
Sbjct: 703 AEPDVYNF 710


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 243/483 (50%), Gaps = 31/483 (6%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
            H L++    +Q  KL+K    AG  ++++Y  + M  + C+   V   + I    +  +
Sbjct: 8   AHRLAY---RSQISKLVK----AGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 88  SNKAVRVM--EILEKYGEPDVFAYNALISGFCKA-NQIELA--NKVLDRLRSRGFSPDVV 142
            + A       ++ +      F Y+  IS  C A N I L   + +L  + S GF PD+ 
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK----L 198
            +N  +  LC +  +E+A ++F  +      P V++YTI+I A     + D+A K    L
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180

Query: 199 LDE-------------MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
           +D+             +G+C  G V  A++ V  +   G + + + YN L+     MG+ 
Sbjct: 181 IDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRV 240

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++  K+   M   G  P++VTY+IL++  C +G  ++AV ++   +  G+ PD YSY+ L
Sbjct: 241 DKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNEL 300

Query: 306 ISAYCKDGRLDLA-IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +  +CK   +D A +  ++ M + G + D+V+YNT++ AFCK     +  E+FE++   G
Sbjct: 301 LKGFCKANMVDRAHLMMVERMQTKG-MCDVVSYNTVITAFCKARRTRKGYELFEEMCGKG 359

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P++ ++N +  A    G       ++ EM    + PD I Y +++  LC++G VD A 
Sbjct: 360 IRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAH 419

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +  DM      P VISYN ++ GFCKT R+ +++ +   M  KG  P+E TY L++ G+
Sbjct: 420 SVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGL 479

Query: 485 GYG 487
             G
Sbjct: 480 IRG 482



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 180/387 (46%), Gaps = 23/387 (5%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           + Y   I  L   G+I  A  +FDQ+   NC+   + Y   I   +   +   A      
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70

Query: 202 MGMCKKGMVGQAFQFVR----------------------SLESRGCQPDVISYNMLLRTL 239
             +  +G     F + R                       ++S G  PD+ ++N  L  L
Sbjct: 71  -HVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLL 129

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
               + E   +L   M S+G +P+VV+Y+I+I +LC   + ++A  V R   +KGL+PD 
Sbjct: 130 CRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDY 189

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +   L+   C  GR+DLA E +  +I  G   + + YN ++  FC+ G  D+A++I   
Sbjct: 190 KACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAF 249

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +S  GC P++ +YN + +     G    A+ ++  M   G+EPD  +YN L+   C+  M
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD A  ++V+   T+    V+SYN +I  FCK RR  +  E+   M  KG +P+  T+ +
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369

Query: 480 LIEGIGYGGWRAEAMELANALVSMHAI 506
           LI+     G      +L + +  M  +
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVL 396



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 166/351 (47%), Gaps = 18/351 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           A +FDE+      ++  G  PD   C  L+       + + A  ++  + K G + +   
Sbjct: 167 AKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLV 226

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNALI GFC+  +++ A K+   +   G  PD+VTYNI++   C  GM++ A ++ + + 
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVG 211
           R   +P + +Y  L++        D+A  ++ E                    CK     
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR 346

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           + ++    +  +G +PD++++N+L+   L  G     +KL+ EM    + P+ + Y+ ++
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVV 406

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC++GK + A  V R   E G+ PD  SY+ L++ +CK  R+  A+   D M S G  
Sbjct: 407 DHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLY 466

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           PD V Y  I+    +      A  +++++ + G   N     T+ +A+ SS
Sbjct: 467 PDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQSS 517



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 151/293 (51%), Gaps = 20/293 (6%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V    +  LI    R G+ D+++     M   GC PD+V    L+    +E   ++AVR+
Sbjct: 222 VNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRL 281

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLC 152
           +E +E+ G EPD+++YN L+ GFCKAN ++ A+ ++ +R++++G   DVV+YN +I + C
Sbjct: 282 VETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFC 340

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
                   +++F+++     +P ++T+ ILI A + EG T    KLLDEM          
Sbjct: 341 KARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCI 400

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +CK G V  A    R +   G  PDVISYN LL       +  +   L  EM
Sbjct: 401 FYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEM 460

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            S+GL P+ VTY +++  L R  K   A  V     E+G T + +  + L++A
Sbjct: 461 QSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 224/465 (48%), Gaps = 18/465 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           A +++ ++  + SM A G  PDV+  +  I    +  +  +AV ++  ++  G +P+V  
Sbjct: 199 ARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIV 258

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+A IS   K  Q E A  +L  + + G +PDV+TY+ +I +   RG  E AF++  ++ 
Sbjct: 259 YSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMP 318

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                  +ITY+I+I A    GQ ++A+ LL EM                    KKG   
Sbjct: 319 TKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWE 378

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +R +   G  P+ ISY +++      G+W E   L+ EM + G+ P+V+ YS  I
Sbjct: 379 EAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAI 438

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +  +  + E A+ +LR     GLTP+  SY+  I A  K GR  +A+E L  M + G  
Sbjct: 439 DACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLA 498

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD++ Y+ ++A+       ++AL++F ++   G  P+V S NT  +A    G    AL +
Sbjct: 499 PDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDV 558

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM + G+ PD I+Y + I    +     E + LL +M +    P  ISY   +     
Sbjct: 559 LGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSV 618

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                E++ +L  M   G  P+  TY   I     GG   EA  L
Sbjct: 619 DGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVL 663



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 252/518 (48%), Gaps = 33/518 (6%)

Query: 2   STVVSCINPKSNER---VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           S + +C N +  ER   +  S +A   P   L         +   I    +  ++ E++ 
Sbjct: 191 SAIAACGNARQWERAVELLASMAARGTPPDVLT--------YSSAIAACAKVSRWKEAVG 242

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            + SM   G KP+V++ +  I    +  +   AV +++ +   G  PDV  Y+ +I    
Sbjct: 243 LLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACA 302

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  Q E A ++L  + ++G   +++TY+I+IG+    G  E A  +  ++  +   P VI
Sbjct: 303 KRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVI 362

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSL 220
           TY+  I A   +GQ ++A+ LL EM M                  K+G   +A   ++ +
Sbjct: 363 TYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM 422

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           ++ G  PDVI+Y+  +       +WE+   L+ EM + GL PNV++Y+  I +  + G++
Sbjct: 423 QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRS 482

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR-LDLAIEFLDYMISDGCLPDIVNYNT 339
           + AV++LR     GL PD  +Y  +I A C  GR  + A++    M   G  PD+V+ NT
Sbjct: 483 KIAVELLREMPAHGLAPDVITYSAVI-ASCAMGRQWEEALDLFREMQRQGITPDVVSCNT 541

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA-LGMISEMLSK 398
            + A  + G  ++AL++  ++  +G  P+  SY T   A  + GD+ +  + ++ EM + 
Sbjct: 542 AINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDAC-AKGDRWKEIIDLLREMSTV 600

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ PD I+Y   +S    DG+  EA+ LL DM +    P V++YN  I    K  R  E+
Sbjct: 601 GLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEA 660

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +L  M   G  P+  ++   I+  G G     A+E+
Sbjct: 661 TVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEV 698



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 228/448 (50%), Gaps = 27/448 (6%)

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           KA+ V++ +++ G +PD   Y++ I+    A Q E A ++L  + +RG  PDV+TY+  I
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            +       + A  +   +     KP VI Y+  I A    GQ + A+ LL EM      
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM------ 282

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                        + G  PDVI+Y+ ++      G+WE   +L+ EM ++G+  N++TYS
Sbjct: 283 ------------PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYS 330

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           I+I +  + G+ E+AV +LR  +E G+ PD  +Y   ISA  K G+ + A+  L  M  +
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPME 390

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+ ++Y  +++A  K G   +A+++ +++   G PP+V +Y+    A   +    +A
Sbjct: 391 GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQA 450

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++ EM + G+ P+ I+YNS I    + G    AV LL +M +    P VI+Y+ +I  
Sbjct: 451 LWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS 510

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM----H 504
               R+  E++++   M  +G  P+  +    I     GGW  EA+++   + +M     
Sbjct: 511 CAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPD 570

Query: 505 AISR----DTFKRLNRTFPLLDVYKEIS 528
           AIS     D   + +R   ++D+ +E+S
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMS 598



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 188/399 (47%), Gaps = 20/399 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I    + G+++E++  +  M  NG  PDV+  +  I    ++ +  +AV ++  +   G
Sbjct: 332 VIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG 391

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+  +Y  +IS   K  +   A  +L  +++ G  PDV+ Y+  I +       E A 
Sbjct: 392 VTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQAL 451

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
            +  ++      P VI+Y   I A    G++  A++LL EM                  C
Sbjct: 452 WLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASC 511

Query: 206 KKG-MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
             G    +A    R ++ +G  PDV+S N  +      G WEE   ++ EM + GL P+ 
Sbjct: 512 AMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDA 571

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           ++Y   I +  +  + ++ +D+LR     GLTPDA SY   +SA   DG    A+  L  
Sbjct: 572 ISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRD 631

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M++ G  PD+V YN+ + A  K G   +A  +  ++   G  P+V+S+N    A   +GD
Sbjct: 632 MLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDAC-GNGD 690

Query: 385 KI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +   A+ ++ EM + G+ P+E TY + +    R G  D+
Sbjct: 691 QWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKDD 729



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 193/421 (45%), Gaps = 18/421 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + G+++ +   +  M   G   +++  + +I    +  +  +AV ++  ++
Sbjct: 294 YSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQ 353

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PDV  Y++ IS   K  Q E A  +L  +   G +P+ ++Y I+I +   RG   
Sbjct: 354 ENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWR 413

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  ++      P VI Y+  I A     + ++A+ LL EM                
Sbjct: 414 EAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAI 473

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K G    A + +R + + G  PDVI+Y+ ++ +     +WEE   L  EM  +G+ 
Sbjct: 474 DACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGIT 533

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VV+ +  I++  + G  E+A+DVL      GL PDA SY   I A  K  R    I+ 
Sbjct: 534 PDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDL 593

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M + G  PD ++Y   ++A   +G   +AL +   +  VG  P+V +YN+  +A   
Sbjct: 594 LREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAK 653

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  ++ +M + G+ PD  ++N+ I           AV +L +M +    P   +
Sbjct: 654 GGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEAT 713

Query: 442 Y 442
           Y
Sbjct: 714 Y 714



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 18/331 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I    + G++ E++  ++ M A+G  PDV+  +  I    Q  +  +A+ ++  +   G
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V +YN+ I    K  + ++A ++L  + + G +PDV+TY+ +I S       E A 
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEAL 521

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
            +F ++ R    P V++    I A    G  ++A+ +L EM                  C
Sbjct: 522 DLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDAC 581

Query: 206 KKG-MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            KG    +    +R + + G  PD ISY   +      G W+E   L+ +M++ GL P+V
Sbjct: 582 AKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDV 641

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+  I++  + G+ ++A  +LR     GL PD  S++  I A     +   A+E L  
Sbjct: 642 VTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFE 701

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           M + G  P+   Y T + A  + G  D  ++
Sbjct: 702 MRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 220/446 (49%), Gaps = 28/446 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+   F+  K  +A  ++  +E  G  PDV +Y  +I G+C   +++   +++  ++ +G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P++ TY+ +I  LC  G +    KV  ++++    P  + YT LI             
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLID------------ 223

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G CK G    A++    +E+R   PD I+++ L+  L   GK  E +KL  EMI
Sbjct: 224 ------GFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +G EP+ VTY+ LI   C+ G+ + A  +     + GLTP+  +Y  L    CK G LD
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M   G   +I  YNTI+   CK GN  QA+++ E++ + G  P+  +Y T+ 
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            A + +G+ ++A  ++ EML +G++P  +T+N L++ LC  G +++   LL  M      
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P   +YN I+  +C    +  S E+   M  +G  P+  TY +LI+G        EA  L
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 497 ANALV---------SMHAISRDTFKR 513
              +V         S +A+ +  FKR
Sbjct: 518 HKEMVEKRFNLTASSYNALIKGFFKR 543



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 224/458 (48%), Gaps = 18/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   FR GK  E+ + +  M   GC PDVV  T +I  +    +  K V++++ ++  G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+++ Y+++I   CK+ ++    KVL  +  RG  PD V Y  +I   C  G  ++A+
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+F ++      P  I ++ LI      G+  +A KL +EM                 G 
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G + +AF     +   G  P+V++Y  L   L   G+ +   +L+ EM  +GL+ N+
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ +++ LC+ G    AV ++   KE GL PD  +Y  L+ AY K G +  A E L  
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  P +V +N ++   C +G  +    + + + + G  PN ++YN++        +
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              +  +   M ++G+ PD  TYN LI   C+   + EA  L  +M   RF  T  SYN 
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +I GF K +++ E+ ++   M  +G   +   Y L ++
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 195/401 (48%), Gaps = 25/401 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           ++GK  E    +  M+  G  PD V+ T LI  F +   +  A ++   +E +   PD  
Sbjct: 192 KSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSI 251

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A++ALI G   + ++  A+K+ + +  +GF PD VTY  +I   C  G ++ AF + +Q+
Sbjct: 252 AFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQM 311

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           ++    P V+TYT L       G+ D A +LL EM                 G+CK G +
Sbjct: 312 VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI 371

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA + +  ++  G  PD I+Y  L+      G+  +  +L+ EM+ RGL+P VVT+++L
Sbjct: 372 LQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVL 431

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC  GK ED   +L+   EKG+ P+A +Y+ ++  YC    + ++ E    M + G 
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV 491

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD   YN ++   CK  N  +A  + +++ +       SSYN +    +     + A  
Sbjct: 492 VPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQ 551

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDG-------MVDEAV 424
           +  EM  +G+      YN  +     +G       + DEA+
Sbjct: 552 LFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAI 592



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 199/409 (48%), Gaps = 34/409 (8%)

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFC---------KANQIELANKVLDRLRSRGFSP 139
           N+A +  + L  YG        AL +G C         K + + +  KV       G   
Sbjct: 56  NEARKFFDKLLNYGV-------ALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCW 108

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           +  +YNI++ SL   G I  A  +  ++    C P V++YT +I                
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID--------------- 153

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G C  G + +  Q V+ ++ +G +P++ +Y+ ++  L   GK  EGEK++ EM+ RG
Sbjct: 154 ---GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + P+ V Y+ LI   C+ G T+ A  +    + + + PD+ ++  LI      G++  A 
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  + MI  G  PD V Y  ++  +CK G   +A  +  ++  +G  PNV +Y  +   L
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             SG+   A  ++ EM  KG++ +  TYN++++ LC+ G + +AV L+ +M+     P  
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           I+Y  ++  + KT  + ++ E+L  M ++G +P   T+ +L+ G+   G
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 17/362 (4%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           + +  D   +++    L   G++  A K FD+LL          Y + + A    G  + 
Sbjct: 33  KDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLL---------NYGVALSA----GSCNL 79

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
            +  L      K+ M+G   +        G   +  SYN+L+ +L  +GK  E   L+  
Sbjct: 80  YLTCLSS----KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMR 135

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  +G  P+VV+Y+ +I   C  G+ +  V +++  + KGL P+ Y+Y  +I   CK G+
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +    + L  M+  G  PD V Y T++  FCK GN   A ++F ++      P+  +++ 
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  SG  + A  + +EM+ KG EPDE+TY +LI   C+ G + +A  L   M    
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V++Y  +  G CK+  ++ + E+L  M  KG + N +TY  ++ G+   G   +A+
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375

Query: 495 EL 496
           +L
Sbjct: 376 KL 377



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 148/292 (50%), Gaps = 7/292 (2%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + + + +  G  P V  +++  + L+  G   E  K   ++++ G+  +  + ++ ++  
Sbjct: 27  RLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT-- 82

Query: 275 CRDGKTEDAVDVLRAAKE---KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           C   K +    VL+   E    G+  +  SY+ L+++  + G++  A   L  M   GC+
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+V+Y TI+  +C  G   + +++ +++   G  PN+ +Y+++   L  SG  +    +
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM+ +G+ PD + Y +LI   C+ G    A  L  +ME+    P  I+++ +I G   
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ++ E+ ++   M +KG +P+E TY  LI+G    G   +A  L N +V +
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI 314



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 23/322 (7%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F+  E  +  LI    + G+  ++ +    MV  G  P+VV  T L     +  + + A
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             ++ E+  K  + ++  YN +++G CKA  I  A K+++ ++  G  PD +TY  ++ +
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
               G +  A ++  ++L    +PTV+T+ +L+    + G+ +   +LL    M +KG++
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK--WMLEKGIM 457

Query: 211 GQAFQF-------------------VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
             A  +                    R + ++G  PD  +YN+L++        +E   L
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM+ +       +Y+ LI    +  K  +A  +    + +GL   A  Y+  +    +
Sbjct: 518 HKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYE 577

Query: 312 DGRLDLAIEFLDYMISDGCLPD 333
           +G ++  +E  D  I + CL D
Sbjct: 578 EGNMETTLELCDEAI-EKCLLD 598



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 19/252 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +AG   +++  +E M   G  PD +  T L+  +++  +  KA  ++ E+L++  +P V 
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L++G C + ++E   ++L  +  +G  P+  TYN ++   C R  +  + +++  +
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P   TY ILI+                  G CK   + +A+   + +  +    
Sbjct: 487 CAQGVVPDSNTYNILIK------------------GHCKARNMKEAWFLHKEMVEKRFNL 528

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              SYN L++      K  E  +L  EM   GL  +   Y++ +     +G  E  +++ 
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELC 588

Query: 288 RAAKEKGLTPDA 299
             A EK L   A
Sbjct: 589 DEAIEKCLLDKA 600


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +++ ++  E +  +YN L+   C A +I+ A+++ D + S    PDVVTY IM+   C+
Sbjct: 241 AVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCT 297

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
              +E+A K+  ++     +   + YT +I     EGQ   A++++++M           
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C+KG +  A  +   ++ RG   D ++Y  L+  L   G+ +E E+++ EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +GL+ + VTY++LI   C+ GK  +A  V     +K +TP+  +Y  L    CK G + 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M S G   +I  YN+++   CK GN +QA+     + + G  P+V +Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  S +  RA  ++ EML KGI+P  +TYN L++  C  G V+    LL  M      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P   +YN ++  +C  + +  + E+   M  +   PNE TY +LI+G
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 19/415 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYN 110
           + + ++  +  M A G + + V  T +I     E + + AVRV+E +  +G   D   + 
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            ++SGFC+   +  A    D ++ RG + D VTY  +I  LC  G ++ A +V  ++   
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
                 +TYT+LI                   G CK G + +AF     +  +   P+V+
Sbjct: 420 GLDVDAVTYTVLID------------------GYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  L   L   G      +L+ EM S+GLE N+ TY+ LI+ LC+ G  E A+  +   
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            E GL PD Y+Y  +I A C+   LD A   L  M+  G  P IV YN ++  FC +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +    + E + +    PN ++YN++        +      +   MLS+ + P+E TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           I   C+   + EA+    +M    FR T  SYN +I    K ++  E+  +   M
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 191/397 (48%), Gaps = 19/397 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  +++  +E MV +G   D  + T ++  F ++     A    + ++K G   D   Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+G C+A +++ A +VL  +  +G   D VTY ++I   C  G +  AF V +++++
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V+TYT L                    G+CK+G V  A + +  + S+G + ++
Sbjct: 454 KRVTPNVVTYTALSD------------------GLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN L+  L   G  E+  + M +M   GL+P+V TY+ +I +LC+  + + A  +L+ 
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             +KG+ P   +Y+ L++ +C  GR++     L++M+     P+   YN+++  +C   N
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
                EI++ +      PN ++YN +      + +   AL   SEM+ KG      +YN+
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           LI  L +     EA  L   M   R       YN  I
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 21/349 (6%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           +  +YNI++ +LC+ G I+ A ++FD++      P V+TY I++       + + A+KLL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            EM                   +RG + + ++Y  ++  L + G+  +  +++ +M+  G
Sbjct: 309 SEMA------------------ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +  +   ++ ++S  CR G    A +     +++GL  D  +Y  LI+  C+ G L  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M   G   D V Y  ++  +CK G   +A  +  K+      PNV +Y  +   L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   A  ++ EM SKG+E +  TYNSLI+ LC+ G +++A+  ++DM+    +P V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +Y  II   C+++ ++ +  +L  M +KG KP   TY +L+ G    G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 19/322 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    RAG+  E+   ++ M   G   D V  T LI  + +  K  +A  V  +++
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+V  Y AL  G CK   +  AN++L  + S+G   ++ TYN +I  LC  G +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +    +     KP V TYT +I A     + D+A  LL EM                
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM---------------- 556

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G +P +++YN+L+      G+ E G++L+  M+ + + PN  TY+ L+   C + 
Sbjct: 557 --LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +   ++ +    + + P+  +Y+ LI  +CK   +  A+ F   MI  G      +YN
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 339 TILAAFCKNGNADQALEIFEKL 360
            ++    K     +A  +FEK+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKM 696



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 7/283 (2%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A Q  + L  +    +  SYN+LL+ L   G+ ++  +L  EM S    P+VVTY I++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMV 292

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C   + E A+ +L     +GL  +  +Y  +I+  C +G++  A+  ++ M+  G +
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D   + T+++ FC+ G+   A   F+++   G   +  +Y  + + L  +G+   A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  KG++ D +TY  LI   C+ G + EA  +   M   R  P V++Y  +  G CK
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
              +  + E+L  M  KG + N  TY  LI G+   G   +AM
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 11/283 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L   G  P   S N +L  L      +E  +L  E+     E N  +Y+IL+ +LC  G+
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALCTAGR 268

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +DA  +     E    PD  +Y  ++  YC    L+ AI+ L  M + G   + V Y +
Sbjct: 269 IKDAHQLF---DEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++A  C  G    A+ + E +   G   + + + T+ S     GD   A     EM  +G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +  D +TY +LI+ LCR G + EA  +L +ME        ++Y ++I G+CK  ++ E+ 
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            V   M +K   PN  TY  L +G+   G    A EL + + S
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 21/308 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV    +  LI    + GK  E+      MV     P+VV  T L     ++     A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++ E+  K  E ++F YN+LI+G CKA  +E A + +  +   G  PDV TY  +IG+L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    ++ A  +  ++L    KPT++TY +L+    + G+ +   +LL+ M         
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--------- 591

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                   LE +   P+  +YN L++        +   ++   M+S+ + PN  TY+ILI
Sbjct: 592 --------LE-KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD--G 329
              C+    ++A+       EKG    A SY+ LI    K  +   A    + M  +   
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 330 CLPDIVNY 337
             PD+ N+
Sbjct: 703 AEPDVYNF 710


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 206/407 (50%), Gaps = 20/407 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +E+ ++    +V +YN L+   C A +++ A ++ D + S   +PDVVTY I+I   C+
Sbjct: 247 AIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCA 303

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G +E+A K+ D+++    +P    YT ++     +G    A++++++M           
Sbjct: 304 LGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEAL 363

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C KG +  A ++   ++ +G   D ++Y  ++  L    + EE EKL+ EM 
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           +R L+ + VTY++LI   C+ GK  +A  +  A  ++G+TP+  +Y  L    CK G + 
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A E L  M + G   +   YN+++   CK G  +QA+     +      P+V +Y T+ 
Sbjct: 484 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLI 543

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  SGD  RA  ++ EML KGI+P  +TYN L++  C  G V+    LL  M      
Sbjct: 544 DALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIH 603

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P   +YN ++  +C    +  + E+   M  +   PNE TY +LI+G
Sbjct: 604 PNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKG 650



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 208/441 (47%), Gaps = 19/441 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           LI      G+ + ++  ++ MVA G +P+  + T ++     +   + A+RV+E ++++ 
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D   Y  ++SGFC    +  A +  D ++ +G + D VTY  MI  LC    +E A 
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           K+  ++         +TYT+LI                   G CK+G + +AFQ   ++ 
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLID------------------GYCKRGKMAEAFQMHNAMV 458

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG  P+V++Y  L   L   G  +   +L+ EM ++GLE N  TY+ LI+ LC+ G  E
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+  +       L PD Y+Y  LI A CK G LD A   L  M+  G  P IV YN ++
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC +G  +   ++ + + +    PN ++YN++        +      +   M S+ + 
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+E TYN LI   C+   + EA+    +M    FR T  SY+ +I    K ++  E+ E+
Sbjct: 639 PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAREL 698

Query: 462 LAAMFEKGCKPNETTYVLLIE 482
              M ++G       Y   I+
Sbjct: 699 FHDMRKEGLTAESDVYDFYID 719



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 19/326 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    RA + +E+   ++ M A     D V  T LI  + +  K  +A ++   + 
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y AL  G CK   ++ AN++L  + ++G   +  TYN +I  LC  G +E
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +    +     KP V TYT LI A    G  D+A  LL EM                
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM---------------- 562

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G +P +++YN+L+      G+ E G+KL+  M+ + + PN  TY+ L+   C + 
Sbjct: 563 --LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIEN 620

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +   ++ +  + + + P+  +Y+ LI  +CK   +  A+ F D MI  G      +Y+
Sbjct: 621 NMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYS 680

Query: 339 TILAAFCKNGNADQALEIFEKLSDVG 364
            ++    K     +A E+F  +   G
Sbjct: 681 ALIRLLNKKKKFVEARELFHDMRKEG 706



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 11/285 (3%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +R L   G  P   + N +L  L      +E  +L  E+  +    NV +Y+IL+ +LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+ +DA  +     E    PD  +Y  LI  +C  G L+ A++ LD M++ G  P+  
Sbjct: 271 DAGRVKDARQLF---DEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y +++A  C  G    AL + E +       + + Y T+ S   + GD + A     EM
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             KG+  D +TY ++I+ LCR   ++EA  LL +M + R     ++Y ++I G+CK  ++
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+ ++  AM ++G  PN  TY  L +G+   G    A EL + +
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 18/312 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            DV E  +  LI    + GK  E+     +MV  G  P+VV  T L     ++     A 
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++  +   G E +   YN+LI+G CKA  +E A + +  + +    PDV TY  +I +L
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  +  ++L    KPT++TY +L+    + G+ +   KLLD M         
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNA 606

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                     C +  +    +  + + SR   P+  +YN+L++        +E      E
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI +G      +YS LI  L +  K  +A ++    +++GLT ++  YD  I     +  
Sbjct: 667 MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDN 726

Query: 315 LDLAIEFLDYMI 326
           L+  +   D ++
Sbjct: 727 LESTLALCDELV 738



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 11/251 (4%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+  +   G+ P+    + ++S L  D    +A+++ +    K +     SY+ L+ A C
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRLPLD----EAIELFQELPHKNVC----SYNILLKALC 270

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
             GR+  A +  D M S    PD+V Y  ++   C  G  + A+++ +++   G  PN +
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            Y ++ + L   G    AL ++ +M+ + +  DE  Y +++S  C  G +  A     +M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           +        ++Y  +I G C+   + E+ ++L  M+ +    +E TY +LI+G    G  
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 491 AEAMELANALV 501
           AEA ++ NA+V
Sbjct: 448 AEAFQMHNAMV 458



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  +L   G  P+  + N + S L        A+ +  E+  K +     +YN L+  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRLPLD----EAIELFQELPHKNV----CSYNILLKALC 270

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G V +A  L  +M S    P V++Y I+I G C    +  ++++L  M   G +PN T
Sbjct: 271 DAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            Y  ++  +   GW ++A+ +   +V    I
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVI 358


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 239/517 (46%), Gaps = 54/517 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  +IK   RAG+ D +   +  +  +G +P VV    L+    +  +  +A ++   ++
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P +  +  LI+G  +  +    + VL  +   G +P+ V YN +IG  C  G   
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GM----------- 204
            A ++FD+++    K TV+TY ++ +A   EG+ + A ++LDEM   GM           
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 205 ---------------------------------------CKKGMVGQAFQFVRSLESRGC 225
                                                  CK+G   +A +    +  +G 
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
             ++ + N L+  L      +E  K++  M+  G+E + +TY+I+I   C+  K E+A+ 
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +     ++G  PD ++++  + AYC  G+++  +  LD M S+G  PDIV Y TI+  +C
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K  +  +A +   +L   G  PN   YN +      +G    A+G++  M   GI+P  I
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYNSL+  +C  G+V+EA  +            VI Y III GFCK  +I+E++     M
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +  +PN+ TY  L+      G + EA +L + +VS
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVS 735



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 219/489 (44%), Gaps = 54/489 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R+G+ +E+      MV    +P +V    LI    + ++  +   V++ +E +G  P+  
Sbjct: 263 RSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEV 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI   C+      A ++ D + S+G    VVTYN++  +LC  G +E A ++ D++
Sbjct: 323 IYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM 382

Query: 168 LRDNCKPTVITYTILIQATML-EGQTDKAMKLLDEM-----------------GMCKKGM 209
           L          +  ++   +   G+ D  ++L+ EM                  +CK+G 
Sbjct: 383 LLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGK 442

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +A +    +  +G   ++ + N L+  L      +E  K++  M+  G+E + +TY+I
Sbjct: 443 HEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNI 502

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I   C+  K E+A+ +     ++G  PD ++++  + AYC  G+++  +  LD M S+G
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PDIV Y TI+  +CK  +  +A +   +L   G  PN   YN +      +G    A+
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAI 622

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGM------------------------------ 419
           G++  M   GI+P  ITYNSL+  +C  G+                              
Sbjct: 623 GVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGF 682

Query: 420 -----VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
                +DEAV    +M     RP  ++Y  ++  +CK     E+ ++   M   G  P+ 
Sbjct: 683 CKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDT 742

Query: 475 TTYVLLIEG 483
            +Y  LI G
Sbjct: 743 VSYNTLISG 751



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 188/405 (46%), Gaps = 20/405 (4%)

Query: 30  LLSFDVKETQFMKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           L    V  + F  ++    R  G+ D  L  I  MVA   KP+  + T  I++  +  K 
Sbjct: 384 LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKH 443

Query: 89  NKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
            +A  +   +L K    ++   NALI G C+ N ++ A KVL  +   G   D +TYNIM
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIM 503

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I   C    +E A ++ D +++   KP + T+   ++A    G+ +  + LLD+M     
Sbjct: 504 IQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM----- 558

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
                        +S G +PD+++Y  ++          +  K + E+I  GL PN V Y
Sbjct: 559 -------------KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIY 605

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI    R+G   DA+ VL   K  G+ P   +Y+ L+   C  G ++ A E     I 
Sbjct: 606 NALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCIL 665

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
                 ++ Y  I+  FCK G  D+A+  F+++      PN  +Y T+  A    G+K  
Sbjct: 666 KNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEE 725

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           A  +  EM+S GI PD ++YN+LIS  C    +D+ V    +M S
Sbjct: 726 AFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 200/403 (49%), Gaps = 23/403 (5%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEG 190
           L +RG SP + T NI++ +L   G ++ A KVF ++   N   P V TYT++I+A     
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKA----- 225

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                        +C+ G +  AF  +  LE  G QP V++YN+L+  L   G+ EE  +
Sbjct: 226 -------------LCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQ 272

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L   M+   L P++VT+ ILI+ L R  +  +   VL+  +  G+TP+   Y+ LI  +C
Sbjct: 273 LKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC 332

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           ++G    A+   D M+S G    +V YN I  A CK G  + A +I +++   G   + S
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392

Query: 371 SYNTMFS-ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +N++ +  L  +G     L +I EM+++ ++P++    + I  LC+ G  +EA  +   
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           +        + + N +I G C+   + E+ +VL AM + G + +  TY ++I+       
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512

Query: 490 RAEAMELANALVSMHAISRD--TFKRLNRTFPLLDVYKEISHL 530
             EA++L + ++       D  TF    R +  L   ++I HL
Sbjct: 513 MEEAIQLRDDMIK-RGFKPDLFTFNTFLRAYCNLGKVEDILHL 554



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 199/466 (42%), Gaps = 55/466 (11%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  + +LI    R G   E+L   + MV+ G K  VV    + K   +E +   A +++ 
Sbjct: 321 EVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILD 380

Query: 96  ------------------------------------EILEKYGEPDVFAYNALISGFCKA 119
                                               E++ ++ +P+     A I   CK 
Sbjct: 381 EMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKR 440

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            + E A ++   +  +G   ++ T N +I  LC    ++ A KV   ++    +   ITY
Sbjct: 441 GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            I+IQ                    CK   + +A Q    +  RG +PD+ ++N  LR  
Sbjct: 501 NIMIQFC------------------CKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAY 542

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            N+GK E+   L+ +M S GL+P++VTY  +I   C+      A   L    + GL P+A
Sbjct: 543 CNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNA 602

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
             Y+ LI  Y ++G +  AI  LD M  +G  P  + YN+++   C  G  ++A EIF +
Sbjct: 603 VIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQ 662

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
                    V  Y  +       G    A+    EM  + I P+++TY +L+   C+ G 
Sbjct: 663 CILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGN 722

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            +EA  L  +M S+   P  +SYN +I G C+   +++ +E  A M
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 229/472 (48%), Gaps = 22/472 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LIK   + G+   +   +E M   G  P V     +I  + +  +   A+ +  ++E
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PD + YN LI G C     E A ++L+    RGF+P V+T+  +I   C    I+
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +V   +L  NCK  +  Y +LI   + + +  +A + + EM                
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G VG A +  R +E  GC+P+  +Y+ L+  L+   K  +   L+T+M   G+ 
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P V+TY+ LI   C+  + ++A  +    ++ GLTPD  +Y+ L  A CK GR + A  F
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF 496

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L   +  G +   V Y +++  F K GN D A  + EK+ + GC  +  +Y+ +  AL  
Sbjct: 497 L---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCK 553

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 AL ++ +M   G++ + + Y  +IS + ++G  D A  +  +M S+  +P+  +
Sbjct: 554 QKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATT 613

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           Y + I  +CK  +I E+  ++  M   G  P+  TY + I G G+ G+   A
Sbjct: 614 YTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 241/500 (48%), Gaps = 23/500 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            G   ++ + +  M   GC+ +    T LI+   + R   +A+ ++ ++ + G   ++  
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI G CK  +I  A +VL+ +  RG  P V TYN MI   C  G ++ A  +   + 
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R+ C P   TY ILI     E + D+A +LL++                  G CK   + 
Sbjct: 258 RNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A +   S+ S  C+ D+ +Y +L+  L+   +++E ++ ++EM + GL PNVV Y+ +I
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C+ GK   A++V R  + +G  P+A++Y  LI    +D +L  A+  +  M  DG  
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P ++ Y T++   CK    D A  +FE +   G  P+  +YN +  AL  SG   RA   
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAEEA 493

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            S ++ KG+   ++TY SL+    + G  D A  L+  M +   +    +Y++++   CK
Sbjct: 494 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCK 553

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HAISRDT 510
            +++NE++ +L  M   G K N   Y ++I  +   G    A  + N ++S  H  S  T
Sbjct: 554 QKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATT 613

Query: 511 FKRLNRTFPLLDVYKEISHL 530
           +     ++  +   +E  HL
Sbjct: 614 YTVFISSYCKIGQIEEAEHL 633



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 229/508 (45%), Gaps = 39/508 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + GK   +L     M   GC+P+    + LI    Q++K +KA+ ++  ++
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P V  Y  LI G CK ++ + A ++ + +   G +PD   YN++  +LC  G  E
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE 491

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+     L+R     T +TYT L+      G TD A  L+++M                
Sbjct: 492 EAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLL 548

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  + +A   +  +   G + ++++Y +++  ++  GK +  + +  EMIS G +
Sbjct: 549 QALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 608

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY++ ISS C+ G+ E+A  ++   +  G+ PD  +Y+  I+     G +D A   
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFST 668

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNG----------------NADQALEIFEKLSDVGC 365
           L  MI   C P+   Y  +L  F K                    D   ++ E++   G 
Sbjct: 669 LKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGL 728

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P   +Y+++ +    +     A  +   M  K I P+E  Y  LI C C   +  +AV 
Sbjct: 729 NPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVS 788

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTYVLLIEGI 484
            + DM    F+P + SY+ +I+G C     +++  +   +   +    NE  + +L +G+
Sbjct: 789 FVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGL 848

Query: 485 GYGGWRAEAMELANALVSMHA-ISRDTF 511
              G      +L +A+ + H  I  +T+
Sbjct: 849 LKAGHVDFCSQLLSAMENRHCQIDSETY 876



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 35/340 (10%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + +  +  L+    +AG  D +   IE MV  GCK D    + L++   +++K N+A+ +
Sbjct: 504 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSI 563

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +   G + ++ AY  +IS   K  + + A  + + + S G  P   TY + I S C 
Sbjct: 564 LDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCK 623

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G IE A  +  ++ RD   P V+TY + I                   G    G + +A
Sbjct: 624 IGQIEEAEHLIGEMERDGVAPDVVTYNVFIN------------------GCGHMGYMDRA 665

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNM-----------GKWEEGE-----KLMTEMIS 257
           F  ++ +    C+P+  +Y +LL+  L M           G W   E     +L+  M+ 
Sbjct: 666 FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVK 725

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            GL P  VTYS +I+  C+  + E+A  +    + K ++P+   Y  LI   C       
Sbjct: 726 HGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGK 785

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           A+ F+  MI  G  P + +Y+ ++   C  G+ D+A  +F
Sbjct: 786 AVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLF 825



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 25/236 (10%)

Query: 252 MTEMISRGLEPNVVTYSILISSL--CRDGKTE--DAVDVLRAAKEKGLTPDAYSYDPLIS 307
           + ++++R   P    Y  L+ S+  C D   +  +AVD ++A +  G             
Sbjct: 94  LLQLLARRRAP--ANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVG------------- 138

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
                G L  A   L  M   GC  +  +Y  ++   C+     +AL +   +   GC  
Sbjct: 139 -----GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSL 193

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N+ +Y  +   L   G    A  ++ EM  +G+ P   TYN++I   C+ G + +A+G+ 
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 253

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             ME     P   +YNI+I G C   + +E+ E+L     +G  P   T+  +I G
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIING 308



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 35/220 (15%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER----------------KSNKAVRV 94
           G  D +   ++ M+   C+P+      L+K F +                  + +   ++
Sbjct: 660 GYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQL 719

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +E + K+G  P    Y+++I+GFCKA ++E A  + D +R +  SP+   Y ++I   C 
Sbjct: 720 LERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCD 779

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
             +   A      ++    +P + +Y  LI     EG  DKA  L  ++           
Sbjct: 780 IKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEV 839

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
                  G+ K G V    Q + ++E+R CQ D  +Y+M+
Sbjct: 840 AWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 221/445 (49%), Gaps = 18/445 (4%)

Query: 51   GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
            G+  E+ + +  M   G  PDV+  + ++  + +  + +K  +++E++++ G +P+ + Y
Sbjct: 703  GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762

Query: 110  NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             ++I   C+  ++  A +    +  +G  PD V Y  +I   C RG I +A K F ++  
Sbjct: 763  GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 822

Query: 170  DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             +  P V+TYT +I      G   +A KL  EM                 G CK G +  
Sbjct: 823  RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 882

Query: 213  AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            AF+    +   GC P+V++Y  L+  L   G  +   +L+ EM   GL+PN+ TY+ +++
Sbjct: 883  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942

Query: 273  SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             LC+ G  E+AV ++   +  GL  D  +Y  L+ AYCK G +D A E L  M+  G  P
Sbjct: 943  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002

Query: 333  DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             IV +N ++  FC +G  +   ++   +   G  PN +++N++        +   A  + 
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062

Query: 393  SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             +M S+G+ PD  TY +L+   C+   + EA  L  +M+   F  +V +Y+++I GF K 
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122

Query: 453  RRINESIEVLAAMFEKGCKPNETTY 477
            ++  E+ EV   M  +G   ++  +
Sbjct: 1123 KKFLEAREVFDQMRREGLAADKEIF 1147



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 204/398 (51%), Gaps = 20/398 (5%)

Query: 86   RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
            ++++  + +ME+  K   PDV +Y+ +++G+C+  +++   K+++ ++ +G  P+   Y 
Sbjct: 706  KEAHHLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 763

Query: 146  IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
             +IG LC    +  A + F +++R    P  + YT LI                   G C
Sbjct: 764  SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID------------------GFC 805

Query: 206  KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            K+G +  A +F   + SR   PDV++Y  ++     +G   E  KL  EM  +GLEP+ V
Sbjct: 806  KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865

Query: 266  TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            T++ LI+  C+ G  +DA  V     + G +P+  +Y  LI   CK+G LD A E L  M
Sbjct: 866  TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925

Query: 326  ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
               G  P+I  YN+I+   CK+GN ++A+++  +    G   +  +Y T+  A   SG+ 
Sbjct: 926  WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985

Query: 386  IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             +A  ++ EML KG++P  +T+N L++  C  GM+++   LL  M +    P   ++N +
Sbjct: 986  DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045

Query: 446  ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +  +C    +  +  +   M  +G  P+  TY  L++G
Sbjct: 1046 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 196/378 (51%), Gaps = 18/378 (4%)

Query: 105  DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
            +V +YN +I   C+  +I+ A+ +L  +  +G++PDV++Y+ ++   C  G ++  +K+ 
Sbjct: 688  NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 165  DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            + + R   KP    Y  +I                    +C+   + +A +    +  +G
Sbjct: 748  EVMKRKGLKPNSYIYGSIIGL------------------LCRICKLAEAEEAFSEMIRQG 789

Query: 225  CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
              PD + Y  L+      G      K   EM SR + P+V+TY+ +IS  C+ G   +A 
Sbjct: 790  ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849

Query: 285  DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
             +      KGL PD+ ++  LI+ YCK G +  A    ++MI  GC P++V Y T++   
Sbjct: 850  KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909

Query: 345  CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            CK G+ D A E+  ++  +G  PN+ +YN++ + L  SG+   A+ ++ E  + G+  D 
Sbjct: 910  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969

Query: 405  ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            +TY +L+   C+ G +D+A  +L +M     +PT++++N+++ GFC    + +  ++L  
Sbjct: 970  VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029

Query: 465  MFEKGCKPNETTYVLLIE 482
            M  KG  PN TT+  L++
Sbjct: 1030 MLAKGIAPNATTFNSLVK 1047



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 18/378 (4%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            R  K  E+      M+  G  PD V+ T LI  F +      A +   E+  +   PDV 
Sbjct: 771  RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 830

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             Y A+ISGFC+   +  A K+   +  +G  PD VT+  +I   C  G ++ AF+V + +
Sbjct: 831  TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            ++  C P V+TYT LI     EG  D A +LL EM                 G+CK G +
Sbjct: 891  IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 950

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             +A + V   E+ G   D ++Y  L+      G+ ++ ++++ EM+ +GL+P +VT+++L
Sbjct: 951  EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010

Query: 271  ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
            ++  C  G  ED   +L     KG+ P+A +++ L+  YC    L  A      M S G 
Sbjct: 1011 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 1070

Query: 331  LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             PD   Y  ++   CK  N  +A  +F+++   G   +VS+Y+ +          + A  
Sbjct: 1071 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 1130

Query: 391  MISEMLSKGIEPDEITYN 408
            +  +M  +G+  D+  ++
Sbjct: 1131 VFDQMRREGLAADKEIFD 1148



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 3/288 (1%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V + +  G  P V  +++  + L++ G   E  ++  +M++ GL  +V + ++ ++ L 
Sbjct: 607 LVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 664

Query: 276 RD-GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           +D  KT  A+ V R   E G+  +  SY+ +I   C+ GR+  A   L  M   G  PD+
Sbjct: 665 KDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 724

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           ++Y+T++  +C+ G  D+  ++ E +   G  PN   Y ++   L        A    SE
Sbjct: 725 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ +GI PD + Y +LI   C+ G +  A     +M S    P V++Y  II GFC+   
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + E+ ++   MF KG +P+  T+  LI G    G   +A  + N ++ 
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 18/307 (5%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F +LI    +AG   ++      M+  GC P+VV  T LI    +E   + A  ++  + 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G +P++F YN++++G CK+  IE A K++    + G + D VTY  ++ + C  G ++
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A ++  ++L    +PT++T+ +L+    L G  +   KLL+ M                
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 203  -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               C +  +  A    + + SRG  PD  +Y  L++        +E   L  EM  +G  
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             +V TYS+LI    +  K  +A +V    + +GL  D   +D       K  R D  ++ 
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 1166

Query: 322  LDYMISD 328
            +D +I +
Sbjct: 1167 IDEIIEN 1173


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 237/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV     P+      LI  +    +  +AVRV + + ++   PDV 
Sbjct: 269 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 328

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L+   CK  +I+ A  V D +  +G +PDV +YNIM+    ++G +     +FD +
Sbjct: 329 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 388

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P   T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 389 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 448

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +YN L++     G   + ++L++E+++ G+  ++V +S +
Sbjct: 449 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 508

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL PDA  Y+ L+  YC  G+++ A+   D M+S G 
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+   Y+ +   L+ +G  + A  
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  D  TYN ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 629 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++      P+  TY ++I  +   G   EA ++ +++
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 738



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 241/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C P+VV    +I  FF+E   NKA  +  E++++   P
Sbjct: 200 KSGQADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 255

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D+  YN+++   CKA  ++ A   L ++ ++   P+  TYN +I    S G  + A +VF
Sbjct: 256 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 315

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF---VRSLE 221
            ++ R +  P V+T ++L+ +    G+  +A  + D M M  KG     F +   +    
Sbjct: 316 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM--KGQNPDVFSYNIMLNGYA 373

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 PD  ++N+L++   N G  ++   +  EM   G++P+VV
Sbjct: 374 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 433

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  +I++LCR GK +DA++      ++G+ PD Y+Y+ LI  +C  G L  A E +  +
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 493

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P+   YN +       G  
Sbjct: 494 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 553

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+ + Y +L++  C+ G +DE + L  +M     +P+ I Y+II
Sbjct: 554 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 613

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G  +  R   +      M E G   +  TY +++ G+       EA+ L   L +M+
Sbjct: 614 IDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 672



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 225/473 (47%), Gaps = 29/473 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIE 123
           GC PDV   + L+K    + KS +A  ++ ++ + G    P+V AYN +I GF K   + 
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +   +  RG  PD+VTYN ++ +LC    ++ A     Q++     P   TY  LI
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                 GQ  +A+++  EM                        PDV++ +ML+ +L   G
Sbjct: 300 YGYSSTGQWKEAVRVFKEM------------------RRHSILPDVVTLSMLMGSLCKYG 341

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K +E   +   M  +G  P+V +Y+I+++     G   D  D+       G+ PD Y+++
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 401

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI AY   G LD A+   + M   G  PD+V Y T++AA C+ G  D A+E F ++ D 
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  +YN +     + G  ++A  +ISE+++ G+  D + ++S+I+ LC+ G V +A
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +     +    P  + YN+++ G+C   ++ +++ V  AM   G +PN   Y  L+ G
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581

Query: 484 IGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEIS 528
               G   E + L   ++         +++I  D      RT P    + E++
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 233/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + ++++   L++ F + +++++A+ ++  L +  E    P
Sbjct: 126 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL--LHRTPELGCVP 183

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SP+VV YN +I      G +  A  
Sbjct: 184 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 243

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY  ++ A                  +CK   + +A  F+R + +
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHA------------------LCKARAMDKAEAFLRQMVN 285

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P+  +YN L+    + G+W+E  ++  EM    + P+VVT S+L+ SLC+ GK ++
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY+ +++ Y   G L    +  D M+ DG  PD   +N ++ 
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  YN LI   C  G + +A  L+ ++ +      ++ ++ II   CK  R+ ++  + 
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 526 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 218/441 (49%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M  +   PDVV  + L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +++G+     +     + D +   G +PD  T+N++I +  + GM++ A  +F+++  
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 425

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TY  +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 485

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G   D++ ++ ++  L  +G+  + + +    ++ GL P+ V Y++L+ 
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + Y+ I+    + G    A   F ++++ G   ++ +YN +   L+ +     A+ + 
Sbjct: 606 STILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 665

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ + IT N++I  + +   V+EA  L   +  +R  P+V++Y+I+I    K 
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+PN
Sbjct: 726 GLVEEAEDMFSSMQNAGCEPN 746



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 23/406 (5%)

Query: 122 IELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + L N+   R +  R  SP   TY I++         E A   F QLLR   +  +I   
Sbjct: 94  VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 153

Query: 181 ILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRSLES 222
            L++      +TD+A+ +L     E+G              +C +G  GQA   +R +  
Sbjct: 154 HLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 213

Query: 223 RG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            G  C P+V++YN ++      G   +   L  EM+ RG+ P++VTY+ ++ +LC+    
Sbjct: 214 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 273

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A   LR    K + P+ ++Y+ LI  Y   G+   A+     M     LPD+V  + +
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + + CK G   +A ++F+ ++  G  P+V SYN M +   + G  +    +   ML  GI
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD  T+N LI      GM+D+A+ +  +M     +P V++Y  +I   C+  ++++++E
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--MH 504
               M ++G  P++  Y  LI+G    G   +A EL + +++  MH
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 202/452 (44%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    ++M   G  PDV     ++  +  +        + +++   G  PD +
Sbjct: 339 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 398

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  +     ++ A  + + +R  G  PDVVTY  +I +LC  G ++ A + F+Q+
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P    Y  LIQ     G   KA +L+ E+                  +CK G V
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A        + G  PD + YNML+     +GK E+  ++   M+S G+EPNVV Y  L
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C+ G+ ++ + + R   ++G+ P    Y  +I    + GR   A      M   G 
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN +L    KN   D+A+ +F++L  +    N+ + NTM   ++ +     A  
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + +    + P  +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 758

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K   I  +   L+ + E+       T +LL++
Sbjct: 759 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 790



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 193/429 (44%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KPDVV    +I    +  K + A+ +  +++
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AYN LI GFC    +  A +++  + + G   D+V ++ +I +LC  G + 
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y +L+    L G+ +KA+++ D M                
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM---------------- 563

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ RG++P+ + YSI+I  L   G
Sbjct: 564 --VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  D  +Y+ ++    K+   D AI     + +     +I+  N
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 681

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++    +    ++A ++F  +S     P+V +Y+ M + L   G    A  M S M + 
Sbjct: 682 TMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 741

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EP+    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 742 GCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 801

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 802 IRFLPAKYH 810



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 51/318 (16%)

Query: 244 KWEEGEKLMTEMISRG---LEPNVVTYSILI-----SSLCRDGKTEDAVDVLRAAKE--- 292
           + EE   L+ E+  RG   LE ++  +   +     S+ CR G         RAA     
Sbjct: 47  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 106

Query: 293 -KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + L+P +++Y  L+    +  R +LA+ F   ++  G   +I+  N +L  FC+    D
Sbjct: 107 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 166

Query: 352 QALEI--------------------FEKLSDVG------------------CPPNVSSYN 373
           +AL+I                     + L D G                  C PNV +YN
Sbjct: 167 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+    +  GD  +A  +  EM+ +GI PD +TYNS++  LC+   +D+A   L  M + 
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R  P   +YN +I G+  T +  E++ V   M      P+  T  +L+  +   G   EA
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 494 MELANALVSMHAISRDTF 511
            ++ + + +M   + D F
Sbjct: 347 RDVFDTM-AMKGQNPDVF 363


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 202/399 (50%), Gaps = 20/399 (5%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNI 146
           + K VR +E+L +   P+   YN +I+GFC   +++   +++  +R RG  +PD  TY  
Sbjct: 129 AGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYAT 188

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           +I   C  G +E A KVFD++L +   +P  + Y  LI                   G C
Sbjct: 189 VISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIG------------------GYC 230

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
            +G +  A ++   +  RG    V +YN+ + TL   G+  E   L+ EM  +GL P+  
Sbjct: 231 DQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAF 290

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ILI+  C++GK + A+ +      KG+     +Y  LI A    G +       +  
Sbjct: 291 TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+  YN ++ + C  G+ D+A EI  ++      P+  +YNT+   L   G  
Sbjct: 351 VRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL 410

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A G+I EM  +GI+PD ++YN+LIS     G + +AV +  +M    F PT+++YN +
Sbjct: 411 DEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAM 470

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G C   +  ++ +++  M   G  P+++TY+ LIEG+
Sbjct: 471 IKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 197/395 (49%), Gaps = 22/395 (5%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +N ++   C A +   A ++L ++ S    P+ VTYN +I   C+RG +++  ++  ++ 
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMR 174

Query: 169 -RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R    P   TY  +I      G+ + A K+ DEM                 L     +P
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM-----------------LTEGKVEP 217

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + + YN L+    + G  E   +   EM+ RG+   V TY++ + +L  +G+  +A  ++
Sbjct: 218 NAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALV 277

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               EKGL PDA++Y+ LI+ YCK+G+   A++  + M+  G    +V Y +++ A    
Sbjct: 278 EEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMK 337

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +   +F      G  P++  YN + ++  + GD  RA  ++ EM  K I PD++TY
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTY 397

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+  LC  G +DEA GL+ +M     +P ++SYN +I G+     I ++++V   M  
Sbjct: 398 NTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG 457

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           KG  P   TY  +I+G+   G   +A +L   +V 
Sbjct: 458 KGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVG 492



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 59/413 (14%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L   +  T F  +++    AGK   +L  +  M +    P+ V    +I  F    +   
Sbjct: 110 LRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQA 165

Query: 91  AVRVM-EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIM 147
            + +M E+ E+ G  PD + Y  +ISG+CK  ++E A KV D + + G   P+ V YN +
Sbjct: 166 GIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNAL 225

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG---- 203
           IG  C +G +E A +   +++      TV TY + +    +EG+  +A  L++EMG    
Sbjct: 226 IGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGL 285

Query: 204 -------------MCKKG-----------MVGQAFQ--------FVRSLE---------- 221
                         CK+G           MVG+  +         + +L           
Sbjct: 286 APDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR 345

Query: 222 ------SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                  RG +PD+  YN L+ +    G  +   ++M EM  + + P+ VTY+ L+  LC
Sbjct: 346 LFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLC 405

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+ ++A  ++    ++G+ PD  SY+ LIS Y   G +  A++  D M+  G  P ++
Sbjct: 406 LLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLL 465

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            YN ++   C NG    A ++ +++   G  P+ S+Y ++   L +  +++ A
Sbjct: 466 TYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAA 518



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 18/260 (6%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           F  G+  E+   +E M   G  PD      LI  + +E K  KA+++ E++   G    V
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             Y +LI        ++  +++ +    RG  PD+  YN +I S C+ G ++ AF++  +
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           + +    P  +TY  L++   L G+ D+A  L++EM                 G   KG 
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    +  +G  P +++YN +++ L   G+  + E L+ EM+  G+ P+  TY  
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 270 LISSLCRDGKTEDAVDVLRA 289
           LI  L  + +   A D ++A
Sbjct: 505 LIEGLTTEDERLAAGDDVKA 524


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 233/488 (47%), Gaps = 56/488 (11%)

Query: 51  GKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           GK  ++   ++ M    C+ P+ V    ++  + ++ +   A+R+++ +EK G E D++ 
Sbjct: 244 GKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYT 301

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I   CK  +   A  +L R+R    +PD  +YN +I      G I  A  +F+Q+L
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           R + KP+V TYT LI      G+TD+A ++L EM                 G CK   +G
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLG 421

Query: 212 QAFQFVRSLESR-----------------------------------GCQPDVISYNMLL 236
            A   ++ L SR                                   G  PDVI+Y+ L+
Sbjct: 422 PALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALI 481

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             +  MG   E +++++ M   G+ PN V Y+ L+   C+ G  ++A+         GL 
Sbjct: 482 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 541

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
            ++  ++ L+ ++ ++G +  A +F  YM       D+ ++N I+ ++C+ GN  +A  +
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 601

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           ++ +   G PP++ +Y ++   L   G  ++A   +  +L K    DE T N+L+  +C+
Sbjct: 602 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 661

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +DEA+ L   M +    P   +Y I++ GFCK  ++  ++ +L  M EKG  P+   
Sbjct: 662 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 721

Query: 477 YVLLIEGI 484
           Y  L+ G+
Sbjct: 722 YTCLLNGL 729



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 222/502 (44%), Gaps = 54/502 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI   F  GK + ++Y    M+    KP V   T LI  + +  ++++A RV+ 
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G  P    Y+AL++G+CK +++  A  ++  LRSR  S +   Y I+I   C  G
Sbjct: 394 EMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLG 453

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------ 203
            +  A ++   +L D   P VITY+ LI      G   +  ++L  M             
Sbjct: 454 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 513

Query: 204 -----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                 CK G   +A ++   +   G   + + +N LL +    G   E E+    M   
Sbjct: 514 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            +  +V +++ +I S C+ G   +A  V       G  PD  +Y  L+   C+ G L  A
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            EF+ Y++   C  D    NT+L   CK+G  D+AL++ EK+      P+  +Y  +   
Sbjct: 634 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL-----------------CRDGM-- 419
               G  + AL ++  ML KG+ PD I Y  L++ L                 C++G+  
Sbjct: 694 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA 753

Query: 420 -----------------VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
                            ++E   L+ +M      P+  SYNI++ G+ K  +++ ++ + 
Sbjct: 754 DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLY 813

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M ++G KP+  TY LLI G+
Sbjct: 814 RDMVKEGIKPDNVTYRLLIFGL 835



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 222/467 (47%), Gaps = 36/467 (7%)

Query: 31   LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            +SFDV    F  +I    + G   E+    ++MV +G  PD+     L++   Q     +
Sbjct: 575  ISFDV--ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 632

Query: 91   AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            A   M  +LEK    D    N L+ G CK   ++ A  + +++ +R   PD  TY I++ 
Sbjct: 633  AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 692

Query: 150  SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
              C RG +  A  +   +L     P  I YT L+   + EGQ   A  +  E+ +CK+G+
Sbjct: 693  GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI-ICKEGL 751

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                              D I+YN ++   L  G+  E E+LM  M    + P+  +Y+I
Sbjct: 752  YA----------------DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 795

Query: 270  LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            L+    + G+    + + R   ++G+ PD  +Y  LI   C+ G +++A++FL+ M+ +G
Sbjct: 796  LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEG 855

Query: 330  CLPDIVNYNTILAAFCKN----------------GNADQALEIFEKLSDVGCPPNVSSYN 373
              PD + ++ ++ AF +                 G+ D A E+ E +  +G  P+  + +
Sbjct: 856  VFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAES 915

Query: 374  TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            ++   L   G    A+ + S ++  G+ P   T+ +L+  LC++  +D+A  L   MES 
Sbjct: 916  SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 975

Query: 434  RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
              +  V++YN++I G C  + I +++++   M  KG  PN TTY+ L
Sbjct: 976  GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 1022



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 198/426 (46%), Gaps = 18/426 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLD 130
           DV  C  ++     + K +KA  +++ ++    P+   YN +++ + K  + + A ++LD
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
            +   G   D+ TYNIMI  LC       A+ +  ++   N  P   +Y  LI     EG
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG 348

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
           + + A+ + ++M               +SL     +P V +Y  L+      G+ +E  +
Sbjct: 349 KINLAIYIFNQM-------------LRQSL-----KPSVATYTALIDGYCRNGRTDEARR 390

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ EM   G+ P+ +TYS L++  C+  K   A+D+++  + + ++ +   Y  LI  +C
Sbjct: 391 VLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFC 450

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G +  A + L  M++DG  PD++ Y+ ++   CK G   +  EI  ++   G  PN  
Sbjct: 451 QLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNV 510

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            Y T+      +G    AL    ++   G+  + + +N+L+    R+GM+ EA      M
Sbjct: 511 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM 570

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
              +    V S+N II  +C+   + E+  V   M   G  P+  TY  L+ G+  GG  
Sbjct: 571 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 630

Query: 491 AEAMEL 496
            +A E 
Sbjct: 631 VQAKEF 636



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 213/471 (45%), Gaps = 55/471 (11%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S  +  T +  LI    + G+  ++   ++ M+A+G  PDV+  + LI    +    ++ 
Sbjct: 434 SISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHET 493

Query: 92  VRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGF------------- 137
             ++  ++K G  P+   Y  L+  FCKA   + A K    +   G              
Sbjct: 494 KEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCS 553

Query: 138 ----------------------SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
                                 S DV ++N +I S C RG +  AF V+D ++R    P 
Sbjct: 554 FYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 613

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           + TY  L++                  G+C+ G + QA +F+  L  + C  D  + N L
Sbjct: 614 ICTYGSLLR------------------GLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L  +   G  +E   L  +M++R + P+  TY+IL+   C+ GK   A+ +L+   EKGL
Sbjct: 656 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 715

Query: 296 TPDAYSYDPLISAYCKDGRLDLA-IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            PD  +Y  L++    +G++  A   F + +  +G   D + YN+++  + K G  ++  
Sbjct: 716 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 775

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +   + +    P+ +SYN +       G   R L +  +M+ +GI+PD +TY  LI  L
Sbjct: 776 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 835

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           C  G+++ AV  L  M      P  ++++I+I  F +  +++ ++++ + M
Sbjct: 836 CEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 183/391 (46%), Gaps = 19/391 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           ++F+ + L++ + K  ++  A   +  +   GF   + + N ++ +L      E  +   
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            + L       V T  I++ +   +G+  KA  +L +M  C+                  
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR------------------ 260

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+ ++YN +L   +  G+ +   +++ +M   G+E ++ TY+I+I  LC+  ++  A 
Sbjct: 261 -LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAY 319

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L+  +E  LTPD  SY+ LI  +  +G+++LAI   + M+     P +  Y  ++  +
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+NG  D+A  +  ++   G  P+  +Y+ + +          AL +I  + S+ I  + 
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINR 439

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             Y  LI   C+ G V +A  +L  M +    P VI+Y+ +I G CK   I+E+ E+L+ 
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 499

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           M + G  PN   Y  L+      G   EA++
Sbjct: 500 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 530



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 179/389 (46%), Gaps = 35/389 (8%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYGEPDVF 107
            + G  DE+L   E MV     PD    T L+  F +  K   A+ ++++ LEK   PD  
Sbjct: 661  KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTI 720

Query: 108  AYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AY  L++G     Q++ A+ +   +  + G   D + YN M+      G I    ++   
Sbjct: 721  AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 780

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
            +  +   P+  +Y IL+   + +GQ  + + L  +M                 G+C+ G+
Sbjct: 781  MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 840

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRT------------LLNMGKW----EEGEKLMT 253
            +  A +F+  +   G  PD +++++L++             L +  KW    +   +L  
Sbjct: 841  IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE 900

Query: 254  EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            +M + G+ P+ V  S ++  LC+ GK E+A+ V  +    G+ P   ++  L+   CK+ 
Sbjct: 901  DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 314  RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            ++D A      M S G   D+V YN ++   C       AL+++E++   G  PN+++Y 
Sbjct: 961  KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 374  TMFSALWSSGDKIRALGMISEMLSKGIEP 402
            T+  A++++G       ++ ++  +GI P
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDIEDRGIVP 1049



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 6/338 (1%)

Query: 56   SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALIS 114
            S  F E +   G   D +    ++  + +  + N+  R+M  + E    P   +YN L+ 
Sbjct: 739  SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 798

Query: 115  GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
            G+ K  Q+     +   +   G  PD VTY ++I  LC  G+IE A K  ++++ +   P
Sbjct: 799  GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFP 858

Query: 175  TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              + + ILI+A   + +   A++L   M     G +  AF+    +++ G  P  ++ + 
Sbjct: 859  DNLAFDILIKAFSEKSKMSNALQLFSYMKWV--GDIDGAFELKEDMKALGVVPSEVAESS 916

Query: 235  LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            ++R L   GK EE   + + ++  G+ P + T++ L+  LC++ K +DA  + +  +  G
Sbjct: 917  IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            L  D  +Y+ LI+  C    +  A++  + M S G LP+I  Y T+  A    G      
Sbjct: 977  LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGE 1036

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            ++ + + D G  P   SY    S  W   + I+ L  I
Sbjct: 1037 KLLKDIEDRGIVP---SYKHPESLEWRMENAIKRLNTI 1071


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 246/536 (45%), Gaps = 38/536 (7%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP-DVVMCTKL 78
           +SA  RP+T           + K ++    AG   E++  +  M  +G  P +      +
Sbjct: 19  ASAGARPDTF---------AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 69

Query: 79  IKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I   ++  +   AV V  E+ E+   P+   YN +I G  K   +E   ++ D++   G 
Sbjct: 70  IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 129

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            P+ +TYN+++  LC  G +     + D++      P   TY+IL       G +   + 
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L  +                  G+CK G V  A + ++SL + G  P  + YN L+    
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 249

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ E       +M SR ++P+ +TY+ LI+ LC+  +  +A D+L   ++ G+ P   
Sbjct: 250 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 309

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +++ LI AY + G+L+     L  M  +G  P++V+Y +I+ AFCKNG   +A+ I + +
Sbjct: 310 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 369

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
                 PN   YN +  A    G   +A  ++ +M S GI P  +TYN LI  LC    +
Sbjct: 370 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 429

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  ++  + + R  P  +SYN +I   C    I++++++   M + G K    TY  L
Sbjct: 430 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 489

Query: 481 IEGIGYGGWRAEAME------LANALV---SMHAISRDTFKRLNRTFPLLDVYKEI 527
           I G+G G  R   ME      + N +V   ++H I  + + +        D+ KE+
Sbjct: 490 ISGLG-GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 18/486 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   +RAG+  +++   + M      P+ +    +I    +        R+ + +  +G
Sbjct: 69  VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN L+SG C+A ++   + +LD + S+   PD  TY+I+   L   G  ++  
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F + L++       T +IL+     +G+   A ++L  +                 G 
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G +  AF     ++SR  +PD I+YN L+  L    +    + L+ EM   G+ P V
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ LI +  R G+ E    VL   +E GL P+  SY  +++A+CK+G++  A+  LD 
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     LP+   YN I+ A+ ++G  DQA  + EK+   G  P++ +YN +   L +   
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 428

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I+ + +  + PD ++YN+LIS  C  G +D+A+ L   M     + TV +Y+ 
Sbjct: 429 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 488

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     R+NE   +   M +    P+   + +++E     G   +A +L   ++   
Sbjct: 489 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548

Query: 505 AISRDT 510
               DT
Sbjct: 549 NNHDDT 554



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 169/386 (43%), Gaps = 53/386 (13%)

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           +L S G      + F  L     +P    +   +QA +  G   +A+ +L  M       
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      GM + G  G A +    +  R   P+ I+YN ++   +  G  E G +L
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY--------- 302
             +M+  GL+PN +TY++L+S LCR G+  +   +L     + + PD ++Y         
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 303 --------------------------DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
                                       L++  CKDG++ +A E L  +++ G +P  V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT++  +C+ G  + A   F ++      P+  +YN + + L  +     A  ++ EM 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P   T+N+LI    R G +++   +L +M+    +P V+SY  I+  FCK  +I 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
           E++ +L  MF K   PN   Y  +I+
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIID 386



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCLC 415
           F  L+  G  P+  ++N    A  ++GD   A+GM+  M   G   P+  +YN +I+ + 
Sbjct: 15  FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G   +AV +  +M      P  I+YN +I G  K   +     +   M   G KPN  
Sbjct: 75  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
           TY +L+ G+   G   E   L + + S
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMAS 161


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 236/457 (51%), Gaps = 26/457 (5%)

Query: 33  FDVKET--QFMKLIKRSFRAGKFDESLYFIESMV-ANGCK--PDVVMCTKLIKKFFQERK 87
           F+ K T   F  ++    + G F  +L F   ++ A G    P+V+    +IK   +   
Sbjct: 125 FECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGL 184

Query: 88  SNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
            + AV++   +     +PDV+ Y  L+ G CKA++I+ A  +LD ++  G  P  VT+N+
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 244

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I  LC +G +    K+ D +    C P  +TY  LI    L+G+ +KA+ LLD M    
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM---- 300

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                          S  C P+V++Y  ++  L+  G+  +G +++  M  RG   N   
Sbjct: 301 --------------VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YS LIS L ++GK+++A+ + +    K    +   Y  +I   C+DG+ D A+E L  M 
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           ++ C P+   Y++++  F + GN  +A+E+++ ++      N   Y+ +   L   G   
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNI 444
            A+ + ++ML KG +PD + Y S+I+ L   G+V++A+ L  +M  +    +P V++YNI
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           ++   CK   I+ +I++L +M ++GC P+  T ++ +
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFL 563



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 203/456 (44%), Gaps = 56/456 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           + +LI  +      +   KVLDR+R          + ++  +     + E A  +FD++ 
Sbjct: 63  FYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMA 122

Query: 169 RD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------GMCKK 207
            +  CK TV ++  ++   + EG   +A++  + +                     MCK 
Sbjct: 123 YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKV 182

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G+V  A Q  R +    CQPDV +Y  L+  L    + +E   L+ EM   G  P+ VT+
Sbjct: 183 GLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF 242

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI+ LC+ G       ++     KG  P+  +Y+ LI   C  G+L+ AI  LD M+S
Sbjct: 243 NVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 302

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C+P++V Y TI+    K G A     +   + + G   N   Y+ + S L+  G    
Sbjct: 303 SKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQE 362

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV-------- 439
           A+ +  EM  K  E + I Y+++I  LCRDG  DEA+ +L +M + R +P          
Sbjct: 363 AMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMK 422

Query: 440 ---------------------------ISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
                                      + Y+++I G CK  ++ E++ V A M  KGCKP
Sbjct: 423 GFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKP 482

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           +   Y  +I G+   G   +A++L N ++     S+
Sbjct: 483 DVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 182/395 (46%), Gaps = 61/395 (15%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT---YTILIQATMLEGQTDKAMKLL 199
           T+  +I +  + G  +S  KV D++    C+  V+    + ++ +A       +KA+ L 
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRM---RCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLF 118

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SR 258
           D M          A++F        C+  V S+N +L  ++  G +    +    +I ++
Sbjct: 119 DRM----------AYEF-------ECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAK 161

Query: 259 G--LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           G  + PNV+T++++I ++C+ G  +DAV + R        PD Y+Y  L+   CK  R+D
Sbjct: 162 GVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRID 221

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A+  LD M  DGC P  V +N ++   CK G+  +  ++ + +   GC PN  +YNT+ 
Sbjct: 222 EAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLI 281

Query: 377 SALWSSGDKIRALGMISEMLS-----------------------------------KGIE 401
             L   G   +A+ ++  M+S                                   +G  
Sbjct: 282 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYH 341

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +E  Y++LIS L ++G   EA+ L  +M         I Y+ +I G C+  + +E++EV
Sbjct: 342 VNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEV 401

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           L+ M    CKPN  TY  L++G    G   +A+E+
Sbjct: 402 LSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM 436



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 17/243 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           + V E  +  LI   F+ GK  E++   + M    C+ + ++ + +I    ++ K ++A+
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V+ E+     +P+ + Y++L+ GF +A     A ++   +    F+ + V Y+++I  L
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G ++ A  V+ Q+L   CKP V+ Y  +I      G  + A++L +EM +C++    
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEM-LCQE---- 514

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                         QPDV++YN+LL  L           L+  M+ RG +P++VT  I +
Sbjct: 515 -----------PDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFL 563

Query: 272 SSL 274
            +L
Sbjct: 564 RTL 566



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +F   E  +  LI    + GK  E++     M+  GCKPDVV    +I           A
Sbjct: 444 NFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDA 503

Query: 92  VRV---MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +++   M   E   +PDV  YN L++  CK + I  A  +L+ +  RG  PD+VT  I +
Sbjct: 504 LQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFL 563

Query: 149 GSL 151
            +L
Sbjct: 564 RTL 566


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 237/460 (51%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + D+++   L+K F + +++++A+ ++  L +  E    P
Sbjct: 127 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL--LHRTPELGCVP 184

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SPDVV Y  +I      G +  A  
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY+ ++ A                  +CK   +G+A  F+R + +
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHA------------------LCKARAMGKAEAFLRQMVN 286

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  PD  +YN L+    + G+W+E  ++  EM    + P+VVT ++L+ SLC+ GK ++
Sbjct: 287 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKE 346

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY  +++ Y   G L    +  D M+ DG  PDI  ++ ++ 
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIK 406

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 407 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 466

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  Y+ LI   C  G + +A  L++++ +   R  ++ ++ II   CK  RI ++  + 
Sbjct: 467 DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 241/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C PDVV  T +I  FF+E   NKA  +  E++++   P
Sbjct: 201 KSGQADDLL----RMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPP 256

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D+  Y++++   CKA  +  A   L ++ ++G  PD  TYN +I    S G  + A +VF
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 316

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF---VRSLE 221
            ++ R +  P V+T  +L+ +    G+  +A  + D M M  KG     F +   +    
Sbjct: 317 KEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM--KGQNPDVFSYKIMLNGYA 374

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 PD+ ++++L++   N G  ++   +  EM   G++P+VV
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 434

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ +I++LCR GK +DA++      ++G+ PD Y+Y  LI  +C  G L  A E +  +
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEI 494

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P+   Y+ +       G  
Sbjct: 495 MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKM 554

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+ + Y +L++  C+ G +DE + L  +M     +P+ I YNII
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G     R   +      M E G   N+ TY +++ G        EA+ L   L +M+
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 217/432 (50%), Gaps = 18/432 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F+  MV  G  PD      LI  +    +  +AVRV + + ++   PDV   N L+   C
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  +I+ A  V D +  +G +PDV +Y IM+    ++G +     +FD +L D   P + 
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           T+++LI+A    G  DKAM + +EM                  +C+ G +  A +    +
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  PD  +Y+ L++     G   + ++L+ E+++ G+  ++V +S +I++LC+ G+ 
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            DA ++       G  PDA  Y  L+  YC  G+++ A+   D M+S G  P++V Y T+
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  +CK G  D+ L +F ++   G  P+   YN +   L+ +G  + A     EM   GI
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
             ++ TYN ++    ++   DEA+ L  ++ +   +  +I+ N +I G  +TRR+ E+ +
Sbjct: 640 AINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 699

Query: 461 VLAAMFEKGCKP 472
           + A++   G  P
Sbjct: 700 LFASISRSGLVP 711



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 191/400 (47%), Gaps = 23/400 (5%)

Query: 119 ANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDNCKPTV 176
           A  + L N+   R +  R  SP   TY I++   C+R    E A   F QLLR   +  +
Sbjct: 92  ALAVALFNRAASRAQGPRVLSPTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVDI 150

Query: 177 ITYTILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVR 218
           I    L++      +TD+A+ +L     E+G              +C +G  GQA   +R
Sbjct: 151 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 210

Query: 219 SLESRG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            +   G  C PDV++Y  ++      G   +   L  EM+ RG+ P++VTYS ++ +LC+
Sbjct: 211 MMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 270

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
                 A   LR    KG+ PD ++Y+ LI  Y   G+   A+     M     LPD+V 
Sbjct: 271 ARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 330

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            N ++ + CK G   +A ++F+ ++  G  P+V SY  M +   + G  +    +   ML
Sbjct: 331 LNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML 390

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             GI PD  T++ LI      GM+D+A+ +  +M     +P V++Y  +I   C+  +++
Sbjct: 391 GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +++E    M ++G  P++  Y  LI+G    G   +A EL
Sbjct: 451 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 195/409 (47%), Gaps = 18/409 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M  +   PDVV    L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             +++G+     +     + D +   G +PD+ T++++I +  + GM++ A  +F+++  
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRD 426

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TYT +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 486

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G + D++ ++ ++  L  +G+  + + +    ++ G  P+ V YS+L+ 
Sbjct: 487 AKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMD 546

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 547 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 606

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + YN I+      G    A   F ++++ G   N  +YN +    + +     A+ + 
Sbjct: 607 STILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLF 666

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            E+ +  ++ D IT N++I+ + +   V+EA  L   +  +   P V++
Sbjct: 667 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 160/333 (48%), Gaps = 19/333 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KPDVV  T +I    +  K + A+ +  +++
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AY+ LI GFC    +  A +++  + + G   D+V ++ +I +LC  G I 
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y++L+    L G+ +KA+++ D M                
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM---------------- 564

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ +G++P+ + Y+I+I  L   G
Sbjct: 565 --VSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  +  +Y+ ++  + K+   D AI     + +     DI+  N
Sbjct: 623 RTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLN 682

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           T++A   +    ++A ++F  +S  G  P V +
Sbjct: 683 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 38/283 (13%)

Query: 258 RGLEPNVVTYSI-----------------------------------LISSLCRDGKTED 282
           R L P   TY+I                                   L+   C   +T++
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 283 AVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYNT 339
           A+D+ L    E G  PD +SY  L+ + C  G+   A + L  M   G  C PD+V Y T
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  F K G+ ++A ++F+++   G PP++ +Y+++  AL  +    +A   + +M++KG
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD  TYN+LI      G   EAV +  +M      P V++ N+++   CK  +I E+ 
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +V   M  KG  P+  +Y +++ G    G   +  +L + ++ 
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG 391


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 236/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV     P+      LI  +    +  +AVRV + + ++   PDV 
Sbjct: 279 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 338

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L+   CK  +I+ A  V D +  +G +PDV +YNIM+    ++G +     +FD +
Sbjct: 339 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P   T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 399 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +YN L++     G   + ++L++E+++ G+  ++V +S +
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 518

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL PDA  Y  L+  YC  G+++ A+   D M+S G 
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+   Y+ +   L+ +G  + A  
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  D  TYN ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 639 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++      PN  TY ++I  +   G   EA ++ +++
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM 748



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 241/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C P+VV    +I  FF+E   NKA  +  E++++   P
Sbjct: 210 KSGQADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 265

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D+  YN+++   CKA  ++ A   L ++ ++   P+  TYN +I    S G  + A +VF
Sbjct: 266 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 325

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF---VRSLE 221
            ++ R +  P V+T ++L+ +    G+  +A  + D M M  KG     F +   +    
Sbjct: 326 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM--KGQNPDVFSYNIMLNGYA 383

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 PD  ++N+L++   N G  ++   +  EM   G++P+VV
Sbjct: 384 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 443

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  +I++LCR GK +DA++      ++G+ PD Y+Y+ LI  +C  G L  A E +  +
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 503

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P+   Y+ +       G  
Sbjct: 504 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 563

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+ + Y +L++  C+ G +DE + L  +M     +P+ I Y+II
Sbjct: 564 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 623

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G  +  R   +      M E G   +  TY +++ G+       EA+ L   L +M+
Sbjct: 624 IDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 682



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 29/473 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIE 123
           GC PDV   + L+K    + KS +A  ++ ++ + G    P+V AYN +I GF K   + 
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +   +  RG  PD+VTYN ++ +LC    ++ A     Q++     P   TY  LI
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                 GQ  +A+++  EM                        PDV++ +ML+ +L   G
Sbjct: 310 YGYSSTGQWKEAVRVFKEM------------------RRHSILPDVVTLSMLMGSLCKYG 351

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K +E   +   M  +G  P+V +Y+I+++     G   D  D+       G+ PD Y+++
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 411

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI AY   G LD A+   + M   G  PD+V Y T++AA C+ G  D A+E F ++ D 
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  +YN +     + G  ++A  +ISE+++ G+  D + ++S+I+ LC+ G V +A
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +     +    P  + Y++++ G+C   ++ +++ V  AM   G +PN   Y  L+ G
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591

Query: 484 IGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEIS 528
               G   E + L   ++         +++I  D   +  RT P    + E++
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 233/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + ++++   L++ F + +++++A+ ++  L +  E    P
Sbjct: 136 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL--LHRTPELGCVP 193

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SP+VV YN +I      G +  A  
Sbjct: 194 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 253

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY  ++ A                  +CK   + +A  F+R + +
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHA------------------LCKARAMDKAEAFLRQMVN 295

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P+  +YN L+    + G+W+E  ++  EM    + P+VVT S+L+ SLC+ GK ++
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY+ +++ Y   G L    +  D M+ DG  PD   +N ++ 
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  YN LI   C  G + +A  L+ ++ +      ++ ++ II   CK  R+ ++  + 
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 217/441 (49%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M  +   PDVV  + L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +++G+     +     + D +   G +PD  T+N++I +  + GM++ A  +F+++  
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 435

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TY  +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 495

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G   D++ ++ ++  L  +G+  + + +    ++ GL P+ V YS+L+ 
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + Y+ I+    + G    A   F ++++ G   ++ +YN +   L+ +     A+ + 
Sbjct: 616 STILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 675

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ + IT N++I  + +   V+EA  L   +  +R  P V++Y+I+I    K 
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+PN
Sbjct: 736 GLVEEAEDMFSSMQNAGCEPN 756



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 23/406 (5%)

Query: 122 IELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + L N+   R +  R  SP   TY I++         E A   F QLLR   +  +I   
Sbjct: 104 VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 163

Query: 181 ILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRSLES 222
            L++      +TD+A+ +L     E+G              +C +G  GQA   +R +  
Sbjct: 164 HLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 223

Query: 223 RG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            G  C P+V++YN ++      G   +   L  EM+ RG+ P++VTY+ ++ +LC+    
Sbjct: 224 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 283

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A   LR    K + P+ ++Y+ LI  Y   G+   A+     M     LPD+V  + +
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + + CK G   +A ++F+ ++  G  P+V SYN M +   + G  +    +   ML  GI
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD  T+N LI      GM+D+A+ +  +M     +P V++Y  +I   C+  ++++++E
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--MH 504
               M ++G  P++  Y  LI+G    G   +A EL + +++  MH
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 202/450 (44%), Gaps = 18/450 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK  E+    ++M   G  PDV     ++  +  +        + +++   G  PD + +
Sbjct: 351 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI  +     ++ A  + + +R  G  PDVVTY  +I +LC  G ++ A + F+Q++ 
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P    Y  LIQ     G   KA +L+ E+                  +CK G V  
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A        + G  PD + Y+ML+     +GK E+  ++   M+S G+EPNVV Y  L++
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G+ ++ + + R   ++G+ P    Y  +I    + GR   A      M   G   
Sbjct: 591 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAM 650

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DI  YN +L    KN   D+A+ +F++L  +    N+ + NTM   ++ +     A  + 
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + +    + P+ +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    K 
Sbjct: 711 ASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKK 770

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             I  +   L+ + E+       T +LL++
Sbjct: 771 NEIVRAGAYLSKIDERNFSLEHLTAMLLVD 800



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 195/429 (45%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KPDVV    +I    +  K + A+ +  +++
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AYN LI GFC    +  A +++  + + G   D+V ++ +I +LC  G + 
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y++L+    L G+ +KA+++ D M                
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM---------------- 573

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ RG++P+ + YSI+I  L + G
Sbjct: 574 --VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  D  +Y+ ++    K+   D AI     + +     +I+  N
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 691

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++    +    ++A ++F  +S     PNV +Y+ M + L   G    A  M S M + 
Sbjct: 692 TMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 751

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EP+    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 752 GCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 811

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 812 IRFLPAKYH 820



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 51/318 (16%)

Query: 244 KWEEGEKLMTEMISRG---LEPNVVTYSILI-----SSLCRDGKTEDAVDVLRAAKE--- 292
           + EE   L+ E+  RG   LE ++  +   +     S+ CR G         RAA     
Sbjct: 57  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 116

Query: 293 -KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + L+P +++Y  L+    +  R +LA+ F   ++  G   +I+  N +L  FC+    D
Sbjct: 117 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 176

Query: 352 QALEI--------------------FEKLSDVG------------------CPPNVSSYN 373
           +AL+I                     + L D G                  C PNV +YN
Sbjct: 177 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+    +  GD  +A  +  EM+ +GI PD +TYNS++  LC+   +D+A   L  M + 
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R  P   +YN +I G+  T +  E++ V   M      P+  T  +L+  +   G   EA
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356

Query: 494 MELANALVSMHAISRDTF 511
            ++ + + +M   + D F
Sbjct: 357 RDVFDTM-AMKGQNPDVF 373


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 58/490 (11%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P V+ C  LIKK    R+   A RV+E L+  G  D  ++N L++G+C+   +  A +VL
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAADAVSHNTLVAGYCRDGSLWDAERVL 176

Query: 130 DRLRSRG-------------------------------FSPDVVTYNIMIGSLCSRGMIE 158
           +  R+ G                                +PD  TYN ++  LC     E
Sbjct: 177 EAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPVAPDTYTYNTVLKGLCFAKQWE 236

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  +++R+NC P  +T+   I+A    G  D+A++LL++M                
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLV 296

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  + G V  A + + ++    C+P+ + YN  L+ L   G+W+E  +L+ EM+ +   
Sbjct: 297 NGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCP 353

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  T+S LI+SLC++   E A++VL   ++ G  PD  SY+ +IS + +    D A++ 
Sbjct: 354 PNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKL 413

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+   C PD +++N +L   C+      A E+  K+    C  N  ++N +  +L  
Sbjct: 414 LNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQ 470

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    A+ M   M      PD +TY+SLI+     G+   A  L   M     R  + S
Sbjct: 471 NGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPC---RADIFS 527

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN  + G C   R +++ E++A M  K C PNE T+ +LI  +   G    A+E+   + 
Sbjct: 528 YNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQM- 586

Query: 502 SMHAISRDTF 511
             + I+ D F
Sbjct: 587 PKYGITPDIF 596



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 180/348 (51%), Gaps = 30/348 (8%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFA 108
           AG++DE    I  MV   C P+    + LI    Q R +  A+ V+E ++KYG  PDV +
Sbjct: 334 AGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVS 393

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +IS F   ++   A+  L  L S    PD +++N ++  LC       A ++  ++L
Sbjct: 394 YNTIISCF---SEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKML 450

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           +++C    +T+ ILI +    GQ   A+++ + M                 G  ++G+  
Sbjct: 451 KEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDK 510

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            AF   RS+    C+ D+ SYN  L+ L    +W++  +L+ +M+++   PN VT++ILI
Sbjct: 511 VAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILI 567

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +SLC+ G    A++V     + G+TPD ++Y+ LI+ Y + G LD A++FL  M    C 
Sbjct: 568 NSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCE 624

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY---NTMF 376
           PD ++YN+IL   C+      A ++  ++    C PN  ++   N +F
Sbjct: 625 PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLF 672


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 19/426 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    +N +  GF KA ++E   +V   +   G++     Y I+I  LC  G  + A+K+
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----------------MCKK 207
              +     K   I Y+ +I       + ++A +L+++M                 +CK 
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
             +  A   V  + +RG +PD   YN +L  L    K EE   L  +M+ + + PNVVTY
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI+ LC+  + E A ++ +    KG  P   SY+ LI  +CK   L  A +  D M+ 
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             C+P++V Y T++    K+G    A E+ + +   G  PNV++Y+ +            
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 307

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  ++ +M+++GI P  +TYN L++ LCR   +++A  L   M   R  PTV++YN ++ 
Sbjct: 308 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLR 367

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
             C  ++++ +  + A M  KGC P+  TY  L  G+   G   EA EL   +  M    
Sbjct: 368 ALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL---MEKMKLTK 424

Query: 508 RDTFKR 513
           R+ F R
Sbjct: 425 RNPFGR 430



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 197/406 (48%), Gaps = 18/406 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            + ++ + +  LI    + G FDE+   + +M     K   +  + +I    +  +  +A
Sbjct: 40  GYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA 99

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             ++E + +Y  PD   Y  ++   CK  +I+ A   ++ + +RG  PD   YN ++  L
Sbjct: 100 RELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGL 159

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C    +E A  +F+++++    P V+TY  LI                   G+CK   + 
Sbjct: 160 CQEEKVEEARLLFEKMVKQRINPNVVTYNTLIN------------------GLCKAWRIE 201

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A++  + +  +G  P  +SYN L+            + +  +M+     PNVVTY+ LI
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             L + GK + A +VL    +KG+TP+  +Y  LI  +CK  R+D A + L+ M++ G  
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P +V YN +L + C+    + A ++F  ++   C P V +YNT+  AL        A  +
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            +EM++KG  PD ITY++L   L R G V EA  L+  M+ T+  P
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 1/229 (0%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  R + P   T++ +     + G+ E   +V +   E G T  A  Y  LIS  CK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            D A + L  M         + Y+TI+   CK    ++A E+ EK++    PP+  +Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  +     AL  + EM ++GI+PD   YN ++S LC++  V+EA  L   M   R
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             P V++YN +I G CK  RI  + E+   M  KG  P E +Y  LI+G
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++GK   +   ++ MV  G  P+V   + LI  F + R+ ++A +++E + 
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P V  YN L++  C+A+++E A K+   +  R   P VVTYN ++ +LC    ++
Sbjct: 317 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            A +++ +++   C P  ITY  L       G+  +A +L+++M + K+   G++ Q
Sbjct: 377 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRSSQ 433



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P    +NT+   F K G  +Q  E+++ + + G     S Y  + S L   G+   A  
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT-VISYNIIILGF 449
           ++  M  K  +   I Y+++I+ LC+   V+EA  L+  M   R+ P   ++Y  I+   
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM--ARYAPPDALTYGPIVERL 124

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           CKT+RI++++  +  M  +G KP+   Y  ++ G+
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGL 159


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 246/536 (45%), Gaps = 38/536 (7%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP-DVVMCTKL 78
           +SA  RP+T           + K ++    AG   E++  +  M  +G  P +      +
Sbjct: 156 ASAGARPDTF---------AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 206

Query: 79  IKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I   ++  +   AV V  E+ E+   P+   YN +I G  K   +E   ++ D++   G 
Sbjct: 207 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 266

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            P+ +TYN+++  LC  G +     + D++      P   TY+IL       G +   + 
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L  +                  G+CK G V  A + ++SL + G  P  + YN L+    
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 386

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ E       +M SR ++P+ +TY+ LI+ LC+  +  +A D+L   ++ G+ P   
Sbjct: 387 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 446

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +++ LI AY + G+L+     L  M  +G  P++V+Y +I+ AFCKNG   +A+ I + +
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
                 PN   YN +  A    G   +A  ++ +M S GI P  +TYN LI  LC    +
Sbjct: 507 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 566

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  ++  + + R  P  +SYN +I   C    I++++++   M + G K    TY  L
Sbjct: 567 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 626

Query: 481 IEGIGYGGWRAEAME------LANALV---SMHAISRDTFKRLNRTFPLLDVYKEI 527
           I G+G G  R   ME      + N +V   ++H I  + + +        D+ KE+
Sbjct: 627 ISGLG-GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 18/486 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   +RAG+  +++   + M      P+ +    +I    +        R+ + +  +G
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN L+SG C+A ++   + +LD + S+   PD  TY+I+   L   G  ++  
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F + L++       T +IL+     +G+   A ++L  +                 G 
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G +  AF     ++SR  +PD I+YN L+  L    +    + L+ EM   G+ P V
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ LI +  R G+ E    VL   +E GL P+  SY  +++A+CK+G++  A+  LD 
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     LP+   YN I+ A+ ++G  DQA  + EK+   G  P++ +YN +   L +   
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 565

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I+ + +  + PD ++YN+LIS  C  G +D+A+ L   M     + TV +Y+ 
Sbjct: 566 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 625

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     R+NE   +   M +    P+   + +++E     G   +A +L   ++   
Sbjct: 626 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685

Query: 505 AISRDT 510
               DT
Sbjct: 686 NNHDDT 691



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEG 190
           L S G  PD   +N  + +  + G +  A  +  ++ RD    P   +Y ++I      G
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214

Query: 191 QTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           +   A+++ DEM                 G  K G +   F+    +   G +P+ I+YN
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +LL  L   G+  E   L+ EM S+ + P+  TYSIL   L R+G ++  + +     + 
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+T   Y+   L++  CKDG++ +A E L  +++ G +P  V YNT++  +C+ G  + A
Sbjct: 335 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 394

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
              F ++      P+  +YN + + L  +     A  ++ EM   G+ P   T+N+LI  
Sbjct: 395 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 454

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             R G +++   +L +M+    +P V+SY  I+  FCK  +I E++ +L  MF K   PN
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514

Query: 474 ETTYVLLIE 482
              Y  +I+
Sbjct: 515 AQVYNAIID 523



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 36/300 (12%)

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------- 261
           E+R   P + S N+LL  LL++G+  +  +    + S G                     
Sbjct: 121 EARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDL 180

Query: 262 -----------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
                            PN  +Y+++I+ + R G+  DAV+V     E+ + P+  +Y+ 
Sbjct: 181 GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNT 240

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I  + K G L+      D M+  G  P+ + YN +L+  C+ G   +   + ++++   
Sbjct: 241 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 300

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+  +Y+ +F  L  +GD    L +  + L  G+   + T + L++ LC+DG V  A 
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +L  + +    PT + YN +I G+C+T  +  +      M  +  KP+  TY  LI G+
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 223/459 (48%), Gaps = 22/459 (4%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N H  S       +  +I    +A  FD +    + M+ NG KP+      LI  +    
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIG 256

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K  + V+++E +   G +PD + Y +L++  C  +++   +  LD +   G SPD   +N
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEM---HSFLDLMVENGLSPDHHIFN 313

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           I   +    GMI+ A  +F+++ +    P V+ Y  LI A                  +C
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA------------------LC 355

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G V  A      + + G  P+++ +N L+  L  + KWE  E+L+ EM+ +G+ PN V
Sbjct: 356 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 415

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            ++ LI +LC  G+  +   ++   +  G+ PDA+SY PLIS YC  GR D A +  D M
Sbjct: 416 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S G  P  V YNT+L  +C     D A  +F ++   G  P V +YNT+   L+ +   
Sbjct: 476 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 535

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +   M++ G + D  TYN +++ LC+   VDEA  +   + S   +  +I++ I+
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I    K  R  +++++ AA+   G  PN  TY L+ E +
Sbjct: 596 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 222/477 (46%), Gaps = 27/477 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           R G+   S      ++  G + + ++  +L+K     ++  +A+ V+  L++  E    P
Sbjct: 110 RMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVL--LQRMPELGCTP 167

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           D  +Y+ L+ GFC  N+ E A ++L  +     R   P+VVTY  +I  LC   + + A 
Sbjct: 168 DTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAE 227

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM------------ 209
            VF Q++ +  KP   TY  LI   +  G+  + +++L++M    +G+            
Sbjct: 228 GVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS--ARGLKPDCYTYGSLLN 285

Query: 210 ----VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
               + +   F+  +   G  PD   +N+        G  ++   +  +M   GL PNVV
Sbjct: 286 YLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVV 345

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y  LI +LC+ G+ +DA         +G+TP+   ++ L+   C   + + A E +  M
Sbjct: 346 NYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM 405

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  P+ V +NT++   C  G   +   + + +  VG  P+  SY  + S    +G  
Sbjct: 406 LDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRT 465

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +   M+S G+ P E+TYN+L+   C    +D+A  L  +M      P V++YN I
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + G  +T+R +E+ E+   M   G K +  TY +++ G+       EA ++  +L S
Sbjct: 526 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS 582



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 204/456 (44%), Gaps = 19/456 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      GK+ E +  +E M A G KPD      L+       + +  + +M  +E   
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLM--VENGL 305

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD   +N   S + K   I+ A  + +++R  G SP+VV Y  +I +LC  G ++ A  
Sbjct: 306 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 365

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
            F+Q++ +   P ++ +  L+       + ++A +L+ EM                  +C
Sbjct: 366 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G V +  + +  +E  G +PD  SY  L+      G+ +E EK+   M+S GL P  V
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ L+   C   + +DA  + R    KG+TP   +Y+ ++    +  R   A E    M
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           I+ G   DI  YN IL   CK+   D+A ++F+ L   G   N+ ++  M  AL   G K
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A+ + + + + G+ P+ +TY  +   L  +G ++E   L   ME     P     N +
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +        I+ +   L+ + E+      +T  LLI
Sbjct: 666 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLI 701



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 189/401 (47%), Gaps = 19/401 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   Y+ LI   C+  +++ +      +   G+  + +  N ++  LC    +  A  V
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 164 FDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
             Q + +  C P  ++Y+IL++    E + ++A++LL  M                +   
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA---------------NDHG 200

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           R C P+V++Y  ++  L     ++  E +  +MI  G++PN  TY+ LI      GK ++
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE 260

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
            V +L     +GL PD Y+Y  L++  C    +     FLD M+ +G  PD   +N   +
Sbjct: 261 VVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFNIFFS 317

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+ K G  D+A++IF K+   G  PNV +Y  +  AL   G    A    ++M+++G+ P
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 377

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + + +NSL+  LC     + A  L+ +M      P  + +N +I   C   R+ E   ++
Sbjct: 378 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 437

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             M   G +P+  +Y  LI G    G   EA ++ + +VS+
Sbjct: 438 DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI 478



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 18/387 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKYGEPDVF 107
           + G  D+++     M  +G  P+VV    LI    +  R  +  V+  +++ +   P++ 
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N+L+ G C  ++ E A +++  +  +G  P+ V +N +I +LC+ G +    ++ D +
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P   +YT LI    L G+TD+A K+ D M                 G C    +
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A+   R +  +G  P V++YN +L  L    ++ E ++L   MI+ G + ++ TY+I+
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+    ++A  + ++   KGL  +  ++  +I A  K GR + A++    + ++G 
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P++V Y  +     + G+ ++   +F  +   G  PN    N +   L   GD  RA  
Sbjct: 621 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA 680

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRD 417
            +S++  +    +  T + LIS    D
Sbjct: 681 YLSKLDERNFSVEASTTSLLISIFTSD 707



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 40/364 (10%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A K+FD+LL      +V+ +  ++ A     +              +  +V   F  
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTS----ESELVVSLFNR 85

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +    S    P+  +Y++L+  L  MG+ +        ++  G   N +  + L+  LC 
Sbjct: 86  MVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCD 145

Query: 277 DGKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLP 332
             +  +A+DV L+   E G TPD  SY  L+  +C + R + A+E L  M +D    C P
Sbjct: 146 GKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPP 205

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V Y T++   CK    D+A  +F+++ D G  PN  +YN +     S G     + M+
Sbjct: 206 NVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQML 265

Query: 393 SEMLSKGIEPDEITYNSLISCLC--------------------------------RDGMV 420
            +M ++G++PD  TY SL++ LC                                + GM+
Sbjct: 266 EKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 325

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           D+A+ +   M      P V++Y  +I   CK  R++++      M  +G  PN   +  L
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 385

Query: 481 IEGI 484
           + G+
Sbjct: 386 VYGL 389



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 17/185 (9%)

Query: 340 ILAAFCKNGNA--DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR---------- 387
           I+AA  ++G+   D AL++F++L     P +V ++N + +A+  +               
Sbjct: 18  IIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESE 77

Query: 388 -ALGMISEML---SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
             + + + M+   S  + P+  TY+ LI CLCR G +  +      +  T +R   I  N
Sbjct: 78  LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137

Query: 444 IIILGFCKTRRINESIEVLAA-MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            ++ G C  +R+ E+++VL   M E GC P+  +Y +L++G        EA+EL   + +
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 503 MHAIS 507
            H  S
Sbjct: 198 DHGRS 202


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 220/452 (48%), Gaps = 25/452 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   ++   I  +  +G KPD    T +I  + + R  + A  +   +++ G EP+   Y
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + LI+G C + ++  A   +  +   G  P V T+   I +LC  G IE A+K+F  + +
Sbjct: 302 STLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK 361

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF-------VRSLE- 221
             CKP V TYT LI      GQ    M +     M + G+V     +       + ++E 
Sbjct: 362 KGCKPNVYTYTSLIS-----GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 222 -----------SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                        GC P+  SYN L+R    +G  E+   ++T M+     P +VTY+I+
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C  G T+ A+ VL   K  G  PD +SY  LIS +CK  +++LA    + M+  G 
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V Y  +++ +CK+   D A  + E++   GC PNV +YN +   L    +   A  
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   ML + I PD +TY+++I+ LC +G +  A+ +   M      P + +Y+ +I    
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALG 656

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +  R+ E+ E+ + + ++G  P+E TYV +IE
Sbjct: 657 QEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 235/482 (48%), Gaps = 27/482 (5%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM----E 96
           + +IK      +  ++L +++     G K  +   T L+    Q  K N    VM    +
Sbjct: 162 IHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLL---IQLNKLNMTSTVMDRYHQ 218

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +  +P++  YN++I+  CK   +  A  +++++   G  PD  TY  MI   C    
Sbjct: 219 ILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++SAF++F+++  + C+P   TY+ LI      G+ ++A+  + EM              
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C  G +  A++    ++ +GC+P+V +Y  L+ +   + +   G  L   M   G
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI-SGQRVSRMAIG--LFHRMSRDG 395

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN VTY+ L++ L  + + + A+ V     + G  P+  SY+ LI  YC  G  + A+
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M+     P +V YN I+  +C +G+ D A+ + E +   GC P+  SY  + S  
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                   A GM +EM+ +G+ P+E+TY +LIS  C+D  +D A  +L  M+ +  RP V
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            +YN++I G  K    + + E+   M E+   P+  TY  +I G+   G    A+E+ N 
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635

Query: 500 LV 501
           +V
Sbjct: 636 MV 637



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 205/428 (47%), Gaps = 21/428 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     +G+ +E+L FI  M  +G  P V   T  I       +   A ++   ++
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMK 360

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P+V+ Y +LISG        +A  +  R+   G  P+ VTYN ++  L     I+
Sbjct: 361 KKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEID 417

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           SA  VF+ + +  C P   +Y  LI+     G T+KAM +L  M                
Sbjct: 418 SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIII 477

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C  G    A + +  +++ GCQPD  SY  L+     + K E    +  EM+ RGL 
Sbjct: 478 KGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLC 537

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN VTY+ LIS  C+D K + A  +L   K  G  P+  +Y+ LI    K      A E 
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 597

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+ +   PD+V Y+T++   C NG    ALE+F K+   GC PN+ +Y+++  AL  
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  M SE+  +G+ PDE+TY  +I      G VD A   L +M +   +PT+ +
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQT 717

Query: 442 YNIIILGF 449
           Y+++I G 
Sbjct: 718 YDVLIKGL 725



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 224/486 (46%), Gaps = 41/486 (8%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + + +LI+     G  ++++  + +M+     P +V    +IK +     ++ A+RV+E+
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G +PD ++Y  LISGFCK +++ELA+ + + +  RG  P+ VTY  +I   C    
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A ++ +++ R  C+P V TY +LI                   G+ K+     A + 
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIH------------------GLTKQNNFSGAEEL 597

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +      PDV++Y+ ++  L N G      ++  +M+  G  PN+ TYS LI +L +
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+ E+A ++    K++GL PD  +Y  +I      G++D A +FL  MI+ GC P +  
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQT 717

Query: 337 YNTILAAFCKNG----------------------NADQALEIFEKLSDVGCPPNVSSYNT 374
           Y+ ++                             N D    +  KL+++    +   Y+ 
Sbjct: 718 YDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDA 777

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + S L  SG    A  +   M+S+   P++ TY   +  L R   VD A+ +   M   R
Sbjct: 778 LLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQR 837

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
               +  Y  +I   C+  R  E+  V   M  +    +E  + +LI G+   G++   M
Sbjct: 838 CELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCM 897

Query: 495 ELANAL 500
           E  + +
Sbjct: 898 EFLHIM 903



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/265 (18%), Positives = 103/265 (38%), Gaps = 30/265 (11%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  ++K+I+    +GK D +  F+  M+  GC+P +     LIK    E   +K V +  
Sbjct: 680 EVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVAL-- 737

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                  P+  + +         + I + +  L  L    F      Y+ ++  L   G 
Sbjct: 738 -------PNAASTSTFDDQIINKDVISVLSSKLAEL---DFELSRQLYDALLSRLSRSGR 787

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              A  ++  ++  +  P   TY   + + +   + D AM +   M              
Sbjct: 788 WFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS------------- 834

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                 + C+  +  Y  L+ TL  + + +E   +  +M+SR L  + + ++ILI+ L  
Sbjct: 835 -----DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLG 889

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYS 301
            G  +  ++ L   +     P +++
Sbjct: 890 AGYKDLCMEFLHIMETNRRNPSSHA 914


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 238/467 (50%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   ++  +  M   G +PD+ +C   I       + +KAVR +E ++    EP+V 
Sbjct: 181 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 240

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C  +++E A +++  +  +G SPD ++Y  ++G LC    I+    + +++
Sbjct: 241 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM 300

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG-------MCKKGM 209
           L+D N  P  +TY   +      G  D+A++ L          D++G        C++G 
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + S+GC PDV++Y  ++  L    K ++ +K++ +M   G +PN V+Y+ 
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC++G + +A +++  ++E    P+A +Y  L+  + ++G+   A + +  MI  G
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C+    D+A    E+  + GC  NV ++ T+        D   AL
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +TY ++I  L + G ++EA  L + M      PT ++Y  +I  +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 600

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+ + +++L  M  +  +   T Y  +IE +   G   +A +L
Sbjct: 601 CRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKL 645



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 22/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + ++++  I  M   GC PD +    ++    +E++  +   +ME + K  
Sbjct: 245 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDS 304

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              PD   YN  +    K    + A + L     R F  D V Y+ ++ S C  G ++ A
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 364

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ +++    C P V+TYT +I                   G+C++  V QA + +R +
Sbjct: 365 KEIVNEMFSKGCIPDVVTYTSVIN------------------GLCQERKVDQAKKMLRQM 406

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC+P+ +SY  LL  L   G   E  ++M         PN +TYS+L+    R+GK+
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A D++R   +KG  P     + LI + C++ ++D A  F++  +++GC  ++VN+ T+
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  FC+  + + AL + + +      P+V +Y T+  AL   G    A  +  +ML  G+
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 586

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P  +TY ++I   CR G V++ + LL  M S +   T  +YN +I   C    + ++ +
Sbjct: 587 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYK 644

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  +     K +  T  +LIE
Sbjct: 645 LLGKVLRTASKIDANTCHMLIE 666



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 199/421 (47%), Gaps = 18/421 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A+RV+ +++K G EPD+   N  I      N+++ A + L+R++     P+V+TYN
Sbjct: 184 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 243

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    +E A ++  ++    C P  I+Y  ++     E +  +   L+++M   
Sbjct: 244 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM--- 300

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         L+     PD ++YN  +  L   G  +E  + + E   R    + V
Sbjct: 301 --------------LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS ++ S CR+G+ + A +++     KG  PD  +Y  +I+  C++ ++D A + L  M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   CKNGN+ +A E+     +    PN  +Y+ +       G  
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM+ KG  P  +  N LI  LC++  VDEA   +    +      V+++  +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I GFC+   +  ++ +L  M+     P+  TY  +I+ +G  G   EA +LA  ++ +  
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 586

Query: 506 I 506
           I
Sbjct: 587 I 587



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 191/398 (47%), Gaps = 24/398 (6%)

Query: 91  AVRVMEILEKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           A RV+ ++ K      P+ F Y  ++  + +A ++  A +VL  ++  G  PD+   N  
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTA 210

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I  L     ++ A +  +++     +P VITY  LI+                  G C  
Sbjct: 211 IHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIK------------------GYCDL 252

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVT 266
             +  A + +  +  +GC PD ISY  ++  L    + +E   LM +M+    L P+ VT
Sbjct: 253 HRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+  +  L + G  ++A++ LR A+E+    D   Y  ++ ++C++GR+D A E ++ M 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC+PD+V Y +++   C+    DQA ++  ++   GC PN  SY  + + L  +G+ +
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  M++        P+ ITY+ L+    R+G   EA  L+ +M    F PT +  N++I
Sbjct: 433 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              C+  +++E+   +      GC  N   +  +I G 
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 200/431 (46%), Gaps = 26/431 (6%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           +++LL   V    F+ ++ +    G  DE+L F+        + D V  + ++  F +E 
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKH---GHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 359

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           + +KA  ++ E+  K   PDV  Y ++I+G C+  +++ A K+L ++   G  P+ V+Y 
Sbjct: 360 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 419

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            ++  LC  G    A ++ +    D   P  ITY++L+     EG++ +A  L+ EM   
Sbjct: 420 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                          +C++  V +A +F+    + GC  +V+++  ++         E  
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L+ +M      P+VVTY+ +I +L + G+ E+A  +       GL P   +Y  +I  
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQ 599

Query: 309 YCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           YC+ GR++  ++ L+ M+S   C      YN ++   C  GN +QA ++  K+       
Sbjct: 600 YCRMGRVEDLLKLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           + ++ + +  +  S G  + +  +   M ++ + PD      +   L  +G  +EA  L+
Sbjct: 657 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 716

Query: 428 VD-MESTRFRP 437
           +  +E  R  P
Sbjct: 717 LRFVERGRISP 727



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 6/304 (1%)

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           +++L +  +C+           R +E R   P+   Y M+  +    GK     +++T M
Sbjct: 141 LEILSKTKLCQGAKRVLRLMAKRRIERR---PEAFGYVMV--SYSRAGKLRNAMRVLTMM 195

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+EP++   +  I  L    + + AV  L   +   + P+  +Y+ LI  YC   RL
Sbjct: 196 QKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRL 255

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVSSYNT 374
           + A+E +  M   GC PD ++Y T++   CK     +   + EK L D    P+  +YNT
Sbjct: 256 EDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNT 315

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
               L   G    AL  + E   +    D++ Y++++   CR+G +D+A  ++ +M S  
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V++Y  +I G C+ R+++++ ++L  M++ GCKPN  +Y  L+ G+   G   EA 
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435

Query: 495 ELAN 498
           E+ N
Sbjct: 436 EMMN 439



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 3/261 (1%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           + D I Y  +L  L      +  ++++  M  R +E     +  ++ S  R GK  +A+ 
Sbjct: 131 RHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL   ++ G+ PD    +  I       RLD A+ FL+ M      P+++ YN ++  +C
Sbjct: 191 VLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYC 250

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK--GIEPD 403
                + A+E+  ++   GC P+  SY T+   L     +I+ + ++ E + K   + PD
Sbjct: 251 DLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKE-KRIKEVRLLMEKMLKDSNLLPD 309

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           ++TYN+ +  L + G  DEA+  L + E  RFR   + Y+ I+  FC+  R++++ E++ 
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
            MF KGC P+  TY  +I G+
Sbjct: 370 EMFSKGCIPDVVTYTSVINGL 390


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 238/467 (50%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   ++  +  M   G +PD+ +C   I       + +KAVR +E ++    EP+V 
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 303

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C  +++E A +++  +  +G SPD ++Y  ++G LC    I+    + +++
Sbjct: 304 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM 363

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG-------MCKKGM 209
           L+D N  P  +TY   +      G  D+A++ L          D++G        C++G 
Sbjct: 364 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 423

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + S+GC PDV++Y  ++  L    K ++ +K++ +M   G +PN V+Y+ 
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC++G + +A +++  ++E    P+A +Y  L+  + ++G+   A + +  MI  G
Sbjct: 484 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 543

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C+    D+A    E+  + GC  NV ++ T+        D   AL
Sbjct: 544 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 603

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +TY ++I  L + G ++EA  L + M      PT ++Y  +I  +
Sbjct: 604 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 663

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+ + +++L  M  +  +   T Y  +IE +   G   +A +L
Sbjct: 664 CRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKL 708



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 22/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + ++++  I  M   GC PD +    ++    +E++  +   +ME + K  
Sbjct: 308 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDS 367

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              PD   YN  +    K    + A + L     R F  D V Y+ ++ S C  G ++ A
Sbjct: 368 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 427

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ +++    C P V+TYT +I                   G+C++  V QA + +R +
Sbjct: 428 KEIVNEMFSKGCIPDVVTYTSVIN------------------GLCQERKVDQAKKMLRQM 469

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC+P+ +SY  LL  L   G   E  ++M         PN +TYS+L+    R+GK+
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A D++R   +KG  P     + LI + C++ ++D A  F++  +++GC  ++VN+ T+
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  FC+  + + AL + + +      P+V +Y T+  AL   G    A  +  +ML  G+
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P  +TY ++I   CR G V++ + LL  M S +   T  +YN +I   C    + ++ +
Sbjct: 650 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYK 707

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  +     K +  T  +LIE
Sbjct: 708 LLGKVLRTASKIDANTCHMLIE 729



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 199/421 (47%), Gaps = 18/421 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A+RV+ +++K G EPD+   N  I      N+++ A + L+R++     P+V+TYN
Sbjct: 247 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 306

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    +E A ++  ++    C P  I+Y  ++     E +  +   L+++M   
Sbjct: 307 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM--- 363

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         L+     PD ++YN  +  L   G  +E  + + E   R    + V
Sbjct: 364 --------------LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS ++ S CR+G+ + A +++     KG  PD  +Y  +I+  C++ ++D A + L  M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   CKNGN+ +A E+     +    PN  +Y+ +       G  
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM+ KG  P  +  N LI  LC++  VDEA   +    +      V+++  +
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I GFC+   +  ++ +L  M+     P+  TY  +I+ +G  G   EA +LA  ++ +  
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649

Query: 506 I 506
           I
Sbjct: 650 I 650



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 186/382 (48%), Gaps = 21/382 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y  ++  + +A ++  A +VL  ++  G  PD+   N  I  L     ++ A + 
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            +++     +P VITY  LI+      + + AM+L+ EM                    +
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF------------------K 331

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTED 282
           GC PD ISY  ++  L    + +E   LM +M+    L P+ VTY+  +  L + G  ++
Sbjct: 332 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 391

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++ LR A+E+    D   Y  ++ ++C++GR+D A E ++ M S GC+PD+V Y +++ 
Sbjct: 392 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 451

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C+    DQA ++  ++   GC PN  SY  + + L  +G+ + A  M++        P
Sbjct: 452 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIP 511

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + ITY+ L+    R+G   EA  L+ +M    F PT +  N++I   C+  +++E+   +
Sbjct: 512 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 571

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
                 GC  N   +  +I G 
Sbjct: 572 EQCLNNGCAVNVVNFTTVIHGF 593



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 200/431 (46%), Gaps = 26/431 (6%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           +++LL   V    F+ ++ +    G  DE+L F+        + D V  + ++  F +E 
Sbjct: 366 DSNLLPDQVTYNTFVHMLSKH---GHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 422

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           + +KA  ++ E+  K   PDV  Y ++I+G C+  +++ A K+L ++   G  P+ V+Y 
Sbjct: 423 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 482

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            ++  LC  G    A ++ +    D   P  ITY++L+     EG++ +A  L+ EM   
Sbjct: 483 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                          +C++  V +A +F+    + GC  +V+++  ++         E  
Sbjct: 543 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 602

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L+ +M      P+VVTY+ +I +L + G+ E+A  +       GL P   +Y  +I  
Sbjct: 603 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQ 662

Query: 309 YCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           YC+ GR++  ++ L+ M+S   C      YN ++   C  GN +QA ++  K+       
Sbjct: 663 YCRMGRVEDLLKLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 719

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           + ++ + +  +  S G  + +  +   M ++ + PD      +   L  +G  +EA  L+
Sbjct: 720 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 779

Query: 428 VD-MESTRFRP 437
           +  +E  R  P
Sbjct: 780 LRFVERGRISP 790


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 234/495 (47%), Gaps = 35/495 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPN +          F   I+   RAGK DE+      M   GC PD+V  T LI     
Sbjct: 259 RPNVY---------TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCN 309

Query: 85  ERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             +   A  +   ++  G  PD   Y  L+  F     ++   +   ++ + G+ PDVVT
Sbjct: 310 AGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVT 369

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           + I++  LC     + AF  FD + +    P + TY  LI   +  G+ + A+KLLD M 
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM- 428

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
                            ES G QP   +Y   +      G+  +  +   +M ++G+ PN
Sbjct: 429 -----------------ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +V  +  + SL   G+  +A  +    +E GL PD+ +Y+ ++  Y K G++D A+  L 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            MI +GC PD++  N+++ +  K G  D+A ++F+++ D+   P V +YNT+ S L   G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A+ +   M+ K   P+ I++N+L+ C C++  V+ A+ +   M     +P V++YN
Sbjct: 592 RVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +I G  K  ++N +      + +K   P+  T   L+ G+   G   +A+ +A     M
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDF--M 708

Query: 504 HAISRDTFKRLNRTF 518
           + +      R+NR+F
Sbjct: 709 YQVRF----RVNRSF 719



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 222/452 (49%), Gaps = 19/452 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F +    +  LI    ++G   E+L     MV+ G KP +   + L+    ++R S   
Sbjct: 187 GFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV 246

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + +++ +E  G  P+V+ +   I    +A +I+ A ++  R+   G  PD+VTY ++I +
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC+ G +E+A ++F ++  +  KP  + Y  L+      G  D                 
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK-------------- 352

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               +F   +E+ G  PDV+++ +L+  L     ++E       M  +G+ PN+ TY+ L
Sbjct: 353 ----EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  L R G+ EDA+ +L   +  G+ P AY+Y   I  + K G    A+E  + M + G 
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+IV  N  L +  + G   +A  +F  L + G  P+  +YN M       G    A+ 
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++SEM+  G EPD I  NSLI  L + G VDEA  +   M+  +  PTV++YN ++ G  
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K  R+ ++IE+  +M  K C PN  ++  L++
Sbjct: 589 KEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 241/524 (45%), Gaps = 57/524 (10%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
            LI   ++AG+ DE+    + M      P VV    L+    +E +  KA+ + E ++ K 
Sbjct: 548  LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607

Query: 102  GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              P+  ++N L+  FCK +++ELA K+  ++      PDV+TYN +I  L     +  AF
Sbjct: 608  CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 162  KVFDQLLRDNCKPTVIT------------------------------------YTILIQA 185
              F QL + +  P  +T                                    +  L+  
Sbjct: 668  WFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726

Query: 186  TMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQ-FVRSLESRGCQP 227
            T++E + DKA+   +E+ +                 CK      A+Q F +  +  G  P
Sbjct: 727  TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             + SYN L+  LL +   E+   L  +M + G  P+  T+++L++   + GK  +  ++ 
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            +    +   PDA +Y+ +IS+  K   LD A++F   ++S    P    Y  ++    K 
Sbjct: 847  KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            G  ++A+ +FE++SD GC PN + +N + +     GD   A  +   M+++GI PD  +Y
Sbjct: 907  GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966

Query: 408  NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
              L+ CLC  G VDEA+    +++ST   P  I+YN II G  K++R+ E++ +   M  
Sbjct: 967  TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRN 1026

Query: 468  KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            +G  P+  TY  L+  +G  G   +A  +   L  +  +  D F
Sbjct: 1027 RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL-QLAGLEPDVF 1069



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 243/568 (42%), Gaps = 97/568 (17%)

Query: 32  SFDVKETQ--------FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +FDV   Q        +  LI    RAG+ +++L  +++M + G +P        I  F 
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFG 448

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +  ++ KAV   E ++  G  P++ A NA +    +  ++  A  + + LR  G +PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN+M+      G ++ A  +  +++R+ C+P VI    LI +    G+ D+A ++ D M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ K+G V +A +   S+  + C P+ IS+N LL       + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 246 EEGEKLMTEM----------------------------------ISRGLEPNVVTYSILI 271
           E   K+ ++M                                  + + + P+ VT   L+
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 272 SSLCRDGKTEDAVDVLRA---------------------------------AKE---KGL 295
             L + G+  DA+ + R                                  A+E    G+
Sbjct: 689 PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQAL 354
             +     PL+   CK  R   A +  D      G  P + +YN ++    +    ++A 
Sbjct: 749 CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++F+ + +VGC P+  ++N + +    SG       +  EM+S+  +PD ITYN +IS L
Sbjct: 809 DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            +   +D+A+    D+ S+ FRPT  +Y  +I G  K  R+ E++ +   M + GCKPN 
Sbjct: 869 AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             + +LI G G  G    A +L   +V+
Sbjct: 929 AIFNILINGYGKIGDTETACQLFKRMVN 956



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 203/426 (47%), Gaps = 52/426 (12%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL+++R  GF  +  +YN +I  L   G    A +V+ +++ +  KP++ TY+ L+ A  
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 188 LEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVI 230
            +  ++  M LL EM                  + + G + +A++  R ++  GC PD++
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLE----------------------------- 261
           +Y +L+  L N G+ E  ++L  +M + G +                             
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                 P+VVT++IL+  LC+    ++A       +++G+ P+ ++Y+ LI    + GR+
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + A++ LD M S G  P    Y T +  F K+G   +A+E FEK+   G  PN+ + N  
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
             +L   G    A  M + +   G+ PD +TYN ++ C  + G VDEAV LL +M     
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P VI  N +I    K  R++E+ ++   M +    P   TY  L+ G+G  G   +A+E
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 496 LANALV 501
           L  +++
Sbjct: 599 LFESMI 604



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 175/370 (47%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+   CK  +   A ++ D+   + G SP + +YN +IG L      E A+ +F  +   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P   T+ +L+    + G               K G + + F+  + + SR C+PD I
Sbjct: 818  GCAPDAFTFNMLLA---VHG---------------KSGKITELFELYKEMISRRCKPDAI 859

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            +YN+++ +L      ++      +++S    P   TY  LI  L + G+ E+A+ +    
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             + G  P+   ++ LI+ Y K G  + A +    M+++G  PD+ +Y  ++   C  G  
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D+AL  F +L   G  P+  +YN + + L  S     AL + +EM ++GI PD  TYNSL
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            +  L   GMV++A  +  +++     P V +YN +I G+  +     +  V   M   GC
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 471  KPNETTYVLL 480
             PN  TY  L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 222/485 (45%), Gaps = 43/485 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ DE++  +  M+ NGC+PDV++   LI   ++  + ++A ++ + ++     P V 
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+SG  K  +++ A ++ + +  +  SP+ +++N ++   C    +E A K+F ++
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
              +CKP V+TY  +I   + E + + A     ++                G+ K G +G
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIG 698

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE--GEKLMT-----------EMISR 258
            A    R    +            +R  +N   WE+  G  L+            E++  
Sbjct: 699 DAISIARDFMYQ------------VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           G+         L+  LC+  +   A  +  +  K+ G++P   SY+ LI    +    + 
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A +    M + GC PD   +N +LA   K+G   +  E+++++    C P+  +YN + S
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +L  S +  +AL    +++S    P   TY  LI  L + G ++EA+ L  +M     +P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
               +NI+I G+ K      + ++   M  +G +P+  +Y +L++ +   G   EA+   
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 498 NALVS 502
           N L S
Sbjct: 987 NELKS 991



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 23/351 (6%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N M+  L     +E    VF+ + +   +  + TY  + +A  + G   +   +L++M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 203 G-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             + + G  G+A +  R + S G +P + +Y+ L+  L   GK 
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL---GKK 240

Query: 246 EEGEKLMT---EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
            + E +M    EM   GL PNV T++I I  L R GK ++A ++ R   ++G  PD  +Y
Sbjct: 241 RDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             LI A C  G+L+ A E    M ++G  PD V Y T+L  F   G+ D   E + ++  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  P+V ++  +   L  + D   A      M  +GI P+  TYN+LI  L R G +++
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           A+ LL  MES   +PT  +Y   I  F K+    +++E    M  KG  PN
Sbjct: 421 ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 19/299 (6%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
            F  L+    ++GK  E     + M++  CKPD +    +I    +    +KA+    +++
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                 P    Y  LI G  K  ++E A ++ + +   G  P+   +NI+I      G  E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            +A ++F +++ +  +P + +YTIL+    L G+ D+A+   +E                 
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE----------------- 988

Query: 219  SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             L+S G  PD I+YN ++  L    + EE   L  EM +RG+ P++ TY+ L+ +L   G
Sbjct: 989  -LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047

Query: 279  KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E A  +    +  GL PD ++Y+ LI  Y      + A      M+ DGC P+I  Y
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 140/294 (47%), Gaps = 3/294 (1%)

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +   F+F   ++ +  + D+ +Y  + + L   G   +   ++ +M   G   N  +Y+ 
Sbjct: 141 MAAVFEF---MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  L + G   +A++V R    +GL P   +Y  L+ A  K    ++ +  L  M   G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P++  +   +    + G  D+A EIF ++ D GC P++ +Y  +  AL ++G    A 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  +M + G +PD++ Y +L+      G +D        ME+  + P V+++ I++   
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           CK R  +E+      M ++G  PN  TY  LI G+   G   +A++L + + S+
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 95/204 (46%)

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ED   V    ++K +  D  +Y  +  A    G L      L+ M   G + +  +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++    ++G   +ALE++ ++   G  P++ +Y+ +  AL    D    + ++ EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ P+  T+   I  L R G +DEA  +   M+     P +++Y ++I   C   ++  +
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 459 IEVLAAMFEKGCKPNETTYVLLIE 482
            E+   M   G KP++  Y+ L++
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLD 340



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  LI    + G  + +    + MV  G +PD+   T L+       + ++A+     L+
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
              G +PD  AYN +I+G  K+ ++E A  + + +R+RG  PD+ TYN ++ +L   GM+E
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
             A +++++L     +P V TY  LI+   L    +                   A+   +
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE------------------HAYTVYK 1092

Query: 219  SLESRGCQPDVISYNML 235
            ++   GC P++ +Y  L
Sbjct: 1093 NMMVDGCNPNIGTYAQL 1109



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 45/253 (17%)

Query: 319 IEFLDYMISDGCLPDIVNY----NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           I  L Y  S    P +++     N +L     +   +    +FE +       ++ +Y T
Sbjct: 103 IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLT 162

Query: 375 MFSALWSSG---------DKIRALGMI--------------------------SEMLSKG 399
           +F AL   G         +K+R  G +                            M+S+G
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++P   TY++L+  L +    +  + LL +ME    RP V ++ I I    +  +I+E+ 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALVSMHAISRDTFKRL 514
           E+   M ++GC P+  TY +LI+ +   G    A EL     AN       I      + 
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342

Query: 515 NRTFPLLDVYKEI 527
           N  F  LD +KE 
Sbjct: 343 N-DFGDLDTFKEF 354


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 231/454 (50%), Gaps = 22/454 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           D V+ ++L+K     ++ ++A  ++   + ++G  PDVF+Y+ L+ GFC   + E A ++
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALEL 186

Query: 129 LDRLRSRG---FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           L  +   G    +P+VVTY  +I  LC   M++ A  VF  ++    +P   TYT LI  
Sbjct: 187 LSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 186 TMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPD 228
            +  G+  + +++L EM                  +CK G   +A     S+  +G +P+
Sbjct: 247 YLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V  Y +LL      G   E    +  M+  G+ P+   ++I+  +  +    ++A+ +  
Sbjct: 307 VTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +++ L+P+  +Y  LI A CK GR+D A+   + MI +G  PDI  +++++   C   
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A E+F ++ D G   +   +NT+   L   G  + A  +I  ML  G+ PD I+YN
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYN 486

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +L+   C  G +DEA  LL  + S   +P  ++YN ++ G+CK RRI+++  +   M  K
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  P+  TY  ++ G+   G  +EA EL  ++++
Sbjct: 547 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 230/477 (48%), Gaps = 28/477 (5%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPN H          +  LI      GK+ E +  ++ M  +G +PD  +   L+    +
Sbjct: 234 RPNNH---------TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCK 284

Query: 85  ERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             +  +A  + + ++ K  +P+V  Y  L+ G+     +   +  LD +   G SPD   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           +NIM  +   + MI+ A  +FD++ +    P ++TY  LI A                  
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA------------------ 386

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G V  A      +   G  PD+  ++ L+  L  + KWE+ E+L  E++ +G+  +
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            V ++ L+ +LCR+G+  +A  ++      G+ PD  SY+ L+  +C  GR+D A + LD
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            ++S G  PD V YNT+L  +CK    D A  +F ++   G  P+V +YNT+   L+ +G
Sbjct: 507 VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 566

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +   M++   + +  TYN +I+ LC++  VDEA  +   + S   +  + + N
Sbjct: 567 RFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTAN 626

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I+I    K  R  +++++ A +   G  P+  TY L+ E +   G   E  EL +A+
Sbjct: 627 IMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 236/514 (45%), Gaps = 57/514 (11%)

Query: 40  FMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F +L+K    A + DE+    +  M   GC PDV   + L+K F  E+++ +A+ ++ ++
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190

Query: 99  EKYGE----PDVFAYNALISGFCKANQIELANKV-------------------------- 128
              G+    P+V  Y  +I G CKA  ++ A  V                          
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSI 250

Query: 129 ---------LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
                    L  + + G  PD   Y +++  LC  G    A  +FD ++R   KP V  Y
Sbjct: 251 GKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIY 310

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
            IL+     EG   +    LD M                    KK M+ +A      +  
Sbjct: 311 GILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQ 370

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P++++Y  L+  L  +G+ ++      +MI  G+ P++  +S L+  LC   K E 
Sbjct: 371 QRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEK 430

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A ++     ++G+  D   ++ L+   C++GR+  A   +D M+  G  PD+++YNT++ 
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C  G  D+A ++ + +  +G  P+  +YNT+      +     A  +  EML KG+ P
Sbjct: 491 GHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +TYN+++  L + G   EA  L + M ++R +  + +YNIII G CK   ++E+ ++ 
Sbjct: 551 DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMF 610

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++  K  + +  T  ++I  +  GG + +AM+L
Sbjct: 611 HSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 220/470 (46%), Gaps = 22/470 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +S++  G KP+V +   L+  +  E   ++    ++++   G  PD  
Sbjct: 284 KNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHH 343

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N +   + K   I+ A  + D++R +  SP++VTY  +I +LC  G ++ A   F+Q+
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P +  ++ L+       + +KA +L  E+                  +C++G V
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +   G +PDVISYN L+      G+ +E  KL+  ++S GL+P+ VTY+ L
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTL 523

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+  + +DA  + R    KGLTPD  +Y+ ++    + GR   A E    MI+   
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             +I  YN I+   CKN   D+A ++F  L       ++ + N M  AL   G K  A+ 
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ PD  TY  +   L ++G ++E   L   ME     P     N ++    
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               IN +   L+ + EK      +T  +LI        R E  +LA +L
Sbjct: 704 HRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYS----RGEYQQLAKSL 749


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 225/488 (46%), Gaps = 56/488 (11%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAV---RVMEILEKYGEPDVFAYNALISGFCKA 119
           +VA G +PD     K ++        ++A+   R M   E    PD F+YN +I+G  ++
Sbjct: 149 LVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRS 208

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            +   A KV D +  RG +P+ +TYN MI      G +E+ F++ DQ+L+D  KP V+TY
Sbjct: 209 GKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTY 268

Query: 180 TILIQATMLEGQTDKAMKLLDEM------------------------------------- 202
            +L+      G+ D+   L+DEM                                     
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK 328

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK G V +A Q +  L   G  P    YN L+     +   + 
Sbjct: 329 KGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQG 388

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              +  +M SR + P+ +TY+ LI+ LC+     +A D++   ++ G+ P   +++ LI 
Sbjct: 389 AFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLID 448

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           AY + G+L+     L  M   G   +++++ +++ AFCKNG   +A+ I + +      P
Sbjct: 449 AYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVP 508

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N   YN++  A   SG   +A  ++ +M S G+     TYN L+  LC++  +DEA  L+
Sbjct: 509 NAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            ++ +   RP V+SYN II   C     + ++E+L  M +   +P   TY  L+  +G  
Sbjct: 569 YNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628

Query: 488 GWRAEAME 495
           G R   ME
Sbjct: 629 G-RVHDME 635



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 232/480 (48%), Gaps = 25/480 (5%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R    +E  P     S++V       +I   +R+GK  ++L   + MV  G  P+ +  
Sbjct: 181 LRRMGRSEGAPPPDAFSYNV-------VIAGLWRSGKGSDALKVFDEMVDRGVAPNQITY 233

Query: 76  TKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
             +I    +        R+  ++L+   +P+V  YN L+SG C+A +++    ++D + S
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               PD  TY+I+   L   G   +   +F + L+        T +IL+     +G+  K
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A ++L+ +                 G C+   +  AF     ++SR  +PD I+YN L+ 
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L  M    E E L+ EM   G++P+V T++ LI +  R G+ E    VL   ++KG+  
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  S+  ++ A+CK+G++  A+  LD MI    +P+   YN+I+ A+ ++G  +QA  + 
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           EK+   G   ++ +YN +   L  +     A  +I  + ++G+ PD ++YN++IS  C  
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D A+ LL +M     RPT+ +Y+ ++       R+++   +   M  K  +P+ + Y
Sbjct: 594 GDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 201/436 (46%), Gaps = 21/436 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P +  C  L++      +         +L   G  PD FA+N  +     A  ++ A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 129 LDRL-RSRGFSP-DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           L R+ RS G  P D  +YN++I  L   G    A KVFD+++     P  ITY  +I   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
           +  G  +   +L D+M                     G +P+V++YN+LL  L   G+ +
Sbjct: 241 VKGGDLEAGFRLRDQM------------------LQDGRKPNVVTYNVLLSGLCRAGRMD 282

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   LM EM S  + P+  TYSIL   L R G +   + +   + +KG+   AY+   L+
Sbjct: 283 ETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILL 342

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  CKDG++  A + L+ ++  G +P    YNT++  +C+  +   A  IFE++      
Sbjct: 343 NGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR 402

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+  +YN + + L        A  ++ EM   G++P   T+N+LI    R G +++   +
Sbjct: 403 PDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTV 462

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L DM+    +  VIS+  ++  FCK  +I E++ +L  M  K   PN   Y  +I+    
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522

Query: 487 GGWRAEAMELANALVS 502
            G   +A  L   + S
Sbjct: 523 SGGTEQAFLLVEKMKS 538



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 24/354 (6%)

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
           C+ L+    ++ K  KA +V+E+L   G  P    YN LI+G+C+   ++ A  + ++++
Sbjct: 338 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK 397

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           SR   PD +TYN +I  LC   MI  A  +  ++ +    P+V T+  LI A    GQ +
Sbjct: 398 SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           K   +L +M                   CK G + +A   +  +  +   P+   YN ++
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
              +  G  E+   L+ +M S G+  ++ TY++L+  LC++ + ++A +++     +GL 
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  SY+ +ISA C  G  D A+E L  M      P +  Y+ +L+A    G       +
Sbjct: 578 PDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECL 637

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++ +      P+ S Y T         ++ +   +  EM  KGI  D+    +L
Sbjct: 638 YQHMVHKNVEPSSSIYGTRCE------NESKVASLKKEMSEKGIAFDDTERTNL 685


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 196/401 (48%), Gaps = 20/401 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAYNALISGFCKANQ 121
           M   G  P VV    +I    Q  +   A V+ +E+     +PDV  YN+L++G+CKA  
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           ++ A  +   LR  G +P V+TYNI+I   C  G +E A ++ ++++   C P V TYTI
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L++ +        A +  DEM                   S+G QPD  +YN  +R  L 
Sbjct: 454 LMKGSHNACSLAMAREFFDEM------------------LSKGLQPDCFAYNTRIRAELT 495

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +G   +  +L   M+  G+  + VTY+ILI  LC+ G   DA D+       GL PD  +
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  LI A+C+ G L  A +F   MISDG  P  V Y   + A+C+ GN   A   F K+ 
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           + G  PN  +YN +  AL  +G    A     EML +G+ P++ TY  LI   C++G  +
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +A+    +M      P  +++  +  GF     +N +IE L
Sbjct: 676 DAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYL 715



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 201/455 (44%), Gaps = 20/455 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  +E+   +E M  +  K        LI     +    KA  +   +E  G  P V 
Sbjct: 286 RKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVV 344

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNA+I G  ++ Q+E A      +R+ G  PDV+TYN ++   C  G ++ A  +F  L
Sbjct: 345 TYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL 404

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 PTV+TY ILI                   G C+ G + +A +    +  +GC P
Sbjct: 405 RHAGLAPTVLTYNILID------------------GYCRLGDLEEARRLKEEMVEQGCLP 446

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV +Y +L++   N        +   EM+S+GL+P+   Y+  I +    G    A  + 
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLR 506

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G++ D  +Y+ LI   CK G L+ A +    M+ +G  PD + Y  ++ A C+ 
Sbjct: 507 EVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCER 566

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A + F+ +   G  P+  +Y     A    G+   A G   +ML +G+EP+EITY
Sbjct: 567 GLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 626

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI  LCR G    A     +M      P   +Y ++I G CK     +++     M +
Sbjct: 627 NVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQ 686

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G  P+  T+  L +G   G        L NA++ 
Sbjct: 687 NGIHPDYLTHKALFKGFDEGHMNHAIEYLENAVLG 721



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 28/462 (6%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +H ++ DVK+    ++++    A ++D+       M+  G +P +V    L+  F +E +
Sbjct: 195 SHGVAPDVKDCN--RVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252

Query: 88  SNKAVRVMEILEKYGE---PDVFAYNALISGFCKANQIELANKVLD--RLRSRGFSPDVV 142
           ++K   +++ +E  G    P+   +N +I+G  +   +E A ++++  RL  +  S    
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASS---F 309

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN +I  L ++G ++ A  +  ++  +   PTV+TY  +I   +  GQ + A     EM
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
                              + G QPDVI+YN LL      G  +E   L  ++   GL P
Sbjct: 370 ------------------RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAP 411

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
            V+TY+ILI   CR G  E+A  +     E+G  PD  +Y  L+        L +A EF 
Sbjct: 412 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFF 471

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+S G  PD   YNT + A    G   +A  + E +   G   +  +YN +   L  +
Sbjct: 472 DEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKT 531

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G+   A  +  +M+  G++PD ITY  LI   C  G++ EA     DM S    P+ ++Y
Sbjct: 532 GNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTY 591

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            + I  +C+   +  +      M E+G +PNE TY +LI  +
Sbjct: 592 TVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 184/394 (46%), Gaps = 20/394 (5%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
               + S G +PDV   N ++  L      +    V  ++L+   +P+++TY  L+ + +
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248

Query: 188 LEGQTDKAMKLLDEM-------------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
            EG+ DK   LL EM                   G+ +KG + +A + V  +     +  
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KAS 307

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +YN L+  LL  G  ++ + L  EM + G+ P VVTY+ +I  L + G+ E A     
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  GL PD  +Y+ L++ YCK G L  A+     +   G  P ++ YN ++  +C+ G
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + ++A  + E++ + GC P+V +Y  +     ++     A     EMLSKG++PD   YN
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           + I      G + +A  L   M         ++YNI+I G CKT  +N++ ++   M   
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G +P+  TY  LI      G   EA +    ++S
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMIS 581



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 36/216 (16%)

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           L +     M S G  PD+ + N +L         D    +  ++  +G  P++ +YNT+ 
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 377 SALWSSGDKIRALGMISEMLSKGIE--PDEITYNSLISCLCRDGMVDEAV---------- 424
            +    G   +   ++ EM ++G    P+++T+N +I+ L R G ++EA           
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 425 ------------GLL------------VDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
                       GLL            ++ME+    PTV++YN +I G  ++ ++  +  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
               M   G +P+  TY  L+ G    G   EA+ L
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L    EM S G+ PD    N ++  L      D+   +  +M      P++++YN ++  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 449 FCKTRRINESIEVLAAMFE---KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           F K  R N+ + +L    E    GC PN+ T+ ++I G+   G   EA E+   +
Sbjct: 247 FLKEGR-NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM 300


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 227/460 (49%), Gaps = 46/460 (10%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
           D +    + M   GCKP+      L++ + +   ++K + ++  +E +G  P+   YN +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +S FC+  + + + K+++++R  G  PD+VT+N  I +LC  G +  A ++F  +  D  
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 173 ----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P  ITY ++++                  G CK G++  A     S+        
Sbjct: 284 LGLPRPNSITYNLMLK------------------GFCKVGLLEDAKTLFESIRENDDLAS 325

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + SYN+ L+ L+  GK+ E E ++ +M  +G+ P++ +Y+IL+  LC+ G   DA  ++ 
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K  G+ PDA +Y  L+  YC  G++D A   L  M+ + CLP+    N +L +  K G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--------- 399
              +A E+  K+++ G   +  + N +   L  SG+  +A+ ++  M   G         
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 400 ----------IE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
                     IE    PD ITY++L++ LC+ G   EA  L  +M   + +P  ++YNI 
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           I  FCK  +I+ +  VL  M +KGC  +  TY  LI G+G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 240/545 (44%), Gaps = 81/545 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  L++   +AG  D+ L  + +M + G  P+ V+   ++  F +E +++ + +++E
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 241

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSL 151
            + + G  PD+  +N+ IS  CK  ++  A+++   +    +     P+ +TYN+M+   
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G++E A  +F+ +  ++   ++ +Y I +Q  +  G+  +A  +L +M         
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK GM+  A   V  ++  G  PD ++Y  LL    ++GK +  + L+ E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+     PN  T +IL+ SL + G+  +A ++LR   EKG   D  + + ++   C  G 
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 315 LDLAIEFL-----------------------DYMISDGCLPDIVNYNTILAA-------- 343
           LD AIE +                       D +I + CLPD++ Y+T+L          
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 344 ---------------------------FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                                      FCK G    A  + + +   GC  ++ +YN++ 
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L          G++ EM  KGI P+  TYN+ I  LC    V++A  LL +M      
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V S+  +I  FCK    + + EV        C   E  Y L+   +   G   +A EL
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATEL 720

Query: 497 ANALV 501
             A++
Sbjct: 721 LEAVL 725



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 237/501 (47%), Gaps = 32/501 (6%)

Query: 9   NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
           NP+   R+     +     +H +S D   T     I R     K  E +  + +++ +  
Sbjct: 15  NPRLAWRIFKRIFSSPSEESHGISLDATPT-----IARILVRAKMHEEIQELHNLILSSS 69

Query: 69  --KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY---GEPDVFAYNALISGFCKANQIE 123
             K  +     ++  F +    +KA    +++       +P V+ YN L+    K  ++E
Sbjct: 70  IQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVE 129

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
             + +   +   G +P   T+N++I +LC    +++A ++FD++    CKP   T+ IL+
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           +                  G CK G+  +  + + ++ES G  P+ + YN ++ +    G
Sbjct: 190 R------------------GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV---LRAAKEKGLT-PDA 299
           + ++ EK++ +M   GL P++VT++  IS+LC++GK  DA  +   +   +  GL  P++
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ ++  +CK G L+ A    + +  +  L  + +YN  L    ++G   +A  + ++
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           ++D G  P++ SYN +   L   G    A  ++  M   G+ PD +TY  L+   C  G 
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VD A  LL +M      P   + NI++    K  RI+E+ E+L  M EKG   +  T  +
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471

Query: 480 LIEGIGYGGWRAEAMELANAL 500
           +++G+   G   +A+E+   +
Sbjct: 472 IVDGLCGSGELDKAIEIVKGM 492



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 178/402 (44%), Gaps = 76/402 (18%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +++YN L+ G CK   +  A  ++  ++  G  PD VTY  ++   CS G +++A  +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             +++R+NC P   T  IL+ +    G+  +A +LL +M                 G+C 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 207 KGMVGQAFQFVRSLESRG-----------------------CQPDVISYNMLLRTLLNMG 243
            G + +A + V+ +   G                       C PD+I+Y+ LL  L   G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR--------------- 288
           ++ E + L  EM+   L+P+ V Y+I I   C+ GK   A  VL+               
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 289 --------------------AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
                                 KEKG++P+  +Y+  I   C+  +++ A   LD M+  
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              P++ ++  ++ AFCK  + D A E+FE    + C      Y+ MF+ L ++G  ++A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKA 717

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
             ++  +L +G E     Y  L+  LC+   ++ A G+L  M
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 150/387 (38%), Gaps = 76/387 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   ++ G+  E+   +  M   G   D V C  ++       + +KA+ +++ +  +G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 103 E------------------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
                                    PD+  Y+ L++G CKA +   A  +   +      
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           PD V YNI I   C +G I SAF+V   + +  C  ++ TY  LI    ++ Q  +   L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           +DEM                  + +G  P++ +YN  ++ L    K E+   L+ EM+ +
Sbjct: 617 MDEM------------------KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658

Query: 259 GLEPNVVTYSILISSLCR----------------------------------DGKTEDAV 284
            + PNV ++  LI + C+                                   G+   A 
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++L A  ++G     + Y  L+ + CK   L++A   L  MI  G   D      ++   
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSS 371
            K GN  +A    +K+ ++     V++
Sbjct: 779 GKMGNKKEANSFADKMMEMASVGEVAN 805



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%)

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P    YN L+    ++  V+    L  DM      P   ++N++I   C +  ++ + E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +   M EKGCKPNE T+ +L+ G    G   + +EL NA+ S
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 229/464 (49%), Gaps = 46/464 (9%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G  D++    + M   GC+P+      L++ + +   ++K + ++  + + G  P+   
Sbjct: 69  SGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVV 128

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LIS FCK  + + A K++D +R  G SPDVVT+N  I +LCS G +  A ++F  + 
Sbjct: 129 YNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188

Query: 169 RDNC----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            D      +P +ITY +++                   G CK+GM+ +A      ++   
Sbjct: 189 IDEVLGLPQPNIITYNLMLG------------------GFCKEGMLEEARALFEKMKVSE 230

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
              +  SYN+ L  L+ +GK  E + ++ EM+  G+EPNV +Y+I++  LC++G   DA 
Sbjct: 231 NLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            ++R     G+ PD  +Y  L+  YC  G++  A   L  M+ DGC P+    N +L + 
Sbjct: 291 MLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSL 350

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE--- 401
            K G   +A E+ +K+++ G   +  + N +   L ++G   +A+ +++ M + G     
Sbjct: 351 WKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALG 410

Query: 402 --------------------PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                               PD I+Y+++IS LC+ G V EA    ++M     +P    
Sbjct: 411 NLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAI 470

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           Y++ I  FCK  +I+ +  VL  M +KGC     TY  LI G+G
Sbjct: 471 YDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLG 514



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 182/370 (49%), Gaps = 22/370 (5%)

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
           R R     P +  YN+++ S    G ++    +   ++     P   T+ +LI      G
Sbjct: 11  RFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSG 70

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
             D A +L D+M                    +GC+P+  S+ +L+R     G   +G +
Sbjct: 71  CLDDARELFDKM------------------PEKGCEPNEYSFGILVRGYCRAGFTSKGLE 112

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+ EM   G  PN V Y+ LISS C++GKT+DA  ++   ++ GL+PD  +++  ISA C
Sbjct: 113 LLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALC 172

Query: 311 KDGRLDLAIEFLDYMISDGCL----PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             G++  A      M  D  L    P+I+ YN +L  FCK G  ++A  +FEK+      
Sbjct: 173 SSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENL 232

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            N  SYN     L   G  + A  ++ EM+  G+EP+  +YN ++  LC++G++ +A  L
Sbjct: 233 MNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARML 292

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           +  M S+   P  ++Y  ++ G+C T +++E+  VL  M   GC PN  T  +L+  +  
Sbjct: 293 MRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWK 352

Query: 487 GGWRAEAMEL 496
            G  +EA EL
Sbjct: 353 EGRISEAEEL 362



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 203/448 (45%), Gaps = 41/448 (9%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+++   EP+V++YN ++ G CK   +  A  ++  + S G  PD VTY  ++   C  G
Sbjct: 260 EMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTG 319

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A  V  +++RD C P   T  IL+ +   EG+  +A +LL +M             
Sbjct: 320 KVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCN 379

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNML 235
               G+C  G + +A + V  + + G                       C PD+ISY+ +
Sbjct: 380 IVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTI 439

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +  L   G+  E +K   EM+ + L+P+   Y + I S C++GK   A  VL+  ++KG 
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                +Y+ LI       ++      +D M   G  PD+  YN +L++ C+ G    A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + +++   G  PN+SS++ +  A   + D   A+  I E+        E  Y+   + L 
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACD-FSAVDEIFEIALNVCGHKEALYSLTFNELL 618

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G V +A  L        F      Y  +I   CK  +++++  +L  + +KG   +  
Sbjct: 619 VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPA 678

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSM 503
           +++ +I+G+G  G + EA ELA  ++ M
Sbjct: 679 SFMPVIDGLGKRGNKHEADELAEKMMEM 706



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 157/298 (52%), Gaps = 6/298 (2%)

Query: 211 GQAFQFVRSLESRGCQ--PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           G+A    +SL  R  +  P +  YN+LLR+    G+ +    L  +M++ G+ P   T++
Sbjct: 1   GKAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFN 60

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LI  LC  G  +DA ++     EKG  P+ YS+  L+  YC+ G     +E L  M   
Sbjct: 61  VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+ V YNT++++FCK G  D A ++ +++   G  P+V ++N   SAL SSG  + A
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180

Query: 389 LGMISEMLSKGI----EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +  +M    +    +P+ ITYN ++   C++GM++EA  L   M+ +       SYNI
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNI 240

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +LG  +  ++ E+  VL  M + G +PN  +Y ++++G+   G   +A  L   + S
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTS 298



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 76/387 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   ++ G+  E+   ++ M   G   D V C  +I       K +KA+ ++  +  +G
Sbjct: 346 LLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405

Query: 103 E------------------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
                                    PD+ +Y+ +ISG CKA ++  A K    +  +   
Sbjct: 406 SAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQ 465

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           PD   Y++ I S C  G I SAF+V   + +  C  T+ TY  LI               
Sbjct: 466 PDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLI--------------- 510

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              MG+  K  + + +  +  +  RG  PDV  YN +L +L   G+ ++   ++ EM+ +
Sbjct: 511 ---MGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQK 567

Query: 259 GLEPNVVTYSILISSLCR----------------------------------DGKTEDAV 284
           G+ PN+ ++SILI + C+                                   G+   A 
Sbjct: 568 GISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAK 627

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++   A ++      + Y  LI   CKD +LD A   L  +I  G   D  ++  ++   
Sbjct: 628 ELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGL 687

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSS 371
            K GN  +A E+ EK+ ++     V +
Sbjct: 688 GKRGNKHEADELAEKMMEMASEGKVKN 714



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 23/295 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+  E+      M+    +PD  +    I  F +E K + A RV++ +EK G    + 
Sbjct: 445 KAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQ 504

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G    NQI     ++D +R RG SPDV  YN ++ SLC  G ++ A  V D++
Sbjct: 505 TYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEM 564

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+    P + +++ILI+A        KA         C    V + F+   ++    C  
Sbjct: 565 LQKGISPNISSFSILIKAFC------KA---------CDFSAVDEIFEIALNV----CGH 605

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
               Y++    LL  G+  + ++L    + R  +     Y  LI  LC+D K +DA  +L
Sbjct: 606 KEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI---SDGCLPDIVNYNT 339
               +KG   D  S+ P+I    K G    A E  + M+   S+G + + V+ N 
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNA 720


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 29/441 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F   I+   + G  D ++  +E M   GC PDV++ + L+  F +  + ++A++++ 
Sbjct: 42  EVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLN 101

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +     P+   YNA + G C A + E   +++  +  +   P+  T++ +I SLC   +
Sbjct: 102 TM--LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRL 159

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E A +V +Q+ +    P V++Y  +I     + + D A+KLL  M              
Sbjct: 160 VEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM-------------- 205

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C+PD IS+N +L+ L    +W +  +L+ +M+ +    N +T++ILI SLC+
Sbjct: 206 -------LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 258

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G+ +DA++V     +    PD  +Y  LI+ + + G  ++A +    M    C  DI +
Sbjct: 259 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFS 315

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN  L   C     D A E+   +    C PN  ++N + S+L   G   RA+ +  +M 
Sbjct: 316 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMP 375

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             GI PD  TYN+LI+     G +D+A+  L  M      P  ISYN I+ G C+  R  
Sbjct: 376 KYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPC---EPDTISYNSILKGLCRAERWK 432

Query: 457 ESIEVLAAMFEKGCKPNETTY 477
           ++ +++  M  K C PNE T+
Sbjct: 433 DAEKLVTEMLRKNCTPNEVTF 453



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 225/483 (46%), Gaps = 95/483 (19%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD + YN ++ G C A Q E A +++  +      P+ VT+   I + C  G+++ A ++
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            +Q+ +  C P VI Y+ L+      G+ D+A+KLL+ M                     
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML-------------------- 104

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C+P+ + YN  L+ L   G+WEE  +L+ EM+ +   PN  T+S LI+SLC++   E A
Sbjct: 105 -CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYA 163

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V+VL   ++ G  PD  SY+ +IS +    R D A++ L  M+   C PD +++N +L  
Sbjct: 164 VEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKC 220

Query: 344 FCK-----------------------------------NGNADQALEIFEKLSDVGCPPN 368
            CK                                   NG    A+E+FE +    C P+
Sbjct: 221 LCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPD 280

Query: 369 VSSYNTMFSALWSSG------DKIRALG--------------------------MISEML 396
           + +Y+++ +     G      D  R++                           +I++M+
Sbjct: 281 IVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMV 340

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           ++   P+E+T+N LIS LC+ G+V+ A+ +   M      P + +YN +I G+ +  R++
Sbjct: 341 TEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLD 400

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRLN 515
           ++++ L+ M    C+P+  +Y  +++G+       +A +L   ++  +    + TFK  N
Sbjct: 401 DALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYAN 457

Query: 516 RTF 518
           + F
Sbjct: 458 QLF 460



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 36/380 (9%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           + +E +++ ++   RPNT           +   +K    AG+++E    I  MV   C P
Sbjct: 92  RVDEALKLLNTMLCRPNT---------VCYNAALKGLCIAGRWEEVGELIAEMVRKDCPP 142

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVL 129
           +    + LI    Q R    AV V+E ++KYG  PDV +YN +IS F  ++Q   A+  L
Sbjct: 143 NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF--SDQAR-ADDAL 199

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             L+S    PD +++N ++  LC       A ++  ++L+ +C+   +T+ ILI +    
Sbjct: 200 KLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQN 259

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           GQ   A+++ + M                 G  ++G+   AF   RS+    C+ D+ SY
Sbjct: 260 GQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSY 316

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N  L+ L    +W++  +L+ +M++    PN VT++ILISSLC+ G    A+DV     +
Sbjct: 317 NATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPK 376

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+TPD ++Y+ LI+ Y + GRLD A++FL  M    C PD ++YN+IL   C+      
Sbjct: 377 YGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKD 433

Query: 353 ALEIFEKLSDVGCPPNVSSY 372
           A ++  ++    C PN  ++
Sbjct: 434 AEKLVTEMLRKNCTPNEVTF 453



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 64/266 (24%)

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD Y+Y+ ++   C   + + A E +  MI + C P+ V + T + AFC+NG  D+A+
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG------------------------ 390
           E+ E++   GC P+V  Y+T+ +     G    AL                         
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIA 122

Query: 391 --------MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                   +I+EM+ K   P++ T+++LI+ LC++ +V+ AV +L  M+   + P V+SY
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 443 NIIILGF--------------------------------CKTRRINESIEVLAAMFEKGC 470
           N II  F                                CK +R  +++E++A M +K C
Sbjct: 183 NTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDC 242

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
           + NE T+ +LI+ +   G   +A+E+
Sbjct: 243 RINEMTFNILIDSLCQNGQVKDAIEV 268


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 231/486 (47%), Gaps = 23/486 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K    +G  D +   ++ M+A+GC+P+VV+ T LIK F Q  +   A+RV++ +++ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+F YN+LI G  KA +++ A   L  +   G  P+  TY   I          SA 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K   ++      P  +  T LI     +G+  +A      M                 G+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K   V  A +  R +  +G  PDV SY +L+     +G  ++   +  EM+  GL PNV
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y++L+   CR G+ E A ++L     KGL P+A +Y  +I  YCK G L  A    D 
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G +PD   Y T++   C+  + ++A+ IF   +  GC  + + +N + + ++  G 
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK 781

Query: 385 KIRALGMISEMLSKGIE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                 +++ ++    +    P+++TYN +I  LC++G ++ A  L   M++    PTVI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y  ++ G+ K  R  E   V       G +P+   Y ++I      G   +A+ L + +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 501 VSMHAI 506
            + +A+
Sbjct: 902 FAKNAV 907



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   AY +LI G+C+   +    ++L  ++ R       TY  ++  +CS G ++ A+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             +++   C+P V+ YT LI+  +   +   AM++L EM                  + +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM------------------KEQ 481

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD+  YN L+  L    + +E    + EM+  GL+PN  TY   IS      +   A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
              ++  +E G+ P+      LI+ YCK G++  A      M+  G L D   Y  ++  
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             KN   D A EIF ++   G  P+V SY  + +     G+  +A  +  EM+ +G+ P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I YN L+   CR G +++A  LL +M      P  ++Y  II G+CK+  + E+  +  
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  P+   Y  L++G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG 741



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 21/487 (4%)

Query: 45  KRSFRAGKF--DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++ FR      D +L   ESM+  G  P       LI    + ++   A  ++  ++  G
Sbjct: 248 EKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D   Y+ LI G  K    + A  ++  + S G +     Y+  I  +   G++E A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD ++     P    Y  LI+    E    +  +LL EM                 GM
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A+  V+ + + GC+P+V+ Y  L++T L   ++ +  +++ EM  +G+ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ LI  L +  + ++A   L    E GL P+A++Y   IS Y +      A +++  
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G LP+ V    ++  +CK G   +A   +  + D G   +  +Y  + + L+ +  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  KGI PD  +Y  LI+   + G + +A  +  +M      P VI YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           ++ GFC++  I ++ E+L  M  KG  PN  TY  +I+G    G  AEA  L + +  + 
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLK 726

Query: 505 AISRDTF 511
            +  D+F
Sbjct: 727 GLVPDSF 733



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 183/405 (45%), Gaps = 38/405 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+     SMV  G   D    T L+   F+  K + A  +   +   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF+Y  LI+GF K   ++ A+ + D +   G +P+V+ YN+++G  C  G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ D++      P  +TY  +I      G   +A +L DEM +  KG+V  +F +   ++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPDSFVYTTLVD 740

Query: 222 S------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE-- 261
                              +GC      +N L+  +   GK E    L TE+++R ++  
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE----LKTEVLNRLMDGS 796

Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                 PN VTY+I+I  LC++G  E A ++    +   L P   +Y  L++ Y K GR 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPPNVS 370
                  D  I+ G  PD + Y+ I+ AF K G   +AL + +++      D GC  ++S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +   + S     G+   A  ++  M+     PD  T   LI+  C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 11/399 (2%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   +  L  G+     IE A  V          P +    +++ +L     ++  + V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQT----DKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             ++  N    V TY +LI A    G      D   K   E       + G A +   S+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG-ALKLKESM 268

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  P   +Y++L+  L  + + E+ + L+ EM S G+  +  TYS+LI  L +    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  ++      G+    Y YD  I    K+G ++ A    D MI+ G +P    Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  +C+  N  Q  E+  ++       +  +Y T+   + SSGD   A  ++ EM++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+ + Y +LI    ++    +A+ +L +M+     P +  YN +I+G  K +R++E+  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            L  M E G KPN  TY   I G        EA E A+A
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGY------IEASEFASA 541



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 178/432 (41%), Gaps = 33/432 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           G  +E+++   S +     P +  C  L+    +  + +    V + ++E+    DV  Y
Sbjct: 165 GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + LI   C+A  ++L   VL +      +    T N+           + A K+ + ++ 
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTA---TLNV-----------DGALKLKESMIC 270

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P   TY +LI                   G+CK   +  A   +  ++S G   D 
Sbjct: 271 KGLVPLKYTYDVLID------------------GLCKIKRLEDAKSLLVEMDSLGVSLDN 312

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y++L+  LL     +  + L+ EM+S G+      Y   I  + ++G  E A  +   
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               GL P A +Y  LI  YC++  +    E L  M     +     Y T++   C +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A  I +++   GC PNV  Y T+      +     A+ ++ EM  +GI PD   YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  L +   +DEA   LV+M     +P   +Y   I G+ +      + + +  M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 470 CKPNETTYVLLI 481
             PN+     LI
Sbjct: 553 VLPNKVLCTGLI 564



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISR-------------------GLEPNVVTYSILI 271
           S++ L   L N G +E+   ++  MI R                   G   + V + IL 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
                 G  E+AV V  ++    L P       L+ A  +  RLDL  +    M+    +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D+  Y+ ++ A C+ GN     ++  K            + T  + L   G    AL +
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTE--------KEFRT--ATLNVDG----ALKL 264

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+ KG+ P + TY+ LI  LC+   +++A  LLV+M+S        +Y+++I G  K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 452 TRRINESIEVLAAMFEKG 469
            R  + +  ++  M   G
Sbjct: 325 GRNADAAKGLVHEMVSHG 342


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 226/479 (47%), Gaps = 19/479 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E       +  D     +  LI   F+AG   E+      +V  G   D+VMCT
Sbjct: 288 RLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCT 347

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+   F+  K  +A  +   L K    P+   Y ALI G+CK   +E    +L  +  +
Sbjct: 348 TLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK 407

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
             +P+V+TY+ +I     +G+++ A  V  ++L  N  P    Y ILI      G+ + A
Sbjct: 408 HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIA 467

Query: 196 MKLLDEMGMC----------------KKGM-VGQAFQFVRSLESRGCQPDVISYNMLLRT 238
             L +EM +                 K+G  + +A + ++ + SRG   D ++Y  L+  
Sbjct: 468 TDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDG 527

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               GK      ++ EM  + +  +VVTY++LI+ L   GK E A  V     E GL P+
Sbjct: 528 FFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPN 586

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ +I AYCK G LD A+E  + M S   +P  +  NT++    + G  ++A+ +  
Sbjct: 587 QATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLN 646

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++S +G  PN+  +  + +A   SG     L M  +++  G++ ++  YN+LI   CR  
Sbjct: 647 EMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLR 706

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           M  +A  +L  M    F    ++YN +I G+C++  + +++     M  +G  PN  TY
Sbjct: 707 MTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 243/551 (44%), Gaps = 82/551 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    +AG+   +L  +E M   G   D+V    LI  F +  + +KA  ++ EI 
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209

Query: 99  EKYG---------------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           E  G                     E D+  Y  +IS +CK + +E A  + + +   GF
Sbjct: 210 ESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGF 269

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            PDVVTY+ ++  LC  G +  A ++  ++ +    P  + YT LI +    G   +A  
Sbjct: 270 LPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
              ++                 G+ K     +A    R+L      P+ I+Y  L+    
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYC 389

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
            +G  E  E L+ EM  + + PNV+TYS +I+   + G  ++A++V++   ++ + P+AY
Sbjct: 390 KVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAY 449

Query: 301 SYDPLISAYCKDG-----------------------------------RLDLAIEFLDYM 325
            Y  LI  YCK G                                   R+D A E L  +
Sbjct: 450 VYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDV 509

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            S G L D VNY +++  F K G    AL + E++++   P +V +YN + + L   G K
Sbjct: 510 TSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG-K 568

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  + S M+  G+ P++ TYN +I   C+ G +D A+ L  +M+S +  P+ I+ N +
Sbjct: 569 YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTL 628

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           ++G  +   I +++ VL  M   G  PN   + +L+      G        ANA++ MH 
Sbjct: 629 VVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGK-------ANAVLQMHE 681

Query: 506 ISRDTFKRLNR 516
              D   ++N+
Sbjct: 682 QLVDMGLKINQ 692



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 236/494 (47%), Gaps = 40/494 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G  +++  F+  MV      D + C  L+K F +   +    R+M+ L   G   DV 
Sbjct: 89  QHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVI 148

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA------- 160
            +N LI G+CKA ++ LA  +++R+R  G   D+V+YN +I   C RG  + A       
Sbjct: 149 GFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEI 208

Query: 161 -----------FKVFDQLLRD---NCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
                      F + D++ +D   N +  +ITYT +I     +   ++A  L +EM    
Sbjct: 209 SESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIING 268

Query: 203 -------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+CK G + +A + +R ++  G  P+ ++Y  L+ +L   G   E  
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
              ++++ RG+  ++V  + L+  L +  K ++A D+ RA  +  L P++ +Y  LI  Y
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK G ++     L  M      P+++ Y++I+  + K G  D+A+ + +K+ D    PN 
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
             Y  +      +G +  A  + +EM   G++ + + ++ L++ L R   +DEA  LL D
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           + S       ++Y  ++ GF K  + + ++ ++  M EK    +  TY +LI G+   G 
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG- 567

Query: 490 RAEAMELANALVSM 503
           + EA  + + ++ M
Sbjct: 568 KYEAKSVYSGMIEM 581



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 200/454 (44%), Gaps = 79/454 (17%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+V+ +N L+  +CK   + LA   LD LR+     D VTYN +I   C  G++  AF  
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 164 FDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
              +++ D C  T IT  IL++                  G C+ G+     + + +L S
Sbjct: 100 LSIMVKKDTCFDT-ITCNILVK------------------GFCRIGLAKYGERIMDNLVS 140

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G   DVI +N L+      G+      L+  M   GL  ++V+Y+ LI+  C+ G+ + 
Sbjct: 141 GGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDK 200

Query: 283 AVDVLRAAKEK---------------------GLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           A  +L    E                       L  D  +Y  +IS YCK   L+ A   
Sbjct: 201 AKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARAL 260

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + MI +G LPD+V Y++I+   CK+G   +A E+  ++  +G  PN  +Y T+  +L+ 
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFK 320

Query: 382 SGDKIRALGMISEMLSKGIE-----------------------------------PDEIT 406
           +G    A    S+++ +G+                                    P+ IT
Sbjct: 321 AGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSIT 380

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +LI   C+ G ++    LL +ME     P VI+Y+ II G+ K   ++E+I V+  M 
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++   PN   Y +LI+G    G +  A +L N +
Sbjct: 441 DQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 216/442 (48%), Gaps = 20/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AGK + +      M  +G K + V+   L+    + ++ ++A  +++ +   G
Sbjct: 454 LIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRG 513

Query: 103 EP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D   Y +L+ GF KA +   A  +++ +  +    DVVTYN++I  L   G  E A 
Sbjct: 514 LLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AK 572

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V+  ++     P   TY I+I+A   +G+ D A++L +EM                  +
Sbjct: 573 SVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM------------------K 614

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S    P  I+ N L+  L   G+ E+   ++ EM   G+ PN+V + +L+++  + GK  
Sbjct: 615 SHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKAN 674

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
             + +     + GL  +  +Y+ LI  +C+      A   L YMI DG + D V YN ++
Sbjct: 675 AVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALI 734

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +C++ +  +AL  + ++ + G  PN+ +YN +   L  +G       +  +M   G+ 
Sbjct: 735 RGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLN 794

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  TY++LIS   + G   E++ L  +M +  F P   +YN++I  F K  +++++ E+
Sbjct: 795 PDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQAREL 854

Query: 462 LAAMFEKGCKPNETTYVLLIEG 483
           L  M  +G  P+ +TY +LI G
Sbjct: 855 LNEMQVRGVPPSSSTYDILICG 876



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 192/426 (45%), Gaps = 31/426 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  L+   F+AGK   +L  +E M       DVV    LI    +  K         
Sbjct: 518 HVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSG 577

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E    P+   YN +I  +CK  +++ A ++ + ++S    P  +T N ++  L   G 
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGE 637

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL---LDEMGM--------- 204
           IE A  V +++      P ++ + +L+ A+   G+ +  +++   L +MG+         
Sbjct: 638 IEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNN 697

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+  M  +A   ++ +   G   D ++YN L+R        ++     T+M++ G
Sbjct: 698 LIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEG 757

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+VTY++L+  L   G   +  ++    KE GL PDA +YD LIS Y K G    +I
Sbjct: 758 VSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESI 817

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
                M++ G +P    YN +++ F K G  DQA E+  ++   G PP+ S+Y+ +    
Sbjct: 818 RLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICG- 876

Query: 380 WSSGDK-------------IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           W +  K               A  +I+EM  KG  P + T   + S   R G + +A  L
Sbjct: 877 WCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKL 936

Query: 427 LVDMES 432
           L ++ S
Sbjct: 937 LKEIFS 942



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 209/474 (44%), Gaps = 78/474 (16%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           +R     P ++ +N +I    + G++     ++ ++L     P V T+ +L+ A    G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 192 TDKAMKLLDEM--------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
              A+ LL  +              G C+ G+V QAF F+  +  +    D I+ N+L++
Sbjct: 61  LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
               +G  + GE++M  ++S G   +V+ ++ LI   C+ G+   A+D++   +++GL  
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFL------------------DYMISDGCL---PDIVN 336
           D  SY+ LI+ +CK G  D A   L                  D +  D  L    D++ 
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y TI++ +CK    ++A  ++E++   G  P+V +Y+++ + L   G    A  ++ EM 
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAV---------GLLVDM-----------ESTR-- 434
             G++P+ + Y +LI  L + G   EA          G+ +D+           +S++  
Sbjct: 301 KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPK 360

Query: 435 -----FR--------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
                FR        P  I+Y  +I G+CK   +     +L  M EK   PN  TY  +I
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSII 420

Query: 482 EGIGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEI 527
            G    G   EA+ +   ++         ++AI  D + +  +     D+Y E+
Sbjct: 421 NGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 228/467 (48%), Gaps = 18/467 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKY 101
           ++K   + GK +E    IE     GC P+++    LI  + ++     A  + +E+  K 
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P V  Y A+I+GFCK    +  +++L  + SRG + +V  YN +I +    G I  A 
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGM 204
           +  + ++   CKP ++TY  LI  +  +G+  +A +LL++                    
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G   +A  ++  +  RG +PD+++Y  L+  L+  G+ +    +  +M+ RG+ P+ 
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+IL+S LC+  K   A  +L    ++ + PDA+ Y  L+  + ++G LD A +  + 
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            I  G  P IV YN ++  +CK G    A+    ++      P+  +Y+T+        D
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  M  EM+    +P+ +TY SLI+  CR G +  ++ +  +M++    P V++Y+I
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
           +I  FCK  ++ ++      M    C PN+ T+  L+ G    G RA
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 200/419 (47%), Gaps = 23/419 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYN----ALISGFCKANQIEL 124
           PDV+ C  L+    +  +   A ++  E+LE  G  D    N     ++ G CK  ++E 
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
             K+++    +G  P+++ YN +I   C +G +E A  +F +L      PTV TY  +I 
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G CKKG      + +  + SRG   +V  YN ++      G 
Sbjct: 283 ------------------GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
             +  + +  MI  G +P++VTY+ LIS  CRDGK  +A  +L  A  KGL P+ +SY P
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI AYCK G  D A  +L  M   G  PD+V Y  ++      G  D AL I EK+ + G
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+   YN + S L        A  +++EML + + PD   Y +L+    R+G +DEA 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            L          P ++ YN +I G+CK   + +++  +  M ++   P+E TY  +I+G
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 215/465 (46%), Gaps = 33/465 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           +I   ++ G   +++  IE M+  GCKPD+V    LI    ++ K ++A +++E  L K 
Sbjct: 315 IIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 374

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+ F+Y  LI  +CK    + A+  L  +  RG  PD+VTY  ++  L   G ++ A 
Sbjct: 375 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + +++L     P    Y IL+                   G+CKK  +  A   +  + 
Sbjct: 435 TIREKMLERGVFPDAGIYNILMS------------------GLCKKFKLPAAKLLLAEML 476

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +   PD   Y  L+   +  G  +E  KL    I +G+ P +V Y+ +I   C+ G  +
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 536

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA+  +   K++ L PD ++Y  +I  Y K   LD A +    M+   C P++V Y +++
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FC+ G+  ++L+IF ++   G  PNV +Y+ +  +       I A     EML     
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 402 PDEITYNSLISCLCRDGM--VDEA------------VGLLVDMESTRFRPTVISYNIIIL 447
           P+++T+N L++   ++G   + E             +     M S  + P   +YN I++
Sbjct: 657 PNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILI 716

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
             C+      ++++   M  KGC P+  ++V L+ G+   G   E
Sbjct: 717 CLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 218/458 (47%), Gaps = 33/458 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
           LI  S R GK  E+   +E  +  G  P+    T LI  + ++   ++A   ++E+ E+ 
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+  Y AL+ G   A ++++A  + +++  RG  PD   YNI++  LC +  + +A 
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD---EMGM-------------- 204
            +  ++L  +  P    Y  L+   +  G  D+A KL +   E GM              
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK GM+  A   +  ++ R   PD  +Y+ ++   +     +  +K+  EM+    +PNV
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI+  CR G    ++ + R  +  GL P+  +Y  LI ++CK+ +L  A  F + 
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649

Query: 325 MISDGCLPDIVNYNTILAAFCKNGN--------------ADQALEIFEKLSDVGCPPNVS 370
           M+ + C+P+ V +N ++  F KNG                   L  F ++   G  P  +
Sbjct: 650 MLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSA 709

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YN++   L   G    AL + ++M SKG  PD +++ +L+  +C +G   E   ++   
Sbjct: 710 AYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCN 769

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            + R     ++Y+ I+  +   +  +E+  +L  MFE+
Sbjct: 770 LNERELQIAVNYSSILDQYL-PQGTSEASVILQTMFEE 806



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 22/417 (5%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           G  + FAY++L+    ++        VL+ +R    SP     +I+I +    G++E A 
Sbjct: 90  GPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKAL 149

Query: 162 KVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKAMKLLDEM------------------ 202
           +++  +L+     P VI    L+   +  G+ + A KL DEM                  
Sbjct: 150 ELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI 209

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK+G + +  + +     +GC P++I YN L+      G  E    L  E+  +G
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P V TY  +I+  C+ G  +    +L     +GLT +   Y+ +I A  K G +  A+
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E ++ MI  GC PDIV YNT+++  C++G   +A ++ E+    G  PN  SY  +  A 
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G   RA   + EM  +G +PD +TY +L+  L   G VD A+ +   M      P  
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             YNI++ G CK  ++  +  +LA M ++   P+   Y  L++G    G   EA +L
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 44/325 (13%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP---NVVTYSILI 271
           Q+  +L++R  + +V++ ++    L  +   E G K   + +SRG      N   YS L+
Sbjct: 43  QWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFF-DWVSRGQYSGPINGFAYSSLL 101

Query: 272 SSLCRD------------------GKTEDAVD-VLRAAKEKGLTPDA----------YSY 302
             L R                     T +A+  V++A  + GL   A          Y+Y
Sbjct: 102 KLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTY 161

Query: 303 DP-------LISAYCKDGRLDLAIEFLDYMIS-DGCLPDIV-NYNT--ILAAFCKNGNAD 351
            P       L++   K GR+++A +  D M+  DG     V NY+T  ++   CK G  +
Sbjct: 162 FPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLE 221

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +  ++ E     GC PN+  YNT+       GD   A G+  E+  KG  P   TY ++I
Sbjct: 222 EGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAII 281

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           +  C+ G       LL++M S      V  YN II    K   I +++E +  M E GCK
Sbjct: 282 NGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK 341

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P+  TY  LI G    G  +EA +L
Sbjct: 342 PDIVTYNTLISGSCRDGKVSEADQL 366


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 231/486 (47%), Gaps = 23/486 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K    +G  D +   ++ M+A+GC+P+VV+ T LIK F Q  +   A+RV++ +++ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+F YN+LI G  KA +++ A   L  +   G  P+  TY   I          SA 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K   ++      P  +  T LI     +G+  +A      M                 G+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K   V  A +  R +  +G  PDV SY +L+     +G  ++   +  EM+  GL PNV
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y++L+   CR G+ E A ++L     KGL P+A +Y  +I  YCK G L  A    D 
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G +PD   Y T++   C+  + ++A+ IF   +  GC  + + +N + + ++  G 
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK 781

Query: 385 KIRALGMISEMLSKGIE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                 +++ ++    +    P+++TYN +I  LC++G ++ A  L   M++    PTVI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y  ++ G+ K  R  E   V       G +P+   Y ++I      G   +A+ L + +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 501 VSMHAI 506
            + +A+
Sbjct: 902 FAKNAV 907



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   AY +LI G+C+   +    ++L  ++ R       TY  ++  +CS G ++ A+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             +++   C+P V+ YT LI+  +   +   AM++L EM                  + +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM------------------KEQ 481

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD+  YN L+  L    + +E    + EM+  GL+PN  TY   IS      +   A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
              ++  +E G+ P+      LI+ YCK G++  A      M+  G L D   Y  ++  
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             KN   D A EIF ++   G  P+V SY  + +     G+  +A  +  EM+ +G+ P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I YN L+   CR G +++A  LL +M      P  ++Y  II G+CK+  + E+  +  
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  P+   Y  L++G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG 741



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 21/487 (4%)

Query: 45  KRSFRAGKF--DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++ FR      D +L   ESM+  G  P       LI    + ++   A  ++  ++  G
Sbjct: 248 EKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D   Y+ LI G  K    + A  ++  + S G +     Y+  I  +   G++E A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD ++     P    Y  LI+    E    +  +LL EM                 GM
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A+  V+ + + GC+P+V+ Y  L++T L   ++ +  +++ EM  +G+ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ LI  L +  + ++A   L    E GL P+A++Y   IS Y +      A +++  
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G LP+ V    ++  +CK G   +A   +  + D G   +  +Y  + + L+ +  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  KGI PD  +Y  LI+   + G + +A  +  +M      P VI YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           ++ GFC++  I ++ E+L  M  KG  PN  TY  +I+G    G  AEA  L + +  + 
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLK 726

Query: 505 AISRDTF 511
            +  D+F
Sbjct: 727 GLVPDSF 733



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 183/405 (45%), Gaps = 38/405 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK  E+     SMV  G   D    T L+   F+  K + A  +   +   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF+Y  LI+GF K   ++ A+ + D +   G +P+V+ YN+++G  C  G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ D++      P  +TY  +I      G   +A +L DEM +  KG+V  +F +   ++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPDSFVYTTLVD 740

Query: 222 S------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE-- 261
                              +GC      +N L+  +   GK E    L TE+++R ++  
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE----LKTEVLNRLMDGS 796

Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                 PN VTY+I+I  LC++G  E A ++    +   L P   +Y  L++ Y K GR 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPPNVS 370
                  D  I+ G  PD + Y+ I+ AF K G   +AL + +++      D GC  ++S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +   + S     G+   A  ++  M+     PD  T   LI+  C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 11/399 (2%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   +  L  G+     IE A  V          P +    +++ +L     ++  + V+
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQT----DKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             ++  N    V TY +LI A    G      D   K   E       + G A +   S+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG-ALKLKESM 268

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  P   +Y++L+  L  + + E+ + L+ EM S G+  +  TYS+LI  L +    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  ++      G+    Y YD  I    K+G ++ A    D MI+ G +P    Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  +C+  N  Q  E+  ++       +  +Y T+   + SSGD   A  ++ EM++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+ + Y +LI    ++    +A+ +L +M+     P +  YN +I+G  K +R++E+  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            L  M E G KPN  TY   I G        EA E A+A
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGY------IEASEFASA 541



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 156/377 (41%), Gaps = 32/377 (8%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV  Y+ LI   C+A  ++L   VL +      +    T N+           + A K+ 
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA---TLNV-----------DGALKLK 265

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           + ++     P   TY +LI                   G+CK   +  A   +  ++S G
Sbjct: 266 ESMICKGLVPLKYTYDVLID------------------GLCKIKRLEDAKSLLVEMDSLG 307

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
              D  +Y++L+  LL     +  + L+ EM+S G+      Y   I  + ++G  E A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +       GL P A +Y  LI  YC++  +    E L  M     +     Y T++   
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C +G+ D A  I +++   GC PNV  Y T+      +     A+ ++ EM  +GI PD 
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             YNSLI  L +   +DEA   LV+M     +P   +Y   I G+ +      + + +  
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 465 MFEKGCKPNETTYVLLI 481
           M E G  PN+     LI
Sbjct: 548 MRECGVLPNKVLCTGLI 564



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 33/258 (12%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISR-------------------GLEPNVVTYSILI 271
           S++ L   L N G +E+   ++  MI R                   G   + V + IL 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
                    E+AV V  ++    L P       L+ A  +  RLDL  +    M+    +
Sbjct: 159 DGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D+  Y+ ++ A C+ GN     ++  K            + T  + L   G    AL +
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTE--------KEFRT--ATLNVDG----ALKL 264

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+ KG+ P + TY+ LI  LC+   +++A  LLV+M+S        +Y+++I G  K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 452 TRRINESIEVLAAMFEKG 469
            R  + +  ++  M   G
Sbjct: 325 GRNADAAKGLVHEMVSHG 342


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 230/461 (49%), Gaps = 19/461 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            + + + ++    + KF+++L     M  +   P +V  ++L+    +  K    + +  
Sbjct: 44  RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            LE  G   D++++  LI  FC+  ++ LA   L ++   GF P +VT+  ++   C   
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
               A  + DQ++    +P V+ Y  +I +                  +C+KG V  A  
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDS------------------LCEKGQVNTALD 205

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            ++ ++  G +PDV++YN L+  L + G W    +++++M+  G+ P+V+T+S LI    
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G+  +A        ++ + P+  +Y+ LI+  C  G LD A + L+ ++S G  P+ V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++  +CK    D  ++I   +S  G   +  +YNT++     +G    A  ++  M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G+ PD  T+N L+  LC  G + +A+  L D++ ++    +I+YNIII G CK  ++
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            ++  +  ++  KG  P+  TY+ ++ G+       EA EL
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 222/473 (46%), Gaps = 29/473 (6%)

Query: 11  KSNERVRVSSSAET-RPNTHLLSF-DVKETQ-------FMKLIKRSFRAGKFDESLYFIE 61
           +S+ R R+ S   + + N  L  F D+ E+        F +L+    +  K++  +    
Sbjct: 44  RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
            +   G   D+   T LI  F +  + + A+  +  + K G EP +  + +L++GFC  N
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +   A  ++D++   G+ P+VV YN +I SLC +G + +A  V   + +   +P V+TY 
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
            LI      G    + ++L +M                     G  PDVI+++ L+    
Sbjct: 224 SLITRLFHSGTWGVSARILSDM------------------MRMGISPDVITFSALIDVYG 265

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+  E +K   EMI R + PN+VTY+ LI+ LC  G  ++A  VL     KG  P+A 
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ LI+ YCK  R+D  ++ L  M  DG   D   YNT+   +C+ G    A ++  ++
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              G  P++ ++N +   L   G   +AL  + ++         ITYN +I  LC+   V
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKP 472
           ++A  L   +      P VI+Y  +++G  + R   E+ E+   M  E G  P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 145/285 (50%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R LE  G   D+ S+  L+       +       + +M+  G EP++VT+  L++  C  
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +  +A+ ++      G  P+   Y+ +I + C+ G+++ A++ L +M   G  PD+V Y
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++     +G    +  I   +  +G  P+V +++ +       G  + A    +EM+ 
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + + P+ +TYNSLI+ LC  G++DEA  +L  + S  F P  ++YN +I G+CK +R+++
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +++L  M   G   +  TY  L +G    G  + A ++   +VS
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 4/292 (1%)

Query: 215 QFVRSLESRGCQPDVIS----YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             V +L  R C     S    Y   LR+ L+  K+ +   L  +M      P++V +S L
Sbjct: 26  NLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRL 85

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + ++ +  K E  + + R  +  G++ D YS+  LI  +C+  RL LA+  L  M+  G 
Sbjct: 86  LIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF 145

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P IV + +++  FC      +A+ + +++  +G  PNV  YNT+  +L   G    AL 
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++  M   GI PD +TYNSLI+ L   G    +  +L DM      P VI+++ +I  + 
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K  ++ E+ +    M ++   PN  TY  LI G+   G   EA ++ N LVS
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 70/153 (45%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL +F  +++    P++  ++ +  A+         + +   +   GI  D  ++ +L
Sbjct: 61  NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I C CR   +  A+  L  M    F P+++++  ++ GFC   R  E++ ++  +   G 
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +PN   Y  +I+ +   G    A+++   +  M
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 228/460 (49%), Gaps = 46/460 (10%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
           D +    + M   GCKP+      L++ + +   ++K + ++  +E +G  P+   YN +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +S FC+  + + + K+++++R  G  PD+VT+N  I +LC  G +  A ++F  +  D  
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 173 ----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P  ITY ++++                  G CK G++  A     S+        
Sbjct: 284 LGLPRPNSITYNLMLK------------------GFCKVGLLEDAKTLFESIRENDDLVS 325

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + SYN+ L+ L+  GK+ E E ++ +MI +G+ P++ +Y+IL+  LC+ G   DA  ++ 
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K  G++PDA +Y  L+  YC  G++D A   L  M+ + CLP+    N +L +    G
Sbjct: 386 LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--------- 399
              +A E+  K+++ G   +  + N +   L  SG+  +A+ ++  M   G         
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 400 ----------IE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
                     IE    PD ITY++L++ LC+ G   EA  L  +M   + +P  ++YNI 
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIF 565

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           I  FCK  +I+ +  VL  M +KGC  +  TY  LI G+G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 240/545 (44%), Gaps = 81/545 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  L++   +AG  D+ L  + SM + G  P+ V+   ++  F +E +++ + +++E
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVE 241

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSL 151
            + + G  PD+  +N+ IS  CK  ++  A+++   +    +     P+ +TYN+M+   
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G++E A  +F+ +  ++   ++ +Y I +Q  +  G+  +A  +L +M         
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSI 361

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+CK GM+  A   V  ++  G  PD ++Y  LL    ++GK +  + L+ E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+     PN  T +IL+ SL   G+  +A ++LR   EKG   D  + + ++   C  G 
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 315 LDLAIEFL-----------------------DYMISDGCLPDIVNYNTILAA-------- 343
           LD AIE +                       D +I + CLPD++ Y+T+L          
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 344 ---------------------------FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                                      FCK G    A  + + +   GC  ++ +YN++ 
Sbjct: 542 EAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L          G++ EM  KGI P+  TYN+ I  LC  G V++A  LL +M      
Sbjct: 602 LGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIA 661

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V S+  +I  FCK    + + EV        C   E  Y L+   +   G   +A EL
Sbjct: 662 PNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATEL 720

Query: 497 ANALV 501
             A++
Sbjct: 721 LEAVL 725



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 202/402 (50%), Gaps = 22/402 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P ++ YN L+    +  ++E  + +   +   G SP+  T+N++I +LC    +++A +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +FD++    CKP   T+ IL++                  G CK G+  +  + + S+ES
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVR------------------GYCKAGLTDKGLELLNSMES 210

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  P+ + YN ++ +    G+ ++ EKL+ +M   GL P++VT++  IS+LC++GK  D
Sbjct: 211 FGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270

Query: 283 AVDV---LRAAKEKGLT-PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           A  +   +   +  GL  P++ +Y+ ++  +CK G L+ A    + +  +  L  + +YN
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYN 330

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
             L    ++G   +A  + +++ D G  P++ SYN +   L   G    A  ++  M   
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ PD +TY  L+   C  G VD A  LL +M      P   + NI++       RI+E+
Sbjct: 391 GVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEA 450

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+L  M EKG   +  T  ++++G+   G   +A+E+   +
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 185/410 (45%), Gaps = 76/410 (18%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++++K   P +++YN L+ G CK   +  A  ++  ++  G SPD VTY  ++   CS G
Sbjct: 351 QMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVG 410

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +++A  +  +++R+NC P   T  IL+ +    G+  +A +LL +M             
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNML 235
               G+C  G + +A + V+ +   G                       C PD+I+Y+ L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR------- 288
           L  L   G++ E + L  EM+   L+P+ + Y+I I   C+ GK   A  VL+       
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 289 ----------------------------AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
                                         +EKG++P+  +Y+  I   C+ G+++ A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            LD M+     P++ ++  ++ AFCK  + D A E+FE    + C      Y+ MF+ L 
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELL 709

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++G  ++A  ++  +L +G E     Y  L+  LC+   ++ A G+L  M
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKM 759



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 161/301 (53%), Gaps = 6/301 (1%)

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           FQFVRS      +P +  YN+LL + +   + E    L  +M+  G+ P   T+++LI +
Sbjct: 98  FQFVRSRFPEN-KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRA 156

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC     + A ++     EKG  P+ +++  L+  YCK G  D  +E L+ M S G LP+
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPN 216

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V YNTI+++FC+ G  D + ++ EK+ + G  P++ ++N+  SAL   G  + A  + S
Sbjct: 217 KVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276

Query: 394 EM-LSKGI---EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           +M L + +    P+ ITYN ++   C+ G++++A  L   +       ++ SYNI + G 
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGL 336

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            +  +  E+  VL  M +KG  P+  +Y +L++G+   G  ++A  +   L+  + +S D
Sbjct: 337 VRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV-GLMKRNGVSPD 395

Query: 510 T 510
            
Sbjct: 396 A 396



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 160/383 (41%), Gaps = 53/383 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   +  G+  E+   +  M   G   D V C  ++       + +KA+ +++ +  +G
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 103 E------------------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
                                    PD+  Y+ L++G CKA +   A  +   +      
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           PD + YNI I   C +G I SAF+V   + +  C  ++ TY  LI    ++ Q  +   L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           +DEM                    +G  P++ +YN  ++ L   GK E+   L+ EM+ +
Sbjct: 617 MDEM------------------REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK 658

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAA-----KEKGLTPDAYSYDPLISAYCKDG 313
            + PNV ++  LI + C+    + A +V   A     +++GL   +  ++ L++A    G
Sbjct: 659 NIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLY--SLMFNELLAA----G 712

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +L  A E L+ ++  G       Y  ++ + CK    + A  I  K+ D G   + ++  
Sbjct: 713 QLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALM 772

Query: 374 TMFSALWSSGDKIRALGMISEML 396
            +   L   G+K  A     +M+
Sbjct: 773 PVIDGLGKMGNKKEANNFAEKMM 795



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 26/292 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+F E+      M+    +PD +     I  F ++ K + A RV++ +EK G    + 
Sbjct: 536 KAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G    NQI   + ++D +R +G SP++ TYN  I  LC  G +E A  + D++
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEM 655

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK---GMVGQAFQFVRSLESRG 224
           ++ N  P V ++  LI A                   CK     M  + F+   S+    
Sbjct: 656 MQKNIAPNVFSFKYLIGA------------------FCKVPDFDMAQEVFETAVSI---- 693

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C      Y+++   LL  G+  +  +L+  ++ RG E     Y  L+ SLC+  + E A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVAS 753

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            +L    +KG   D  +  P+I    K G    A  F + M+    + ++ N
Sbjct: 754 GILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVAN 805


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 228/460 (49%), Gaps = 23/460 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F +    F  L+K   ++G   +++     M  N   PD V    +I    + ++  +A 
Sbjct: 125 FHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAK 184

Query: 93  RVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            + + + K GE  P+   ++ALI GFCK   +E    +L+ +   G   DV  Y+ +I  
Sbjct: 185 ELFKEM-KGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            CS+G IE   ++F+++LR N  P V+TY+ L+ A   + +  +A ++LD M  CK    
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK---- 299

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
                          +PDV++Y +L   L   G+  +  K++  M+ RG EPN VTY+ +
Sbjct: 300 --------------VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-- 328
           I+ LC++G+ +DA+ +L    +KG  PD  +Y  L+   C  G++D A++ L+ ++S   
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEF 405

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PD+  +N ++   CK      A  ++  + + G P N+ +YN +     S+G   +A
Sbjct: 406 HIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +  + +  GI P+  TY  LI+ LC+  M+  A GL     ++  RPTV  YN ++  
Sbjct: 466 LELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMAS 525

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            C+   + ++  +   M      P+  ++ ++I+G    G
Sbjct: 526 LCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAG 565



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 227/475 (47%), Gaps = 55/475 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  +  E+    + M    CKP+ V  + LI  F +     +   ++E +EK G E DVF
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ALISGFC    IE   ++ + +  +  +P+VVTY+ ++ +LC +   + A ++ D +
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +P V+ YT+L       G+   A+K+LD M                 G+CK+G V
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT----------------- 253
             A   + ++  +G +PDV++Y+ L++ L  +GK +E   L+                  
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 254 --------------------EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
                                M+ RG   N+VTY+ILI      GK   A+++ + A + 
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G++P+A +Y  LI+  CK   L +A    +   + G  P +  YNT++A+ C+  + +QA
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +F+++ +    P+V S+N +      +GD   A  ++ EML+  + PD IT++ LI+ 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
             + G +DEA  L   M S    P  + ++ ++ G+    +  + + +L  M +K
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 182/382 (47%), Gaps = 22/382 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   + N LI    KA   +    V  ++ S    P   + + +I S  +      AF V
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +++      V  + +L++     G + KAM L   M                    R
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMM-------------------KR 157

Query: 224 GCQ-PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            C  PD +SYN ++  L    +  E ++L  EM     +PN VT+S LI   C++G  E+
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
              +L   ++ GL  D + Y  LIS +C  G ++   E  + M+     P++V Y+ ++ 
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A CK     +A ++ + ++     P+V +Y  +   L  +G    A+ ++  M+ +G EP
Sbjct: 278 ALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + +TYN++I+ LC++G VD+A+G+L  M     +P V++Y+ ++ G C   +I+E++++L
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397

Query: 463 AAMFEK--GCKPNETTYVLLIE 482
             +  K    KP+   + L+I+
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQ 419



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 139/268 (51%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P   S + L+ + +N  K      ++  ++ RG   NV  +++L+   C+ G +  A+D+
Sbjct: 92  PCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL 151

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               K   L PD  SY+ +I+  CK  RL  A E    M    C P+ V ++ ++  FCK
Sbjct: 152 FCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCK 211

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG+ ++   + E++  +G   +V  Y+ + S   S GD  R   + +EML K + P+ +T
Sbjct: 212 NGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVT 271

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L++ LC+     EA  +L  M   + RP V++Y ++  G  K  R +++I+VL  M 
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           ++G +PN  TY  +I G+   G   +A+
Sbjct: 332 KRGEEPNNVTYNAIINGLCKEGRVDDAL 359



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 191/402 (47%), Gaps = 56/402 (13%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYN 110
           K+ E+   +++M     +PDVV  T L     +  +++ A++V++++ K GE P+   YN
Sbjct: 284 KWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYN 343

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           A+I+G CK  +++ A  +L+ +  +G  PDVVTY+ ++  LC  G I+ A  + + L+  
Sbjct: 344 AIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK 403

Query: 171 --NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
             + KP V  + ++IQ                   +CK+  +  A +   ++  RG   +
Sbjct: 404 EFHIKPDVFAFNLVIQE------------------LCKQRRLRHAKRVYYTMVERGFPSN 445

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI----------------- 271
           +++YN+L+   L+ GK  +  +L  + +  G+ PN  TY++LI                 
Sbjct: 446 IVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFN 505

Query: 272 ------------------SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
                             +SLCR+   E A ++ +  +     PD  S++ +I    K G
Sbjct: 506 KKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAG 565

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            ++ A E L  M++   +PD + ++ ++  F K G  D+A  ++E++   G  P+   ++
Sbjct: 566 DVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFD 625

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           ++       G   + + M+ +M  K +  D    +++++CLC
Sbjct: 626 SLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 164/339 (48%), Gaps = 23/339 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL---EKYGEPD 105
           + G+ D++L  +E+M   G KPDVV  + L+K      K ++AV ++ +L   E + +PD
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD 410

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           VFA+N +I   CK  ++  A +V   +  RGF  ++VTYNI+I    S G +  A +++ 
Sbjct: 411 VFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWK 470

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKG 208
             +     P   TYT+LI           A  L ++                   +C++ 
Sbjct: 471 DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V QA    + + +    PDV+S+N+++   L  G  E  ++L+ EM++  L P+ +T+S
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ILI+   + G+ ++A  +       G  PDA  +D L+  Y   G+ +  +  L  M   
Sbjct: 591 ILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650

Query: 329 GCLPDIVNYNTILAAFC---KNGNADQALEIFEKLSDVG 364
             + D    +TILA  C   K+ + ++ L  F + + VG
Sbjct: 651 DVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVG 689



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 4/277 (1%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P   S N L+  L     ++    + ++M S  + P   + S LI S     K   A  V
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    ++G   + Y+++ L+  +C+ G    A++    M  +  +PD V+YNT++   CK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                +A E+F+++    C PN  +++ +      +GD     G++ EM   G+E D   
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y++LIS  C  G ++    L  +M      P V++Y+ ++   CK ++  E+ ++L  M 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM- 295

Query: 467 EKGCK--PNETTYVLLIEGIGYGGWRAEAMELANALV 501
             GCK  P+   Y +L +G+   G  ++A+++ + +V
Sbjct: 296 -TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 1/181 (0%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P   + NT++    K  + D  + +  K++ V   P  +S + +  +  ++     A G
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++  ++ +G   +   +N L+   C+ G   +A+ L   M+     P  +SYN +I G C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K +R+ E+ E+   M    CKPN  T+  LI+G    G   E   L   +  M  +  D 
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM-GLEGDV 234

Query: 511 F 511
           F
Sbjct: 235 F 235


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 234/490 (47%), Gaps = 58/490 (11%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P V+ C  LIKK    R+   A RV+E L+  G  D  ++N L++G+C+   +  A +V+
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERVV 173

Query: 130 DRLRSRG-------------------------------FSPDVVTYNIMIGSLCSRGMIE 158
           +  R+ G                                +PD  TYN ++  LC     E
Sbjct: 174 EAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYTYNTVLKGLCCAKQWE 233

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++  +++R++C P  +T+   I+A    G  D+A++LL++M                
Sbjct: 234 QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLV 293

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  + G V +A + + ++    C+P+ + YN  L+ L   G+WEE  +L+ EM+ +   
Sbjct: 294 NGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  T+S LI+SLC++   E AV+VL   ++ G  PD  SY+ +IS +    R D A++ 
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKL 410

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M+   C PD +++N +L   CK      A+E+  K+    C  N  ++N +  +L  
Sbjct: 411 LKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 467

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    A+ +   M      PD +TY+SLI+     G+ + A  L   M     R  + S
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPC---RADIFS 524

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN  + G C   R +++ E++A M  + C PNE T+ +LI  +   G    A+++   + 
Sbjct: 525 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM- 583

Query: 502 SMHAISRDTF 511
             + I+ D F
Sbjct: 584 PKYGITPDIF 593



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 181/348 (52%), Gaps = 30/348 (8%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFA 108
           AG+++E    I  MV   C P+    + LI    Q R    AV V+E ++KYG  PDV +
Sbjct: 331 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 390

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +IS  C ++Q   A+  L  L+S    PD +++N ++  LC       A ++  ++L
Sbjct: 391 YNTIIS--CFSDQAR-ADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKML 447

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
           + +C+   +T+ ILI +    GQ   A+++ + M                 G  ++G+  
Sbjct: 448 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 507

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            AF   RS+    C+ D+ SYN  L+ L    +W++  +L+ +M++    PN VT++ILI
Sbjct: 508 MAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILI 564

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           SSLC+ G    A+DV     + G+TPD ++Y+ LI+ Y + GRLD A++FL  M    C 
Sbjct: 565 SSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCE 621

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY---NTMF 376
           PD ++YN+IL   C+      A ++  ++    C PN  ++   N +F
Sbjct: 622 PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLF 669


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 237/524 (45%), Gaps = 67/524 (12%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H  +          LI+   + G+  ++   ++ M   G  P V     +I  + + 
Sbjct: 286 PNLHTYTL---------LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKS 336

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +   A+ +  ++E  G  PD + YN+LI G C     E A ++L+   +RGFSP V+T+
Sbjct: 337 GRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDE-AEELLNGAIARGFSPTVITF 395

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
             +I   C    I+ A +V   ++   CK  +  Y +LI   + + +  +A   L+E+  
Sbjct: 396 TNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFA 455

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                            CK G VG A +  +  E  GC+P+  +Y+ L+  L+   K  +
Sbjct: 456 NGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHK 515

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              L+T+M   G+ P V+TY+ LI   C+  + ++A  +    ++ GLTPD  +Y+ L  
Sbjct: 516 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTD 575

Query: 308 AYCKDGRLDLAIEFL--------------------------------DYMISDGCLPDIV 335
           A CK GR + A  FL                                + M+++GC  D  
Sbjct: 576 ALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSH 635

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+ +L A CK    ++AL I ++++  G   N+ +Y  + S +   G    A  M +EM
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +P  ITY   IS  C+ G ++EA  L+ +ME     P V++YN+ I G      +
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYM 755

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           + +   L  M +  C+PN  TY LL++           M LANA
Sbjct: 756 DCAFSTLKRMIDASCEPNYWTYWLLLKHF-------LKMSLANA 792



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 215/457 (47%), Gaps = 26/457 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           +V  G  PD V    +I  + +E     A R   +L + G E D +  NAL+ G+C+   
Sbjct: 174 LVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGD 233

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A  +L  +   G   +  +Y I+I  LC    +  A  +   +L+D C P + TYT+
Sbjct: 234 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTL 293

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI+    EG+   A  LLDEM                 G CK G +  A      +E  G
Sbjct: 294 LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PD  +YN L+  L   GK +E E+L+   I+RG  P V+T++ +I+  C+  K +DA+
Sbjct: 354 CNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDAL 412

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            V           D  +Y  LIS   K  RL  A + L+ + ++G  P++V Y +I+ A+
Sbjct: 413 RVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G    ALE+F+     GC PN  +Y+++   L       +A+ +I++M   GI P  
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           ITY +LI   C+    D A  L   ME     P   +YN++    CK+ R  E+   L  
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV- 591

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +KG    + TY  L++G      +A   E A AL+
Sbjct: 592 --KKGVVLTKVTYTSLVDGFS----KAGNTEFAAALI 622



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 233/507 (45%), Gaps = 38/507 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    + GK   +L   +     GC+P+    + LI    Q++K +KA+ ++  ++
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P V  Y  LI G CK ++ + A ++ + +   G +PD   YN++  +LC  G  E
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A+     L++     T +TYT L+      G T+ A  L+++M                
Sbjct: 585 EAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLL 641

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  + +A   +  +  RG + ++++Y +++  ++  GK +  + +  EMIS G +
Sbjct: 642 QALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 701

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +TY++ ISS C+ G+ E+A  ++   +  G+ PD  +Y+  I+     G +D A   
Sbjct: 702 PSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFST 761

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNA----------------DQALEIFEKLSDVGC 365
           L  MI   C P+   Y  +L  F K   A                D   ++ E++   G 
Sbjct: 762 LKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGL 821

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P   +Y+++ +    +     A  ++  ML K I P+E  Y  LI C C   + ++A  
Sbjct: 822 NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAAS 881

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            + +M    F+P + SY+ +I G C     +++  +   + E     NE  + +L +G+ 
Sbjct: 882 FVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLL 941

Query: 486 YGGWRAEAMELANALVSMHA-ISRDTF 511
             G      +L +A+ + H  I  +T+
Sbjct: 942 KAGHVDICSQLLSAMENRHCRIDSETY 968



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 214/502 (42%), Gaps = 72/502 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFA 108
            GK DE+   +   +A G  P V+  T +I  + +  K + A+RV  I+     + D+ A
Sbjct: 370 GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQA 429

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LIS   K ++++ A   L+ + + G SP+VV Y  +I + C  G + +A +VF    
Sbjct: 430 YGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTE 489

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            + C+P   TY+ LI   + + +  KAM L+ +M                 G CKK    
Sbjct: 490 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 549

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            AF+    +E  G  PD  +YN+L   L   G+ EE    +   + +G+    VTY+ L+
Sbjct: 550 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLV 606

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
               + G TE A  ++     +G   D+++Y  L+ A CK  +L+ A+  LD M   G  
Sbjct: 607 DGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVK 666

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            +IV Y  I++   K G  D A  +F ++   G  P+  +Y    S+    G    A  +
Sbjct: 667 GNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHL 726

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG-------------------------- 425
           I EM   G+ PD +TYN  I+     G +D A                            
Sbjct: 727 IGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK 786

Query: 426 -------------------------LLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
                                    LL  M      PT ++Y+ II GFCK  R+ E+  
Sbjct: 787 MSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACV 846

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  M  K   PNE  Y +LI+
Sbjct: 847 LLDHMLGKDISPNEEIYTMLIK 868



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 210/500 (42%), Gaps = 77/500 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +  K  +++  I  M  +G  P V+  T LI+   ++ + + A R+ E++E
Sbjct: 500 YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME 559

Query: 100 KYG-EPDVFAYN--------------------------------ALISGFCKANQIELAN 126
           + G  PD  AYN                                +L+ GF KA   E A 
Sbjct: 560 QNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAA 619

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +++++ + G   D  TY++++ +LC +  +  A  + DQ+     K  ++ YTI+I   
Sbjct: 620 ALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEM 679

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
           + EG+ D A  + +EM                   CK G + +A   +  +E  G  PDV
Sbjct: 680 IKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDV 739

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG----------- 278
           ++YN+ +    +MG  +     +  MI    EPN  TY +L+    +             
Sbjct: 740 VTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSG 799

Query: 279 -----KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
                K +    +L    + GL P A +Y  +I+ +CK  RL+ A   LD+M+     P+
Sbjct: 800 MWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 859

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              Y  ++   C     ++A      + + G  P++ SY+ + + L   GD  +A  +  
Sbjct: 860 EEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFC 919

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++L      +E+ +  L   L + G VD    LL  ME+   R    +Y+++      T 
Sbjct: 920 DLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMV------TN 973

Query: 454 RINESIEVLAAMFEKG-CKP 472
            I+E+    + M+E   C P
Sbjct: 974 NIHEA----SGMYESYMCAP 989



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 155/360 (43%), Gaps = 44/360 (12%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A Q +R    +        YN+ LR+LL     E   KL ++++  GL P+ VTY+ +I 
Sbjct: 132 AIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIM 191

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           + C++G    A    R  +E G+  D Y+ + L+  YC+ G L  A   L  M   GC  
Sbjct: 192 AYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRR 251

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS---------------------- 370
           +  +Y  ++   C+     +AL +   +   GC PN+                       
Sbjct: 252 NEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLL 311

Query: 371 -------------SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
                        +YN M      SG    ALG+ + M   G  PD+ TYNSLI  LC  
Sbjct: 312 DEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-G 370

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  DEA  LL    +  F PTVI++  II G+CK  +I++++ V + M    CK +   Y
Sbjct: 371 GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAY 430

Query: 478 VLLIEGIGYGGWRAEAME-----LANAL---VSMHAISRDTFKRLNRTFPLLDVYKEISH 529
            +LI  +       EA +      AN L   V ++    D + ++ +    L+V+K   H
Sbjct: 431 GVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEH 490



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 36/256 (14%)

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA+  +R A  K L      Y+  + +  +    +   +    ++ +G LPD V YNT++
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 342 AAFCKNGNADQALEIFEKLSD-----------------------------------VGCP 366
            A+CK G+   A   F  L +                                   +GC 
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            N  SY  +   L  +     AL ++  ML  G  P+  TY  LI  LC++G + +A  L
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L +M      P+V +YN +I G+CK+ R+ +++ +   M   GC P++ TY  LI G+  
Sbjct: 311 LDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC- 369

Query: 487 GGWRAEAMELANALVS 502
           GG   EA EL N  ++
Sbjct: 370 GGKPDEAEELLNGAIA 385


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 230/493 (46%), Gaps = 23/493 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F+ +I    RAG  +++L     +   GCKP V +   ++     E K      +  
Sbjct: 108 EDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN 167

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++ G E +V+ YN L+   CK ++++ A K+L  +  +G  PD V+Y  ++ S+C  G
Sbjct: 168 NMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLG 227

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------ 203
            +E A     + L    K  V  Y  LI     E + ++  +L +EM             
Sbjct: 228 KVEEA-----RELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYS 282

Query: 204 -----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                + + G V  A   +  +  RGC P+V ++  L++     G+  E   L   MI  
Sbjct: 283 TVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQE 342

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G EPN V Y+ LI  LC  GK  +AV V +  +  G+ P+  +Y  LI  + K G L  A
Sbjct: 343 GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGA 402

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E  + MI++GCLP++V Y  ++   C+N   + AL + E +++  CPPN  ++NT    
Sbjct: 403 SEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKG 462

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG    A+ ++++M   G  P+  TYN ++  L       EA+ ++ ++E    +  
Sbjct: 463 LCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSN 522

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +++YN I+ GFC       ++++   +   G KP+  TY  +I      G    A++L +
Sbjct: 523 LVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVD 582

Query: 499 ALVSMHAISRDTF 511
            L        D F
Sbjct: 583 RLTKKGEGYPDVF 595



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 249/522 (47%), Gaps = 47/522 (9%)

Query: 4   VVSCINPKSNER--------VRVSSSAETRPNTHLL-----------SFDVKETQFMKLI 44
           V++ INP  NE+          V +  +  PN  L            SF      +  +I
Sbjct: 21  VLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMI 80

Query: 45  KRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           KR       D   Y ++ M   G  C  D+ +   +I  + +   + +A++    + ++G
Sbjct: 81  KRLGYERDIDGIQYLLQLMKLEGISCNEDLFVI--VINAYRRAGLAEQALKTFYRIGEFG 138

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P V  YN ++      N+ ++ N + + ++  G   +V TYN+++ +LC    +++A 
Sbjct: 139 CKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAAR 198

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           K+  ++    C P  ++YT ++ +                  MC+ G V +A +    ++
Sbjct: 199 KLLAEMSYKGCIPDAVSYTTVVSS------------------MCRLGKVEEARELSMRIK 240

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S      V  YN L+       K EE  +L  EM   G++P+V+TYS +I++L   G  E
Sbjct: 241 SF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVE 295

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+ VL     +G +P+ +++  L+  Y   GRL  A++  + MI +G  P+ V YNT++
Sbjct: 296 MALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLI 355

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C  G   +A+ + +K+   G  PN ++Y+T+      +GD + A  + ++M++ G  
Sbjct: 356 HGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+ + Y  ++  LCR+ M + A+ L+ +M +    P  I++N  I G C + +   +++V
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           L  M + GC PN TTY  +++G+       EA+++   +  M
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEM 517



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 220/461 (47%), Gaps = 24/461 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  + D +   +  M   GC PD V  T ++    +  K  +A  +   ++ + 
Sbjct: 184 LLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF- 242

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
              V  YNALI+GFC+ +++E   ++ + +   G  PDV+TY+ +I +L   G +E A  
Sbjct: 243 ---VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALA 299

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V  ++    C P V T+T L++   + G+  +A+ L + M                 G+C
Sbjct: 300 VLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLC 359

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G + +A    + +E  G  P+  +Y+ L+      G      ++  +MI+ G  PNVV
Sbjct: 360 SYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVV 419

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ ++  LCR+     A+ ++         P+  +++  I   C  G+ + A++ L+ M
Sbjct: 420 VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P++  YN +L          +AL+I  ++ ++    N+ +YNT+ S    +G  
Sbjct: 480 RQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMF 539

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR--PTVISYN 443
             AL +  ++L  G +PD ITYN++I   C+ G V  A+ L VD  + +    P V +Y 
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQL-VDRLTKKGEGYPDVFTYT 598

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++ G C    ++E++  L  M  +G  PN  T+  L+ G+
Sbjct: 599 SLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 192/405 (47%), Gaps = 34/405 (8%)

Query: 2   STVVSCINPKSNERVRVSSSAET-----RPNTHLLSFDVKETQFMKLIKRSFRAGKFDES 56
           STV++ ++   N  + ++  A+       PN H          F  L+K  F  G+  E+
Sbjct: 282 STVINTLSEMGNVEMALAVLAKMFLRGCSPNVH---------TFTSLMKGYFMGGRLCEA 332

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISG 115
           L     M+  G +P+ V    LI       K  +AV V + +E+ G  P+   Y+ LI G
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F KA  +  A+++ +++ + G  P+VV Y  M+  LC   M   A  + + +   NC P 
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            IT+   I+     G+T+ AMK+L++M                     GC P+V +YN +
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQM------------------RQYGCAPNVTTYNEV 494

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L  L N  +  E  +++ E+    ++ N+VTY+ ++S  C  G  + A+ +       G 
Sbjct: 495 LDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT 554

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAAFCKNGNADQAL 354
            PD+ +Y+ +I AYCK G +  AI+ +D +   G   PD+  Y ++L   C     D+A+
Sbjct: 555 KPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAV 614

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
              +K+ + G  PN +++N +   L+S    +  + ++  +L+ G
Sbjct: 615 VHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILANG 659



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 35/194 (18%)

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ A+ + G A+QAL+ F ++ + GC P+V  YN +  AL S        G+ + M   G
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           IE +                                   V +YN+++   CK  R++ + 
Sbjct: 174 IELN-----------------------------------VYTYNMLLKALCKNDRVDAAR 198

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFP 519
           ++LA M  KGC P+  +Y  ++  +   G   EA EL+  + S   +         R   
Sbjct: 199 KLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHK 258

Query: 520 LLDVYKEISHLATK 533
           + +V++  + +A +
Sbjct: 259 MEEVFELFNEMAVE 272


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%), Gaps = 19/473 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
             +  LI     AGK  E+L F   M  +GC P V   T L+    +  +  +A+ +  E
Sbjct: 256 VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + E+  EP+V+ Y  LI   CK  +++ A K+L+ +  +G +P VV +N +IGS C RGM
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E A  V   +      P V TY  LI         D+AM LL++M              
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKM-------------- 421

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              +ES+   PDV++YN L+  L  +G  +   +L   MI  G  P+  T++  +  LCR
Sbjct: 422 ---VESK-LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+  +A  +L + KEK +  + ++Y  LI  YCK G+++ A      M+++ CLP+ + 
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++    K G    A+ + E ++     P + +YN +   +    D  RA  +++ ++
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G +P+ +TY + I   C  G ++EA  +++ +++         YN++I  +     ++
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            +  VL  MF  GC+P+  TY +L++ +     + E        VS+  IS D
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 247/513 (48%), Gaps = 35/513 (6%)

Query: 1   QSTVVSCINPKS-----NERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDE 55
            S + SC +P       N   R++++A    + H L+F +  T + +L+    R    DE
Sbjct: 110 NSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDE 169

Query: 56  SLYFIESMV---ANGCKPDVVMCTKLIKKFFQERKSNKAVR---VMEILEKYGEPDVFAY 109
            +   + M+    N   P+++    ++  +   +  N AV     + IL     PD+F Y
Sbjct: 170 MISLYKEMLTDNGNSVFPNLITLNTMLNSYC--KLGNMAVARLFFVRILRCEPGPDLFTY 227

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            +L+ G+C+ + +E A  V   +  R    + V+Y  +I  LC  G +  A + + ++  
Sbjct: 228 TSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMRE 283

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           D C PTV TYT+L+ A    G+  +A+ L  EM                    RGC+P+V
Sbjct: 284 DGCFPTVRTYTVLVCALCESGRELEALSLFGEM------------------RERGCEPNV 325

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y +L+  L   G+ +E  K++ EM+ +G+ P+VV ++ LI S C+ G  EDAV VL  
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + K + P+  +Y+ LI  +C+   +D A+  L+ M+     PD+V YNT++   C+ G 
Sbjct: 386 MESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGV 445

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A  +F  +   G  P+  ++N     L   G    A  ++  +  K ++ +E  Y +
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI   C+ G ++ A  L   M +    P  I++N++I G  K  ++ +++ ++  M +  
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            KP   TY +L+E +        A E+ N L+S
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 242/540 (44%), Gaps = 82/540 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LI    + G+ DE+L  +  MV  G  P VV    LI  + +      AV V+ ++E K 
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  YN LI GFC+   ++ A  +L+++     SPDVVTYN +I  LC  G+++SA 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++F  ++RD   P   T+   +      G+  +A ++L+ +                 G 
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK-------------------- 244
           CK G +  A    + + +  C P+ I++N+++  L   GK                    
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 245 ---------------WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                          ++   +++  +IS G +PNVVTY+  I + C  G+ E+A +++  
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC---- 345
            K +G+  D++ Y+ LI+AY   G LD A   L  M   GC P  + Y+ ++        
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690

Query: 346 -KNGNADQALEI------------------------FEKLSDVGCPPNVSSYNTMFSALW 380
            K G+    L++                        FEK+++ GC PN+++Y+ + + L 
Sbjct: 691 KKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLC 750

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    A  +   M   GI P EI +NSL+S  C+ GM  EAV LL  M        + 
Sbjct: 751 KVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLE 810

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SY ++I G  +     ++  V  ++   G   +E  + +LI+G+   G+  +  EL N +
Sbjct: 811 SYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLM 870



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 207/463 (44%), Gaps = 49/463 (10%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           LS DV    +  LI      G  D +      M+ +G  PD       +    +  +  +
Sbjct: 426 LSPDV--VTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGE 483

Query: 91  AVRVMEIL-EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A +++E L EK+ + +  AY ALI G+CKA +IE A  +  R+ +    P+ +T+N+MI 
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            L   G ++ A  + + + + + KPT+ TY IL++  + E   D+A ++L+ +       
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                       C +G + +A + V  +++ G   D   YN+L+     MG  +    ++
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL 663

Query: 253 TEMISRGLEPNVVTYSILISSLC-----RDGKTEDAVDV--------------------- 286
             M   G EP+ +TYSIL+  L      ++G     +DV                     
Sbjct: 664 RRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGIT 723

Query: 287 ---LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
                   E G  P+  +Y  LI+  CK GRL++A     +M   G  P  + +N++L++
Sbjct: 724 TVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS 783

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G   +A+ + + + +     ++ SY  +   L+   +K +A  +   +L  G   D
Sbjct: 784 CCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYD 843

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           E+ +  LI  L + G VD+   LL  ME    R    +Y++++
Sbjct: 844 EVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 27/380 (7%)

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK---PTVITYTILIQAT 186
           D      F   + +YN ++  L    M++    ++ ++L DN     P +IT   ++ + 
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNS- 198

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             CK G +  A   FVR L      PD+ +Y  L+         
Sbjct: 199 -----------------YCKLGNMAVARLFFVRILRCEP-GPDLFTYTSLVLGYCRNDDV 240

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E    +   M  R    N V+Y+ LI  LC  GK  +A++     +E G  P   +Y  L
Sbjct: 241 ERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVL 296

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           + A C+ GR   A+     M   GC P++  Y  ++   CK G  D+AL++  ++ + G 
Sbjct: 297 VCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGV 356

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V  +N +  +    G    A+G++  M SK + P+  TYN LI   CR   +D A+ 
Sbjct: 357 APSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMA 416

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           LL  M  ++  P V++YN +I G C+   ++ +  +   M   G  P++ T+   +  + 
Sbjct: 417 LLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLC 476

Query: 486 YGGWRAEAMELANALVSMHA 505
             G   EA ++  +L   H 
Sbjct: 477 RMGRVGEAHQILESLKEKHV 496


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 221/458 (48%), Gaps = 20/458 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    R G +  ++     + + G  P +   T LI  +  +   + A  ++  + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTIL 117

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P++  +N LI+GFC    +  A      L ++G+  D  +Y  +I  LC  G   
Sbjct: 118 KMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTR 177

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++  ++  D  +P +ITY+ +I                   G+CK  ++  A +   
Sbjct: 178 DALQLLQKMEEDLVRPNLITYSTVID------------------GLCKDRLIADALRLFS 219

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + SRG   DV++YN L+    ++G+W E  +L+T M+   + P+  T++IL+ +LC++G
Sbjct: 220 LVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEG 279

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +A  V     ++G  PD  +Y+ L+  +C    +  A E  + M+  G  PD++NYN
Sbjct: 280 RIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYN 339

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  +CK    D+A+ +F+++      PN+++YN++   L   G       ++ EM  +
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD +TYN  +   C+    ++A+ L   +    + P    Y++I+  FCK  ++  +
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLKIA 458

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E L  +   GC PN  TY ++I  +       EAM L
Sbjct: 459 EEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTL 496



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 203/405 (50%), Gaps = 19/405 (4%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           VS +   R +     + + E  +  LI    + G+  ++L  ++ M  +  +P+++  + 
Sbjct: 141 VSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYST 200

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I    ++R    A+R+  ++   G   DV AYN+LI G C   Q   A ++L  +    
Sbjct: 201 VIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGN 260

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
            +PD  T+NI++ +LC  G I  A  VF  +++   KP ++TY  L++   L     +A 
Sbjct: 261 INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +L + M                 G CK  MV +A    + +  +   P++ +YN L+  L
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
             +G+    ++L+ EM  RG  P++VTY+I + + C+    E A+ + R   + G+ PD 
Sbjct: 381 CKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDF 439

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           Y YD ++  +CK  +L +A E L +++  GC P++  Y  ++ A CK+ + D+A+ +  K
Sbjct: 440 YMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSK 499

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           + D  CPP+  ++ T+  AL    +  +A  +  EM+ +G+  DE
Sbjct: 500 MDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 189/406 (46%), Gaps = 18/406 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L K+  P +F ++ L+    +      A  +  +L S+G +P + T  I+I   C +  
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAH 105

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  AF +   +L+   +P ++T+  LI                   G C  GMV +A  F
Sbjct: 106 LSFAFSLLGTILKMGFQPNMVTFNTLIN------------------GFCINGMVSKAMAF 147

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              L ++G   D  SY  L+  L   G+  +  +L+ +M    + PN++TYS +I  LC+
Sbjct: 148 RLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           D    DA+ +      +G+  D  +Y+ LI   C  G+   A   L  M+     PD   
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++ A CK G   +A  +F  +   G  P++ +YN +      S +   A  + + M+
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +G+EPD + YN LI+  C+  MVDEA+ L  ++      P + +YN +I G CK  R++
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              E++  M ++G  P+  TY + ++         +A+ L   +V 
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ 433



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 211/436 (48%), Gaps = 21/436 (4%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKAN 120
           +++  G +P++V    LI  F      +KA+     L   G P D F+Y +LI+G CK  
Sbjct: 115 TILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNG 174

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           Q   A ++L ++      P+++TY+ +I  LC   +I  A ++F  +        V+ Y 
Sbjct: 175 QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYN 234

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            LI      GQ  +A +LL  M                  +CK+G + +A      +  R
Sbjct: 235 SLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD+++YN L+          E  +L   M+ RGLEP+V+ Y++LI+  C+    ++A
Sbjct: 295 GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEA 354

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + + +  + K L P+  +Y+ LI   CK GR+    E +D M   G  PDIV YN  L A
Sbjct: 355 MVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDA 414

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGIEP 402
           FCK+   ++A+ +F ++   G  P+   Y+ +    +  G+K++ A   +  +L  G  P
Sbjct: 415 FCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVEN-FCKGEKLKIAEEALQHLLIHGCCP 472

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +  TY  +I+ LC+D   DEA+ LL  M+     P  +++  II    +    +++ ++ 
Sbjct: 473 NVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLR 532

Query: 463 AAMFEKGCKPNETTYV 478
             M E+G   +E   V
Sbjct: 533 LEMIERGLVNDEARLV 548



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 162/340 (47%), Gaps = 18/340 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++     F+++LR +  P +  +  L+ A +  G    A+ L  +               
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQ--------------- 80

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              L S+G  P + +  +L+    +         L+  ++  G +PN+VT++ LI+  C 
Sbjct: 81  ---LHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCI 137

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G    A+        KG   D +SY  LI+  CK+G+   A++ L  M  D   P+++ 
Sbjct: 138 NGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+T++   CK+     AL +F  ++  G   +V +YN++     S G    A  +++ M+
Sbjct: 198 YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMV 257

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              I PD+ T+N L+  LC++G + EA G+   M     +P +++YN ++ GFC +  ++
Sbjct: 258 RGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVS 317

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           E+ E+   M ++G +P+   Y +LI G        EAM L
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVL 357



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 2/160 (1%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
            ++ M   G  PD+V     +  F + +   KA+ +   + +   PD + Y+ ++  FCK
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCK 451

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             ++++A + L  L   G  P+V TY IMI +LC     + A  +  ++  ++C P  +T
Sbjct: 452 GEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVT 511

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +  +I A     +TDKA KL   + M ++G+V    + V 
Sbjct: 512 FETIIGALQERNETDKAEKL--RLEMIERGLVNDEARLVH 549


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 199/384 (51%), Gaps = 18/384 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L +   P    +N ++    K+        +  ++  RG  P++V  NI+I   C  G+
Sbjct: 78  LLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGL 137

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           I  AF VF ++L+    P  IT+T LI+                  G+C KG + QA  F
Sbjct: 138 IPFAFSVFAKILKMGYNPNTITFTTLIK------------------GLCLKGQIHQALNF 179

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              L + G Q + ISY  L+  L  +G+      L+  +  + ++PNVV YS +I  +C+
Sbjct: 180 HDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK 239

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           D    DA D+      KG++P+  +Y  LIS +   G+L  A++  + MIS+   PD+  
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++  FCK+G    AL++ +++ D G PPN+ +Y+++  AL  +    +A+ +++++ 
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +GI P+  TY  LI  LC  G +++A  +  D+    +  TV++Y ++  GFCK    +
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419

Query: 457 ESIEVLAAMFEKGCKPNETTYVLL 480
           E+  +L+ M E GC P+  TY L+
Sbjct: 420 EASALLSKMEENGCIPDAKTYELI 443



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 186/396 (46%), Gaps = 18/396 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           ++  Y++  + F   N ++ A  + + L  +  +P  + +N ++GSL       +   + 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++     KP ++   ILI                     C+ G++  AF     +   G
Sbjct: 111 KKMEFRGIKPNLVNCNILINC------------------FCQLGLIPFAFSVFAKILKMG 152

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+ I++  L++ L   G+  +      ++++ G + N ++Y  LI  LC+ G+T  A+
Sbjct: 153 YNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAAL 212

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           D+LR    K + P+   Y  +I   CKD  ++ A +    M+S G  P++V Y+ +++ F
Sbjct: 213 DLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
              G    A+++F K+      P+V ++N +      SG    AL ++ EM  +G  P+ 
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI 332

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY+S++  LC+   VD+AV LL  ++    RP + +Y I+I G C + ++ ++  +   
Sbjct: 333 VTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFED 392

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  KG      TY+++  G    G   EA  L + +
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 174/386 (45%), Gaps = 19/386 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    ++  +   LY  + M   G KP++V C  LI  F Q      A  V   +
Sbjct: 89  EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 148

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G  P+   +  LI G C   QI  A    D+L + GF  + ++Y  +I  LC  G  
Sbjct: 149 LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A  +  ++     +P V+ Y+ +I                   GMCK   V  AF   
Sbjct: 209 RAALDLLRRVDGKLVQPNVVMYSTIID------------------GMCKDKHVNDAFDLY 250

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + S+G  P+V++Y+ L+     +GK ++   L  +MIS  ++P+V T++IL+   C+ 
Sbjct: 251 SEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKS 310

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK   A+ ++    ++G  P+  +Y  ++ A CK  R+D A+  L  +   G  P++  Y
Sbjct: 311 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTY 370

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             ++   C +G  + A  IFE L   G    V +Y  MF      G    A  ++S+M  
Sbjct: 371 TILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEE 430

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEA 423
            G  PD  TY  +   L + G  D A
Sbjct: 431 NGCIPDAKTYELIKLSLFKKGENDMA 456



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 191/395 (48%), Gaps = 19/395 (4%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           +++ Y+    +  S   ++ A  +F+ LLR N  P  I +  ++ +              
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGS-------------- 96

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               + K           + +E RG +P++++ N+L+     +G       +  +++  G
Sbjct: 97  ----LVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 152

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             PN +T++ LI  LC  G+   A++        G   +  SY  LI   CK G    A+
Sbjct: 153 YNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAAL 212

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + L  +      P++V Y+TI+   CK+ + + A +++ ++   G  PNV +Y+ + S  
Sbjct: 213 DLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           ++ G    A+ + ++M+S+ I+PD  T+N L+   C+ G +  A+ L+ +M      P +
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI 332

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-AN 498
           ++Y+ I+   CKT R+++++ +L  + ++G +PN  TY +LI+G+   G   +A  +  +
Sbjct: 333 VTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFED 392

Query: 499 ALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
            LV  + I+  T+  +   F    ++ E S L +K
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSK 427



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 18/210 (8%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           MV+ G  P+VV  + LI  FF   K   AV +  +++ +  +PDV+ +N L+  FCK+ +
Sbjct: 253 MVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGK 312

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           I  A K++D +  RG  P++VTY+ ++ +LC    ++ A  +  +L     +P + TYTI
Sbjct: 313 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTI 372

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI      G+ + A  + +++                 G CKKG+  +A   +  +E  G
Sbjct: 373 LIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENG 432

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           C PD  +Y ++  +L   G+ +  EKL  E
Sbjct: 433 CIPDAKTYELIKLSLFKKGENDMAEKLHRE 462



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 1/154 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++GK   +L  ++ M   G  P++V  + ++    +  + +KAV ++  L+  G  P++ 
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G C + ++E A  + + L  +G+   VVTY +M    C +G+ + A  +  ++
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
             + C P   TY ++  +   +G+ D A KL  E
Sbjct: 429 EENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 218/450 (48%), Gaps = 20/450 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R GK DE+   ++ M  +GC PDVV  T LI      RK + A+ +   ++     PD  
Sbjct: 276 RDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV 335

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L+  F     ++   K+   + + G++PDVVT+ I++ +LC  G I  AF + D +
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +    P + TY  LI   +   + D A+ L   M                  ES G +P
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM------------------ESLGVEP 437

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +L+      G   +  +   +M +RG+ PN+V  +  + SL   G+  +A  + 
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  GL PD+ +Y+ ++  Y K G++D AI+ L  M    C PD++  N+++    K 
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++A ++F ++ ++   P V +YN + + L   G   +A+ +   M   G  P+ IT+
Sbjct: 558 GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L+ CLC++  VD A+ +   M +   RP V+++N II GF K  +I  +I +   M +
Sbjct: 618 NTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-K 676

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           K  +P+  T   L+ G+   G   +A  + 
Sbjct: 677 KLLRPDHVTLCTLLPGVIKSGQIEDAFRIT 706



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 239/487 (49%), Gaps = 28/487 (5%)

Query: 33  FDVKETQFMK--------LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           FD+ + Q ++        + K  F  G   ++   +E M   G   +      LI    Q
Sbjct: 147 FDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQ 206

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
                +A+ V   +   G +P +  ++AL+    K   I+    +L+ + S G  P++ T
Sbjct: 207 SGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYT 266

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y I I  L   G I+ A+++  ++  D C P V+TYT+LI A     + D AM L  +M 
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM- 325

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
                            +S   +PD ++Y  LL    + G  ++ EK+ TEM + G  P+
Sbjct: 326 -----------------KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           VVT++IL+++LC+ G+  +A D+L   +++G+ P+ ++Y+ LIS   +  RLD A++   
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFS 428

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M S G  P    Y  ++    K+G+  +ALE FEK+   G  PN+ + N    +L   G
Sbjct: 429 NMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  M +E+ S G+ PD +TYN ++ C  + G VDEA+ LL +M   +  P VI  N
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN 548

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +I    K  R+ E+ ++   M E    P   TY +L+ G+G  G   +A++L  ++ + 
Sbjct: 549 SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM-NG 607

Query: 504 HAISRDT 510
           H  S +T
Sbjct: 608 HGCSPNT 614



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 137/540 (25%), Positives = 240/540 (44%), Gaps = 56/540 (10%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  + +   N   L  +     ++ LI    ++G   ++L   E M A G  P++V C 
Sbjct: 419 RLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACN 478

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             +    +  +  +A  +   L+  G  PD   YN ++  + K  Q++ A K+L  +   
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              PDV+  N +I +L   G +E A+++F ++   N  PTV+TY IL+     EGQ  KA
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKA 598

Query: 196 MKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           ++L + M                  +CK   V  A +    + +  C+PDV+++N ++  
Sbjct: 599 VQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHG 658

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV-------------- 284
            +   + +    L  +M  + L P+ VT   L+  + + G+ EDA               
Sbjct: 659 FIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNI 717

Query: 285 ------DVL-----RAAKEKGLT-----------PDAYSYDPLISAYCKDGRLDLAIE-F 321
                 DV+      A  EK +             D     P+I   CK  +  +A   F
Sbjct: 718 DRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVF 777

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           + +    G  P +  YN ++  F +  N + A  +FE++   GC P+  +YN++  A   
Sbjct: 778 VKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGK 837

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           SG       +  EML++G +P+ ITYN +IS L +   +D+A+ L  ++ S  F PT  +
Sbjct: 838 SGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  +I G  K+ R++++ E+   M   GC+PN   Y +L+ G G  G    A E    +V
Sbjct: 898 FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 176/370 (47%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK  +  +A  V  +  +  G  P +  YN++I        +E A+ +F+++   
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P   TY  LI A    G+ ++   L DEM                   +RGC+P+ I
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEM------------------LTRGCKPNTI 861

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            +YNM++  L+   + ++   L   ++S    P   T+  LI  L + G+ +DA ++    
Sbjct: 862  TYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGM 921

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
               G  P++  Y+ L++ Y K G +D A EF   M+ +G  PD+ +Y  ++   C  G  
Sbjct: 922  VHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRV 981

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D AL  FEKL   G  P++ +YN M + L  S     AL +  EM ++GI PD  TYNSL
Sbjct: 982  DDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSL 1041

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            I  L   GM++EA  +  +++    +P V +YN +I G+  +     +  +   M   GC
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101

Query: 471  KPNETTYVLL 480
             PN  T+  L
Sbjct: 1102 DPNTGTFAQL 1111



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 222/513 (43%), Gaps = 56/513 (10%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            LI   ++AG+ +E+      M      P VV    L+    +E +  KAV++ E +  +G
Sbjct: 550  LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              P+   +N L+   CK ++++LA K+  ++ +    PDV+T+N +I     +  I++A 
Sbjct: 610  CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL----------------------- 198
             +F Q+ +   +P  +T   L+   +  GQ + A ++                       
Sbjct: 670  WLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGG 728

Query: 199  -LDEMGMCKKGMVGQAFQ------------------------------FVRSLESRGCQP 227
             L E G  K  + G+                                 FV+  +  G +P
Sbjct: 729  ILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKP 788

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             +  YN+L+   L +   E    L  EM S G  P+  TY+ LI +  + GK  +  D+ 
Sbjct: 789  TLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLY 848

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 +G  P+  +Y+ +IS   K  RLD A++    ++S    P    +  ++    K+
Sbjct: 849  DEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS 908

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            G  D A E+F+ +   GC PN + YN + +     G    A      M+ +GI PD  +Y
Sbjct: 909  GRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSY 968

Query: 408  NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
              L+  LC  G VD+A+     ++     P +++YN++I G  +++R  E++ +   M  
Sbjct: 969  TILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028

Query: 468  KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +G  P+  TY  LI  +G  G   EA ++   L
Sbjct: 1029 RGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 223/535 (41%), Gaps = 90/535 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    +AG+ +E+   +++M   G  P++     LI    +  + + A+ +   +E
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP  + Y  LI    K+     A +  +++++RG +P++V  N  + SL   G + 
Sbjct: 432 SLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLG 491

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F++L      P  +TY ++++     GQ D+A+KLL EM   +            
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ------------ 539

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                 C+PDVI  N L+ TL   G+ EE  ++   M    L P VVTY+IL++ L ++G
Sbjct: 540 ------CEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEG 593

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP------ 332
           + + AV +  +    G +P+  +++ L+   CK+  +DLA++    M +  C P      
Sbjct: 594 QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFN 653

Query: 333 ----------------------------DIVNYNTILAAFCKNGNADQALEIFEKL-SDV 363
                                       D V   T+L    K+G  + A  I E     V
Sbjct: 654 TIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQV 713

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR------- 416
           G   + S +  +   + +     +A+     ++ + I  D+     +I  LC+       
Sbjct: 714 GSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVA 773

Query: 417 ------------------------DGM-----VDEAVGLLVDMESTRFRPTVISYNIIIL 447
                                   DG      V+ A  L  +M+S    P   +YN +I 
Sbjct: 774 RNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLID 833

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              K+ +INE  ++   M  +GCKPN  TY ++I  +       +AM+L   LVS
Sbjct: 834 AHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS 888



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 22/368 (5%)

Query: 132 LRSRGFSPDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
            +S G  P+VV    T N M+  L     +E    VFD + R   +  V TY I+ ++  
Sbjct: 111 FKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLF 170

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           + G   +A   L++M   + G V  A+                SYN L+  LL  G  +E
Sbjct: 171 IRGGLRQAPSALEKMR--EAGFVLNAY----------------SYNGLIHFLLQSGFCKE 212

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             ++   M+S GL+P++ T+S L+ +  +    +  + +L   +  GL P+ Y+Y   I 
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
              +DG++D A   +  M  DGC PD+V Y  ++ A C     D A+ +F K+      P
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  +Y T+       G   +   + +EM + G  PD +T+  L++ LC+ G ++EA  LL
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M      P + +YN +I G  +  R+++++++ + M   G +P   TY+LLI+  G  
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 488 GWRAEAME 495
           G   +A+E
Sbjct: 453 GHPGKALE 460



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 28/212 (13%)

Query: 25   RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
            RPN+ + +          L+    + G  D +  F + MV  G +PD+   T L+     
Sbjct: 927  RPNSAIYNI---------LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCI 977

Query: 85   ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
              + + A+   E L++ G +PD+ AYN +I+G  ++ + E A  +   +++RG  PD+ T
Sbjct: 978  AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037

Query: 144  YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
            YN +I +L   GMIE A K++++L     KP V TY  LI+   L G ++ A       G
Sbjct: 1038 YNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELA------YG 1091

Query: 204  MCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            + KK MVG            GC P+  ++  L
Sbjct: 1092 IYKKMMVG------------GCDPNTGTFAQL 1111


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 217/458 (47%), Gaps = 18/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           LI+    +G+       +   +  G  P      KLI  F Q +       V+  ++ + 
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P ++ Y  +I+G CK  +   A +V + L+ RG++PD V Y  MI  LC  G    A 
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K++ +++    +P   TY  ++  ++  G  ++A +L +EM                  +
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C +G   +AF+  + +   G Q D I+YN L+R     GK +E   L+ E++++  +P+V
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y +LI   C+DG  E A  +L     KGL P+AY+YD ++    K G  +   E  + 
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
             + G        N I++  C  G +D+A E+F+K+S+ G   +  +YN++       G 
Sbjct: 534 TCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGK 593

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +++ +++E++++G++P   +Y SLI  LC++G  + A  L  DM S    P       
Sbjct: 594 VGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREH 653

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +I G CK  R  E ++ L  M E   KP +  +  L E
Sbjct: 654 LISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 217/460 (47%), Gaps = 25/460 (5%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDV----VMCTKLIKKFFQERKSNKAVRVMEILEKYG- 102
            +AGK +    F + M+  G   D     V C  LI+ F    +  +   ++    K G 
Sbjct: 202 LKAGKTELLFEFYQEMIKAGTASDANTETVGC--LIQAFCDSGQVARGYELLNQFLKTGL 259

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P    YN LI+GFC+A      ++VL  + +R   P + TY  +I  LC       A++
Sbjct: 260 DPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYR 319

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           VF+ L      P  + YT +I                   G+C+ G  G+A +    +  
Sbjct: 320 VFNDLKDRGYAPDRVMYTTMIH------------------GLCEMGSFGEARKLWFEMMD 361

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G QP+  +YN +L   L  G +E   +L  EM ++G     VT + +IS LC  GK+++
Sbjct: 362 KGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDE 421

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A +V +   E G+  DA +Y+ LI  +CK+G++D  +  L+ +++    P +  Y  ++ 
Sbjct: 422 AFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLII 481

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK+G+ + A  +   +S  G  PN  +Y+TM      SGD      + +E  +KG   
Sbjct: 482 KSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGT 541

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
              T N +IS LC  G  DEA  +   M  T  +   I+YN +I GFCK  ++ +S+ +L
Sbjct: 542 TTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLL 601

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +  +G +P+ ++Y  LI  +   G    A  L   +VS
Sbjct: 602 NELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVS 641



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 180/366 (49%), Gaps = 18/366 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELA 125
           G  PD VM T +I    +     +A ++  E+++K  +P+ + YN ++ G  K+   E A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++ + + ++G+    VT N +I  LCSRG  + AF+VF ++     +   ITY  LI+ 
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ D+ M LL+E+                   CK G    A + +  + S+G  P+
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPN 507

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             +Y+ +L   L  G +E   +L  E  ++G      T + +IS LC  GK+++A ++ +
Sbjct: 508 AYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFK 567

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G+  DA +Y+ LI  +CK+G++  ++  L+ +++ G  P   +Y +++   C+NG
Sbjct: 568 KMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNG 627

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +A+ A  ++  +   G  P+ +    + S L   G     +  +  ML   I+P +  + 
Sbjct: 628 DAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFE 687

Query: 409 SLISCL 414
            L  CL
Sbjct: 688 DLAECL 693



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  + N L      A  +  A  V D     GF PD  +    +  LC  G IE A +V
Sbjct: 122 PDPISSNMLFEALLDAKAVRAAKMVRD---IAGFIPDSASLEQYVKCLCGVGFIEEAIEV 178

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GM 204
           + QL     + +++    ++   +  G+T+   +   EM                     
Sbjct: 179 YFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAF 238

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V + ++ +      G  P   +YN L+        +    +++  MI+R   P +
Sbjct: 239 CDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTI 298

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY  +I+ LC++ +  +A  V    K++G  PD   Y  +I   C+ G    A +    
Sbjct: 299 YTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFE 358

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  P+   YNT+L    K+G+ ++A E++ ++ + G      + N + S L S G 
Sbjct: 359 MMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGK 418

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  +M   GI+ D ITYNSLI   C++G VDE + LL ++ +   +P+V  Y +
Sbjct: 419 SDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYEL 478

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +I+  CK      +  +L  M  KG  PN  TY  ++ G    G      EL N
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYN 532



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 18/282 (6%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEK 100
           K+I      GK DE+    + M   G + D +    LI+ F +E K ++ + ++ E++ +
Sbjct: 408 KIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQ 467

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             +P V  Y  LI   CK    E A ++L  + S+G  P+  TY+ M+      G  E  
Sbjct: 468 DPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHV 527

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            +++++        T  T   +I      G++D+A ++  +M                 G
Sbjct: 528 RELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRG 587

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CK+G VG++   +  L ++G QP   SY  L+  L   G  E  ++L  +M+S+G+EP+
Sbjct: 588 FCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPH 647

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
                 LIS LC+ G+  + +D L    E  + P   +++ L
Sbjct: 648 ANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 7/279 (2%)

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PD IS NML   LL+  K     K++ ++   G  P+  +    +  LC  G  E+A+
Sbjct: 120 CTPDPISSNMLFEALLD-AKAVRAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAI 176

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI---L 341
           +V    KE G+     + + ++S   K G+ +L  EF   MI  G   D  N  T+   +
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASD-ANTETVGCLI 235

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            AFC +G   +  E+  +    G  P   +YN + +    + +      ++  M+++   
Sbjct: 236 QAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHL 295

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P   TY  +I+ LC++    EA  +  D++   + P  + Y  +I G C+     E+ ++
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKL 355

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
              M +KG +PN  TY  ++ G    G    A EL N +
Sbjct: 356 WFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEM 394


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 242/485 (49%), Gaps = 19/485 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +  +FDE+   ++ M   G  P+ V+   LI  + +    + A+++ + +   G
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+    N+LI G+CK+NQ+E A  +L+ + + G   +  T+  +I  LC +   +SA 
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
               ++L  N KP     T+L+      G+  +A++L   +                 G+
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G   +A + ++ +  RG   D ISYN L+      GK EEG KL  EM+ RG++P++
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY++L+  LC  GK E+A  +    K+ G  PDAY+Y  +I  YCK  R++   +    
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M++     + V Y T++ A+C+NGN  +A  + + +   G P   ++Y+++   L + G 
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ EM  +G+ P+ + Y +LI   C+ G + +   +L +M      P  I+Y I
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G CK   +  + ++L  M +KG  P+  TY  L  G    G   EA+++ + L+S  
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD-LMSTG 751

Query: 505 AISRD 509
            IS D
Sbjct: 752 GISLD 756



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 201/418 (48%), Gaps = 19/418 (4%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + +  F  +I R     +FD +L FI  M+    KP+  + T L+    Q  K ++A+ +
Sbjct: 370 INQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIEL 429

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
              +LEK    +    NALI G C+A   E A K+L  +  RG   D ++YN +I + C 
Sbjct: 430 WYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCK 489

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G +E  FK+ ++++R   +P + TY +L+                   G+C  G + +A
Sbjct: 490 EGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH------------------GLCNMGKIEEA 531

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                  +  G  PD  +Y +++       + EEGEKL  EM++  +E N V Y  LI +
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRA 591

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C +G   +A  +    + +G+   + +Y  LI      G +D A + LD M  +G  P+
Sbjct: 592 YCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPN 651

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y  ++  +CK G   +   I +++S     PN  +Y  M +     G+   A  +++
Sbjct: 652 VVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLN 711

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           EM  KGI PD +TYN+L +  C++G ++EA+ +   M +       I+Y  +I G+ K
Sbjct: 712 EMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 205/462 (44%), Gaps = 18/462 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    R G    +L   + M++NG  P+ V C  LI+ + +  +   A  ++E +L
Sbjct: 305 YNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEML 364

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
              G  +   + ++I   C   + + A   +  +  R F P+     +++  LC  G   
Sbjct: 365 TGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQS 424

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +++ +LL        +T   LI      G  ++A KLL EM                
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              CK+G V + F+    +  RG QPD+ +YNMLL  L NMGK EE   L  E    G  
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF 544

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  TY I+I   C+  + E+   + +      +  +A  Y  LI AYC++G +  A   
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M S G       Y++++      G  D A ++ +++   G  PNV  Y  +      
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G   +   ++ EM    + P++ITY  +I+  C+ G +  A  LL +M      P  ++
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +  GFCK  ++ E+++V   M   G   ++ TY  LI+G
Sbjct: 725 YNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 192/390 (49%), Gaps = 18/390 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +   N L+S   KAN+++++ +V D +   G +PDV  ++ M+ + C+ G ++ A ++
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++ +    P V+TY  +I                   G+CK G + +AFQF   +E  
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIH------------------GLCKNGRLDEAFQFKEKMEKE 261

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
             +P +++Y +L+  L+ + +++E   ++ EM  RG  PN V Y+ LI   CR G    A
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +       G++P++ + + LI  YCK  +++ A   L+ M++ G + +   + +++  
Sbjct: 322 LQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHR 381

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C     D AL    ++      PN      + S L  +G +  A+ +   +L KG   +
Sbjct: 382 LCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAAN 441

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T N+LI  LC  G  +EA  LL +M         ISYN +IL  CK  ++ E  ++  
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            M  +G +P+  TY +L+ G+   G   EA
Sbjct: 502 EMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 147/286 (51%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G  F+    L ++G  P + + N LL +L+   + +   ++   M   G+ P+V  +S +
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +++ C  G+ +DA+++ R  ++ G+ P+  +Y+ +I   CK+GRLD A +F + M  +  
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV 263

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +V Y  ++    K    D+A  I +++SD G  PN   YNT+       G+   AL 
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQ 323

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  +M+S GI P+ +T NSLI   C+   ++ A  LL +M +        ++  +I   C
Sbjct: 324 IRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC 383

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              R + ++  +  M  +  KPN+    LL+ G+   G ++EA+EL
Sbjct: 384 LKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIEL 429



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           F++F  L      P++ T   L+ + +   +   + ++ D M  C               
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHC--------------- 191

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  PDV  ++ ++      G+ ++  +L  +M   G+ PNVVTY+ +I  LC++G+ 
Sbjct: 192 ---GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRL 248

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A       +++ + P   +Y  LI+   K  R D A   L  M   G  P+ V YNT+
Sbjct: 249 DEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTL 308

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  +C+ GN   AL+I + +   G  PN  + N++      S     A  ++ EML+ G 
Sbjct: 309 IDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
             ++ T+ S+I  LC     D A+  +++M    F+P      +++ G C+  + +E+IE
Sbjct: 369 VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIE 428

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +   + EKG   N  T   LI G+   G + EA +L
Sbjct: 429 LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 303 DPLISAYC---KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           D LI  Y    K     +  E    + + G  P +   N +L++  K      + ++F+ 
Sbjct: 128 DLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDI 187

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   G  P+V  ++TM +A  + G    A+ +  +M   G+ P+ +TYN++I  LC++G 
Sbjct: 188 MCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR 247

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +DEA      ME  R +P++++Y ++I G  K  R +E+  +L  M ++G  PN   Y  
Sbjct: 248 LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307

Query: 480 LIEGIGYGGWRAEAMELANALVS 502
           LI+G    G  + A+++ + ++S
Sbjct: 308 LIDGYCRIGNISTALQIRDDMIS 330


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 214/468 (45%), Gaps = 56/468 (11%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP---DVFAYNALISGFCKANQIE 123
           GCKPD+   T L+K    ++ S +A+ ++ I+  +      DV AY  +I+G  +  Q++
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  + D +  RG SPDVVTY+ +I +L     ++ A +VF +++++   P  I YT L+
Sbjct: 226 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 285

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G C  G   +A    + +   G +PDV++Y  L+  L   G
Sbjct: 286 H------------------GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K  E  K+   ++ RG +P+  TY  L+     +G   +  D+L    +KG+    + ++
Sbjct: 328 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 387

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++ AY K  ++D A+     M   G  PDIVNY T+L   C  G  D AL  F  L   
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 447

Query: 364 GCPPNVSSYNTMFSAL-----W------------------------------SSGDKIRA 388
           G  PN+  + T+   L     W                                G  I A
Sbjct: 448 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 507

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   M+  GIEP+  TYN+LI   C DG +DEA+ LL  M     +P+ ++YN II G
Sbjct: 508 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 567

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +  RI + + +L  M  KG  P   TY +L++G+   G    A EL
Sbjct: 568 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 205/429 (47%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    R G+ D++    ++M+  G  PDVV  + +I    + +  +KA +V   + 
Sbjct: 211 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 270

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   Y +L+ G+C + + + A  +  ++   G  PDVVTY  ++  LC  G   
Sbjct: 271 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 330

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD L++   KP   TY  L+     EG   +   LLD M   KKGM  Q    + 
Sbjct: 331 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM--MKKGM--QLGHHI- 385

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                        +NM++       K +E   + + M  +GL P++V Y  ++  LC  G
Sbjct: 386 -------------FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 432

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + +DA+    + K +GL P+   +  LI   C   + D   E    MI  G   D + +N
Sbjct: 433 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 492

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+   CK G   +A  +F+ +  +G  PN ++YNT+       G    A+ ++  M+  
Sbjct: 493 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 552

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P ++TYN++I+   ++G +++ + LL +M+     P +++Y +++ G  +  R   +
Sbjct: 553 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAA 612

Query: 459 IEVLAAMFE 467
            E+   M +
Sbjct: 613 KELYLRMIK 621



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 201/420 (47%), Gaps = 24/420 (5%)

Query: 88  SNKAVRVMEILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSP-DV 141
             +A+R+  +L +  E    PD+F+Y  L+ G C     + A  +L  +   +G  P DV
Sbjct: 149 GGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDV 208

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           V Y  +I  L   G ++ A+ +FD +L     P V+TY+ +I A       DKA ++   
Sbjct: 209 VAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQV--- 265

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
                         F R +++ G  PD I Y  L+    + GK +E   +  +M   G+E
Sbjct: 266 --------------FTRMVKN-GVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE 310

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+ L+  LC++GK+ +A  +  +  ++G  PD+ +Y  L+  Y  +G L    + 
Sbjct: 311 PDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDL 370

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M+  G       +N I+ A+ K+   D+AL +F  +   G  P++ +Y T+   L +
Sbjct: 371 LDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCT 430

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    AL   + + S+G+ P+ + + +LI  LC     D+   L  +M         I 
Sbjct: 431 AGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 490

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +N I+   CK  R+ E+  +   M   G +PN  TY  LI+G    G   EAM+L   +V
Sbjct: 491 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV 550



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 211/538 (39%), Gaps = 135/538 (25%)

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKAN---QIELANKVLDRLRSRGFSPDVVTYNI 146
           A +V + L K G+   +F  N  +S   +A+    I L N+ + R  +   +P++ TY I
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAISLFNR-MPRAGATSAAPNIATYGI 104

Query: 147 MIGSLCSRGMIESAFKV---------------------------------FDQLLRD--- 170
           +IG     G ++ AF                                    D +LR    
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPE 164

Query: 171 -NCKPTVITYTIL-------------------------------------IQATMLEGQT 192
             CKP + +YTIL                                     I   + EGQ 
Sbjct: 165 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 224

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           DKA  L D M                  + K   + +A Q    +   G  PD I Y  L
Sbjct: 225 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 284

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +    + GK +E   +  +M   G+EP+VVTY+ L+  LC++GK+ +A  +  +  ++G 
Sbjct: 285 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 344

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL------------------------ 331
            PD+ +Y  L+  Y  +G L    + LD M+  G                          
Sbjct: 345 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 404

Query: 332 -----------PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
                      PDIVNY T+L   C  G  D AL  F  L   G  PN+  + T+   L 
Sbjct: 405 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 464

Query: 381 S--SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           +    DK+  L    EM+ +GI  D I +N+++  LC+ G V EA  L   M      P 
Sbjct: 465 TCDKWDKVEELAF--EMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPN 522

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +YN +I G+C   +++E++++L  M   G KP++ TY  +I G    G   + + L
Sbjct: 523 TNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTL 580



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 16/283 (5%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL--EPNVVTYSILISSLCRDGKTEDAV 284
           P++ +Y +++     +G+ +     +  +I+ GL  EPN +  S     LC  G     +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQ-GPLCTAGGRAMRM 155

Query: 285 D-VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYNTIL 341
           D VLR   E G  PD +SY  L+   C D     A++ L  M      C  D+V Y T++
Sbjct: 156 DIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVI 215

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               + G  D+A  +F+ + D G  P+V +Y+++ SAL  +    +A  + + M+  G+ 
Sbjct: 216 NGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVM 275

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD I Y SL+   C  G   EA+G+   M      P V++Y  ++   CK  +  E+ ++
Sbjct: 276 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 335

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
             ++ ++G KP+ TTY  L+ G    G          ALV MH
Sbjct: 336 FDSLVKRGHKPDSTTYGTLLHGYATEG----------ALVEMH 368


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 223/432 (51%), Gaps = 22/432 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            +E +     M+ +   P +V  +K++ K  + +  +  + +   +E  G   D+++YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  C+ ++  +A  V+ ++   G+ PDVVT + +I   C    +  A  +  ++    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+ Y  +I                   G CK G+V  A +    +E  G + D ++
Sbjct: 170 FRPDVVIYNTIID------------------GSCKIGLVNDAVELFDRMERDGVRADAVT 211

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+  L   G+W +  +LM +M+ R + PNV+T++ +I    ++GK  +A+ +     
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + + PD ++Y+ LI+  C  GR+D A + LD M++ GCLPD+V YNT++  FCK+   D
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +  ++F +++  G   +  +YNT+    + +G    A  + S M S+   P+  TY+ L+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILL 388

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC +  V++A+ L  +M+ +     + +YNI+I G CK   + ++ ++  ++  KG K
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448

Query: 472 PNETTYVLLIEG 483
           P+  +Y  +I G
Sbjct: 449 PDVVSYTTMISG 460



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 50/369 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  +F  +L  +  M+  G +PDVV  + LI  F Q  +   A+ ++  +E+ G  PDV 
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I G CK   +  A ++ DR+   G   D VTYN ++  LC  G    A ++   +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +  +  P VIT+T +I   + EG+  +AMKL +EM                 G+C  G V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL---------- 260
            +A Q +  + ++GC PDV++YN L+       + +EG KL  EM  RGL          
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 261 ----------------------EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
                                  PN+ TYSIL+  LC + + E A+ +    ++  +  D
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ +I   CK G ++ A +    +   G  PD+V+Y T+++ FC+    D++  ++ 
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475

Query: 359 KLSDVGCPP 367
           K+ + G  P
Sbjct: 476 KMQEDGLLP 484



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 187/397 (47%), Gaps = 21/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ ++S   K+   +L   +   +   G   D+ +YNI+I  LC       A  V
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P V+T + LI                   G C+   V  A   V  +E  
Sbjct: 127 VGKMMKFGYEPDVVTVSSLIN------------------GFCQGNRVFDAIDLVSKMEEM 168

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PDV+ YN ++     +G   +  +L   M   G+  + VTY+ L++ LC  G+  DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             ++R    + + P+  ++  +I  + K+G+   A++  + M      PD+  YN+++  
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +G  D+A ++ + +   GC P+V +YNT+ +    S        +  EM  +G+  D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITYN++I    + G  D A  +   M+S   RP + +Y+I++ G C   R+ +++ +  
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M +   + + TTY ++I G+   G   +A +L  +L
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 18/340 (5%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E    +F ++++    P+++ ++ ++         D  + L   M +C           
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC----------- 98

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                  G   D+ SYN+++  L    ++     ++ +M+  G EP+VVT S LI+  C+
Sbjct: 99  -------GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
             +  DA+D++   +E G  PD   Y+ +I   CK G ++ A+E  D M  DG   D V 
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN+++A  C +G    A  +   +      PNV ++  +       G    A+ +  EM 
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            + ++PD  TYNSLI+ LC  G VDEA  +L  M +    P V++YN +I GFCK++R++
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           E  ++   M ++G   +  TY  +I+G    G    A E+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 80/152 (52%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N ++ +++F K+      P++  ++ + S +  S +    + +   M   GI  D  +YN
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I+CLCR      A+ ++  M    + P V++ + +I GFC+  R+ ++I++++ M E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           G +P+   Y  +I+G    G   +A+EL + +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L + +K + V  P     +   FS   SS +    + +  +M+     P  + ++ ++S 
Sbjct: 19  LCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSK 78

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           + +    D  + L   ME       + SYNI+I   C+  R   ++ V+  M + G +P+
Sbjct: 79  IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             T   LI G   G    +A++L + +  M
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 236/470 (50%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++  F+  MV     P+      LI  +    +  +AVRV + + ++   PDV 
Sbjct: 266 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L+   CK  +I+ A  V D +  +G +PDV +YNIM+    ++G +     +FD +
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P   T+ +LI+A    G  DKAM + +EM                  +C+ G +
Sbjct: 386 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  PD  +YN L++     G   + ++L++E+++ G+  ++V +S +
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL PDA  Y  L+  YC  G+++ A+   D M+S G 
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+   Y+ +   L+ +G  + A  
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  D  TYN ++  L ++   DEA+ L  ++ +   +  +I+ N +I G  
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +TRR+ E+ ++ A++      P+  TY ++I  +   G   EA ++ +++
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 29/473 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIE 123
           GC PDV   + L+K    + KS +A  ++ ++ + G    P+V AYN +I GF K   + 
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +   +  RG  PD+VTYN ++ +LC    ++ A     Q++     P   TY  LI
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                 GQ  +A+++  EM                        PDV++ +ML+ +L   G
Sbjct: 297 YGYSSTGQWKEAVRVFKEM------------------RRHSILPDVVTLSMLMGSLCKYG 338

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K +E   +   M  +G  P+V +Y+I+++     G   D  D+       G+ PD Y+++
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 398

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI AY   G LD A+   + M   G  PD+V Y T++AA C+ G  D A+E F ++ D 
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P+  +YN +     + G  ++A  +ISE+++ G+  D + ++S+I+ LC+ G V +A
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +     +    P  + Y++++ G+C   ++ +++ V  AM   G +PN   Y  L+ G
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578

Query: 484 IGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEIS 528
               G   E + L   ++         +++I  D   +  RT P    + E++
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 241/479 (50%), Gaps = 29/479 (6%)

Query: 49  RAGKFDESLYFIESMVANG---CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEP 104
           ++G+ D+ L     M+A G   C P+VV    +I  FF+E   NKA  +  E++++   P
Sbjct: 197 KSGQADDLL----RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D+  YN+++   CKA  ++ A   L ++ ++   P+  TYN +I    S G  + A +VF
Sbjct: 253 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF---VRSLE 221
            ++ R +  P V+T ++L+ +    G+  +A  + D M M  KG     F +   +    
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM--KGQNPDVFSYNIMLNGYA 370

Query: 222 SRGC----------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++GC                 PD  ++N+L++   N G  ++   +  EM   G++P+VV
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  +I++LCR GK +DA++      ++G+ PD Y+Y+ LI  +C  G L  A E +  +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 490

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +++G   DIV +++I+   CK G    A  IF+   +VG  P+   Y+ +       G  
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 550

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +AL +   M+S GIEP+ + Y +L++  C+ G +DE + L  +M     +P+ I Y+II
Sbjct: 551 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           I G  +  R   +      M E G   +  TY +++ G+       EA+ L   L +M+
Sbjct: 611 IDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 233/460 (50%), Gaps = 26/460 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + + +L F   ++  G + ++++   L++ F + +++++A+ ++  L +  E    P
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL--LHRTPELGCVP 180

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFK 162
           DVF+Y+ L+   C   +   A+ +L  +   G   SP+VV YN +I      G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 240

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F ++++    P ++TY  ++ A                  +CK   + +A  F+R + +
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHA------------------LCKARAMDKAEAFLRQMVN 282

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +   P+  +YN L+    + G+W+E  ++  EM    + P+VVT S+L+ SLC+ GK ++
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A DV      KG  PD +SY+ +++ Y   G L    +  D M+ DG  PD   +N ++ 
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A+   G  D+A+ IF ++ D G  P+V +Y T+ +AL   G    A+   ++M+ +G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D+  YN LI   C  G + +A  L+ ++ +      ++ ++ II   CK  R+ ++  + 
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
                 G  P+   Y +L++G    G   +A+ + +A+VS
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 218/441 (49%), Gaps = 18/441 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M  +   PDVV  + L+    +  K  +A  V + +   G+ PDVF+Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +++G+     +     + D +   G +PD  T+N++I +  + GM++ A  +F+++  
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
              KP V+TY  +I A    G+ D AM+  ++M                 G C  G + +
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 482

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A + +  + + G   D++ ++ ++  L  +G+  + + +    ++ GL P+ V YS+L+ 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  GK E A+ V  A    G+ P+   Y  L++ YCK GR+D  +     M+  G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
             + Y+ I+    + G    A   F ++++ G   ++ +YN +   L+ +     A+ + 
Sbjct: 603 STILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 662

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+ +  ++ + IT N++I  + +   V+EA  L   +  +R  P+V++Y+I+I    K 
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722

Query: 453 RRINESIEVLAAMFEKGCKPN 473
             + E+ ++ ++M   GC+PN
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPN 743



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 196/409 (47%), Gaps = 23/409 (5%)

Query: 119 ANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           A  + L N+   R +  R  SP   TY I++         E A   F QLLR   +  +I
Sbjct: 88  ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNII 147

Query: 178 TYTILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRS 219
               L++      +TD+A+ +L     E+G              +C +G  GQA   +R 
Sbjct: 148 IANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM 207

Query: 220 LESRG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           +   G  C P+V++YN ++      G   +   L  EM+ RG+ P++VTY+ ++ +LC+ 
Sbjct: 208 MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA 267

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              + A   LR    K + P+ ++Y+ LI  Y   G+   A+     M     LPD+V  
Sbjct: 268 RAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 327

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + ++ + CK G   +A ++F+ ++  G  P+V SYN M +   + G  +    +   ML 
Sbjct: 328 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI PD  T+N LI      GM+D+A+ +  +M     +P V++Y  +I   C+  ++++
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS--MH 504
           ++E    M ++G  P++  Y  LI+G    G   +A EL + +++  MH
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 202/452 (44%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+    ++M   G  PDV     ++  +  +        + +++   G  PD +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI  +     ++ A  + + +R  G  PDVVTY  +I +LC  G ++ A + F+Q+
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +     P    Y  LIQ     G   KA +L+ E+                  +CK G V
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A        + G  PD + Y+ML+     +GK E+  ++   M+S G+EPNVV Y  L
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C+ G+ ++ + + R   ++G+ P    Y  +I    + GR   A      M   G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  YN +L    KN   D+A+ +F++L  +    N+ + NTM   ++ +     A  
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + +    + P  +TY+ +I+ L ++G+V+EA  +   M++    P     N ++    
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 755

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K   I  +   L+ + E+       T +LL++
Sbjct: 756 KKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 195/429 (45%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LIK     G  D+++     M  +G KPDVV    +I    +  K + A+ +  +++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   PD +AYN LI GFC    +  A +++  + + G   D+V ++ +I +LC  G + 
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +FD  +     P  + Y++L+    L G+ +KA+++ D M                
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM---------------- 560

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S G +P+V+ Y  L+     +G+ +EG  L  EM+ RG++P+ + YSI+I  L + G
Sbjct: 561 --VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T  A        E G+  D  +Y+ ++    K+   D AI     + +     +I+  N
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++    +    ++A ++F  +S     P+V +Y+ M + L   G    A  M S M + 
Sbjct: 679 TMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G EP+    N ++  L +   +  A   L  ++   F    ++  +++  F       E 
Sbjct: 739 GCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREH 798

Query: 459 IEVLAAMFE 467
           I  L A + 
Sbjct: 799 IRFLPAKYH 807



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 51/318 (16%)

Query: 244 KWEEGEKLMTEMISRG---LEPNVVTYSILI-----SSLCRDGKTEDAVDVLRAAKE--- 292
           + EE   L+ E+  RG   LE ++  +   +     S+ CR G         RAA     
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 103

Query: 293 -KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + L+P +++Y  L+    +  R +LA+ F   ++  G   +I+  N +L  FC+    D
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 163

Query: 352 QALEI--------------------FEKLSDVG------------------CPPNVSSYN 373
           +AL+I                     + L D G                  C PNV +YN
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+    +  GD  +A  +  EM+ +GI PD +TYNS++  LC+   +D+A   L  M + 
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R  P   +YN +I G+  T +  E++ V   M      P+  T  +L+  +   G   EA
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 494 MELANALVSMHAISRDTF 511
            ++ + + +M   + D F
Sbjct: 344 RDVFDTM-AMKGQNPDVF 360


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 233/480 (48%), Gaps = 19/480 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G   + +  +E M + G +P++   T  I+   + R+ + A  + + ++  G  PDV 
Sbjct: 247 RRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVI 306

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI   C A +++ A ++  ++R+   SPD VTY  ++      G +E+  + ++++
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             D   P V+TYTILI+A    G  D+A  +LD M                 G+ K   +
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL 426

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + + ++ES G +P   SY + +      G   +       M  RG+ P++   +  
Sbjct: 427 DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + +L   G+  +A D+     + GL+PD+ +Y+ L+  Y K G++D A + L  MIS GC
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD++  N+++    K G  D A ++F +L ++   P V +YN + + L   G  ++AL 
Sbjct: 547 EPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALE 606

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +   M   G  P+ IT+NSL+ CL ++  VD A+ +   M      P V++YN II G  
Sbjct: 607 LFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI 666

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           +  RI+ +      M +K   P+  T   LI G+   G   +A+++    V    +  ++
Sbjct: 667 REGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNS 725



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 220/427 (51%), Gaps = 22/427 (5%)

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           N+A++V + +   G +P +  Y+AL+    +         +L+ ++S G  P++ TY I 
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG---- 203
           I +L     I+ A+ +F ++  + C P VITYT+LI A    G+ DKA +L  +M     
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 204 ----------MCKKGMVGQ---AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                     M K G VG      +F   +E  G  PDV++Y +L+  L   G  +    
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++  M ++G+ PN+ TY+ +I  L +  + ++A+++L   +  G+ P A+SY   I  Y 
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K G    AI+  + M   G +P I   N  L    + G   +A +IF  L   G  P+  
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YN +      +G   +A  ++SEM+SKG EPD +  NSLI+ L + G VD A  +   +
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           ++ +  PTV++YNI++ G  K  +I +++E+  +M E GC PN  T+  L++ +     +
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLS----K 632

Query: 491 AEAMELA 497
            +A++LA
Sbjct: 633 NDAVDLA 639



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/564 (24%), Positives = 248/564 (43%), Gaps = 89/564 (15%)

Query: 14   ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
            E  R+S + +   + H          +  L+K   +AG+ D++   +  M++ GC+PDV+
Sbjct: 492  ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVM 551

Query: 74   MCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRL 132
            +   LI   ++  + + A ++   L+     P V  YN L++G  K  +I  A ++   +
Sbjct: 552  IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSM 611

Query: 133  RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
               G  P+ +T+N ++  L     ++ A K+F ++   NC P V+TY  +I   + EG+ 
Sbjct: 612  TESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI 671

Query: 193  DKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESRGC-QPDVISYNML 235
            D A     +M                G+ + G V  A + V     + C Q +   +  L
Sbjct: 672  DYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGEL 731

Query: 236  LRTLLNMGKWEEG---------------EKLMTEMI---------------------SRG 259
            +  +L   + EE                + +M  +I                     + G
Sbjct: 732  MECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG 791

Query: 260  LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            + P + +Y+ L+  L     TE A+++    K  G  P+ ++Y+ L+ A+ K  R++   
Sbjct: 792  IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLY 851

Query: 320  EFLDYMISDGCLPDIVNYNTILAAFCKN-------------------------------- 347
            +    M S GC P+ + +N I++A  K+                                
Sbjct: 852  DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGL 911

Query: 348  ---GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
               G ++QA++IFE++ D GC PN   YN + +    SG+   A  +  +M+ +GI PD 
Sbjct: 912  LKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDL 971

Query: 405  ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             +Y  L+ CLC  G +DEAV    +++ T   P  +SYN II G  K+RR++E++ + + 
Sbjct: 972  KSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031

Query: 465  MFEKGCKPNETTYVLLIEGIGYGG 488
            M  +G  P+  TY  LI  +G  G
Sbjct: 1032 MKNRGISPDLYTYNALILHLGIAG 1055



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 204/441 (46%), Gaps = 21/441 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            LI    R G+ ++++  +   V   C + +     +L++    E +  +A+   EIL   
Sbjct: 695  LIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCN 754

Query: 102  GE-PDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIES 159
                D      LI   CK  +   A  V D+  ++ G  P + +YN ++  L      E 
Sbjct: 755  SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814

Query: 160  AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
            A ++F+ +      P   TY +L+ A    G++ +  KL D                   
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDA---HGKSKRINKLYD---------------LYSE 856

Query: 220  LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            + SRGC+P+ I++N+++  L+      +   L  E++S    P   TY  LI  L + G+
Sbjct: 857  MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916

Query: 280  TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +E A+ +     + G  P++  Y+ LI+ + K G +D A E    M+ +G  PD+ +Y  
Sbjct: 917  SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976

Query: 340  ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
            ++   C  G  D+A++ FE+L   G  P+  SYN + + L  S     AL + SEM ++G
Sbjct: 977  LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036

Query: 400  IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            I PD  TYN+LI  L   G VD AV +  +++     P+V +YN +I G   +   +++ 
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096

Query: 460  EVLAAMFEKGCKPNETTYVLL 480
             V   M   GC PN  T+  L
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQL 1117



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 205/454 (45%), Gaps = 21/454 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK D++      M A+   PD V    L+ KF +        R    +E  G  PDV  
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI   CK+  ++ A  +LD + ++G  P++ TYN MI  L     ++ A ++ + + 
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               KPT  +Y + I                D  G  K G   +A     +++ RG  P 
Sbjct: 438 SLGVKPTAFSYVLFI----------------DYYG--KSGDPAKAIDTFETMKKRGIMPS 479

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + + N  L TL   G+  E E +  ++   GL P+ VTY++L+    + G+ + A  +L 
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               KG  PD    + LI+   K GR+D A +    + +    P +V YN +L    K G
Sbjct: 540 EMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEG 599

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +ALE+F  +++ GCPPN  ++N++   L  +     AL M   M      PD +TYN
Sbjct: 600 KILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYN 659

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++I  L R+G +D A      M+     P  ++   +I G  +  R+ ++I+V+     +
Sbjct: 660 TIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQ 718

Query: 469 GC-KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            C + N   +  L+E I       EA+  A  LV
Sbjct: 719 ACLQTNSQFWGELMECILTEAEIEEAISFAEILV 752



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 237/527 (44%), Gaps = 57/527 (10%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            + GK  ++L    SM  +GC P+ +    L+    +    + A+++   +      PDV 
Sbjct: 597  KEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVL 656

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN +I G  +  +I+ A     +++ +  SPD VT   +I  +   G +E A KV  + 
Sbjct: 657  TYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEF 715

Query: 168  LRDNCKPTVITY------TILIQATMLEG-------------QTDKAM-----------K 197
            +   C  T   +       IL +A + E              Q D  M           K
Sbjct: 716  VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKK 775

Query: 198  LLDEMGMCKK-------------------GMVG-----QAFQFVRSLESRGCQPDVISYN 233
             LD   +  K                   G++G     +A +    ++S G  P+  +YN
Sbjct: 776  ALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYN 835

Query: 234  MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            +LL       +  +   L +EM SRG EPN +T++I+IS+L +      A+D+       
Sbjct: 836  LLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG 895

Query: 294  GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
              +P   +Y PLI    K GR + A++  + M+  GC P+ V YN ++  F K+G  D A
Sbjct: 896  DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955

Query: 354  LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             E+F+K+   G  P++ SY  +   L  +G    A+    E+   G++PD ++YN +I+ 
Sbjct: 956  CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015

Query: 414  LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            L +   +DEA+ L  +M++    P + +YN +IL      +++ ++++   +   G +P+
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075

Query: 474  ETTYVLLIEGIGYGGWRAEAMELANALVSMH-AISRDTFKRLNRTFP 519
              TY  LI G    G + +A  +   ++ +  + + +TF +L   +P
Sbjct: 1076 VFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYP 1122



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 21/395 (5%)

Query: 51   GKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YG-EPDVF 107
             + +E++ F E +V N  C+ D VM   LIK   + +K+  A  V +   K  G  P + 
Sbjct: 739  AEIEEAISFAEILVCNSVCQDDHVML-PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLE 797

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +YN L+ G   +N  E A ++ + ++S G  P+  TYN+++ +      I   + ++ ++
Sbjct: 798  SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                C+P  IT+ I+I A +     +KA+ L  E+                 G+ K G  
Sbjct: 858  RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             QA +    +   GC P+ + YN+L+      G+ +   +L  +M+  G+ P++ +Y+IL
Sbjct: 918  EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977

Query: 271  ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
            +  LC  G+ ++AV      K  GL PD  SY+ +I+   K  RLD A+     M + G 
Sbjct: 978  VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037

Query: 331  LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             PD+  YN ++      G  D A++++E+L  VG  P+V +YN +      SG+K +A  
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 391  MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            +  +M+  G  P+  T+  L +   R G+V    G
Sbjct: 1098 VFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFG 1132



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 205/429 (47%), Gaps = 20/429 (4%)

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           C  +++   ++R+    V V ++++K     ++  Y  +         I  A   L ++ 
Sbjct: 134 CNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMT 193

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             GF  +  +YN +I  L   G    A KV+ +++ +  KP++ TY+ L+ A    G T 
Sbjct: 194 EVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTR 252

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
           K M LL+EM                  +S G +P++ +Y + +R L    + ++   +  
Sbjct: 253 KIMNLLEEM------------------KSIGLRPNIYTYTICIRALGRARRIDDAWGIFK 294

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM   G  P+V+TY++LI +LC  GK + A ++    +    +PD  +Y  L+  + K G
Sbjct: 295 EMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVG 354

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            L+    F + M  DG  PD+V Y  ++ A CK+G+ D+A ++ + ++  G  PN+ +YN
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           TM   L  +     AL ++  M S G++P   +Y   I    + G   +A+     M+  
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P++ + N  +    +T RI+E+ ++   + + G  P+  TY +L++     G   +A
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKA 534

Query: 494 MELANALVS 502
            +L + ++S
Sbjct: 535 TQLLSEMIS 543



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 192/416 (46%), Gaps = 42/416 (10%)

Query: 85  ERKSNKAV----RVMEILEKYGEPD-VFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
           +RK NK       VM IL+   +P+  F+Y  ++S        +L N V         + 
Sbjct: 88  KRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVS--------QLTNFV--------HTT 131

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D   Y  M+  L  +  IE    VFD + +      + TY  + +A  +           
Sbjct: 132 DACNY--MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSI----------- 178

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                  KG +G+A   +R +   G   +  SYN L+  LL  G   E  K+   MIS G
Sbjct: 179 -------KGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEG 230

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++P++ TYS L+ +L R G T   +++L   K  GL P+ Y+Y   I A  +  R+D A 
Sbjct: 231 MKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAW 290

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
                M  +GC PD++ Y  ++ A C  G  D+A E++ K+      P+  +Y T+    
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD        +EM   G  PD +TY  LI  LC+ G VD A  +L  M +    P +
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            +YN +I G  K RR++E++E+L  M   G KP   +YVL I+  G  G  A+A++
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAID 466



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 1/146 (0%)

Query: 17   RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
            R+  + +      L   D     +  +I    ++ + DE+L     M   G  PD+    
Sbjct: 986  RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYN 1045

Query: 77   KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             LI       K + AV++ E L+  G EP VF YNALI G   +   + A  V  ++   
Sbjct: 1046 ALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVV 1105

Query: 136  GFSPDVVTYNIMIGSLCSRGMIESAF 161
            G SP+  T+  +       G++ + F
Sbjct: 1106 GCSPNTETFAQLPNKYPRAGLVHNPF 1131


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 215/438 (49%), Gaps = 25/438 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R GK  E+   +  M      PDVV  + +I  +    +  KA+++M+ ++  G +P+ +
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRY 329

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I   CK  +   A KVL  + S+   PD V Y  +I      G + +A K FD++
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L     P  ITYT LIQ     G+  +   L  EM                   SRG +P
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM------------------ISRGLKP 431

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D ++Y  L+      G+      L  EM+  G+ PN+VTY  LI  LC+ G+ + A ++L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++KGL  +   Y+ +++  CK G ++ AI+ +  M   G  PD + Y T++ A+C+ 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIRALGMISEMLSKGIEPDE 404
           G+ D+A ++ +++ D G  P V ++N + +     G   D  R LG    ML KGI PD 
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW---MLEKGIVPDA 608

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           ITYN+L+   C    ++    +   M +    P   +YNI+I G CK R + E+  +   
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 465 MFEKGCKPNETTYVLLIE 482
           M EKG  P  T+Y  LI+
Sbjct: 669 MIEKGYVPTVTSYNALIK 686



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 198/390 (50%), Gaps = 18/390 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +M++  +   PDV +Y+ +I G+C   +++ A K++D ++ +G  P+  TYN +I  LC 
Sbjct: 281 LMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCK 340

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G    A KV  +++     P  + YT LI      G    A K  DEM           
Sbjct: 341 IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM----------- 389

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   S+   PD I+Y  L++     GK  E + L  EMISRGL+P+ VTY+ LI  
Sbjct: 390 -------LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+ G+  +A  +     + G+TP+  +Y  LI   CK G LD A E LD M   G   +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN+++   CK GN +QA+++ +++   G  P+  +Y T+  A    GD  +A  ++ 
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EML +G++P  +T+N L++  C  GM+++   LL  M      P  I+YN ++   C   
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +N + ++   M  +G  P+  TY +LI+G
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 218/468 (46%), Gaps = 56/468 (11%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILE------KYGEPDVFAYNALISGFCKANQIEL 124
           D+ +  +L+  +F   K    V++ +         KY  P+  A++       +   +  
Sbjct: 149 DLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSE 208

Query: 125 ANKVLDRLRSRGF---------------------------------SPDVVTYNIMIGSL 151
           A K+LD+L S G                                  S +  +YNI+I SL
Sbjct: 209 ARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSL 268

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------- 203
           C  G ++ A ++  Q+   +  P V++Y+ +I      G+  KA+KL+D+M         
Sbjct: 269 CRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 204 ---------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                    +CK G   +A + +R + S+   PD + Y  L+     +G      K   E
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+S+ + P+ +TY+ LI    + GK  +  ++      +GL PD  +Y  LI  YCK G 
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A    + M+  G  P+IV Y  ++   CK+G  D A E+ +++   G   NV  YN+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           M + +  +G+  +A+ ++ EM   GI+PD ITY ++I   CR G +D+A  LL +M    
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            +PTV+++N+++ GFC    + +   +L  M EKG  P+  TY  L++
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 190/398 (47%), Gaps = 22/398 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF---QERKSNKAVRVMEILEKYGEPD 105
           + GK  E+   +  M++    PD V+ T LI  FF     R +NK     E+L K   PD
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD--EMLSKKISPD 397

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              Y  LI GF +  ++     +   + SRG  PD VTY  +I   C  G + +AF + +
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++++    P ++TY  LI      G+ D A +LLDEM                 G+CK G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + QA + ++ +E  G  PD I+Y  ++     +G  ++  KL+ EM+ RGL+P VVT++
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFN 577

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L++  C  G  ED   +L    EKG+ PDA +Y+ L+  +C    ++   +    M + 
Sbjct: 578 VLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD   YN ++   CK  N  +A  +++++ + G  P V+SYN +    +       A
Sbjct: 638 GVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEA 697

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
             +  EM   G+  D   YN  +     +G V+  + L
Sbjct: 698 RELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 19/360 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   + GK  E       M++ G KPD V  T LI  + +  +   A  +   + 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P++  Y ALI G CK  +++ AN++LD +R +G   +V  YN M+  +C  G IE
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+  ++      P  ITYT +I A    G  DKA KLL EM                
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM---------------- 564

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               RG QP V+++N+L+     +G  E+G++L+  M+ +G+ P+ +TY+ L+   C   
Sbjct: 565 --LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
                  + +  + +G+ PD+ +Y+ LI  +CK   L  A      MI  G +P + +YN
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  F K     +A E+FE++   G   +   YN      +  GD    L +  E + K
Sbjct: 683 ALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 166/338 (49%), Gaps = 15/338 (4%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAF------------QFVR 218
           P  I + I  Q  +  G   +A KLLD++   G+        AF              ++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G   +  SYN+++ +L  +GK +E  +L+ +M  R   P+VV+YS +I   C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+ ++   + KGL P+ Y+Y+ +I   CK G+   A + L  M+S   +PD V Y 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  F K G+   A + F+++      P+  +Y T+       G  I    +  EM+S+
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PDE+TY +LI   C+ G +  A  L  +M      P +++Y  +I G CK   ++ +
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+L  M +KG + N   Y  ++ GI   G   +A++L
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 7/335 (2%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG-QAFQFVRSL--ESRGCQPDV 229
           +P++    I+I   ++      A +L+ +  +  K  +G +  QF   L    +   P+ 
Sbjct: 131 EPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNP 190

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV-LR 288
           I++++  + L+ +G   E  KL+ +++S GL   VVT     + L R     + +++ ++
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G++ +  SY+ +I + C+ G++  A   L  M      PD+V+Y+T++  +C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +AL++ + +   G  PN  +YN++   L   G    A  ++ EM+S+ I PD + Y 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI    + G V  A     +M S +  P  I+Y  +I GF +  ++ E   +   M  +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           G KP+E TY  LI+     G    A  L N +V M
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 18/265 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ D +   ++ M   G + +V +   ++    +     +A+++M+ +E  G +PD  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  +I  +C+   I+ A+K+L  +  RG  P VVT+N+++   C  GM+E   ++   +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L     P  ITY  L++   +    +   K+   M                 G CK   +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A+   + +  +G  P V SYN L++      K+ E  +L  EM   GL  +   Y+  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGL 295
           +     +G  E  +++   A EK L
Sbjct: 720 VDMCYEEGDVEITLNLCDEAIEKCL 744


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 218/454 (48%), Gaps = 7/454 (1%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GKF+++   I  M+ NG  PD    +++I       +   A  + + ++  G  PDV+ Y
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  F KA  I+ A+  LD +   G  P VVTY  +I +      +  A ++F+ ++ 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESRGCQPD 228
             C P VITYT LI      G  +KA ++   M G      V   F+   ++  +   P+
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK---PN 644

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  L+  L    K ++   L+  M   G EPN + Y  LI   C+  K ++A +V  
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E+G  P+ Y+Y  LI    KD RLDL ++ L  M+ + C P+IV Y  ++    K  
Sbjct: 705 KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A ++   + + GC PNV +Y  M      +G   + L +  EM SKG  P+ +TY 
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G +DEA  LL +M+ T +   V SY  +I G+   R    S+ +L  + + 
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKN 882

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  P    Y +LI+     G    A+EL   ++S
Sbjct: 883 GSAPTILLYKVLIDNFVKAGRLEVALELHKEVIS 916



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 240/565 (42%), Gaps = 84/565 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C   K  E + +    +  PNT L         + K+I     A  F+E++ F+  M + 
Sbjct: 287 CKVGKWREALSLIEKEDFVPNTIL---------YNKMISGLCEASFFEEAMDFLNRMRST 337

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            C P+V     L+     +++  +  R++ ++   G  P    +N+L+  +CK++    A
Sbjct: 338 SCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA 397

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI---------------------------- 157
            K+L ++      P  V YNI+IGS+CS G +                            
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457

Query: 158 -------------ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
                        E A+KV  +++ +   P   TY+ +I       + + A  L  EM  
Sbjct: 458 VSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                             K G++ QA  ++  +   GC+P V++Y  L+   L   K   
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD--------- 298
             +L   MI++G  PNV+TY+ LI   C+ G  E A  +    +     PD         
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637

Query: 299 -------AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
                    +Y  L+   CK  ++  A + L+ M  DGC P+ + Y+ ++  FCK    D
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+F K+ + G  PNV +Y+++   L+        L ++S+ML     P+ + Y  +I
Sbjct: 698 EAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             L +    DEA  L++ ME    +P V++Y  +I GF K  ++++ +E+   M  KGC 
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 817

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           PN  TY +LI      G   EA  L
Sbjct: 818 PNFVTYTVLINHCCATGHLDEAYAL 842



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 213/499 (42%), Gaps = 43/499 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI++  R G ++ +L  +  +   G KP  +    L++ F +  K + A  V   + + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D F         CK  +   A   L  +    F P+ + YN MI  LC     E A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
              +++   +C P V TY IL+   + + Q  +  ++L  M                   
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK------WEEGEKLMTEMISR 258
           CK      A++ ++ +E   C+P  + YN+L+ ++ + G+      +E  EK   EM+S 
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G   N V        LC  GK E A  V+      G  PD  +Y  +I   C   R++ A
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENA 508

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 M   G +PD+  Y  ++  F K G   QA    +++   GC P V +Y T+  A
Sbjct: 509 FFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHA 568

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL----------- 427
              +     A  +   M++KG  P+ ITY +LI   C+ G +++A  +            
Sbjct: 569 YLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628

Query: 428 VDM-----ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           VDM      +   +P V++Y  ++ G CK  ++ ++ ++L  MF  GC+PN   Y  LI+
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688

Query: 483 GIGYGGWRAEAMELANALV 501
           G        EA E+ + +V
Sbjct: 689 GFCKAAKLDEAQEVFHKMV 707



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 201/425 (47%), Gaps = 42/425 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV----- 94
           +  LI    +A K   +    E M+A GC P+V+  T LI  + +     KA ++     
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 95  -----------MEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                       +I     E P+V  Y AL+ G CKA++++ A  +L+ +   G  P+ +
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I   C    ++ A +VF +++     P V TY+ LI     + + D  +K+L +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ K     +A++ +  +E +GC+P+V++Y  ++      GK 
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++  +L  EM S+G  PN VTY++LI+  C  G  ++A  +L   K+        SY  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  Y ++  L L +  L+ +  +G  P I+ Y  ++  F K G  + ALE+ +++  +  
Sbjct: 862 IEGYKREFILSLGL--LEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEV--ISA 917

Query: 366 PPNVSSYNTMFSAL---WSSGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             ++++   ++++L   +S   KI  A  +  +M+  G+ PD  T+  L+  L R    +
Sbjct: 918 SMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWE 977

Query: 422 EAVGL 426
           EA+ L
Sbjct: 978 EALQL 982



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 20/399 (5%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+     +A + L RL+  G+ P  +TYN ++        +++A  V  ++  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE--------------MGMCKKGMVGQAFQ 215
                   T     QA    G+  +A+ L+++               G+C+     +A  
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  + S  C P+V +Y +LL   LN  +    +++++ MI+ G  P+   ++ L+ + C
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL------DLAIEFLDYMISDG 329
           +      A  +L+  ++    P    Y+ LI + C  G L      +LA +  + M+S G
Sbjct: 390 KSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAG 449

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            + + VN  +     C  G  ++A ++  ++   G  P+ S+Y+ +   L ++     A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM   G+ PD  TY  LI C  + G++ +A   L +M      PTV++Y  +I  +
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            K ++++ + E+   M  KGC PN  TY  LI+G    G
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 56/361 (15%)

Query: 54  DESLYF-IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
           D  +YF I++ VA   KP+VV    L+    +  K   A  ++E +   G EP+   Y+A
Sbjct: 628 DVDMYFKIKNNVAE--KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI GFCKA +++ A +V  ++  RG++P+V TY+ +I  L     ++   KV  ++L ++
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           C P ++ YT +I       +TD+A KL+  M                 G  K G V +  
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM------------------- 255
           +  R + S+GC P+ ++Y +L+      G  +E   L+ EM                   
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY 865

Query: 256 -----ISRGL---------EPNVVTYSILISSLCRDGKTEDAVDVLRA--AKEKGLTPDA 299
                +S GL          P ++ Y +LI +  + G+ E A+++ +   +    +T   
Sbjct: 866 KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKK 925

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
             Y  LI ++    ++D A E    MI DG +PD+  +  +L    +    ++AL++ + 
Sbjct: 926 NLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDS 985

Query: 360 L 360
           L
Sbjct: 986 L 986



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 7/238 (2%)

Query: 215 QFVRSLESRGCQPDVIS--YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           +F+R  E RG   +V+    N+L+R     G W    + +  +   G +P  +TY+ L+ 
Sbjct: 192 EFLR--EIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              R  K + A  V R   E GL+ D ++      A CK G+   A+  ++    +  +P
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVP 306

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           + + YN +++  C+    ++A++   ++    C PNV +Y  +     +     R   ++
Sbjct: 307 NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL 366

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           S M+++G  P    +NSL+   C+      A  LL  ME    +P  + YNI+I   C
Sbjct: 367 SMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 214/468 (45%), Gaps = 56/468 (11%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP---DVFAYNALISGFCKANQIE 123
           GCKPD+   T L+K    ++ S +A+ ++ I+  +      DV AY  +I+G  +  Q++
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 224

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  + D +  RG SPDVVTY+ +I +L     ++ A +VF +++++   P  I YT L+
Sbjct: 225 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 284

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G C  G   +A    + +   G +PDV++Y  L+  L   G
Sbjct: 285 H------------------GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 326

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K  E  K+   ++ RG +P+  TY  L+     +G   +  D+L    +KG+    + ++
Sbjct: 327 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 386

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++ AY K  ++D A+     M   G  PDIVNY T+L   C  G  D AL  F  L   
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 446

Query: 364 GCPPNVSSYNTMFSAL-----W------------------------------SSGDKIRA 388
           G  PN+  + T+   L     W                                G  I A
Sbjct: 447 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 506

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   M+  GIEP+  TYN+LI   C DG +DEA+ LL  M     +P+ ++YN II G
Sbjct: 507 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 566

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +  RI + + +L  M  KG  P   TY +L++G+   G    A EL
Sbjct: 567 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 205/429 (47%), Gaps = 19/429 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    R G+ D++    ++M+  G  PDVV  + +I    + +  +KA +V   + 
Sbjct: 210 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 269

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD   Y +L+ G+C + + + A  +  ++   G  PDVVTY  ++  LC  G   
Sbjct: 270 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 329

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+FD L++   KP   TY  L+     EG   +   LLD M   KKGM  Q    + 
Sbjct: 330 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM--MKKGM--QLGHHI- 384

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                        +NM++       K +E   + + M  +GL P++V Y  ++  LC  G
Sbjct: 385 -------------FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 431

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + +DA+    + K +GL P+   +  LI   C   + D   E    MI  G   D + +N
Sbjct: 432 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 491

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+   CK G   +A  +F+ +  +G  PN ++YNT+       G    A+ ++  M+  
Sbjct: 492 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 551

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++P ++TYN++I+   ++G +++ + LL +M+     P +++Y +++ G  +  R   +
Sbjct: 552 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAA 611

Query: 459 IEVLAAMFE 467
            E+   M +
Sbjct: 612 KELYLRMIK 620



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 220/457 (48%), Gaps = 22/457 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYG-EPDV 106
           R G+ D +   +  ++  G +   ++ + L+K     R+++ A+  V+  + + G +PD+
Sbjct: 111 RLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDL 170

Query: 107 FAYNALISGFCKANQIELANKVLDRLR-SRGFSP-DVVTYNIMIGSLCSRGMIESAFKVF 164
           F+Y  L+ G C     + A  +L  +   +G  P DVV Y  +I  L   G ++ A+ +F
Sbjct: 171 FSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLF 230

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D +L     P V+TY+ +I A       DKA ++                 F R +++ G
Sbjct: 231 DAMLDRGPSPDVVTYSSIISALSKTQAMDKATQV-----------------FTRMVKN-G 272

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PD I Y  L+    + GK +E   +  +M   G+EP+VVTY+ L+  LC++GK+ +A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +  +  ++G  PD+ +Y  L+  Y  +G L    + LD M+  G       +N I+ A+
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K+   D+AL +F  +   G  P++ +Y T+   L ++G    AL   + + S+G+ P+ 
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           + + +LI  LC     D+   L  +M         I +N I+   CK  R+ E+  +   
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M   G +PN  TY  LI+G    G   EAM+L   +V
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV 549



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 193/418 (46%), Gaps = 25/418 (5%)

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKAN---QIELANKVLDRLRSRGFSPDVVTYNI 146
           A +V + L K G+   +F  N  +S   +A+    I L N+ + R  +   +P++ TY I
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAISLFNR-MPRAGATSAAPNIATYGI 104

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL-LDEM--- 202
           +IG     G ++ AF    +++    + + I ++ L++      +T  AM + L  M   
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPEL 164

Query: 203 --------------GMCKKGMVGQAFQFVRSL-ESRG-CQPDVISYNMLLRTLLNMGKWE 246
                         G+C      QA   +  + + +G C  DV++Y  ++  LL  G+ +
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 224

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +   L   M+ RG  P+VVTYS +IS+L +    + A  V     + G+ PD   Y  L+
Sbjct: 225 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 284

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             YC  G+   AI     M   G  PD+V Y  ++   CKNG + +A +IF+ L   G  
Sbjct: 285 HGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHK 344

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+ ++Y T+     + G  +    ++  M+ KG++     +N ++    +   VDEA+ +
Sbjct: 345 PDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLV 404

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             +M      P +++Y  ++   C   R+++++    ++  +G  PN   +  LI G+
Sbjct: 405 FSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 462



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 13/281 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P++ +Y +++     +G+ +     +  +I+ GL  + + +S L+  LC   +T DA+D 
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYNTILAA 343
           VLR   E G  PD +SY  L+   C D     A++ L  M      C  D+V Y T++  
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             + G  D+A  +F+ + D G  P+V +Y+++ SAL  +    +A  + + M+  G+ PD
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I Y SL+   C  G   EA+G+   M      P V++Y  ++   CK  +  E+ ++  
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           ++ ++G KP+ TTY  L+ G    G          ALV MH
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEG----------ALVEMH 367


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 215/438 (49%), Gaps = 25/438 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R GK  E+   +  M      PDVV  + +I  +    +  KA+++M+ ++  G +P+ +
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRY 329

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I   CK  +   A KVL  + S+   PD V Y  +I      G + +A K FD++
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L     P  ITYT LIQ     G+  +   L  EM                   SRG +P
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM------------------ISRGLKP 431

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D ++Y  L+      G+      L  EM+  G+ PN+VTY  LI  LC+ G+ + A ++L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              ++KGL  +   Y+ +++  CK G ++ AI+ +  M   G  PD + Y T++ A+C+ 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG---DKIRALGMISEMLSKGIEPDE 404
           G+ D+A ++ +++ D G  P V ++N + +     G   D  R LG    ML KGI PD 
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW---MLEKGIVPDA 608

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           ITYN+L+   C    ++    +   M +    P   +YNI+I G CK R + E+  +   
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 465 MFEKGCKPNETTYVLLIE 482
           M EKG  P  T+Y  LI+
Sbjct: 669 MIEKGYVPTVTSYNALIK 686



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 198/390 (50%), Gaps = 18/390 (4%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +M++  +   PDV +Y+ +I G+C   +++ A K++D ++ +G  P+  TYN +I  LC 
Sbjct: 281 LMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCK 340

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G    A KV  +++     P  + YT LI      G    A K  DEM           
Sbjct: 341 IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM----------- 389

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   S+   PD I+Y  L++     GK  E + L  EMISRGL+P+ VTY+ LI  
Sbjct: 390 -------LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+ G+  +A  +     + G+TP+  +Y  LI   CK G LD A E LD M   G   +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN+++   CK GN +QA+++ +++   G  P+  +Y T+  A    GD  +A  ++ 
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EML +G++P  +T+N L++  C  GM+++   LL  M      P  I+YN ++   C   
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +N + ++   M  +G  P+  TY +LI+G
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 21/433 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   E+   ++ +++ G    V  C   + +      S      +++  +YG   +  +Y
Sbjct: 204 GHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI--ANNSEGIEMAIKVFCEYGISWNTTSY 261

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I   C+  +++ A+++L ++  R  +PDVV+Y+ +I   C  G ++ A K+ D +  
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
              KP   TY  +I                  + +CK G   +A + +R + S+   PD 
Sbjct: 322 KGLKPNRYTYNSII------------------LLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + Y  L+     +G      K   EM+S+ + P+ +TY+ LI    + GK  +  ++   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              +GL PD  +Y  LI  YCK G +  A    + M+  G  P+IV Y  ++   CK+G 
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A E+ +++   G   NV  YN+M + +  +G+  +A+ ++ EM   GI+PD ITY +
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   CR G +D+A  LL +M     +PTV+++N+++ GFC    + +   +L  M EKG
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 470 CKPNETTYVLLIE 482
             P+  TY  L++
Sbjct: 604 IVPDAITYNTLMK 616



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 191/398 (47%), Gaps = 22/398 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF---QERKSNKAVRVMEILEKYGEPD 105
           + GK  E+   +  M++    PD V+ T LI  FF     R +NK     E+L K   PD
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD--EMLSKKISPD 397

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              Y  LI GF +  ++     +   + SRG  PD VTY  +I   C  G + +AF + +
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++++    P ++TY  LI      G+ D A +LLDEM                 G+CK G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + QA + ++ +E  G  PD I+Y  ++     +G  ++  KL+ EM+ RGL+P VVT++
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFN 577

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L++  C  G  ED   +L    EKG+ PDA +Y+ L+  +C    ++   +    M + 
Sbjct: 578 VLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD   YN ++   CK  N  +A  +++++ + G  P V+SYN +    +     + A
Sbjct: 638 GVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEA 697

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
             +  EM   G+  D   YN  +     +G V+  + L
Sbjct: 698 RELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 19/360 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   + GK  E       M++ G KPD V  T LI  + +  +   A  +   + 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P++  Y ALI G CK  +++ AN++LD +R +G   +V  YN M+  +C  G IE
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+  ++      P  ITYT +I A    G  DKA KLL EM                
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM---------------- 564

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               RG QP V+++N+L+     +G  E+G++L+  M+ +G+ P+ +TY+ L+   C   
Sbjct: 565 --LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
                  + +  + +G+ PD+ +Y+ LI  +CK   L  A      MI  G +P + +YN
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  F K     +A E+FE++   G   +   YN      +  GD    L +  E + K
Sbjct: 683 ALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 166/338 (49%), Gaps = 15/338 (4%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAF------------QFVR 218
           P  I + I  Q  +  G   +A KLLD++   G+        AF              ++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G   +  SYN+++ +L  +GK +E  +L+ +M  R   P+VV+YS +I   C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+ ++   + KGL P+ Y+Y+ +I   CK G+   A + L  M+S   +PD V Y 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  F K G+   A + F+++      P+  +Y T+       G  I    +  EM+S+
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PDE+TY +LI   C+ G +  A  L  +M      P +++Y  +I G CK   ++ +
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            E+L  M +KG + N   Y  ++ GI   G   +A++L
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 7/335 (2%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG-QAFQFVRSL--ESRGCQPDV 229
           +P++    I+I   ++      A +L+ +  +  K  +G +  QF   L    +   P+ 
Sbjct: 131 EPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNP 190

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV-LR 288
           I++++  + L+ +G   E  KL+ +++S GL   VVT     + L R     + +++ ++
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G++ +  SY+ +I + C+ G++  A   L  M      PD+V+Y+T++  +C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +AL++ + +   G  PN  +YN++   L   G    A  ++ EM+S+ I PD + Y 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI    + G V  A     +M S +  P  I+Y  +I GF +  ++ E   +   M  +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           G KP+E TY  LI+     G    A  L N +V M
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 18/265 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ D +   ++ M   G + +V +   ++    +     +A+++M+ +E  G +PD  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  +I  +C+   I+ A+K+L  +  RG  P VVT+N+++   C  GM+E   ++   +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L     P  ITY  L++   +    +   K+   M                 G CK   +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A+   + +  +G  P V SYN L++      K  E  +L  EM   GL  +   Y+  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGL 295
           +     +G  E  +++   A EK L
Sbjct: 720 VDMCYEEGDVEITLNLCDEAIEKCL 744


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 228/461 (49%), Gaps = 17/461 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+   + G  +++      M   G +P V +   L+K F ++     A  +++   
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           + G   V  YN ++   C+  ++  A  + D++  +G +P +V+YN MI   C +G ++ 
Sbjct: 425 ENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDD 484

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A +V + ++    KP  ITYTIL++ +  +G  + A  + D+M                 
Sbjct: 485 AHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN 544

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+CK G V +A   + +   +   P  ++YN ++   +  G  +  E +  EM    + P
Sbjct: 545 GLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISP 604

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV+TY+ LI+  C+  K + A+ +    K KGL  D   Y  LI+ +CK   ++ A +F 
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFF 664

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             ++  G  P+ + YN +++A+    N + AL + +++ +   P ++  Y ++   L   
Sbjct: 665 SKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKE 724

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    AL + SEML +GI PD   YN LI+ LC  G ++ A  +L +M+     PTV+ Y
Sbjct: 725 GKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLY 784

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           N +I G  K   + E+  +   M +KG  P++TTY +L+ G
Sbjct: 785 NTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 221/510 (43%), Gaps = 66/510 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDV----VMCTKLIKK--------FFQE-- 85
           F  L+    RA K  E++    +M+ +G  P V    V+ T +I++         F E  
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214

Query: 86  ---------------RKSNKAVRVMEILEKYGEP-------DVFAYNALISGFCKANQIE 123
                          R   K  + +E    +G+        D  +Y+ +I   C+ + ++
Sbjct: 215 ERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLD 274

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
           LA+K+++     G+ P   TY  +IG+    G    A ++ D+++       V   T LI
Sbjct: 275 LASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLI 334

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           +   + G  + A++L DE                  +   G  P+V  +++L+     +G
Sbjct: 335 KGYCVRGDVNSALRLFDE------------------VVEVGVTPNVAIFSVLIEWCSKIG 376

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
             E+  +L T M   GL+P V   + L+    +    E+A  +L  A E G+     +Y+
Sbjct: 377 NVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYN 435

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++   C+ G+++ A    D MI  G  P +V+YN ++   CK G  D A E+   + + 
Sbjct: 436 IVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIES 495

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  PN  +Y  +    +  GD   A  M  +M++ GI P + T+NS+I+ LC+ G V EA
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEA 555

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
              L       F PT ++YN II G+ K   I+ +  V   M      PN  TY  LI G
Sbjct: 556 RDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLING 615

Query: 484 IGYGGWRAEAMELANALVSMHAISRDTFKR 513
                 ++  M+LA   + MH    D  KR
Sbjct: 616 F----CKSNKMDLA---LKMH----DDMKR 634



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 175/410 (42%), Gaps = 53/410 (12%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D   +N ++ S      I  A + F  +L D   P V    +L+ A +     + A +L 
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
           DEM                    R    D  +  +L+R  L  GK+ E E+   +   RG
Sbjct: 211 DEMA------------------ERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRG 252

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+ +  +YSI+I ++CR    + A  ++   +E G  P   +Y  +I A  + G    A+
Sbjct: 253 LKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEAL 312

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              D M+      ++    +++  +C  G+ + AL +F+++ +VG  PNV+ ++ +    
Sbjct: 313 RLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWC 372

Query: 380 WSSGDKIRALGMISEMLSKGIEP----------------------------------DEI 405
              G+  +A  + + M   G++P                                    +
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVV 432

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN ++  LC  G V+EA  L   M      P+++SYN +ILG CK   ++++ EV+  +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRL 514
            E G KPN  TY +L+EG    G    A  + + +V+   +  D TF  +
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSI 542



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           + +L   + M+ N    D+ + T LI    +E K + A+ +  E+L +   PD+F YN L
Sbjct: 693 EAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVL 752

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+G C   Q+E A K+L  +     +P V+ YN +I      G ++ AF++ D++L    
Sbjct: 753 INGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGL 812

Query: 173 KPTVITYTILIQATM 187
            P   TY IL+   +
Sbjct: 813 VPDDTTYDILVNGKL 827


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 237/486 (48%), Gaps = 24/486 (4%)

Query: 3   TVVSCINPKSNERVRV--SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFI 60
            V+  I   S ER+++   S + T+   +  + ++  T  + +I+     GK   +L+  
Sbjct: 95  NVLDAILKDSLERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLR 154

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVFAYNALISGFCKA 119
             M+  G  PDV+    L+    +     KA   V E+LE    P+   +N  I G+C  
Sbjct: 155 NKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLN 214

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC-KPT--V 176
           N ++ A  +   + + G  P+ VTYNI+I +LC +G+++ A K+ +++L D+C K T  +
Sbjct: 215 NNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDI 274

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           IT TI +   + +G   +A+   DEM                    RG Q DV++YN+L+
Sbjct: 275 ITSTIFMDGCLKKGDMVQALVHWDEM------------------LQRGTQIDVVAYNVLI 316

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                +       +   EM  RGL P++ TY+ LIS  C+ G  ++A  +     + G  
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  SY  +I   C  G +  A +FL  M+ +  +P+ + +N ++    ++G+   AL I
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++   G PPNV +YN +  A    G+ + A  +  EML  GI PD +TYN LI   C 
Sbjct: 437 RDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACN 496

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +  A+ L  +M    + P +I+Y  +I GFC    + E+ E+LA +   G   +   
Sbjct: 497 FGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556

Query: 477 YVLLIE 482
           + +LI+
Sbjct: 557 FQILIQ 562



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 160/352 (45%), Gaps = 11/352 (3%)

Query: 160 AFKVFDQLLRDNC------KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            F V D +L+D+       + +V    I +    LE      + ++  +  C +G +  A
Sbjct: 93  VFNVLDAILKDSLERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNL--CLEGKLRAA 150

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                 +  +G  PDV+++N L+  L   G  E+ + L+ EM+  G  PN  T++  I  
Sbjct: 151 LWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKG 210

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC--- 330
            C +   + A+ +       G+ P+  +Y+ LI A CK G L  A + L+ ++ D C   
Sbjct: 211 YCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKE 270

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI+     +    K G+  QAL  ++++   G   +V +YN +        D   A  
Sbjct: 271 TSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYR 330

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM  +G+ PD  TYN+LIS  C+ G +DEA  +   M      P +ISY +II G C
Sbjct: 331 YFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLC 390

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
               +  + + L  M E    P    + ++I+G G  G  + A+ + + +VS
Sbjct: 391 IHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVS 442



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 5/240 (2%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I +LC +GK   A+ +     +KG+ PD  +++ L++  CK G L+ A   +  M+  G
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+   +NT +  +C N N D+AL +F  +++ G  PN  +YN +  AL   G    A 
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 390 GMISEMLSK--GIEPDEITYNSLI--SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            ++ ++L    G E  +I  +++    CL +  MV +A+    +M     +  V++YN++
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMV-QALVHWDEMLQRGTQIDVVAYNVL 315

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I GFC  + +N +      MF++G  P+  TY  LI G    G   EA  +   +  M A
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 118/294 (40%), Gaps = 53/294 (18%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
            + G   ++L   + M+  G + DVV    LI  F   +  N A R   E+ ++   PD+
Sbjct: 285 LKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDI 344

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG----------- 155
           F YN LISGFCK   ++ A  +   +   G +PD+++Y ++I  LC  G           
Sbjct: 345 FTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVC 404

Query: 156 MIES------------------------AFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           M+E+                        A  + DQ++     P V TY  LI A +  G 
Sbjct: 405 MLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGN 464

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              A  +  EM                   C  G +  A +    +  RG +PD+I+Y  
Sbjct: 465 IVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTE 524

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           L+R     G   E E+L+ ++   GL  +   + ILI   CR      A D+ +
Sbjct: 525 LIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDLTK 578


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 217/415 (52%), Gaps = 22/415 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P +V  +K++ K  + +  +  + +   +E  G   D+++YN +I+  C+ ++  +A  V
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           + ++   G+ PDVVT + +I   C    +  A  +  ++     +P V+ Y  +I     
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID---- 123

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G CK G+V  A +    +E  G + D ++YN L+  L   G+W + 
Sbjct: 124 --------------GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 169

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            +LM +M+ R + PNV+T++ +I    ++GK  +A+ +      + + PD ++Y+ LI+ 
Sbjct: 170 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 229

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C  GR+D A + LD M++ GCLPD+V YNT++  FCK+   D+  ++F +++  G   +
Sbjct: 230 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 289

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +YNT+    + +G    A  + S M S+   P+  TY+ L+  LC +  V++A+ L  
Sbjct: 290 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFE 346

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +M+ +     + +YNI+I G CK   + ++ ++  ++  KG KP+  +Y  +I G
Sbjct: 347 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 401



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 50/369 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  +F  +L  +  M+  G +PDVV  + LI  F Q  +   A+ ++  +E+ G  PDV 
Sbjct: 57  RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 116

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +I G CK   +  A ++ DR+   G   D VTYN ++  LC  G    A ++   +
Sbjct: 117 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 176

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +  +  P VIT+T +I   + EG+  +AMKL +EM                 G+C  G V
Sbjct: 177 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 236

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL---------- 260
            +A Q +  + ++GC PDV++YN L+       + +EG KL  EM  RGL          
Sbjct: 237 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296

Query: 261 ----------------------EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
                                  PN+ TYSIL+  LC + + E A+ +    ++  +  D
Sbjct: 297 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y+ +I   CK G ++ A +    +   G  PD+V+Y T+++ FC+    D++  ++ 
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 359 KLSDVGCPP 367
           K+ + G  P
Sbjct: 417 KMQEDGLLP 425



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 187/397 (47%), Gaps = 21/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ ++S   K+   +L   +   +   G   D+ +YNI+I  LC       A  V
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P V+T + LI                   G C+   V  A   V  +E  
Sbjct: 68  VGKMMKFGYEPDVVTVSSLIN------------------GFCQGNRVFDAIDLVSKMEEM 109

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PDV+ YN ++     +G   +  +L   M   G+  + VTY+ L++ LC  G+  DA
Sbjct: 110 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 169

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             ++R    + + P+  ++  +I  + K+G+   A++  + M      PD+  YN+++  
Sbjct: 170 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 229

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +G  D+A ++ + +   GC P+V +YNT+ +    S        +  EM  +G+  D
Sbjct: 230 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 289

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITYN++I    + G  D A  +   M+S   RP + +Y+I++ G C   R+ +++ +  
Sbjct: 290 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 346

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M +   + + TTY ++I G+   G   +A +L  +L
Sbjct: 347 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 383



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 124/248 (50%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI     P++V +S ++S + +    +  + +    +  G+  D YSY+ +I+  C+  R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
             +A+  +  M+  G  PD+V  ++++  FC+      A+++  K+ ++G  P+V  YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +       G    A+ +   M   G+  D +TYNSL++ LC  G   +A  L+ DM    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P VI++  +I  F K  + +E++++   M  +   P+  TY  LI G+   G   EA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 495 ELANALVS 502
           ++ + +V+
Sbjct: 241 QMLDLMVT 248


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 238/467 (50%), Gaps = 21/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   ++  +  M   G +PD+ +C   I       + +KAVR +E ++     P+V 
Sbjct: 181 RAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVI 240

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C  +++E A +++  +  +G SPD ++Y  ++G LC    I+    + +++
Sbjct: 241 TYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKM 300

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG-------MCKKGM 209
           L+D N  P  +TY   +      G  D+A++ L          D++G        C++G 
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A + V  + S+GC PDV++Y  ++  L    K ++ +K++ +M   G +PN V+Y+ 
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L++ LC++G + +A +++  ++E    P+A +Y  L+  + ++G+   A + +  MI  G
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V  N ++ + C+    D+A    E+  + GC  NV ++ T+        D   AL
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M      PD +TY ++I  L + G ++EA  L + M    + PT ++Y  +I  +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  R+ + +++L  M  +  +   T Y  +IE +   G   +A +L
Sbjct: 601 CRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKL 645



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 22/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + +++   I  M   GC PD +    ++    +E++  +   +ME + K  
Sbjct: 245 LIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDS 304

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              PD   YN  +    K    + A + L     R F  D V Y+ ++ S C  G ++ A
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA 364

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ +++    C P V+TYT +I                   G+C++  V QA + +R +
Sbjct: 365 KEIVNEMFSKGCIPDVVTYTSVIN------------------GLCQERKVDQAKKMLRQM 406

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC+P+ +SY  LL  L   G   E  ++M         PN +TYS+L+    R+GK+
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS 466

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A D++R   +KG  P     + LI + C++ ++D A  F++  +++GC  ++VN+ T+
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  FC+  + + AL + + +      P+V +Y T+  AL   G    A  +  +ML  G 
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGW 586

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P  +TY ++I   CR G V++ + LL  M S +   T  +YN +I   C    + ++ +
Sbjct: 587 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYK 644

Query: 461 VLAAMFEKGCKPNETTYVLLIE 482
           +L  +     K +  T  +LIE
Sbjct: 645 LLGKVLRTASKIDANTCHMLIE 666



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 18/421 (4%)

Query: 87  KSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           K   A+R + +++K G EPD+   N  I      N+++ A + L+R++     P+V+TYN
Sbjct: 184 KLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYN 243

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            +I   C    +E A ++  ++    C P  I+Y  ++     E +  +   L+++M   
Sbjct: 244 CLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKM--- 300

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
                         L+     PD ++YN  +  L   G  +E  + + E   R    + V
Sbjct: 301 --------------LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            YS ++ S CR+G+ + A +++     KG  PD  +Y  +I+  C++ ++D A + L  M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              GC P+ V+Y  +L   CKNGN+ +A E+     +    PN  +Y+ +       G  
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS 466

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ EM+ KG  P  +  N LI  LC++  VDEA   +    +      V+++  +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I GFC+   +  ++ +L  M+     P+  TY  +I+ +G  G   EA +LA  ++ +  
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGW 586

Query: 506 I 506
           I
Sbjct: 587 I 587



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 24/398 (6%)

Query: 91  AVRVMEILEKYG---EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           A RV+ ++ K      P+ F Y  ++  + +A ++  A + L  ++  G  PD+   N  
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGY--VMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTA 210

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I  L     ++ A +  +++      P VITY  LI+                  G C  
Sbjct: 211 IHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIK------------------GYCDL 252

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVT 266
             +  A + +  +  +GC PD ISY  ++  L    + +E   LM +M+    L P+ VT
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+  +  L + G  ++A++ LR A+E+    D   Y  ++ ++C++GR+D A E ++ M 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S GC+PD+V Y +++   C+    DQA ++  ++   GC PN  SY  + + L  +G+ +
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  M++        P+ ITY+ L+    R+G   EA  L+ +M    F PT +  N++I
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              C+  +++E+   +      GC  N   +  +I G 
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 198/431 (45%), Gaps = 26/431 (6%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           +++LL   V    F+ ++ +    G  DE+L F+        + D V  + ++  F +E 
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKH---GHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 359

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           + +KA  ++ E+  K   PDV  Y ++I+G C+  +++ A K+L ++   G  P+ V+Y 
Sbjct: 360 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 419

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
            ++  LC  G    A ++ +        P  ITY++L+     EG++ +A  L+ EM   
Sbjct: 420 ALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                          +C++  V +A +F+    + GC  +V+++  ++         E  
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L+ +M      P+VVTY+ +I +L + G+ E+A  +       G  P   +Y  +I  
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQ 599

Query: 309 YCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           YC+ GR++  ++ L+ M+S   C      YN ++   C  GN +QA ++  K+       
Sbjct: 600 YCRMGRVEDLLKLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           + ++ + +  +  S G  + +  +   M ++ + PD      +   L  +G  +EA  L+
Sbjct: 657 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 716

Query: 428 VD-MESTRFRP 437
           +  +E  R  P
Sbjct: 717 LRFVERGRISP 727



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 6/304 (1%)

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           +++L +  +C+           R +E R   P+   Y M+  +    GK     + +T M
Sbjct: 141 LEILSKTKLCQGAKRVLRLMAKRRIERR---PEAFGYVMV--SYSRAGKLRNAMRXLTMM 195

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+EP++   +  I  L    + + AV  L   +   + P+  +Y+ LI  YC   RL
Sbjct: 196 QKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRL 255

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVSSYNT 374
           + A E +  M   GC PD ++Y T++   CK     +   + EK L D    P+  +YNT
Sbjct: 256 EDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNT 315

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
               L   G    AL  + E   +    D++ Y++++   CR+G +D+A  ++ +M S  
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V++Y  +I G C+ R+++++ ++L  M++ GCKPN  +Y  L+ G+   G   EA 
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435

Query: 495 ELAN 498
           E+ N
Sbjct: 436 EMMN 439



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 3/261 (1%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           + D I Y  +L  L      +  ++++  M  R +E     +  ++ S  R GK  +A+ 
Sbjct: 131 RHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
            L   ++ G+ PD    +  I       RLD A+ FL+ M      P+++ YN ++  +C
Sbjct: 191 XLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYC 250

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK--GIEPD 403
                + A E+  ++   GC P+  SY T+   L     +I+ L ++ E + K   + PD
Sbjct: 251 DLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKE-KRIKELRLLMEKMLKDSNLLPD 309

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           ++TYN+ +  L + G  DEA+  L + E  RFR   + Y+ I+  FC+  R++++ E++ 
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
            MF KGC P+  TY  +I G+
Sbjct: 370 EMFSKGCIPDVVTYTSVINGL 390


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 218/442 (49%), Gaps = 29/442 (6%)

Query: 86  RKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           RK ++A+R+  E+L     P+   YN LI GFCK  Q+  A  V   ++S G  P+  T 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
           N ++  LC  G + SA K+F ++      PT  ++ IL++   + G+  +  K +   G 
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGV 123

Query: 204 -------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                        +   G + +A     ++    C PD+++YN+L+     +G+  E + 
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           LM E++  G EPNV TYSI+I+  C+  K E+A +V     E    P+A +++ LI+ +C
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN-GNADQALEIFEKLSDVGCPPNV 369
           K G L+ AI+    M   GC   IV YNT++ + CK  G    A+++F KL   G  P +
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YN++        +    L ++  M ++G +PD ITYN LIS LC    V++A  L   
Sbjct: 301 VTYNSLIQGFSERAND--GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P V ++N +I G C  +++ E+  +L  M      P+ TT+  +I      G 
Sbjct: 359 MACA---PNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGA 411

Query: 490 RAEAMELANALVSMHAISRDTF 511
             +A E+   ++  H    +T+
Sbjct: 412 MHDAREVMKDMLK-HGFYPNTY 432



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 32/361 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++  F AG+   ++ F + M A+G +PD+     L+       +  +A  +   +    
Sbjct: 101 LLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT--C 155

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD+  YN L+ G+CK  Q   A  ++  +   G+ P+V TY+I+I   C    +E A++
Sbjct: 156 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 215

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           VF +++  NC P  +T+  LI      G  + A+KL  EM                  +C
Sbjct: 216 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 275

Query: 206 KK-GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           KK G V  A      LE  G  P +++YN L++      +  +G +L+  M + G +P+V
Sbjct: 276 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDV 333

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY+ LIS LC   + EDA  +          P+  +++ LI   C   +++ A   LD 
Sbjct: 334 ITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDR 390

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M +    PD+  +NTI+ AFCK G    A E+ + +   G  PN  +   +   + SS  
Sbjct: 391 MTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSKG 446

Query: 385 K 385
           K
Sbjct: 447 K 447



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVMEIL 98
           F  LI    +AG  ++++     M   GCK  +V    LI    ++R     AV +   L
Sbjct: 232 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 291

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           E  G  P +  YN+LI GF +     L  ++L  + + G  PDV+TYN +I  LCS   +
Sbjct: 292 EGAGLTPTIVTYNSLIQGFSERANDGL--RLLCHMHAEGCKPDVITYNCLISGLCSANRV 349

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A ++F+ +    C P V T+  LI+    + + ++A  +LD M               
Sbjct: 350 EDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILDRM--------------- 391

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                    PD+ ++N ++      G   +  ++M +M+  G  PN  T
Sbjct: 392 -------TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 212/448 (47%), Gaps = 26/448 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G   D   C  L+    + R   +   ++  +EK    P V  +  L++  CKA +I+ A
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335

Query: 126 NKVLDRLRSRGFS------PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC-KPTVIT 178
            +V DRLR +G S      PDVV +N +I  LC  G  E    + +++   N  +P  +T
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLE 221
           Y  LI      G  D+A +L  +M                 G+CK G V +A +F   ++
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G + +  +Y  L+     +       +   EM+S G  P+ V Y  LIS LC  G+  
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMN 515

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA  V+   K  G + D   Y+ LIS +CK  +L+   E L  M   G  PD + YNT++
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI 575

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-I 400
           +   K G+   A ++ EK+   G  P+V +Y  +  A  S  +    + +  EM S   +
Sbjct: 576 SYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKV 635

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+ + YN LI  LCR+  VD A+ L+ DM+  R RP   +YN I+ G    + ++++ E
Sbjct: 636 PPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFE 695

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           ++  M E+ C+P+  T  +L E +   G
Sbjct: 696 LMDRMVEEACRPDYITMEVLTEWLSAVG 723



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 239/510 (46%), Gaps = 65/510 (12%)

Query: 37  ETQFMKLIK--RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           E  F +L++  RSF  G   E +  +  +   G  PD    T+L+ K   ++K+  A  V
Sbjct: 212 EIVFGELVRSGRSFPDG---EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEV 268

Query: 95  ME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +  ++   G  D  + NAL++   +   I+  N++L  +  R   P VVT+ I++  LC 
Sbjct: 269 LHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCK 328

Query: 154 RGMIESAFKVFDQLLRDN------CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
              I+ A +VFD+L           +P V+ +  LI      G+ +  + LL+EM M   
Sbjct: 329 ARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKM--- 385

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G + +              P+ ++YN L+      G ++   +L  +M   G++PNV+T 
Sbjct: 386 GNINR--------------PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITL 431

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L+  LC+ G+   AV+     K KGL  +A +Y  LISA+C    ++ A++  + M+S
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491

Query: 328 DGCLPDIVNY-----------------------------------NTILAAFCKNGNADQ 352
            GC PD V Y                                   N +++ FCK    ++
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
             E+  ++ + G  P+  +YNT+ S L  +GD   A  ++ +M+ +G+ P  +TY ++I 
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611

Query: 413 CLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             C    VDE + +  +M ST +  P  + YNI+I   C+   ++ +I ++  M  K  +
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVR 671

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           PN TTY  +++G+       +A EL + +V
Sbjct: 672 PNTTTYNAILKGVRDKKMLHKAFELMDRMV 701



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 185/409 (45%), Gaps = 26/409 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANG------CKPDVVMCTKLIKKFFQERKSNKAVR 93
           F  L+    +A + DE+L   + +   G       +PDVV+   LI    +  K    + 
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLS 378

Query: 94  VMEILE--KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++E ++      P+   YN LI GF KA   + A+++  ++   G  P+V+T N ++  L
Sbjct: 379 LLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGL 438

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G +  A + F+++     K    TYT LI A       ++AM+  +EM         
Sbjct: 439 CKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDA 498

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+C  G +  A   V  L+  G   D   YN+L+       K E   +L+TE
Sbjct: 499 VVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTE 558

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M   G++P+ +TY+ LIS L + G    A  V+    ++GL P   +Y  +I AYC    
Sbjct: 559 MEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKN 618

Query: 315 LDLAIEFLDYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +D  ++    M S   +P + V YN ++ A C+N + D+A+ + E +      PN ++YN
Sbjct: 619 VDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYN 678

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            +   +       +A  ++  M+ +   PD IT   L   L   G +++
Sbjct: 679 AILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 205/439 (46%), Gaps = 30/439 (6%)

Query: 74  MCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           +C  L++   +  ++  A+ V++ + +             SGF    +I     V    R
Sbjct: 176 LCHGLLRVLLKSGRAGDALHVLDEMPQAN-----------SGFSVTGEIVFGELV----R 220

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC--KPTVITYTILIQATMLEGQ 191
           S    PD      ++  L  RG+    FK+  QL+   C  +   + + +L     L G 
Sbjct: 221 SGRSFPDGEVVG-LVAKLGERGVFPDGFKL-TQLVGKLCGDQKNGVAWEVLHCVMRLGGA 278

Query: 192 TDKAM--KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
            D A    LL  +G  +   + +  + +  +E R  +P V+++ +L+  L    + +E  
Sbjct: 279 VDAASCNALLTWLGRGRD--IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEAL 336

Query: 250 KLMTEMISRG------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDAYSY 302
           ++   +  +G      +EP+VV ++ LI  LC+ GK ED + +L   K   +  P+  +Y
Sbjct: 337 QVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTY 396

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + LI  + K G  D A E    M  +G  P+++  NT++   CK+G   +A+E F ++  
Sbjct: 397 NCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKG 456

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   N ++Y  + SA     +  RA+    EMLS G  PD + Y SLIS LC  G +++
Sbjct: 457 KGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMND 516

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  ++  ++   F      YN++I GFCK +++    E+L  M E G KP+  TY  LI 
Sbjct: 517 ASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLIS 576

Query: 483 GIGYGGWRAEAMELANALV 501
            +G  G  A A ++   ++
Sbjct: 577 YLGKTGDFATASKVMEKMI 595



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 160/382 (41%), Gaps = 55/382 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESM-VANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI    + GK ++ L  +E M + N  +P+ V    LI  FF+    ++A  +   +
Sbjct: 360 FNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM 419

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G +P+V   N L+ G CK  ++  A +  + ++ +G   +  TY  +I + C    I
Sbjct: 420 NEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNI 479

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A + F+++L   C P  + Y  LI    + G+ + A  ++ ++               
Sbjct: 480 NRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVL 539

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G CKK  + + ++ +  +E  G +PD I+YN L+  L   G +    K+M +MI  GL
Sbjct: 540 ISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGL 599

Query: 261 EPNVVTY------------------------------------SILISSLCRDGKTEDAV 284
            P+VVTY                                    +ILI +LCR+   + A+
Sbjct: 600 RPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAI 659

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            ++   K K + P+  +Y+ ++        L  A E +D M+ + C PD +    +    
Sbjct: 660 SLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719

Query: 345 CKNGNADQALEIFEKLSDVGCP 366
              G  ++     E   D   P
Sbjct: 720 SAVGEIEKLKHFVEGYQDSSYP 741



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 20/220 (9%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F +  + +  LI    +  K +     +  M   G KPD +    LI    +     
Sbjct: 526 LAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIM 147
            A +VME + K G  P V  Y A+I  +C    ++   K+   + S     P+ V YNI+
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I +LC    ++ A  + + +     +P   TY  +++                  G+  K
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILK------------------GVRDK 687

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
            M+ +AF+ +  +    C+PD I+  +L   L  +G+ E+
Sbjct: 688 KMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 245/536 (45%), Gaps = 38/536 (7%)

Query: 20  SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP-DVVMCTKL 78
           +SA  RP+T           + K ++    AG   E++  +  M  +G  P +      +
Sbjct: 152 ASAGARPDTF---------AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 202

Query: 79  IKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I   ++  +   AV V  E+ E+   P+   YN +I G  K   +E    + D++   G 
Sbjct: 203 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGL 262

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            P+ +TYN+++  LC  G +     + D++      P   TY+IL       G +   + 
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           L  +                  G+CK G V  A + ++SL + G  P  + YN L+    
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 382

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ E       +M SR ++P+ +TY+ LI+ LC+  +  +A D+L   ++ G+ P   
Sbjct: 383 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 442

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +++ LI AY + G+L+     L  M  +G  P++V+Y +I+ AFCKNG   +A+ I + +
Sbjct: 443 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 502

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
                 PN   YN +  A    G   +A  ++ +M S GI P  +TYN LI  LC    +
Sbjct: 503 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 562

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  ++  + + R  P  +SYN +I   C    I++++++   M + G K    TY  L
Sbjct: 563 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 622

Query: 481 IEGIGYGGWRAEAME------LANALV---SMHAISRDTFKRLNRTFPLLDVYKEI 527
           I G+G G  R   ME      + N +V   ++H I  + + +        D+ KE+
Sbjct: 623 ISGLG-GAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 227/486 (46%), Gaps = 18/486 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   +RAG+  +++   + M      P+ +    +I    +         + + +  +G
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN L+SG C+A ++   + +LD + S+   PD  TY+I+   L   G  ++  
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F + L++       T +IL+     +G+   A ++L  +                 G 
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G +  AF     ++SR  +PD I+YN L+  L    +    + L+ EM   G+ P V
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ LI +  R G+ E    VL   +E GL P+  SY  +++A+CK+G++  A+  LD 
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     LP+   YN I+ A+ ++G  DQA  + EK+   G  P++ +YN +   L +   
Sbjct: 502 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 561

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I+ + +  + PD ++YN+LIS  C  G +D+A+ L   M     + TV +Y+ 
Sbjct: 562 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 621

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     R+ E   +   M +    P+   + +++E     G   +A +L   ++   
Sbjct: 622 LISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681

Query: 505 AISRDT 510
               DT
Sbjct: 682 NNHDDT 687



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEG 190
           L S G  PD   +N  + +  + G +  A  +  ++ RD    P   +Y ++I      G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210

Query: 191 QTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           +   A+++ DEM                 G  K G +   F     +   G +P+ I+YN
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +LL  L   G+  E   L+ EM S+ + P+  TYSIL   L R+G ++  + +   + + 
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+T   Y+   L++  CKDG++ +A E L  +++ G +P  V YNT++  +C+ G  + A
Sbjct: 331 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 390

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
              F ++      P+  +YN + + L  +     A  ++ EM   G+ P   T+N+LI  
Sbjct: 391 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 450

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             R G +++   +L +M+    +P V+SY  I+  FCK  +I E++ +L  MF K   PN
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 510

Query: 474 ETTYVLLIE 482
              Y  +I+
Sbjct: 511 AQVYNAIID 519



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 36/300 (12%)

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------- 261
           E+R   P + S N+LL  LL++G+  +  +    + S G                     
Sbjct: 117 EARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDL 176

Query: 262 -----------------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
                            PN  +Y+++I+ + R G+  DAV+V     E+ + P+  +Y+ 
Sbjct: 177 GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNT 236

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I  + K G L+      D M+  G  P+ + YN +L+  C+ G   +   + ++++   
Sbjct: 237 MIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 296

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+  +Y+ +F  L  +GD    L +  + L  G+   + T + L++ LC+DG V  A 
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +L  + +    PT + YN +I G+C+T  +  +      M  +  KP+  TY  LI G+
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 199/384 (51%), Gaps = 27/384 (7%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           +RG+ PDV TY  +I  LC  G   +A  +F ++    C+P V+TY+ +I +        
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDS-------- 54

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +CK   V +A      ++++G  P++ +YN L++ L N  +W E   ++ 
Sbjct: 55  ----------LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN 104

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM+S  + PN+VT+S+LI+  C++G   +A  VL+   E G+ P+  +Y  L++ Y    
Sbjct: 105 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 164

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            +  A +  D MI+ GC PD+ +YN ++  +CK     +A ++F ++   G  P++ SYN
Sbjct: 165 EVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 224

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+   L   G    A  +   ML+ G  PD  TY+ L+   C+ G + +A  L   M+ST
Sbjct: 225 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST 284

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P ++ YNI+I   CK+R + E+ ++ + +F +G +PN   + L      +  W+  A
Sbjct: 285 YLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL------FEIWKRMA 338

Query: 494 MELANALVSMHAISRDTFK-RLNR 516
               N L+ +   S D F  R+N+
Sbjct: 339 ALRMNFLIMLS--SEDFFSTRMNQ 360



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 160/307 (52%), Gaps = 19/307 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+PDVV  + +I    ++R+ N+A+ +   ++  G  P++F YN+LI G C  ++   A
Sbjct: 40  GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 99

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + +L+ + S    P++VT++++I   C  G +  A  V   +     +P V+TY+ L+  
Sbjct: 100 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
             L+ +  +A KL D M                   ++GC+PDV SYN+L+       + 
Sbjct: 160 YSLQAEVFEARKLFDVM------------------ITKGCKPDVFSYNILINGYCKAKRI 201

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E ++L  EMI +GL P++V+Y+ LI  LC+ G+  +A D+ +     G  PD  +Y  L
Sbjct: 202 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 261

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +  +CK G L  A      M S    P++V YN ++ A CK+ N  +A ++F +L   G 
Sbjct: 262 LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 321

Query: 366 PPNVSSY 372
            PN+  +
Sbjct: 322 QPNMKHW 328



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 18/343 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PDV  Y  +I+G CK  +   A  +  ++   G  PDVVTY+ +I SLC    +  A  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F  +      P + TY  LIQ                  G+C      +A   +  + S
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQ------------------GLCNFSRWREASAMLNEMMS 108

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
               P+++++++L+      G   E   ++  M   G+EPNVVTYS L++      +  +
Sbjct: 109 LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFE 168

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +      KG  PD +SY+ LI+ YCK  R+  A +  + MI  G  PDIV+YNT++ 
Sbjct: 169 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 228

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C+ G   +A ++F+ +   G  P++ +Y+ +       G   +A  +   M S  ++P
Sbjct: 229 GLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKP 288

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + + YN LI  +C+   + EA  L  ++     +P +  + + 
Sbjct: 289 NMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 135/248 (54%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG +P+V TY+ +I+ LC+ G+T  A  + +   E G  PD  +Y  +I + CKD R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           ++ A++   YM + G  P+I  YN+++   C      +A  +  ++  +   PN+ +++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + +     G+   A G++  M   G+EP+ +TY+SL++       V EA  L   M +  
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +P V SYNI+I G+CK +RI E+ ++   M  +G  P+  +Y  LI+G+   G   EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 495 ELANALVS 502
           +L   +++
Sbjct: 241 DLFKNMLT 248



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 53/224 (23%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
           S +A  F+    F + M+  GCKP                                  DV
Sbjct: 161 SLQAEVFEARKLF-DVMITKGCKP----------------------------------DV 185

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F+YN LI+G+CKA +I  A ++ + +  +G +PD+V+YN +I  LC  G +  A  +F  
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +L +   P + TY+IL+     +G   KA                  F+  R+++S   +
Sbjct: 246 MLTNGNLPDLCTYSILLDGFCKQGYLAKA------------------FRLFRAMQSTYLK 287

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           P+++ YN+L+  +      +E  KL +E+  +GL+PN+  + + 
Sbjct: 288 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+++G +PD  TY ++I+ LC+ G    A GL   M     +P V++Y+ II   CK RR
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMH 504
           +NE++++ + M  KG  PN  TY  LI+G+  +  WR EA  + N ++S++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR-EASAMLNEMMSLN 110


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 226/478 (47%), Gaps = 41/478 (8%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            +I     A  FDE++ F+  M  N C P+VV    L+  F ++++     R++ ++   
Sbjct: 281 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 340

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC------SR 154
           G  P+   +N+L+  +C       A K+L+R+ + G  P  V YNI IGS+C      S 
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 400

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
            +++ A K++ ++L  NC    +      +                   +C  G   +AF
Sbjct: 401 DLLDLAEKIYGEMLAANCVLNKVNVANFARC------------------LCGVGKFDKAF 442

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           Q ++ +  +G  PD  +Y+ ++  L +  K E+   L  EM   G+ P+V TY+ILI S 
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ G  E A  +    +  G +P   +Y  LI AY K  ++  A +    M+  GC P+ 
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562

Query: 335 VNYNTILAAFCKNGNADQALEIFEKL--------SDVGCP--------PNVSSYNTMFSA 378
           V Y  ++   CK GN  +A E++ KL        SD   P        PNV +Y  +   
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +     A  ++  MLS G EP+ I Y++LI   C+ G +D A  + + M    + P+
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           V +Y  +I    K  R++ +++VL+ M +  C PN  TY  +I+G+   G   +A++L
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 740



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 34/354 (9%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+A  C  + V      +      K +KA +++ E++ K   PD   Y+ +I+  C A +
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A  +   ++  G +PDV TY I+I S C  G+IE A  +F+++    C PTV+TYT 
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 532

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL---- 220
           LI A +   Q  +A  +   M                 G+CK G + +AF+    L    
Sbjct: 533 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592

Query: 221 ------------ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                       +     P+V++Y  L+  L    K +   +L+  M+S G EPN + Y 
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C+ GK + A +V     + G  P  ++Y  LI    KDGRLDLA++ L  M+ D
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            C P++V Y  ++   C+ G +++AL++   + + GC PNV +Y  +   L  S
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 199/494 (40%), Gaps = 78/494 (15%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+++  +    N+A+  +  L+ +G  P    YNAL+     A Q++L  +V   +   G
Sbjct: 180 LVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG 239

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F  D  T      +LC  G    A    D + R++ K   +  T +I   M     D+AM
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             L  M                 G  KK  +G   + +  + + GC P+   +N L+ + 
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD---------------------- 277
            N   +    KL+  M + G  P  V Y+I I S+C                        
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416

Query: 278 -------------------GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
                              GK + A  +++    KG  PD  +Y  +I+  C   +++ A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 M   G  PD+  Y  ++ +FCK G  +QA  +FE++  VGC P V +Y  +  A
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR---- 434
              +    +A  +   M+  G  P+++TY +L+  LC+ G + +A  +   +  T     
Sbjct: 537 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 596

Query: 435 ------------FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                         P V++Y  ++ G CK  +++ + E+L AM   GC+PN   Y  LI+
Sbjct: 597 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656

Query: 483 GIGYGGWRAEAMEL 496
           G    G    A E+
Sbjct: 657 GFCKAGKIDSAQEV 670



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 167/427 (39%), Gaps = 73/427 (17%)

Query: 133 RSRGFSPDVVTYNIMIG-----SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           R RGF  D V   ++        LC+R  + +  +V           T   Y  L  A  
Sbjct: 98  RCRGFLTDSVVVAVLGAVRDAPELCARFFLWAERQV-------GYSHTGACYDALADALG 150

Query: 188 LEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVI 230
            +G+   A +LL E+G                  C+ GM  +A + +  L+  G +P  +
Sbjct: 151 FDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKV 210

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN L++ L + G+ + G ++  EM   G   +  T      +LC++G+  DA+D++   
Sbjct: 211 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMI--- 267

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           + +    D      +IS   +    D A+ FL  M  + C+P++V Y T+L+ F K    
Sbjct: 268 EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 327

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
                I   +   GC PN S +N++  +  +  D   A  +++ M + G  P  + YN  
Sbjct: 328 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 387

Query: 411 IS-----------------------------------------CLCRDGMVDEAVGLLVD 429
           I                                          CLC  G  D+A  L+ +
Sbjct: 388 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 447

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M    F P   +Y+ +I   C   ++ ++  +   M   G  P+  TY +LI+     G 
Sbjct: 448 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507

Query: 490 RAEAMEL 496
             +A  L
Sbjct: 508 IEQAQWL 514


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 18/398 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+   +  LI G C   QI  A    D + + GF  D V Y  +I  LC  G   +A  
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +  ++  +  +P V+ Y+ +I                   GMCK   V  AF     + S
Sbjct: 184 LLRRVDGNLVQPNVVMYSTIID------------------GMCKDKHVNDAFDLYSEMVS 225

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  P+V++Y+ L+     +G+ ++   L  +MI   ++P+V T++IL+   C+DGK ++
Sbjct: 226 KGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKE 285

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
              V     ++G+ P+  +Y  L+  YC    ++ A   L  M   G  PDI +YN ++ 
Sbjct: 286 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILID 345

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FCK    D+A+ +F+++      P+V +YN++   L   G    AL ++ EM  +G+ P
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITY+S++  LC++  VD+A+ LL  ++    RP + +Y I+I G CK  R+ ++  + 
Sbjct: 406 DIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIF 465

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +  KG      TY ++I G    G   EA+ L + +
Sbjct: 466 EDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 213/419 (50%), Gaps = 19/419 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P+ +  T LIK    + + ++A+   + +   G + D   Y  LI G CK  +   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +L R+      P+VV Y+ +I  +C    +  AF ++ +++     P V+TY+ LI  
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
               GQ   A+ L ++M +                     +PDV ++N+L+      GK 
Sbjct: 242 FFTVGQLKDAIDLFNKMIL------------------ENIKPDVYTFNILVDGFCKDGKM 283

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +EG+ +   M+ +G++PNVVTY  L+   C   +   A  +L    ++G+ PD  SY+ L
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  +CK  ++D A+     M     +PD+V YN+++   CK G    AL++ +++ D G 
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           PP++ +Y+++  AL  +    +A+ +++++  +GI P+  TY  LI  LC+ G +++A  
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  D+    +  TV +Y ++I GFC     +E++ +L+ M +  C P+  TY ++I  +
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 225/481 (46%), Gaps = 34/481 (7%)

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
           VV  +  + K F   +  K      I     + +   Y+++ + F   N +  A  +  R
Sbjct: 7   VVPVSYFVPKKFHSFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSR 66

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV--------------- 176
           L  +  +P  + +N ++GSL       +   +  Q+  +   P +               
Sbjct: 67  LLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPN 126

Query: 177 -ITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
            IT+T LI+   L+GQ  +A+   D +                 G+CK G    A   +R
Sbjct: 127 TITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 186

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++    QP+V+ Y+ ++  +       +   L +EM+S+G+ PNVVTYS LIS     G
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + +DA+D+      + + PD Y+++ L+  +CKDG++         M+  G  P++V Y 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++  +C     ++A  I   +S  G  P++ SYN +            A+ +  EM  K
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I PD +TYNSLI  LC+ G +  A+ L+ +M      P +I+Y+ I+   CK  +++++
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRT 517
           I +L  + ++G +PN  TY +LI+G+  GG   +A  +  + LV  + I+ +T+  +   
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486

Query: 518 F 518
           F
Sbjct: 487 F 487



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 195/388 (50%), Gaps = 19/388 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + F + +  +  LI    + G+   +L  +  +  N  +P+VVM + +I    +++  N 
Sbjct: 156 MGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVND 215

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E++ K   P+V  Y+ALISGF    Q++ A  + +++      PDV T+NI++ 
Sbjct: 216 AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C  G ++    VF  +++   KP V+TY  L+    L  + +KA  +L  M       
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP 335

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK   V +A    + +  +   PDV++YN L+  L  +GK     KL+
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  RG+ P+++TYS ++ +LC++ + + A+ +L   K++G+ P+ Y+Y  LI   CK 
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GRL+ A    + ++  G    +  Y  ++  FC  G  D+AL +  K+ D  C P+  +Y
Sbjct: 456 GRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTY 515

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
             +  +L+   +  +A   + EM+++G+
Sbjct: 516 EIIIRSLFDKDENDKA-EKLREMITRGL 542


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 256/521 (49%), Gaps = 36/521 (6%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFM------------KLIKRSF-RAGKFDESLYFIESMV 64
           +S+  E+  NTH  SF       M             L+ + F R+G+ D+++     M 
Sbjct: 80  LSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK 139

Query: 65  AN-GCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKAN 120
            N  C  PD V    L+  F + ++  +A  + E ++K G+  P++  Y+ LI  +CK+ 
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           ++     +L+ +   G   DV  Y+ +I + C  G IE+  ++FD++LR    P V+TY+
Sbjct: 200 EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYS 259

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            L+Q     G+  +A ++L +M                 G+CK G  G A + +  +  +
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P  ++YN+++  L    + ++   ++  M+ +G +P+ VTY+ L+  LC  GK  +A
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA 379

Query: 284 VDV--LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +D+  L  +++  + PD ++ + LI   CK+GR+  A      M+  G   +IV YN ++
Sbjct: 380 MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI 439

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +       +AL++++   + G  PN  +Y+ M + L        A G+  +M   GI 
Sbjct: 440 EGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR 499

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P  I YN+L++ LCR+  +++A  L  +M +      V+S+NIII G  K   +  + E+
Sbjct: 500 PTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKEL 559

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           L+ MF     P+  T+ +LI      G   EAM L   +VS
Sbjct: 560 LSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 202/438 (46%), Gaps = 23/438 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           P    C+ LI    + R+ +  V V  +++     P   + +AL   F   +    A  V
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR--DNCKPTVITYTILIQAT 186
           L  +  RGF  +V   N+++   C  G  + A  +F Q+ R  D   P  +TY  L+   
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 187 MLEGQTDKAMKLLDEMG------------------MCKKGMVGQAFQFVRSLESRGCQPD 228
               +  +A  L + M                    CK G VG+    +  +E  G + D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V  Y+ L+      G  E G +L  EM+ R + PNVVTYS L+  L R G+  +A ++L+
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G+ PD  +Y  L    CK+GR   AI+ LD M+  G  P  + YN ++   CK  
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK--GIEPDEIT 406
             D A  + E +   G  P+  +YNT+   L  +G    A+ +   +LS+   ++PD  T
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            N+LI  LC++G V +A  +   M     +  +++YN +I G+   R++ E++++     
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459

Query: 467 EKGCKPNETTYVLLIEGI 484
           E G  PN  TY ++I G+
Sbjct: 460 ESGFSPNSMTYSVMINGL 477



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 226/467 (48%), Gaps = 29/467 (6%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
            + RPN  L+++ V       LI    ++G+  E L  +E M   G K DV + + LI  
Sbjct: 179 GDCRPN--LVTYSV-------LIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISA 229

Query: 82  FFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           F  E        +  E+L +   P+V  Y+ L+ G  +  +   A+++L  + +RG  PD
Sbjct: 230 FCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPD 289

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           VV Y ++   LC  G    A KV D +++   +P  +TY +++     E + D A  +++
Sbjct: 290 VVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVE 349

Query: 201 EM-----------------GMCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLN 241
            M                 G+C  G + +A    + L  E    +PDV + N L++ L  
Sbjct: 350 MMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCK 409

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+  +  ++ + M+  GL+ N+VTY+ LI       K  +A+ + + A E G +P++ +
Sbjct: 410 EGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMT 469

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I+  CK   L +A      M   G  P +++YN ++ + C+  + +QA  +F+++ 
Sbjct: 470 YSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMR 529

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           +V    +V S+N +      +GD   A  ++SEM    + PD +T++ LI+   + GM+D
Sbjct: 530 NVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLD 589

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           EA+GL   M S    P V+ ++ ++ G+       + I +L  M +K
Sbjct: 590 EAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 190/389 (48%), Gaps = 22/389 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R G++ E+   ++ M A G +PDVV  T L     +  ++  A++V++++ + GE P   
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++G CK ++++ A  V++ +  +G  PD VTYN ++  LC  G I  A  ++  L
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 168 LRD--NCKPTVITYTILIQATMLEGQTDKAMKL---LDEMGMCKKGMVGQAFQFVRSLES 222
           L +  + KP V T   LIQ    EG+   A ++   + EMG+ +  +V   F     L +
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL-QGNIVTYNFLIEGYLAA 445

Query: 223 R---------------GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           R               G  P+ ++Y++++  L  M        L  +M   G+ P V+ Y
Sbjct: 446 RKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDY 505

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L++SLCR+   E A  + +  +      D  S++ +I    K G +  A E L  M  
Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
              +PD V ++ ++  F K G  D+A+ ++EK+   G  P V  ++++       G+  +
Sbjct: 566 MDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCR 416
            + ++ +M  K +  D    +++++CLC 
Sbjct: 626 IISLLHQMADKDVVLDSKLTSTILACLCH 654



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 24/326 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           L+K    AGK  E++   + +++     KPDV  C  LI+   +E + + A R+   + +
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE 425

Query: 101 YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            G + ++  YN LI G+  A ++  A K+       GFSP+ +TY++MI  LC   M+  
Sbjct: 426 MGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSV 485

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A  +F ++     +PTVI Y  L+ +                  +C++  + QA    + 
Sbjct: 486 ARGLFCKMKDSGIRPTVIDYNALMTS------------------LCREDSLEQARSLFQE 527

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           + +     DV+S+N+++   L  G  +  ++L++EM    L P+ VT+SILI+   + G 
Sbjct: 528 MRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGM 587

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++A+ +       G  P    +D L+  Y   G  +  I  L  M     + D    +T
Sbjct: 588 LDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTST 647

Query: 340 ILAAFC---KNGNADQALEIFEKLSD 362
           ILA  C   +N + ++ L  F + S+
Sbjct: 648 ILACLCHMSRNLDVEKILPKFSQQSE 673



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 7/240 (2%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+    S LI +L +  + +  V V        + P   S   L  ++        A   
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS-DVGC-PPNVSSYNTMFSAL 379
           L  M   G   ++ N N +L  FC++G  D+A+ +F ++  +  C  P+  +YNT+ +  
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNG- 158

Query: 380 WSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +    ++    ++ E + KG    P+ +TY+ LI C C+ G V E +GLL +ME    + 
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG-WRAEAMEL 496
            V  Y+ +I  FC    I    E+   M  +   PN  TY  L++G+G  G WR EA E+
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWR-EASEM 277


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 239/500 (47%), Gaps = 22/500 (4%)

Query: 19  SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGK---FDESLYFIESMVANGCKPDVVMC 75
           S       NT+        TQF+  ++   ++GK    DE+L   + M +    P V   
Sbjct: 20  SKHCHCSTNTYDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDF 79

Query: 76  TKLIKKFFQERKSNKAVR-VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
           T L+    + +    A+  V  I    G E D    N +I+  C+   +     VL  + 
Sbjct: 80  TLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMF 139

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             G  P V+T   +I  LC +G +  A  + D + +      V TY +LI      G T 
Sbjct: 140 KLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTL 199

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            A++ L +M                 G+CK G+V +A      +  +G +P++++Y  L+
Sbjct: 200 AAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLI 259

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           + L N G+W+E   L+ EMI  G+  ++ T +IL+ + C++GK   A  V+      G  
Sbjct: 260 QGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEG 319

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD ++Y+ LI  YC   +++ A+     M+S GCLPDIV + +++  +CK+ N ++ + +
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHL 379

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            E+++ +G  P+V ++ T+      +G  + A  +   M   G  P+  T   ++  LC+
Sbjct: 380 LEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
             ++ EAV L   ME +     ++ Y+I++ G C   ++N + E+ +++  KG + N  T
Sbjct: 440 GNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYT 499

Query: 477 YVLLIEGIGYGGWRAEAMEL 496
           Y ++I+G+   G   +A +L
Sbjct: 500 YTIMIKGLCKQGSLDKAEDL 519



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 199/426 (46%), Gaps = 18/426 (4%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKAN 120
           +M   G +P V+  T LI     +    +AV +++ +EK   P DV+ Y  LI+G CK  
Sbjct: 137 TMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTG 196

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
               A + L ++  R + P+VV Y+ ++  LC  G++  A  +  ++     +P ++TY 
Sbjct: 197 DTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYA 256

Query: 181 ILIQATMLEGQTDKAMKLLDEM---GM--------------CKKGMVGQAFQFVRSLESR 223
            LIQ     G+  +   LLDEM   GM              CK+G V QA   +  +   
Sbjct: 257 CLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILT 316

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PDV +YN L+       K  E  ++   M+SRG  P++V ++ LI   C+D      
Sbjct: 317 GEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKV 376

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L    + G  PD  ++  LI  +C+ GR   A E    M   G +P++     IL  
Sbjct: 377 MHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK     +A+ + E +       N+  Y+ +   + S+G    A  + S +  KG++ +
Sbjct: 437 LCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQIN 496

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY  +I  LC+ G +D+A  LL++ME     P   +YN+ + G    + I  SI+ L 
Sbjct: 497 VYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLT 556

Query: 464 AMFEKG 469
            M +KG
Sbjct: 557 IMRDKG 562



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 23/367 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+L     M   G +P++V    LI+      +  +   +++ + K G   D+ 
Sbjct: 229 KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQ 288

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N L+  FCK  ++  A  V+  +   G  PDV TYN +I   C +  +  A +VF  +
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +   C P ++ +T LI     +   +K M LL+EM   K G V                P
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMA--KMGFV----------------P 390

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV+++  L+      G+    ++L   M   G  PN+ T ++++  LC+     +AV + 
Sbjct: 391 DVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLA 450

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            A ++  L  +   Y  L+   C  G+L+ A E    +   G   ++  Y  ++   CK 
Sbjct: 451 EAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQ 510

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD---- 403
           G+ D+A ++   + + GC P+  +YN     L +  +  R++  ++ M  KG   D    
Sbjct: 511 GSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATT 570

Query: 404 EITYNSL 410
           EIT N L
Sbjct: 571 EITINYL 577



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 18/305 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G++ E+   ++ M+  G + D+     L+  F +E K  +A  V+  +   G
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTG 317

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           E PDVF YN+LI  +C  N++  A +V   + SRG  PD+V +  +I   C    I    
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVM 377

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + +++ +    P V+T+T LI      G+   A +L   M                 G+
Sbjct: 378 HLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  ++ +A     ++E      +++ Y++LL  + + GK     +L + +  +GL+ NV
Sbjct: 438 CKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINV 497

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+I+I  LC+ G  + A D+L   +E G  PD  +Y+  +        +  +I++L  
Sbjct: 498 YTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTI 557

Query: 325 MISDG 329
           M   G
Sbjct: 558 MRDKG 562



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 6/248 (2%)

Query: 261 EPNVVTYSILISSLCRDGKT---EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
             N   + I + +LC+ GK    ++A+D+ +        P    +  L+    +      
Sbjct: 35  HSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTT 94

Query: 318 AIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           AI  + ++ S  G   D +  N ++   C+         +   +  +G  P V +   + 
Sbjct: 95  AISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALI 154

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           + L   G+  +A+G++  M       D  TY  LI+ LC+ G    AV  L  ME   ++
Sbjct: 155 NGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWK 214

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAME 495
           P V+ Y+ I+ G CK   ++E++ + + M  KG +PN  TY  LI+G+  +G W+ E   
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWK-ETGS 273

Query: 496 LANALVSM 503
           L + ++ M
Sbjct: 274 LLDEMIKM 281


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 221/488 (45%), Gaps = 56/488 (11%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKA---VRVMEILEKYGEPDVFAYNALISGFCKA 119
           +VA G +PD     K+++        + A   VR M   E    PD F+YN +I+G  ++
Sbjct: 148 LVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRS 207

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            +   A KV D +   G  P+ +TYN MI      G +E+ F++ DQ+L D  KP ++TY
Sbjct: 208 GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTY 267

Query: 180 TILIQATMLEGQTDKAMKLLDEM------------------------------------- 202
            +L+      G+ D+   L+DEM                                     
Sbjct: 268 NVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLK 327

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK G V +A Q +  L   G  P  + YN L+     +     
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              +  +M SR + P+ +TY+ LI+ LC+      A D++   ++ G+ P   +++ LI 
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 447

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           AY   G+L+     L  M   G   D++++ +++ AFCKNG   +A+ I + +      P
Sbjct: 448 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 507

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N   YN++  A   SGD  +A  ++ +M + G+    +TYN L+  LCR   +DEA  L+
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             + +   RP V+SYN II   C     ++++E+L  M + G +P   TY  L+  +   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627

Query: 488 GWRAEAME 495
           G R   ME
Sbjct: 628 G-RVHDME 634



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 236/486 (48%), Gaps = 25/486 (5%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           VR    +E  P     S++V       +I   +R+GK  ++L   + MV  G  P+ +  
Sbjct: 180 VRRMGRSEGAPPPDAFSYNV-------VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITY 232

Query: 76  TKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
             +I    +        R+  ++L    +P++  YN L+SG C+A +++    ++D + S
Sbjct: 233 NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS 292

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               PD  TY+I+   L   G   +   +F + L+        T +IL+     +G+  K
Sbjct: 293 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A ++L+ +                 G C+   +  AF     ++SR  +PD I+YN L+ 
Sbjct: 353 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L  +    + E L+ EM   G++P+V T++ LI +    G+ E    VL   ++KG+  
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  S+  ++ A+CK+G++  A+  LD MI     P+   YN+I+ A+ ++G+ +QA  + 
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 532

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           EK+ + G   ++ +YN +   L  S     A  +I  + ++G+ PD ++YN++IS  C  
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D+A+ LL +M     RPT+ +Y+ ++       R+++   +   M  K  +P+ + Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652

Query: 478 VLLIEG 483
            ++++ 
Sbjct: 653 GIMVDA 658



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 26/451 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P  ++++++V       L+    RAG+ DE+   ++ M ++   PD    + L     + 
Sbjct: 260 PKPNIVTYNV-------LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312

Query: 86  RKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +S   + +  E L+K      +  + L++G CK  ++  A +VL+ L   G  P  V Y
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N +I   C    +  AF +F+Q+   + +P  ITY  LI                   G+
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN------------------GL 414

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  MV +A   V  +E  G  P V ++N L+      G+ E+   ++++M  +G++ +V
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +++  ++ + C++GK  +AV +L     K + P+A  Y+ +I AY + G  + A   ++ 
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M + G    IV YN +L   C++   D+A E+   L + G  P+V SYNT+ SA  + GD
Sbjct: 535 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +AL ++ EM   GI P   TY++L+S L   G V +   L   M      P+   Y I
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           ++  + +    ++   +   M EKG   ++T
Sbjct: 655 MVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 21/417 (5%)

Query: 70  PDVVMCTKLIKKF-FQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           P +  C  L++   F  R ++       ++     PD FA+N ++     A  +++A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 129 LDRL-RSRGFSP-DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           + R+ RS G  P D  +YN++I  L   G    A KVFD+++     P  ITY  +I   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
           +  G  +   +L D+M                     G +P++++YN+LL  L   G+ +
Sbjct: 240 VKGGDLEAGFRLRDQM------------------LHDGPKPNIVTYNVLLSGLCRAGRMD 281

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   LM EM S  + P+  TYSIL   L R G++   + +   + +KG+   AY+   L+
Sbjct: 282 ETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILL 341

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  CKDG++  A + L+ ++  G +P  V YNT++  +C+  +   A  IFE++      
Sbjct: 342 NGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR 401

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+  +YN + + L       +A  ++ EM   G++P   T+N+LI      G +++   +
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV 461

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           L DM+    +  VIS+  ++  FCK  +I E++ +L  M  K   PN   Y  +I+ 
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 205/406 (50%), Gaps = 25/406 (6%)

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           + KA R    L +   PD++ +N +ISG C+  Q+  A  V   +++ G +P V TYN +
Sbjct: 175 AEKAFR--SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSL 232

Query: 148 IGSLCSRGMIESAFKVFDQLLRD----NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           I   C +G   + + V D LL++       PT +T+ +LI                   G
Sbjct: 233 IDGYCKKGGAGNMYHV-DMLLKEMVEAGISPTAVTFGVLIN------------------G 273

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CK      A +    ++ +G    V++YN L+  L + GK EEG KLM EM   GL PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            +T+  ++   C+ G   DA D +    E+ + PD   Y+ LI  Y + G+++ A+   +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G  P++  YN ++  F ++G+   A  + +++ + G   +V +YN +  AL   G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           +  +A+ ++ EM   G+EP+ +TYN++I   C  G +  A  +   ME  R R  V++YN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           + I  FC+  +++E+ ++L  M +K   PN  TY  + EG+   G+
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 195/401 (48%), Gaps = 21/401 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   + NAL++G   A +++LA K       R  SPD+ T+N +I  LC  G +  A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ---FVRSL 220
              +      P+V TY  LI                   G CKKG  G  +     ++ +
Sbjct: 214 AKDIKAWGLAPSVATYNSLID------------------GYCKKGGAGNMYHVDMLLKEM 255

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P  +++ +L+             ++  EM  +G+  +VVTY+ LIS LC +GK 
Sbjct: 256 VEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKV 315

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+ V ++   ++ GL+P+  ++  ++  +CK G +  A +++D M      PD+V YN +
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNIL 375

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  + + G  + A+ + E ++  G  PNV++YN + +    SGD   A G++ EM  KGI
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           E D +TYN LI  LC  G V +AV LL +M      P  ++YN II GFC    I  + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +   M +   + N  TY + I+     G   EA +L N ++
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 184/375 (49%), Gaps = 26/375 (6%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK---ANQIELA 125
           PD+     +I    +  +  KA  V + ++ +G  P V  YN+LI G+CK   A  +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + +L  +   G SP  VT+ ++I   C      +A +VF+++ +     +V+TY  LI  
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ ++ +KL++EM                 G CKKGM+  A  ++  +  R  +PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+ YN+L+     +GK E+   +   M  +G+ PNV TY+ LI+   R G    A  +L 
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             KEKG+  D  +Y+ LI A C  G +  A++ LD M   G  P+ + YNTI+  FC  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A EI  ++       NV +YN         G    A  +++EML K + P+ ITY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 409 SLISCLCRDGMVDEA 423
           ++     ++GM+++ 
Sbjct: 549 TI-----KEGMMEKG 558



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 10/273 (3%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +P   S N LL  L+   + +  EK     + R + P++ T++ +IS LCR G+   A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDG------RLDLAIEFLDYMISDGCLPDIVNYNT 339
           V +  K  GL P   +Y+ LI  YCK G       +D+    L  M+  G  P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGV 269

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  +CKN N   A+ +FE++   G   +V +YN++ S L S G     + ++ EM   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+EIT+  ++   C+ GM+ +A   +  M      P V+ YNI+I  + +  ++ +++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGG-WRA 491
            V  AM +KG  PN TTY  LI G    G WR+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 52/240 (21%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    R GK ++++   E+M   G  P+V                              
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVT----------------------------- 405

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 YN LI+GF ++     A+ +LD ++ +G   DVVTYN++IG+LC +G +  A K
Sbjct: 406 -----TYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D++     +P  +TY  +IQ                  G C KG +  A++    +E 
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQ------------------GFCDKGNIKSAYEIRTRMEK 502

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
              + +V++YN+ ++    +GK +E   L+ EM+ + L PN +TY  +   +   G T D
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI    R+G +  +   ++ M   G + DVV    LI     + +  KAV++++ 
Sbjct: 405 TTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + + G EP+   YN +I GFC    I+ A ++  R+       +VVTYN+ I   C  G 
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           ++ A  + +++L     P  ITY  + +  M +G T
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 207/406 (50%), Gaps = 22/406 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            +D     +  LI    ++G  D +   ++ M   GC P+VV  T LI    + R+ + A
Sbjct: 40  GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 99

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIG 149
           ++ ++ + + G EPD+  YN+LI G C AN+++ A  VL  L    G  PDVVTYN  I 
Sbjct: 100 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFIS 159

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G ++   ++ +++ R    P V+T+  +I                   G+CK   
Sbjct: 160 GLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIIS------------------GLCKANR 201

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  AFQ  + +  RGC PD ++Y+++L  L    + +  E+++  M+  G      TY+ 
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI +L R G  E A      A E G   + Y+++  I A C+ G+  LA   L  MI  G
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRA 388
            LP++++YN ++   CK+GN D A ++  K+ D G C P+V  +NT+ S    +G   +A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381

Query: 389 LGMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             ++ EM +K I  PD +TYN++I    + G + +A  LL +M++ 
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAV 427



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 209/416 (50%), Gaps = 20/416 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           D  +   LI    + RK   A+ ++ ++   G +  V  Y  LI G CK+  ++ A  +L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
            ++   G +P+VVTY  +I  LC       A +   ++LR  C+P ++TY  LI    + 
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
            + D A  +L E+ M + G +                PDV++YN  +  L   GK ++G 
Sbjct: 129 NRMDDAGLVLQEL-MIESGRI----------------PDVVTYNTFISGLCKAGKLDKGL 171

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +++ EM   G+ P+VVT+  +IS LC+  + +DA  V +   E+G  PD+ +Y  ++   
Sbjct: 172 EMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 231

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            +  RLD   E L++M+  G       Y  ++ A  + G+ + A   +E+  + GC   V
Sbjct: 232 SRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEV 291

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            ++N    AL  SG    A  ++  M+  G  P+ ++YN +I  LC+ G VD+A  L   
Sbjct: 292 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 351

Query: 430 M-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG-CKPNETTYVLLIEG 483
           M +S   +P VI +N +I GFCK  R++++ ++L  M  K  C P+  TY  +I+G
Sbjct: 352 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDG 407



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 20/394 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   YN LI+G CKA +   A ++L  + + G+   VVTY  +I  LC  G +++A  + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++    C P V+TYT LI                   G+CK      A Q V+ +   G
Sbjct: 69  QKMADAGCAPNVVTYTALID------------------GLCKARRPHDAIQTVKRMLRSG 110

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTE-MISRGLEPNVVTYSILISSLCRDGKTEDA 283
           C+PD+++YN L+  L    + ++   ++ E MI  G  P+VVTY+  IS LC+ GK +  
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKG 170

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           +++L      G++PD  ++  +IS  CK  R+D A +    M+  GC+PD + Y+ +L  
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 230

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             +    D   E+ E +   G     ++Y  +  AL  +GD   A     + +  G   +
Sbjct: 231 LSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVME 290

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             T+N+ I  LCR G    A  +L+ M  +   P ++SYN +I G CK+  ++++ ++  
Sbjct: 291 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 350

Query: 464 AMFEKG-CKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M + G CKP+   +  LI G    G  ++A +L
Sbjct: 351 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQL 384



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 178/347 (51%), Gaps = 23/347 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--I 97
           +  LI    +A +  +++  ++ M+ +GC+PD+V    LI       + + A  V++  +
Sbjct: 83  YTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELM 142

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +E    PDV  YN  ISG CKA +++   ++L+ +   G SPDVVT+  +I  LC    I
Sbjct: 143 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRI 202

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           + AF+VF  +L   C P  +TY+I++       + D   ++L+ M               
Sbjct: 203 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPL 262

Query: 203 --GMCKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              + + G +  A + + +++E+ GC  +V ++N  +  L   GK+   + ++  MI  G
Sbjct: 263 IHALIRAGDIESASWAYEQAMEA-GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLA 318
             PN+++Y+ +I  LC+ G  +DA  + R   + G   PD   ++ LIS +CK GRL  A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381

Query: 319 IEFLDYMISDG-CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
            + L  M +   C+PD+V YNT++    K G+  QA  + E++  VG
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 19/371 (5%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           + SR F  D   YN +I  LC       A ++   +  +    +V+TYT LI        
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLID------- 53

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G+CK G +  A   ++ +   GC P+V++Y  L+  L    +  +  + 
Sbjct: 54  -----------GLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 102

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK-EKGLTPDAYSYDPLISAYC 310
           +  M+  G EP++VTY+ LI  LC   + +DA  VL+    E G  PD  +Y+  IS  C
Sbjct: 103 VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLC 162

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K G+LD  +E L+ M   G  PD+V + +I++  CK    D A ++F+ + + GC P+  
Sbjct: 163 KAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y+ M   L  +        ++  M+  G      TY  LI  L R G ++ A       
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                   V ++N  I   C++ +   +  +L  M E G  PN  +Y  +I+G+   G  
Sbjct: 283 MEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 342

Query: 491 AEAMELANALV 501
            +A +L+  ++
Sbjct: 343 DDAWKLSRKML 353


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 55/508 (10%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  D     +  +I   F++G+  E+      MV  G   D+V CT ++   F+  K+ +
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  V E + K    P+   Y+AL+ G+CK  ++ELA  VL ++      P+V+T++ +I 
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
               +GM+  A  V  ++++ N  P  I Y ILI      G+ D A    D+        
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA----DD-------- 552

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                 F + ++SR  +   + +++LL  L  +G+ +E   L+ +M S+G++P++V Y+ 
Sbjct: 553 ------FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI    ++G    A+ +++  KEK +  D  +Y+ LI    + G+ D        MI  G
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELG 665

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PD + YNTI+  +C  G  + AL+I  ++   G  PN  +YN +   L  +G   +A 
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 725

Query: 390 GMISEMLSKGIEPDEIT-----------------------------------YNSLISCL 414
             + EML     P  IT                                   YN+LI+  
Sbjct: 726 SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVF 785

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           CR GM  +A  +L +M        +++YN +I G+C    + ++++  + MF  G  PN 
Sbjct: 786 CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNI 845

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
           TTY  L+ G+   G   E ME    LVS
Sbjct: 846 TTYNTLLGGLSNAGLMEEMMEETEKLVS 873



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 197/406 (48%), Gaps = 24/406 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVF 107
           R G+ DE+   I  M + G  PD+V    LI  +F+E     A+  V E+ EK    DV 
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYNALI G  +  + +    V  R+   G +PD +TYN +I + C +G  E A  + +++
Sbjct: 638 AYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  +TY ILI      G  +KA   LDEM            +FV         P
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM---------LVMEFV---------P 738

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             I++  L++      K ++  ++  ++++ GLE ++  Y+ LI+  CR G T  A  VL
Sbjct: 739 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVL 798

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G++ D  +Y+ LI  YC    ++ A++    M  DG  P+I  YNT+L      
Sbjct: 799 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNA 858

Query: 348 G----NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           G      ++  ++  ++++ G  PN ++Y+ + S     G++ + + +  EM++KG  P 
Sbjct: 859 GLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPT 918

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
             TYN LIS   + G + EA  LL D+ +    P   +Y+I+  G+
Sbjct: 919 LKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 964



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 227/492 (46%), Gaps = 58/492 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + GK + +   ++ M      P+V+  + +I  + ++   +KAV V+ E++++   P+  
Sbjct: 473 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 532

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G+ KA + ++A+     ++SR      V ++I++ +L   G ++ A  +   +
Sbjct: 533 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 592

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P ++ Y  LI     EG    A+ ++ EM                 G+ + G  
Sbjct: 593 YSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY 652

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
              +   R +E  G  PD I+YN ++ T    GK E+   ++ EM S G+ PN VTY+IL
Sbjct: 653 DPRYVCSRMIE-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711

Query: 271 ISSLCRDGKTEDA-------------------------------VDVLRAAKEK----GL 295
           I  LC+ G  E A                                D +    EK    GL
Sbjct: 712 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 771

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                 Y+ LI+ +C+ G    A   LD M+  G   D+V YN ++  +C   + ++AL+
Sbjct: 772 ELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 831

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSG----DKIRALGMISEMLSKGIEPDEITYNSLI 411
            + ++   G  PN+++YNT+   L ++G           ++SEM  +G+ P+  TY+ L+
Sbjct: 832 TYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           S   R G   + + L ++M +  F PT+ +YN++I  + K+ ++ E+ E+L  +  KG  
Sbjct: 892 SGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI 951

Query: 472 PNETTYVLLIEG 483
           PN  TY +L  G
Sbjct: 952 PNSFTYDILTCG 963



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 37/488 (7%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    + G  D+    +  MV  G   D + C  L+K + +      A  
Sbjct: 159 DIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEW 218

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           VM  L   G   DV   N LI G+C+A  +  A ++++         D+VTYN ++ + C
Sbjct: 219 VMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFC 278

Query: 153 SRGMIESAFKVFDQLL---RD----------------NCKPTVITYTILIQATMLEGQTD 193
             G +  A  +F+++L   +D                N +PT++TYT LI A       +
Sbjct: 279 KTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           ++  L  +M                 G C+ G + +A    R +   G  P+ +SY  ++
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
            +L   G+  E   L ++M+ RG+  ++VT + ++  L + GKT++A +V     +  L 
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  L+  YCK G+++LA   L  M  +   P+++ +++I+  + K G   +A+++
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++      PN   Y  +    + +G++  A     EM S+ +E   + ++ L++ L R
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +DEA  L++DM S    P +++Y  +I G+ K      ++ ++  M EK  + +   
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA 638

Query: 477 YVLLIEGI 484
           Y  LI+G+
Sbjct: 639 YNALIKGL 646



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 229/519 (44%), Gaps = 96/519 (18%)

Query: 28  THL-LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           THL +SF      F  LI+      +F  +      M A G  P +     L+ +F    
Sbjct: 55  THLYVSF------FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQF---- 104

Query: 87  KSNKAVRVMEILEKYGE-------PDVFAYNALISGFCKANQIELANKVLDRLRSRGF-S 138
             N +  V ++   Y +       PDVF+ N L+   CK   ++LA   L  LR+     
Sbjct: 105 --NASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA---LGYLRNNDVVD 159

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            D VTYN +I   C +G+++  F +  ++++       IT  IL++              
Sbjct: 160 IDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVK-------------- 205

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+ G+V  A   + +L   G   DVI  N L+      G   +  +L+      
Sbjct: 206 ----GYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRS 261

Query: 259 GLEPNVVTYSILISSLCRDG----------------KTEDAV---DVLRAAKEKGLTPDA 299
            ++ ++VTY+ L+ + C+ G                K ED +   DV+   + K L P  
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y  LI+AYCK   ++ +      MI +G +PD+V  ++IL  FC++G   +A  +F +
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE------------------ 401
           + ++G  PN  SY T+ ++L+ SG  + A  + S+M+ +GI                   
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 402 -----------------PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
                            P+ +TY++L+   C+ G ++ A  +L  ME     P VI+++ 
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           II G+ K   ++++++VL  M ++   PN   Y +LI+G
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 221/451 (49%), Gaps = 24/451 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI    R G+ +E    +  M   G   D   CT +++ F Q+ +      +   +L
Sbjct: 188 FRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRML 247

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P+V  Y A I G CK   ++ A  VL+ + ++G  P+V T+  +I  LC  G  E
Sbjct: 248 EMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTE 307

Query: 159 SAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            AF++F +L++ +  KP V TYT++I                   G CK+G + +A   +
Sbjct: 308 RAFRLFLKLIKSSSYKPNVHTYTVMIG------------------GYCKEGKLARAEMLL 349

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +  +G  P+  +Y  L+      G +    +LM +M   G +PN+ TY+ LI  LC+ 
Sbjct: 350 GRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKK 409

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++A  VLR A  +GL  D  +Y  +I+ +CK G +  A++  + M  +GC PDI  Y
Sbjct: 410 GKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTY 469

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++A +C+    +++ ++F+K   +   P   +Y +M +     G    AL +   M+ 
Sbjct: 470 TTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQ 529

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G + D ITY +LIS LC++  ++EA  L   M   R  P  ++   +   +C+  +   
Sbjct: 530 NGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVV 589

Query: 458 SIEVLAAMFEKGCKPNETTYVLL--IEGIGY 486
           ++ +L  + ++  + N T  VL+  +  IG+
Sbjct: 590 AVSILDRLDKR--RKNHTVNVLVRKLSAIGH 618



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 186/382 (48%), Gaps = 19/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  ++ ALI G C+  ++E  + +L  ++ +GF  D  T  +++   C +G      ++
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++L     P V+ YT  I                   G+CK+  V QAF  +  + ++
Sbjct: 243 FRRMLEMGTPPNVVNYTAWID------------------GLCKRAYVKQAFYVLEEMVAK 284

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTED 282
           G +P+V ++  L+  L  +G  E   +L  ++I S   +PNV TY+++I   C++GK   
Sbjct: 285 GLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +L    E+GL P+  +Y  LIS +CK+G  + A E ++ M  +G  P+I  YN ++ 
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID 404

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK G   +A ++    ++ G   +  +Y  M +     G    AL + + M   G  P
Sbjct: 405 GLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D  TY +LI+  C+   ++E+  L     +    PT  +Y  +I G+CK  +   ++ V 
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF 524

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M + GC+ +  TY  LI G+
Sbjct: 525 ERMVQNGCQADSITYGALISGL 546



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 19/413 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A   +++ F +A ++  A  ++  +RS G    V T N ++ +    G    A KVFD +
Sbjct: 116 AMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGM 175

Query: 168 L-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGM 209
           + R    P   ++  LI     +G+ ++   LL  M                   C+KG 
Sbjct: 176 VTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGR 235

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                +  R +   G  P+V++Y   +  L      ++   ++ EM+++GL+PNV T++ 
Sbjct: 236 FRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTS 295

Query: 270 LISSLCRDGKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           LI+ LC+ G TE A  + L+  K     P+ ++Y  +I  YCK+G+L  A   L  M+  
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 355

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+   Y T+++  CK G+ + A E+  K+   G  PN+ +YN +   L   G    A
Sbjct: 356 GLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             ++    ++G++ D++TY  +I+  C+ G +  A+ L   M      P + +Y  +I  
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIAR 475

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +C+ R++ ES ++          P + TY  +I G    G    A+ +   +V
Sbjct: 476 YCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMV 528


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 201/396 (50%), Gaps = 23/396 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L +   PD++ +N +ISG C+  Q+  A  V   +++ G +P V TYN +I   C +G  
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 158 ESAFKVFDQLLRD----NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            + + V D LL++       PT +T+ +LI                   G CK      A
Sbjct: 243 GNMYHV-DMLLKEMVEAGISPTAVTFGVLIN------------------GYCKNSNTAAA 283

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G    V++YN L+  L + GK EEG KLM EM   GL PN +T+  ++  
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+ G   DA D +    E+ + PD   Y+ LI  Y + G+++ A+   + M   G  P+
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN ++  F ++G+   A  + +++ + G   +V +YN +  AL   G+  +A+ ++ 
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM   G+EP+ +TYN++I   C  G +  A  +   ME  R R  V++YN+ I  FC+  
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           +++E+ ++L  M +K   PN  TY  + EG+   G+
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 195/401 (48%), Gaps = 21/401 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   + NAL++G   A +++LA K       R  SPD+ T+N +I  LC  G +  A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ---FVRSL 220
              +      P+V TY  LI                   G CKKG  G  +     ++ +
Sbjct: 214 AKDIKAWGLAPSVATYNSLID------------------GYCKKGGAGNMYHVDMLLKEM 255

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P  +++ +L+             ++  EM  +G+  +VVTY+ LIS LC +GK 
Sbjct: 256 VEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKV 315

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+ V ++   ++ GL+P+  ++  ++  +CK G +  A +++D M      PD+V YN +
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNIL 375

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  + + G  + A+ + E ++  G  PNV++YN + +    SGD   A G++ EM  KGI
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           E D +TYN LI  LC  G V +AV LL +M      P  ++YN II GFC    I  + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +   M +   + N  TY + I+     G   EA +L N ++
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 183/384 (47%), Gaps = 21/384 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK---ANQIELA 125
           PD+     +I    +  +  KA  V + ++ +G  P V  YN+LI G+CK   A  +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + +L  +   G SP  VT+ ++I   C      +A +VF+++ +     +V+TY  LI  
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ ++ +KL++EM                 G CKKGM+  A  ++  +  R  +PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+ YN+L+     +GK E+   +   M  +G+ PNV TY+ LI+   R G    A  +L 
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             KEKG+  D  +Y+ LI A C  G +  A++ LD M   G  P+ + YNTI+  FC  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A EI  ++       NV +YN         G    A  +++EML K + P+ ITY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 409 SLISCLCRDGMVDEAVGLLVDMES 432
           ++   +   G   +  G  V   S
Sbjct: 549 TIKEGMMEKGYTPDIRGCTVSQAS 572



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 10/273 (3%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +P   S N LL  L+   + +  EK     + R + P++ T++ +IS LCR G+   A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDG------RLDLAIEFLDYMISDGCLPDIVNYNT 339
           V +  K  GL P   +Y+ LI  YCK G       +D+    L  M+  G  P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGV 269

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  +CKN N   A+ +FE++   G   +V +YN++ S L S G     + ++ EM   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+EIT+  ++   C+ GM+ +A   +  M      P V+ YNI+I  + +  ++ +++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGG-WRA 491
            V  AM +KG  PN TTY  LI G    G WR+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 52/240 (21%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    R GK ++++   E+M   G  P+V                              
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVT----------------------------- 405

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 YN LI+GF ++     A+ +LD ++ +G   DVVTYN++IG+LC +G +  A K
Sbjct: 406 -----TYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D++     +P  +TY  +IQ                  G C KG +  A++    +E 
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQ------------------GFCDKGNIKSAYEIRTRMEK 502

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
              + +V++YN+ ++    +GK +E   L+ EM+ + L PN +TY  +   +   G T D
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI    R+G +  +   ++ M   G + DVV    LI     + +  KAV++++ 
Sbjct: 405 TTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + + G EP+   YN +I GFC    I+ A ++  R+       +VVTYN+ I   C  G 
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           ++ A  + +++L     P  ITY  + +  M +G T
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 223/450 (49%), Gaps = 19/450 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI+  +  GK  E+L+  + M+  G +PDVV    LI    +   ++ A+R++  ++
Sbjct: 134 FTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 193

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  +P+VFAYN +I   CK  Q+  A  +   + ++G SPD+ TYN +I +LC+    +
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               + ++++     P V+++  ++ A                  +CK+G V +A   V 
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDA------------------LCKEGKVTEAHDVVD 295

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V++Y  L+     + + +E  K+   M+ +G  PNV++Y+ LI+  C+  
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A+ +      + L PD  +Y  LI   C   RL  AI     M++   +P++V Y 
Sbjct: 356 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            +L   CKN    +A+ + + +      P++   N     +  +G+   A  + S + SK
Sbjct: 416 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G++PD  TY+ +I+ LCR G++DEA  L  +M+          YN I  GF +    + +
Sbjct: 476 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 535

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           I++L  M  +G   + +T  L ++ +   G
Sbjct: 536 IQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 225/458 (49%), Gaps = 19/458 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D ++     M+     P  V   KL+    + +  +  + +   ++ +G  P
Sbjct: 35  KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +++  + LI+ FC  N++  A  VL ++   G  PD  T+  +I  +   G I  A  +F
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D+++ +  +P V+TY  LI                   G+CK G    A + + S+  + 
Sbjct: 155 DKMIGEGFRPDVVTYGTLIN------------------GLCKVGNTSAAIRLLGSMVQKN 196

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           CQP+V +YN ++ +L    +  E   L +EM+++G+ P++ TY+ LI +LC   + +   
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +L    +  + PD  S++ ++ A CK+G++  A + +D MI  G  P++V Y  ++   
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C     D+A+++F+ +   GC PNV SYNT+ +         +A+ +  EM  + + PD 
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 376

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY++LI  LC    + +A+ L  +M +    P +++Y I++   CK R + E++ +L A
Sbjct: 377 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 436

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +      P+     + I+G+   G    A +L + L S
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 217/484 (44%), Gaps = 24/484 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F KL+    +       L     M + G  P++     LI  F    +   A  V+  + 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD   +  LI G     +I  A  + D++   GF PDVVTY  +I  LC  G   
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++   +++ NC+P V  Y  +I +   + Q  +A  L  EM    KG+    F +  
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM--VTKGISPDIFTY-N 240

Query: 219 SLESRGCQ--------------------PDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           SL    C                     PDV+S+N ++  L   GK  E   ++ +MI R
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+EPNVVTY+ L+   C   + ++AV V      KG  P+  SY+ LI+ YCK  R+D A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +     M     +PD V Y+T++   C       A+ +F ++      PN+ +Y  +   
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +     A+ ++  +    ++PD    N  I  +CR G ++ A  L  ++ S   +P 
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V +Y+I+I G C+   ++E+ ++   M E GC  N   Y  +  G       + A++L  
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540

Query: 499 ALVS 502
            +V+
Sbjct: 541 EMVA 544



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 185/396 (46%), Gaps = 18/396 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            ++N   S     N I+ A    +R+      P  V +N ++ S+       +   +  Q
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +      P + T  ILI +                   C    VG AF  +  +   G Q
Sbjct: 87  MDSFGIPPNIYTLHILINS------------------FCHLNRVGFAFSVLAKILKLGHQ 128

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD  ++  L+R +   GK  E   L  +MI  G  P+VVTY  LI+ LC+ G T  A+ +
Sbjct: 129 PDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L +  +K   P+ ++Y+ +I + CKD ++  A      M++ G  PDI  YN+++ A C 
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                    +  ++ D    P+V S+NT+  AL   G    A  ++ +M+ +G+EP+ +T
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +L+   C    +DEAV +   M      P VISYN +I G+CK +RI++++ +   M 
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 368

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +   P+  TY  LI G+ +     +A+ L + +V+
Sbjct: 369 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 18/255 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYN 110
           + DE++   ++MV  GC P+V+    LI  + + ++ +KA+ +  E+  +   PD   Y+
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 380

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            LI G C   +++ A  +   + +    P++VTY I++  LC    +  A  +   +   
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           N  P +    I I      G+ + A  L   +                 G+C++G++ +A
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  R ++  GC  +   YN + R  L   +     +L+ EM++RG   +  T ++ +  
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560

Query: 274 LCRDGKTEDAVDVLR 288
           L  DG  +    +LR
Sbjct: 561 LSDDGLDQSLKQILR 575



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+ + +     ++ + G +PDV   + +I    +    ++A ++   +++ G   +  
Sbjct: 458 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 517

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +  GF + N+   A ++L  + +RGFS D  T  + +  L   G+ +S      Q+
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS----LKQI 573

Query: 168 LRD 170
           LR+
Sbjct: 574 LRE 576


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 226/464 (48%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A G  P V+    ++    +  K ++A+RV E ++K   P++  Y
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTY 380

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+A +++ A ++ D ++  G  P+V T NIM+  LC    ++ A  +F+Q+  
Sbjct: 381 NILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDY 440

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  IT+  LI      G+ D A K+ ++M                      G    
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + + ++ C PD+   N  +  +   G+ E+G  +  E+ SR   P+  +YSILI 
Sbjct: 501 GHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIH 560

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +  ++  + KE+G   D  +Y+ +I  +CK G+++ A + L+ M + G  P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+        NV  Y+++       G    A  ++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P  ++Y I+I G CK 
Sbjct: 681 EELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M ++G KP+  +Y  +I G+   G  AEA  L
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 230/474 (48%), Gaps = 19/474 (4%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           ++++    +A K  E    +++M     +P     T LI  F     S+  + + + +++
Sbjct: 137 IEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196

Query: 101 YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            G EP V  +  LI GF K  +++ A  +LD ++S     D+V YN+ I S    G ++ 
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------M 202
           A+K F ++  +  KP  +TYT +I       + D+A+++ +                  M
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G    G   +A+  +    ++G  P VI+YN +L  L  MGK +E  ++  EM  +   P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAP 375

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N+ TY+ILI  LCR GK + A ++  + ++ GL P+  + + ++   CK  +LD A    
Sbjct: 376 NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIF 435

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M    C PD + + +++    K G  D A +I+EK+ D  C  N   Y ++    ++ 
Sbjct: 436 EQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNH 495

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G K     +  +M+++   PD    N+ + C+ + G  ++   +  +++S RF P   SY
Sbjct: 496 GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSY 555

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I+I G  K    NE+ E+  +M E+GC  +   Y ++I+G    G   +A +L
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 209/446 (46%), Gaps = 20/446 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + GK D +  F   + ANG KPD V  T +I    +  + ++AV + E LEK    P  +
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN +I G+  A + + A  +L+R R++G  P V+ YN ++  L   G ++ A +VF+++
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +D   P + TY ILI                    +C+ G +  AF+   S++  G  P
Sbjct: 370 KKD-AAPNLSTYNILIDM------------------LCRAGKLDCAFELRDSMQKAGLFP 410

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V + N+++  L    K +E   +  +M  +   P+ +T+  LI  L + G+ +DA  + 
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIY 470

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +     ++  Y  LI  +   GR +   +    M++  C PD+   NT +    K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKA 530

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++   +FE++      P+  SY+ +   L  +G       +   M  +G   D   Y
Sbjct: 531 GEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I   C+ G V++A  LL +M++  F PTV++Y  +I G  K  R++E+  +      
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  + N   Y  LI+G G  G   EA
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEA 676



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 183/387 (47%), Gaps = 19/387 (4%)

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           KAN++     V+  +R   F P    Y  +IG+  +    +    +F Q+     +PTV 
Sbjct: 145 KANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            +T LI+    EG+ D A+ LLDEM                  +S     D++ YN+ + 
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEM------------------KSSSLDADIVLYNVCID 246

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           +   +GK +   K   E+ + GL+P+ VTY+ +I  LC+  + ++AV++    ++    P
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
             Y+Y+ +I  Y   G+ D A   L+   + G +P ++ YN IL    K G  D+AL +F
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVF 366

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           E++      PN+S+YN +   L  +G    A  +   M   G+ P+  T N ++  LC+ 
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             +DEA  +   M+     P  I++  +I G  K  R++++ ++   M +  C+ N   Y
Sbjct: 426 QKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVY 485

Query: 478 VLLIEGIGYGGWRAEAMELANALVSMH 504
             LI+     G + +  ++   +V+ +
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMVNQN 512



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 188/406 (46%), Gaps = 18/406 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVM 95
           E  F  LI    + G+ D++    E M+ + C+ + ++ T LIK FF   RK +      
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++ +   PD+   N  +    KA + E    + + ++SR F PD  +Y+I+I  L   G
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
                +++F  +    C      Y I+I      G+ +KA +LL+EM             
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+ K   + +A+      +S+  + +V+ Y+ L+     +G+ +E   ++ E++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL PNV T++ L+ +L +  +  +A+   ++ KE   TP+  +Y  LI+  CK  + + A
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
             F   M   G  P  ++Y T+++   K GN  +A  +F++    G  P+ + YN M   
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           L +    + A  +  E   +G+     T   L+  L ++  +++A 
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAA 852



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 1/269 (0%)

Query: 210 VGQAFQFVRSLESRGCQPDVI-SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           V +A ++ R  E R   P    SYN LL  +     ++  ++++ EM   G  P+V T  
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++ S  +  K  +  DV++  ++    P   +Y  LI A+      D+ +     M   
Sbjct: 138 EMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P +  + T++  F K G  D AL + +++       ++  YN    +    G    A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                E+ + G++PDE+TY S+I  LC+   +DEAV +   +E  R  P   +YN +I+G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTY 477
           +    + +E+  +L     KG  P+   Y
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAY 346



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 18/264 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           + GK +++   +E M   G +P VV    +I    +  + ++A  + E  + K  E +V 
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y++LI GF K  +I+ A  +L+ L  +G +P+V T+N ++ +L     I  A   F  +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P  +TY ILI       + +KA     EM                 G+ K G +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A       ++ G  PD   YN ++  L N  +  +   L  E   RGL  +  T  +L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVL 838

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKG 294
           + +L ++   E A  V    +E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 197/407 (48%), Gaps = 19/407 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + +  +   A  V+ ++   G  P +   NAL+    +A+ + L  KV + +   G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
            SPDV TY+ +I + C     ++A KV  ++    C    +TY +LI             
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA------------ 160

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+ G V +AF F + +E  G  PD  +Y  L+  L    +  E + L+ EM 
Sbjct: 161 ------GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 214

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
              L+PNVV Y+ LI    R+G  ++A  +++     G+ P+  +YD L+   CK G++D
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 274

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  M+ D   PD + YN I+    ++ N   A  +  ++ + G  PNV +Y+ M 
Sbjct: 275 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L  SG+  +A  ++ EM +KG++P+   Y  LIS  CR+G V  A  +   M      
Sbjct: 335 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 394

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P +  YN +I G  K  R+ ES +  A M E+G  PNE TY  LI G
Sbjct: 395 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 248/586 (42%), Gaps = 124/586 (21%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+  ++   +  M   G  P +  C  L+K   +        +V E +   G  PDV+
Sbjct: 59  KSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 118

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF------ 161
            Y+ LI  +CK  + + A KVL  +R RG   + VTYN++I  LC  G +E AF      
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178

Query: 162 -----------------------------KVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
                                         + D++     KP V+ Y  LI   M EG  
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQA---------------------- 213
           D+A K++ EM                 G+CK G + +A                      
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 214 -------------FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
                        F+ +  +E+ G  P+V +Y++++  L   G+ E+   L+ EM ++GL
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +PN   Y+ LIS  CR+G    A ++     +  + PD Y Y+ LI    K GR++ + +
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN------------ 368
           +   M   G LP+   Y+ ++  + KNG+ + A ++ +++ D G  PN            
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 369 -------VSS----------------YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
                  VSS                Y  +   L SSG+   A  ++SE+   G  PD  
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+SLIS LC+    ++A G+L +M      P ++ YN +I G CK+  I+ +  V  ++
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             KG  PN  TY  LI+G    G  + A  L N +++   I+ D F
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-GITPDAF 643



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 241/542 (44%), Gaps = 66/542 (12%)

Query: 7   CINPKSNERVRV---SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C + +SNE   +    S AE +PN            +  LI    R G  DE+   I+ M
Sbjct: 198 CKSRRSNEAKALLDEMSCAELKPNV---------VVYANLIDGFMREGNADEAFKMIKEM 248

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQI 122
           VA G +P+ +    L++   +  + ++A  ++ +++     PD   YN +I G  + +  
Sbjct: 249 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNK 308

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A ++L  + + G SP+V TY+IMI  LC  G  E A  + +++     KP    Y  L
Sbjct: 309 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 368

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I     EG    A ++ D+M                 G+ K G V ++ ++   ++ RG 
Sbjct: 369 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 428

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY------------------ 267
            P+  +Y+ L+   L  G  E  E+L+  M+  GL+PN V Y                  
Sbjct: 429 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 488

Query: 268 -----------------SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                             ILI +L   G  E A  VL   ++ G  PD + Y  LIS  C
Sbjct: 489 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLC 548

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K    + A   LD M   G  P+IV YN ++   CK+G+   A  +F  +   G  PN  
Sbjct: 549 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 608

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y ++       GD   A  + +EML+ GI PD   Y+ L +     G +++A+ L+ +M
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
              R   ++ S+N ++ GFCK  ++ E++++L  +  +G  PN  T   +I G+   G  
Sbjct: 669 -FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727

Query: 491 AE 492
           +E
Sbjct: 728 SE 729



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 231/497 (46%), Gaps = 18/497 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++ + +E+   ++ M     KP+VV+   LI  F +E  +++A ++++ + 
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+   Y+ L+ G CK  Q++ A+ +L ++      PD +TYN++I         +
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++  ++      P V TY+I+I      G+ +KA  LL+EM                
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C++G V  A +    +      PD+  YN L+  L  +G+ EE  K   +M  RGL 
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  TYS LI    ++G  E A  +++   + GL P+   Y  L+ +Y K   ++     
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+  G + D   Y  ++     +GN + A  +  ++   G  P+V  Y+++ S L  
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + D+ +A G++ EM  KG++P+ + YN+LI  LC+ G +  A  +   + +    P  ++
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 609

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y  +I G CK   I+ +  +   M   G  P+   Y +L  G    G   +AM L   + 
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669

Query: 502 SMHAISRDTFKRLNRTF 518
                S  +F  L   F
Sbjct: 670 LRGHASISSFNNLVDGF 686



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--GMCKK 207
           S+C+  +   A  +  +++R    P V+  +I      L     ++  +LD +     K 
Sbjct: 4   SMCAGSLFNLANGLLIKMIRAYPSPPVVLASI---HRALSDSGHRSPAVLDVLVDTYKKS 60

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G V  A + V  +  RG  P +   N LL+ LL         K+   M+  G+ P+V TY
Sbjct: 61  GRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTY 120

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S LI + C+  + + A  VL   +E+G   +  +Y+ LI+  C+ G ++ A  F   M  
Sbjct: 121 STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 180

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G +PD   Y  ++   CK+  +++A  + +++S     PNV  Y  +       G+   
Sbjct: 181 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 240

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  MI EM++ G++P++ITY++L+  LC+ G +D A  LL  M     RP  I+YN+II 
Sbjct: 241 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 300

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G  +     ++  +L+ M   G  PN  TY ++I G+   G   +A +L
Sbjct: 301 GHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 207/492 (42%), Gaps = 72/492 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           ++G+ +++   +E M   G KP+  +   LI  + +E   + A  + + + K    PD++
Sbjct: 339 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 398

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G  K  ++E + K   +++ RG  P+  TY+ +I      G +ESA ++  ++
Sbjct: 399 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    KP  + Y  L+++       +K       M                  +   G +
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+ +  +E  G  PDV  Y+ L+  L      E+   ++ EM  +G++PN+V Y+ L
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 578

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ G    A +V  +   KGL P+  +Y  LI   CK G +  A    + M++ G 
Sbjct: 579 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 638

Query: 331 LPD----------------------------------IVNYNTILAAFCKNGNADQALEI 356
            PD                                  I ++N ++  FCK G   + L++
Sbjct: 639 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKL 698

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL------ 410
              +   G  PN  +   + S L  +G       +  E+  K  E     ++SL      
Sbjct: 699 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 758

Query: 411 ------------ISCLCRDGMVDEAVGLLVDMESTRFRPT-VISYNIIILGFCKTRRINE 457
                       I   C++G +D+A+ +L D+   +  P    SY  I+   C+  +++E
Sbjct: 759 QGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 817

Query: 458 SIEVLAAMFEKG 469
           ++ +L  M ++G
Sbjct: 818 ALNLLKEMDKRG 829



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 168/383 (43%), Gaps = 39/383 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++ L++  F++   ++     +SM+  G   D  +   LI           A RV+  +E
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  Y++LISG CK    E A  +LD +  +G  P++V YN +I  LC  G I 
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VF+ +L     P  +TYT LI  +   G    A  L +EM                
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G    G + QA   +  +  RG    + S+N L+      GK +E  KL+  ++ RGL 
Sbjct: 650 TGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLV 708

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN +T   +IS L   GK  +   +    ++K     A  +  L               F
Sbjct: 709 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL---------------F 753

Query: 322 LDYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
           +D MI+ G +P D+V  + ++   CK GN D+AL + + +     P   SSY  +   L 
Sbjct: 754 MD-MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC 810

Query: 381 SSGDKIRALGMISEMLSKG-IEP 402
             G    AL ++ EM  +G ++P
Sbjct: 811 RKGKLSEALNLLKEMDKRGNLQP 833



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 5/230 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI  S + G    + Y    M+A G  PD  + + L           +A+ ++E + 
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
             G   + ++N L+ GFCK  +++   K+L  +  RG  P+ +T   +I  L   G +  
Sbjct: 670 LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 729

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--GMCKKGMVGQAFQFV 217
              +F +L +   +     ++ L    + +G+    + ++D+M    CK+G + +A    
Sbjct: 730 VHTIFVELQQKTSESAARHFSSLFMDMINQGKI--PLDVVDDMIRDHCKEGNLDKALMLR 787

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVT 266
             + ++       SY  ++  L   GK  E   L+ EM  RG L+P +V 
Sbjct: 788 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 233/477 (48%), Gaps = 55/477 (11%)

Query: 65  ANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIE 123
            +GC PDVV  T +I   F E + +KA  +  E+++K   P+V  YN+++   CKA  ++
Sbjct: 265 GDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMD 324

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  VL ++      PD VTY  MI      G  + A K+F ++ R+   P ++T+  L+
Sbjct: 325 KAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLM 384

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
            +                  +CK     +A +   S+ ++G +PD+ISY++LL      G
Sbjct: 385 DS------------------LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426

Query: 244 KW-----------------------------------EEGEKLMTEMISRGLEPNVVTYS 268
           ++                                   +E   + TEM  +G+ PNVVTY+
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I++LCR G+  DA++ L      GL P+   Y  LI  +C  G L  A E +  M+  
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 329 GC-LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           G   P+I  +++I+ + C  G    A ++F  +  +G  P++ ++N++       G   +
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A G++  M+S G EPD +TY++LI+   + G +D+ + L  +M   R +PT ++Y++++ 
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLD 666

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           G  +  R + + ++   M E G   + +TY ++++G+       EA+ L + L +M+
Sbjct: 667 GLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 252/522 (48%), Gaps = 61/522 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RA + D    F   ++  G + D ++    +K     +++++A+ ++  L +  E    P
Sbjct: 177 RARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML--LHRMSELGCVP 234

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           D F+YN +I   C  ++ + A  +L R+ +  G SPDVV+Y ++I  L   G I  A  +
Sbjct: 235 DAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNL 294

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F+++++    P V+TY  ++ A       DKA  +L +M                 G   
Sbjct: 295 FNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSC 354

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G   +A +  + +   G  PD++++N L+ +L    + +E  ++   + ++G +P++++
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           YSIL+     +G+  D  ++  +  + G+  D++ ++ LI+A+ K G +D A+     M 
Sbjct: 415 YSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMR 474

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P++V Y T++AA C+ G    A+E   ++  +G  PN   Y+++     + GD I
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLI 534

Query: 387 RALGMISEMLSKGI------------------------------------EPDEITYNSL 410
           +A  ++SEM+ +GI                                     PD  T+NSL
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I   C  G +D+A G+L  M S    P V++Y+ +I G+ K+ RI++ + +   M  K  
Sbjct: 595 IDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV 654

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV-SMHAISRDTF 511
           KP   TY L+++G+   G  + A ++ + ++ S  A+S  T+
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTY 696



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 214/452 (47%), Gaps = 20/452 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S    E  +  +I      G++ E+    + M   G  PD+V    L+    + ++S +A
Sbjct: 337 SIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEA 396

Query: 92  VRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             +   I  K  +PD+ +Y+ L+ G+    +    N +   +   G   D   +NI+I +
Sbjct: 397 AEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINA 456

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
              RGM++ A  +F ++      P V+TY  +I A                  +C+ G +
Sbjct: 457 HAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAA------------------LCRMGRL 498

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSI 269
             A + +  + S G +P+ + Y+ L++     G   + ++L++EM+ +G+  PN+  +S 
Sbjct: 499 ADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSS 558

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I SLC +G+  +A DV       G  PD ++++ LI  YC  G++D A   LD M+S G
Sbjct: 559 IIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAG 618

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PD+V Y+T++  + K+G  D  L +F ++      P   +Y+ +   L+ +G    A 
Sbjct: 619 TEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            M  EM+  G      TY  ++  LCR+   DEA+ L   + +   +  +   N +I   
Sbjct: 679 KMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            K +R  E+ ++ A++   G  PN +TY ++I
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMI 770



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 187/397 (47%), Gaps = 18/397 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y  L+   C+A + +L      RL   G   D +  N  +  LC     + A  +  
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
             + +  C P   +Y  +I++     ++ +A+ +L                 +R  +  G
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDML-----------------LRMTKGDG 267

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PDV+SY M++  L   G+  +   L  EM+ +G+ PNVVTY+ ++ +LC+    + A 
Sbjct: 268 CSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAE 327

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            VLR   +  + PD  +Y  +I  Y   GR   A +    M  +G +PDIV +N+++ + 
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+  + +A EIF  ++  G  P++ SY+ +     + G  +    +   M   GI  D 
Sbjct: 388 CKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADS 447

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             +N LI+   + GM+DEA+ +  +M      P V++Y  +I   C+  R+ +++E L+ 
Sbjct: 448 HCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQ 507

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M   G KPN   Y  LI+G    G   +A EL + ++
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 191/430 (44%), Gaps = 20/430 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  DE+L     M   G  P+VV    +I    +  +   A+  +  + 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMI 157
             G +P+   Y++LI GFC    +  A +++  +  +G   P++  ++ +I SLC+ G +
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A  VF+ ++    +P + T+  LI    L G+ DKA  +LD M               
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAM--------------- 614

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               S G +PDV++Y+ L+      G+ ++G  L  EM+ + ++P  VTYS+++  L R 
Sbjct: 615 ---VSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRA 671

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+T  A  +     E G      +Y  ++   C++   D AI     + +     +I   
Sbjct: 672 GRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAIL 731

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NT++ A  K    ++A ++F  +S  G  PN S+Y  M   L   G    A  M S M  
Sbjct: 732 NTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEK 791

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  P     N +I  L + G + +A   +  ++ T       + +++I  F    R  E
Sbjct: 792 TGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYRE 851

Query: 458 SIEVLAAMFE 467
            I+ L A ++
Sbjct: 852 QIKFLPAKYQ 861


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 225/455 (49%), Gaps = 31/455 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI  + +   + KAV     ++ +G +PDVF YN+++    +     LA  V +++    
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           ++P+  T+ I++  LC  G  + A K+FD++ +    P  + YTI++       +TD   
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +LL+ M                 G CK G + +AF  ++  E  G    +  Y+ L+  L
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
               +++E ++   +M   G+EP+VV Y+ILI   C  G  + A+++L    ++GL+PD 
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           Y Y+ LI  +C  G LD A      +  + C P    Y  ++   C+NG  D+A +IF +
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-----------LSKGIEP--DEIT 406
           + ++GC P++ ++N +   L  +G+   A  +  +M           LS+G +   D  +
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTAS 496

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
             +++  LC  G++ +A  LL+ +  +   P +++YN++I GFCK + IN + ++   + 
Sbjct: 497 LQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ 556

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            KG  P+  TY  LI+G        +A  + + +V
Sbjct: 557 LKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMV 591



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 214/489 (43%), Gaps = 68/489 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG------ 102
           +A + D+    + +M  +GC PD + C  L+  F +  + ++A  ++++ EK G      
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307

Query: 103 ------------------------------EPDVFAYNALISGFCKANQIELANKVLDRL 132
                                         EPDV  Y  LI GFC+   ++ A  +L+ +
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM 367

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
             RG SPD   YN +I   C  G+++ A  +  ++ +++C PT  TYTILI         
Sbjct: 368 TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI--------- 418

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     GMC+ G++ +A Q    +E+ GC P ++++N L+  L   G+ EE   L 
Sbjct: 419 ---------CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469

Query: 253 TEM-----------ISRGLEPNVVTYSI--LISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            +M           +S+G +  + T S+  ++  LC  G    A  +L    + G+ PD 
Sbjct: 470 YKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ LI+ +CK   ++ A +    +   G  PD V Y T++  F +    + A  + ++
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQ 589

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   GC P+ + Y  + +     G    A  +  + L + +   E     L       G 
Sbjct: 590 MVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGE 648

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +++AV  L++M        +  Y I ++G C+ RR  E++++   + E     N  + V+
Sbjct: 649 LEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVM 708

Query: 480 LIEGIGYGG 488
           LI G+   G
Sbjct: 709 LINGLCKDG 717



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 170/368 (46%), Gaps = 19/368 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R R F    VT+N++I  L      ++ +K+ ++L   N +    T+++LI A       
Sbjct: 89  RRRSFR-SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAA------- 140

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K GM  +A +    ++  GC+PDV +YN +L  ++    +     + 
Sbjct: 141 -----------YAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVY 189

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M+     PN  T+ IL++ LC++GKT+DA+ +     +KG+ P+   Y  ++S  C+ 
Sbjct: 190 NQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQA 249

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R D     L+ M   GC PD +  N +L  FCK G  D+A  + +     G    +  Y
Sbjct: 250 KRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +++   L+ +           +M   GIEPD + Y  LI   C  GMVD A+ +L DM  
Sbjct: 310 SSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P    YN +I GFC    ++++  +   + +  C P   TY +LI G+   G   E
Sbjct: 370 RGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDE 429

Query: 493 AMELANAL 500
           A ++ N +
Sbjct: 430 ARQIFNQM 437



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            F+F      R      +++N+++  L     ++   K++ E+ +  ++    T+S+LI+
Sbjct: 80  GFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIA 139

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +  + G  E AV+     K+ G  PD ++Y+ ++    +     LA+   + M+     P
Sbjct: 140 AYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNP 199

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +   +  +L   CKNG  D AL++F++++  G PPN   Y  + S L  +        ++
Sbjct: 200 NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLL 259

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           + M   G  PD IT N+L+   C+ G +DEA  LL   E   +   +  Y+ +I G  + 
Sbjct: 260 NTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRA 319

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           +R +E  E    MF+ G +P+   Y +LI G    G    A+ + N + +   +S DT+
Sbjct: 320 KRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM-TQRGLSPDTY 377



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 31/277 (11%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +M++ +    PD+  YN LI+GFCKA  I  A K+   L+ +G SPD VTY  +I     
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
               E AF+V DQ++++ C P+   Y  L+  +                  C+KG +  A
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS------------------CRKGKLSVA 618

Query: 214 F----QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           F    +++RSL S+  + + +    L       G+ E+  + + EM  +     +  Y+I
Sbjct: 619 FSLWLKYLRSLPSQ--EDETLK---LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTI 673

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            +  LC+  ++E+A+ +    KE  +  +  S   LI+  CKDG L++A++   Y +  G
Sbjct: 674 WLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733

Query: 330 --CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
              +P I   N +L +         AL++  +++  G
Sbjct: 734 FMLMPRIC--NQLLRSLILQDKMKHALDLLNRMNSAG 768


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 234/500 (46%), Gaps = 19/500 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R  +F+  +  ++ M+  G  P     + LI+   +      A  ++  + K G  P++F
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I+  CK  ++E A  +   +  RG +P+ VTY I+I     R  ++ AF  F+++
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +      TV +Y  +I      G+   A  L  EM                 G CK G+V
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF+    +  +G  P+ +++  L+  L  + K  E  KL  EM+   + PN VTY++L
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   CR+G T  A ++L    +KGL+PD Y+Y PLI+  C  GR+  A EF++ +     
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             D + Y  +L  FCK G   +AL   +++   G   ++ SY  + S   +  D+I    
Sbjct: 607 RLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI-LFE 665

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  KG++PD + Y  LI    + G + +A      M    + P  ++Y  ++ G  
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   +NE+  +   M      PN  TY   ++ +   G    A++L NA++     +  T
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT 785

Query: 511 FKRLNRTFPLLDVYKEISHL 530
           +  L R +  +  ++E + L
Sbjct: 786 YNILIRGYCQIGKFQEAAKL 805



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 224/473 (47%), Gaps = 24/473 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIK---KFFQERKSNKAVRVMEILEKYGEPD 105
           R  K D + Y+   M+  G    V     +I    KF + + +    +  E+++K  +P 
Sbjct: 412 RRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFK--EMVDKGLKPT 469

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y +LISG+CK   +  A K+   +  +G +P+ VT+  +I  LC    +  A K+FD
Sbjct: 470 VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFD 529

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           +++     P  +TY +LI+    EG T +A +LLDEM                 G+C  G
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            V +A +F+  L  +  + D + Y  LL+     G+ +E      EM+ RGL+ ++V+Y+
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LIS    +       ++LR    KG+ PD   Y  LI  + K G L  A EF   MI +
Sbjct: 650 VLISG-ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G +P+ V Y  ++    K G  ++A  +F+++      PN  +Y      L   G+   A
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L + + ML +G   + +TYN LI   C+ G   EA  LL  M      P  I+Y+  I  
Sbjct: 769 LQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYE 827

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +CK   ++ ++++   M ++G KP+   +  LI      G    A++L N ++
Sbjct: 828 YCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMM 880



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 211/447 (47%), Gaps = 19/447 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  KF + L   +++V  G KPD  + T ++K   + +  NKA  ++   E  G    + 
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIV 261

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  I+G CK+ ++  A +V   L  +G   D+VTY  ++  LC     E   ++ D++
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +     P+    + LI+                  G+ K G +  AF+ +  +   G  P
Sbjct: 322 IELGYVPSEAAVSGLIE------------------GLIKMGSIEGAFELLNKVGKLGVVP 363

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++  YN ++ +L   GK EE E L + M  RGL PN VTY+ILI    R  K + A    
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYF 423

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E G++   YSY+ +I+  CK G++ +A      M+  G  P +  Y ++++ +CK+
Sbjct: 424 NKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKD 483

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A +++ +++  G  PN  ++  +   L        A  +  EM+   I P+E+TY
Sbjct: 484 GLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY 543

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI   CR+G    A  LL +M      P   +Y  +I G C T R++E+ E +  +  
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAM 494
           K  + +E  Y  L++G    G   EA+
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEAL 630



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 20/435 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + Q ++    V V+ ++  YG  P+V   +AL++   +  +     ++ D L + G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PD   Y +++  LC       A ++ +Q   + C  +++TY + I             
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFIN------------ 268

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK   V +A +  RSL  +G + D+++Y  L+  L  + ++E G ++M EMI
Sbjct: 269 ------GLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+    S LI  L + G  E A ++L    + G+ P+ + Y+ +I++ CK G+L+
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLE 382

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A      M   G  P+ V Y  ++  F +    D A   F K+ + G    V SYN+M 
Sbjct: 383 EAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMI 442

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           +     G    A  +  EM+ KG++P   TY SLIS  C+DG+V +A  L  +M      
Sbjct: 443 NCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIA 502

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P  +++  +I G C+  ++ E+ ++   M E    PNE TY +LIEG    G    A EL
Sbjct: 503 PNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFEL 562

Query: 497 ANALVSMHAISRDTF 511
            + ++    +S DT+
Sbjct: 563 LDEMIK-KGLSPDTY 576



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 205/461 (44%), Gaps = 53/461 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK   +    + MV  G KP V   T LI  + ++    KA ++   +   G  P+  
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTV 506

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            + ALI G C+ N++  A+K+ D +      P+ VTYN++I   C  G    AF++ D++
Sbjct: 507 TFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG-- 208
           ++    P   TY  LI      G+  +A + ++++                 G CK+G  
Sbjct: 567 IKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRI 626

Query: 209 ---------MVGQA-----------------------FQFVRSLESRGCQPDVISYNMLL 236
                    MVG+                        F+ +R +  +G QPD + Y +L+
Sbjct: 627 KEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILI 686

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
              +  G  ++  +    MI  G  PN VTY+ L++ L + G   +A  + +        
Sbjct: 687 DGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI 746

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y   +    K+G ++ A++  + M+  G   + V YN ++  +C+ G   +A ++
Sbjct: 747 PNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKL 805

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            + +  +G  P+  +Y+T        G+   A+ M   ML +G++PD + +N LI   C 
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCL 865

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G +D A+ L  DM     +PT  +Y+ +++   +  R+ +
Sbjct: 866 NGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 53/429 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G   ++      M   G  P+ V  T LI    Q  K  +A ++  E++
Sbjct: 473 YTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV 532

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P+   YN LI G C+      A ++LD +  +G SPD  TY  +I  LCS G + 
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM---------------------- 196
            A +  + L   + +   + YT L+Q    EG+  +A+                      
Sbjct: 593 EAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652

Query: 197 ------------KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
                       +LL EM                 G  K G + +AF+F   +   G  P
Sbjct: 653 SGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVP 712

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + ++Y  L+  L   G   E + L   M+     PN +TY   +  L ++G  E+A+  L
Sbjct: 713 NSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ-L 771

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
             A  +G   +  +Y+ LI  YC+ G+   A + LD MI  G +PD + Y+T +  +CK 
Sbjct: 772 HNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKR 831

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN D A++++E +   G  P+   +N +  A   +G+  RAL + ++M+ +G++P + TY
Sbjct: 832 GNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTY 891

Query: 408 NSLISCLCR 416
           +SL+  L +
Sbjct: 892 HSLMVQLAQ 900



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 161/365 (44%), Gaps = 28/365 (7%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI+   R G    +   ++ M+  G  PD      LI       + ++A   + 
Sbjct: 540 EVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++  K+   D   Y AL+ GFCK  +I+ A      +  RG   D+V+Y ++I      G
Sbjct: 600 DLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-----G 654

Query: 156 MIESAFKVFDQLLRD----NCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
            +    ++  +LLR+      +P  + YTILI   +  G   KA +    M         
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+ K G V +A    + +      P+ I+Y   L  L   G  E   +L   
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ +G   N VTY+ILI   C+ GK ++A  +L      G+ PD  +Y   I  YCK G 
Sbjct: 775 ML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A++  + M+  G  PD V +N ++ A C NG  D+AL++   +   G  P  S+Y++
Sbjct: 834 VDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHS 893

Query: 375 MFSAL 379
           +   L
Sbjct: 894 LMVQL 898



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 19/337 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RVS + E   + H     + E  +  L++   + G+  E+L   + MV  G + D+V   
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
            LI     +        + E+  K  +PD   Y  LI GF K+  ++ A +    +   G
Sbjct: 650 VLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEG 709

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           + P+ VTY  ++  L   G +  A  +F ++L     P  ITY   +     EG  + A+
Sbjct: 710 YVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENAL 769

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
           +L + M                    +G   + ++YN+L+R    +GK++E  KL+  MI
Sbjct: 770 QLHNAM-------------------LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMI 810

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G+ P+ +TYS  I   C+ G  + A+D+     ++GL PD   ++ LI A C +G LD
Sbjct: 811 GIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD 870

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            A++  + M+  G  P    Y++++    +     Q 
Sbjct: 871 RALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907


>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 496

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 201/381 (52%), Gaps = 26/381 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G+  ++   I+ M      P+   CT LI+ F +  + NKA R+++I+   G  PDV  Y
Sbjct: 112 GRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPDVITY 171

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N ++ G CK  +++ A  +L+ +   G  PDVVTYN +I  +      + A + + + LR
Sbjct: 172 NMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLR 231

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P +ITYTILI+       T +AM++L++M +                   GC PD+
Sbjct: 232 RGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAI------------------EGCYPDL 273

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN L+      GK+E+   ++  M+S G+EPN +TY+ L+ SLC  G  ++  ++L  
Sbjct: 274 VTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTV 333

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK--- 346
            KE    P   +Y+ LI+  CK G ++ AI+F   M+ + CLPDIV YNT+L A CK   
Sbjct: 334 MKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEEC 393

Query: 347 ----NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
               +   + A+EI  ++       N  +Y ++   L ++     A+ ++  M+S   +P
Sbjct: 394 WMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKP 453

Query: 403 DEITYNSLISCLCRDGMVDEA 423
           DE  Y++LI+ L   GM++EA
Sbjct: 454 DEEIYSALINSLADAGMMEEA 474



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 191/383 (49%), Gaps = 24/383 (6%)

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           +  LC++G +  A ++ D + R +  P     T LI+  +   Q +KA ++L  M     
Sbjct: 105 LQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGG 164

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G+CK+G +  A   +  +   GC PDV++YN ++R + +   +++  +
Sbjct: 165 VPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVR 224

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
              E + RG  P ++TY+ILI  +C+   T  A++VL     +G  PD  +Y+ L++  C
Sbjct: 225 FWKEQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTC 284

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K G+ + A   +  M+S G  P+ + YNT+L + C  G  D+  EI   + +   PP V 
Sbjct: 285 KQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVV 344

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD-------GMVDEA 423
           +YNT+ + L  SG   RA+    +M+ +   PD +TYN+L+  LC++          ++A
Sbjct: 345 TYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDA 404

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V +L +M     R    +Y  +I G C  ++ + +I+VL  M    CKP+E  Y  LI  
Sbjct: 405 VEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINS 464

Query: 484 IGYGGWRAEAMELANALVSMHAI 506
           +   G   EA EL   L+++  +
Sbjct: 465 LADAGMMEEANELRQKLINIKVL 487



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 162/314 (51%), Gaps = 5/314 (1%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C KG +  A + +  +  R   P+      L+R  + + +  +  +++  M+  G  P+
Sbjct: 108 LCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPD 167

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V+TY++++  LC+ GK + A+D+L      G  PD  +Y+ +I     +   D A+ F  
Sbjct: 168 VITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWK 227

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             +  GC P ++ Y  ++   CK+    +A+E+ E ++  GC P++ +YN++ +     G
Sbjct: 228 EQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQG 287

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +I  MLS G+EP+ ITYN+L+  LC  G+ DE   +L  M+ T   PTV++YN
Sbjct: 288 KYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYN 347

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVS 502
            +I G CK+  +N +I+    M  + C P+  TY  L+  +     W + + +  +A+  
Sbjct: 348 TLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAV-- 405

Query: 503 MHAISRDTFKRLNR 516
              I R+  KR +R
Sbjct: 406 --EILREMGKRDHR 417



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 138/305 (45%), Gaps = 32/305 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I+  F    FD+++ F +  +  GC P ++  T LI+      K    VR ME+LE
Sbjct: 206 YNTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLITYTILIELVC---KHCGTVRAMEVLE 262

Query: 100 KYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
                   PD+  YN+L++  CK  + E A  ++  + S G  P+ +TYN ++ SLCS G
Sbjct: 263 DMAIEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCG 322

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           + +   ++   +   +  PTV+TY  LI                   G+CK G+V +A  
Sbjct: 323 LWDEVDEILTVMKETSHPPTVVTYNTLIN------------------GLCKSGLVNRAID 364

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKW-------EEGEKLMTEMISRGLEPNVVTYS 268
           F   +    C PD+++YN LL  L     W       E+  +++ EM  R    N   Y 
Sbjct: 365 FFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREMGKRDHRINSYAYR 424

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I  LC + KT+ A+ VL         PD   Y  LI++    G ++ A E    +I+ 
Sbjct: 425 SVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINSLADAGMMEEANELRQKLINI 484

Query: 329 GCLPD 333
             L D
Sbjct: 485 KVLKD 489


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 213/461 (46%), Gaps = 25/461 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   R GK D++   I  M      PDV     +I    + R+ ++A+   E  E   
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI---EFFETMP 97

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EPDV  YN L+ G CK  ++  A  +   +   G +P  VTY  +I   C     E+A+ 
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +   +    C PTV +Y  +I                   G+CK   V QA+Q    ++ 
Sbjct: 158 LLQLMASRKCSPTVYSYCSIIN------------------GLCKNRKVDQAYQLFEEMKL 199

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC+PD ++YN L+  L    +  E + L+T M+  G +P+ +T++ LI  LC   + ++
Sbjct: 200 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKE 259

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DYMISDGCLPDIVNYNTIL 341
           A  + +   ++G  PD  ++  L+S  C   +L  A+  + +Y     C   ++ Y  I 
Sbjct: 260 AFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY---PACPEAVILYTPIF 316

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               +    D+A  + +K++  G PPNV +Y   F  L    + +RA      ML +GIE
Sbjct: 317 RELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIE 376

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD + YN L+   C+   +D A  ++  M+ +   P +++YN ++   C+  ++    E+
Sbjct: 377 PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 436

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           L  M  +G +P+  T+  L+ G+   G    A    N  +S
Sbjct: 437 LHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMS 477



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 172/364 (47%), Gaps = 21/364 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  LI    +  +F+ +   ++ M +  C P V     +I    + RK ++A ++ E
Sbjct: 136 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G +PD   YN LI G C   ++  A  +L  +   GF PD +T+  +I  LC+  
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ AF +F  + +  C P ++T+T+L+                    +C    +  A  
Sbjct: 256 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSK------------------LCILRKLRPALS 297

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            VR+  +  C   VI Y  + R L     ++   +L+ +M  RG+ PNVVTY+     L 
Sbjct: 298 VVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLG 355

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              +   A    R   E+G+ PD  +Y+ L+  +CK  RLD+A + + YM   G  P+IV
Sbjct: 356 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIV 415

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   C+ G  +   E+   +   G  P+V++++T+ + L+  G    A   ++  
Sbjct: 416 TYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLA 475

Query: 396 LSKG 399
           +S+G
Sbjct: 476 MSQG 479



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 188/444 (42%), Gaps = 56/444 (12%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           NAL+    +A + E    V  R+ S+   P+ ++Y  ++ +LC  G I+ A     ++ R
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQF 216
           +   P V TY ++I       +  +A++  + M             G+CK G V QA   
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSL 123

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
             S+E  G  P  ++Y  L+     M ++E    L+  M SR   P V +Y  +I+ LC+
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           + K + A  +    K  G  PD  +Y+ LI   C   RL  A + L  M+ +G  PD + 
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS------------------------- 371
           +  ++   C      +A  +F+ ++  GC P++ +                         
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP 303

Query: 372 --------YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
                   Y  +F  L       RA  ++ +M  +G+ P+ +TY +        G+ D  
Sbjct: 304 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFK-----GLGDWK 358

Query: 424 VGLLVDMESTR-----FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            G+    E  R       P +++YN+++ GFCK  R++ + +++  M + G  PN  TY 
Sbjct: 359 EGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYN 418

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
            L+      G      EL + +VS
Sbjct: 419 TLVGHHCRKGKVEAIGELLHTMVS 442



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 57/382 (14%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           VT N ++  L      E    VF ++   +CKP  ++Y  L++A    G+ DKA   + E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           M   ++ +V                PDV +YN+++ TL    +     +    M     E
Sbjct: 61  MA--REKLV----------------PDVFTYNVVIDTLCKARRISRAIEFFETMP----E 98

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+VVTY+ L+  LC++G+   A  +  + +  G+TP   +Y  LI  +CK  + + A   
Sbjct: 99  PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGL 158

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M S  C P + +Y +I+   CKN   DQA ++FE++   GC P+  +YNT+   L  
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                 A  +++ M+  G +PD+IT+ +LI  LC    + EA  L   M      P +++
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 278

Query: 442 YNIIILGFCKTRRINESIEV---------------------------------LAAMFEK 468
           + +++   C  R++  ++ V                                 L  M  +
Sbjct: 279 HTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARR 338

Query: 469 GCKPNETTYVLLIEGIGYGGWR 490
           G  PN  TY    +G+  G W+
Sbjct: 339 GVPPNVVTYTAFFKGL--GDWK 358



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 4/237 (1%)

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VT + L+  L R  ++E  V V R    +   P+A SY  L+ A C+ G++D A   +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M  +  +PD+  YN ++   CK     +A+E FE + +    P+V +YNT+   L  +G 
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  +   M   GI P ++TY +LI   C+    + A GLL  M S +  PTV SY  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           II G CK R+++++ ++   M   GCKP+  TY  LI G+       EA +L   +V
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 19/263 (7%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F   +  F  LI+      +  E+    + M   GC PD+V  T L+ K    RK   A
Sbjct: 236 GFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA 295

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           + V+       E  V  Y  +     +    + A ++L ++  RG  P+VVTY      L
Sbjct: 296 LSVVRNYPACPEA-VILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
                   A++ F ++L    +P ++ Y +L+       + D A K++  M         
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYM--------- 405

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                    +  G  P++++YN L+      GK E   +L+  M+SRG +P+V T+S L+
Sbjct: 406 ---------DQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 456

Query: 272 SSLCRDGKTEDAVDVLRAAKEKG 294
           + L   G+ + A   L  A  +G
Sbjct: 457 AGLFMVGQADAAYSFLNLAMSQG 479


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 214/435 (49%), Gaps = 39/435 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY- 101
           +I+   +AG+ D +L  +E+M+  G  PD+   + LI +  +  K  +A   ++ + +  
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 102 --GEPDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIE 158
                  F+YN+L++  CKA ++  A  +   + S R   PDVV+Y+I+I   C    + 
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K++ Q++  NC P V TY   +   M +G+   A  + +EM                
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM---------------- 218

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              S GC PDVI+Y+ L+       K ++  +L   MISRG  PN VTY+ L+  LC++ 
Sbjct: 219 --ISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKES 276

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A ++ R   E+G  PD  +Y  L+  +C  G+++ A+E  D M+S G  PD+V YN
Sbjct: 277 KPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN 336

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LS 397
            +L  F + G   +A ++F+ +    C P+  S+N M   L  +     A+ +   M   
Sbjct: 337 CLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 396

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  PD +TYNSLI  LC +  + EA+ +  +++  +  P   ++N++            
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL------------ 444

Query: 458 SIEVLAAMFEKGCKP 472
               L AM+  G KP
Sbjct: 445 ----LEAMYAAGHKP 455



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 216/422 (51%), Gaps = 25/422 (5%)

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLR 133
           C  +I++  +  + + A+ ++E + K G  PD+  ++ LI+  CKA++I+ A + L  + 
Sbjct: 52  CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM- 110

Query: 134 SRGFS---PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLE 189
           +R  S       +YN ++ SLC    +  AF +F  ++ + +  P V++Y+ILI      
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILID----- 165

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G CK   +G+A +  + +    C P+V +YN  L  L+  G+  + +
Sbjct: 166 -------------GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQ 212

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            +  EMIS G  P+V+TYS LI       K + A ++  A   +G  P+A +Y+ L+   
Sbjct: 213 GVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGL 272

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK+ + D A E    M+  GC PD V Y T+L  FC  G  +QA+E+F+++   G  P+V
Sbjct: 273 CKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 332

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YN +    + +G    A  +   M+S+  +PD +++N +I  L +   +D+AV +   
Sbjct: 333 VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392

Query: 430 MESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           ME      P +++YN +I G C  +R++E+++V   +      P+   + +L+E +   G
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452

Query: 489 WR 490
            +
Sbjct: 453 HK 454



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 20/273 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +   +    R G+  ++    E M++ GC PDV+  + LI  F   RK ++A  + E 
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +   G  P+   YN L+ G CK ++ + A+++  ++  RG  PD VTY  ++   C+ G 
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           IE A +VFD+++     P V+ Y  L++                  G  + G  G+A Q 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLK------------------GFFRAGKPGEARQL 354

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVTYSILISSLC 275
            + + SR C+PD +S+N+++  L    + ++  ++   M    G  P++VTY+ LI  LC
Sbjct: 355 FQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 414

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            + +  +A+ V +      L+PD ++++ L+ A
Sbjct: 415 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 41/280 (14%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY---SYDPLISAYCKDGRLDLAI 319
           N V ++  +  LC+ GK E A +  R  +E   +       +   +I   CK GR+D A+
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 320 EFLDYMISDGCLPDIV-------------------------------------NYNTILA 342
             L+ MI  G  PD+                                      +YN++L 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 343 AFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
           + CK     QA  IF  + S+    P+V SY+ +        +  RA  +  +M+     
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P+  TYN+ ++ L R G + +A G+  +M S    P VI+Y+ +I GF   R+ +++ E+
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             AM  +GC+PN  TY  L+ G+       EA EL   +V
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 200/396 (50%), Gaps = 23/396 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L +   PD++ +N +ISG C+  Q+  A  V   +++ G +P V TYN +I   C +G  
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 158 ESAFKVFDQLLRD----NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            + + V D LL++       PT +T+ +LI                   G CK      A
Sbjct: 243 GNMYHV-DMLLKEMVEAGISPTAVTFGVLIN------------------GYCKNSNTAAA 283

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G    V++YN L+  L + GK EEG KLM EM   GL PN +T+  ++  
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C+ G   DA D +    E+ + PD   Y  LI  Y + G+++ A+   + M   G  P+
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN ++  F ++G+   A  + +++ + G   +V +YN +  AL   G+  +A+ ++ 
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM   G+EP+ +TYN++I   C  G +  A  +   ME  R R  V++YN+ I  FC+  
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           +++E+ ++L  M +K   PN  TY  + EG+   G+
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 194/401 (48%), Gaps = 21/401 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   + NAL++G   A +++LA K       R  SPD+ T+N +I  LC  G +  A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ---FVRSL 220
              +      P+V TY  LI                   G CKKG  G  +     ++ +
Sbjct: 214 AKDIKAWGLAPSVATYNSLID------------------GYCKKGGAGNMYHVDMLLKEM 255

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P  +++ +L+             ++  EM  +G+  +VVTY+ LIS LC +GK 
Sbjct: 256 VEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKV 315

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+ V ++   ++ GL+P+  ++  ++  +CK G +  A +++D M      PD+V Y  +
Sbjct: 316 EEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTIL 375

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  + + G  + A+ + E ++  G  PNV++YN + +    SGD   A G++ EM  KGI
Sbjct: 376 IDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGI 435

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           E D +TYN LI  LC  G V +AV LL +M      P  ++YN II GFC    I  + E
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +   M +   + N  TY + I+     G   EA +L N ++
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 182/384 (47%), Gaps = 21/384 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK---ANQIELA 125
           PD+     +I    +  +  KA  V + ++ +G  P V  YN+LI G+CK   A  +   
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + +L  +   G SP  VT+ ++I   C      +A +VF+++ +     +V+TY  LI  
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              EG+ ++ +KL++EM                 G CKKGM+  A  ++  +  R  +PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+ Y +L+     +GK E+   +   M  +G+ PNV TY+ LI+   R G    A  +L 
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             KEKG+  D  +Y+ LI A C  G +  A++ LD M   G  P+ + YNTI+  FC  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A EI  ++       NV +YN         G    A  +++EML K + P+ ITY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 409 SLISCLCRDGMVDEAVGLLVDMES 432
           ++   +   G   +  G  V   S
Sbjct: 549 TIKEGMMEKGYTPDIRGCTVSQAS 572



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 10/273 (3%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +P   S N LL  L+   + +  EK     + R + P++ T++ +IS LCR G+   A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDG------RLDLAIEFLDYMISDGCLPDIVNYNT 339
           V +  K  GL P   +Y+ LI  YCK G       +D+    L  M+  G  P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGV 269

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  +CKN N   A+ +FE++   G   +V +YN++ S L S G     + ++ EM   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+EIT+  ++   C+ GM+ +A   +  M      P V+ Y I+I G+ +  ++ +++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGG-WRA 491
            V  AM +KG  PN TTY  LI G    G WR+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 52/240 (21%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    R GK ++++   E+M   G  P+V                              
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVT----------------------------- 405

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 YN LI+GF ++     A+ +LD ++ +G   DVVTYN++IG+LC +G +  A K
Sbjct: 406 -----TYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + D++     +P  +TY  +IQ                  G C KG +  A++    +E 
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQ------------------GFCDKGNIKSAYEIRTRMEK 502

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
              + +V++YN+ ++    +GK +E   L+ EM+ + L PN +TY  +   +   G T D
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI    R+G +  +   ++ M   G + DVV    LI     + +  KAV++++ 
Sbjct: 405 TTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE 464

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + + G EP+   YN +I GFC    I+ A ++  R+       +VVTYN+ I   C  G 
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           ++ A  + +++L     P  ITY  + +  M +G T
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 230/476 (48%), Gaps = 19/476 (3%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           R  RA +    L    +M+ +G  P+      LI    +      A   +  + + G  P
Sbjct: 64  RGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAP 123

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           D F YN L+ G C+A  +  A  +  ++ R  G   D  +Y I+I  LC+ G I+ A +V
Sbjct: 124 DTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRV 183

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F ++ R  C+P V TYT+L+       +  +A  LL EM                 G+C+
Sbjct: 184 FAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQ 243

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G      + +  +E +   PD  +Y  ++  L   GK   G K++ E I +G+   V+T
Sbjct: 244 EGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLT 303

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI+  C+ G  + A+DVL+  K   + P   +++ +I  +C  G++  A+ FL  M 
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA 363

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P+ V +N++++  C  G    AL + + + + G  P+  +Y     AL   G   
Sbjct: 364 GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLE 423

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  + S +  KGI+   + Y SL+   C+ G +D A GL+  M S    P V +YN +I
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G CK +R++ +I++L  M ++G +P   T+ +LI+ + +    A+A ++   ++S
Sbjct: 484 DGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMIS 539



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 210/462 (45%), Gaps = 26/462 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK    AG+ D++      M    C+P V   T L+    + R+  +A  ++ E++ K 
Sbjct: 167 LIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG 226

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  YNALI G C+  + +   K+L+++  +  SPD  TY  ++  LC  G +    
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           KV  + +       V+TY  LI      G    A+ +L  M                 G 
Sbjct: 287 KVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGF 346

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A  F+  +   G  P+ +++N L+    ++G+ +   +L+  M   G+ P+ 
Sbjct: 347 CCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDR 406

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+I I +LC +G+ E+A  +      KG+      Y  L+  YC+ G +D A   ++ 
Sbjct: 407 QTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEK 466

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M S+ C+PD+  YNT++   CK    D+A+++ +K+   G  P   ++N +   +     
Sbjct: 467 MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM-----VDEAVGLLVDMESTRFRPTV 439
              A  M  +M+S G +PD+ TY   IS    +G      +D AV   V+M      P V
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAV---VEMHEAGVFPDV 583

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            +YN II  +       ++      M      P+ TTY +L+
Sbjct: 584 ETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 218/495 (44%), Gaps = 36/495 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F ++I      GK  +++ F+  M   G  P+ V    LI       +   A+R+++++E
Sbjct: 339 FNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME 398

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +YG  PD   Y   I   C   Q+E A+ +   L  +G     V Y  ++   C  G I+
Sbjct: 399 EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDID 458

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SAF + +++  +NC P V TY  LI       + D+A+ LLD+M                
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM---------------- 502

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             + +G +P   ++N+L++ +L   K  +  K+  +MIS G +P+  TY++ IS+   +G
Sbjct: 503 --KKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEG 560

Query: 279 KT-EDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            T E+ +D+ +    E G+ PD  +Y+ +I AY   G  + A      M+S    PD   
Sbjct: 561 ATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTT 620

Query: 337 YNTILAAFCKNGNAD--------------QALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           Y+ +L   C   ++D                 E+FE++ +    P +S+Y  +   L + 
Sbjct: 621 YSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQ 680

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                   ++ +M    I  DE   + L+ C C   M  EA      M    F+P + S 
Sbjct: 681 CRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSC 740

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +++ G C +     ++ + + M   G   +E  + LLI+ +   G     +E+ + + +
Sbjct: 741 CLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDA 800

Query: 503 MHAI-SRDTFKRLNR 516
              + S  T+  L R
Sbjct: 801 KKCVASTRTYASLVR 815


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 246/505 (48%), Gaps = 41/505 (8%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R+ S A  +PN     F    + + +++++  + G F+     ++ M    C+ D  + 
Sbjct: 71  LRLLSWASKQPN-----FRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVL 125

Query: 76  TKLIKKFFQERKSNKAVRVMEILE-KYGEP-DVFAYNALISGFCKANQIELANKVLDRLR 133
              I  + +     + + ++E++E ++G   D   YN L++     N+++L   V   + 
Sbjct: 126 LIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMV 185

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           S+G  PDV T+NI+I +LC    I  A  V +++      P   T+T L+Q  + EG  D
Sbjct: 186 SKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMD 245

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFV----------------RSL 220
            A ++ ++M                 G CK+G + +A  F+                  +
Sbjct: 246 GAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEM 305

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           +++GCQPD  +YNML+ +L   GK +E   L+ EM   G   NV+TY+ LI   C++ K 
Sbjct: 306 KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKI 365

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+A ++    + +GL+ ++ +Y+ LI   CK  R+  A + +D MI +G  PD   YN++
Sbjct: 366 EEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSM 425

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L  FC+ G+  +A +I + ++  GC P++ +Y T+   L  +G    A  ++  +  KG+
Sbjct: 426 LTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGM 485

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT-RRINESI 459
                 YN +I  L +     EA+ L  +ME     P   +Y I+  G   +   I E++
Sbjct: 486 VLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAV 545

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI 484
           + +  M EKG  P  +++ +L EG+
Sbjct: 546 DFVIEMIEKGFLPEFSSFYMLAEGL 570



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 20/288 (6%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G   D + YN LL  L++  K +  E + + M+S+G++P+V T++ILI +LC+  +   A
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + V+      GL PD  ++  L+  + ++G +D A    + M+  GC    V  N ++  
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FCK G  ++AL   +++S+                    G    A+ + +EM +KG +PD
Sbjct: 273 FCKEGRIEEALSFIDEMSN-------------------EGKHTMAIELYNEMKNKGCQPD 313

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E TYN LI  LC  G + EA+GLL +ME +     VI+YN +I GFCK ++I E+ E+  
Sbjct: 314 EFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFD 373

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            M  +G   N  TY  LI+G+       EA +L + ++ M  +  D F
Sbjct: 374 QMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMI-MEGLKPDKF 420


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 239/478 (50%), Gaps = 20/478 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK S +  +F++    +  M  NG  PD++    LI    +      AV + + +   G
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF +      AN++  RL +     P V TYNIMI  LC  G ++ +
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            ++++++ ++   P + T++ +I      G  + A K+  EM                 G
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + + G + + F+    +    C  +++SYNML++ LL+  K E+       +  RGL+ +
Sbjct: 335 LFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY +LI+ LC++G    A+ +L  A+ +G   D ++Y  ++   CK G L+ A+E + 
Sbjct: 394 STTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIH 453

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M  +    +   +N+++  + +    ++A+ +  ++    C P V SYNT+ + L  + 
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAE 513

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A   + EML +G++PD ITY+ LI  LCR   VD A+ L     + R +P +  +N
Sbjct: 514 RFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHN 573

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           III G C  ++++ ++E+   M +  C P+  T+  ++EG+   G   EA+++ + ++
Sbjct: 574 IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRIL 631



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 18/407 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    +AG F+ +    + M+ +G  PDV     ++   F+  K NK   +  ++ 
Sbjct: 293 FSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMS 352

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K    ++ +YN LI G     ++E A      L  RG   D  TY ++I  LC  G +  
Sbjct: 353 KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNK 412

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++ ++   +        Y+ ++                   G+CKKGM+ QA + +  
Sbjct: 413 ALRILEEAENEGADLDTFAYSSMVH------------------GLCKKGMLEQAVELIHQ 454

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++    + +   +N L+   +   K EE   ++ EM S+   P VV+Y+ +I+ LC+  +
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             DA   L+   E+GL PD  +Y  LI   C+  ++D+A+      I+    PD+  +N 
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+   C     D ALEIF ++  V C P++ ++NT+   L+ +GD + AL +   +L  G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           ++PD I+YN     LC    V +A+  L D       P   ++N+++
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 220/464 (47%), Gaps = 21/464 (4%)

Query: 44  IKRSFRAGKFDESLYFIESMV-ANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           IK   +    D++L   ++MV   GC P +     ++  F +  +  +A       +  G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++  YN LI   CK  Q E    +L  +   G +PD+++Y  +I +L   G +  A 
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------G 203
           ++FD++      P V+ Y ILI   + +G   KA ++   +                  G
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G + ++ +    ++     PD+ +++ ++  L   G +   EK+  EMI  GL P+
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V TY+ ++S L R GK     ++     +     +  SY+ LI     + +++ AI +  
Sbjct: 325 VRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQ 383

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            +   G   D   Y  ++   CKNG  ++AL I E+  + G   +  +Y++M   L   G
Sbjct: 384 LLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKG 443

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              +A+ +I +M     + +   +NSLI+   R   ++EA+ +L +M+S    PTV+SYN
Sbjct: 444 MLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYN 503

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            II G CK  R +++   L  M E+G KP+  TY LLI+G+  G
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 197/398 (49%), Gaps = 18/398 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD+F ++++I G  KA     A KV   +   G SPDV TYN M+  L   G +   F++
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAM---KLLDEMGM--------------CK 206
           ++ + ++NC   +++Y +LIQ  +   + ++A+   +LL E G+              CK
Sbjct: 348 WNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G + +A + +   E+ G   D  +Y+ ++  L   G  E+  +L+ +M     + N   
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ LI+   R  K E+A+ VLR  K K   P   SY+ +I+  CK  R   A   L  M+
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            +G  PD++ Y+ ++   C+    D AL ++ +  +    P++  +N +   L ++    
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVD 586

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL + ++M      PD +T+N+++  L + G   EA+ +   +     +P +ISYNI  
Sbjct: 587 VALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITF 646

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            G C   R++++IE L    ++G  PN  T+ +L+  +
Sbjct: 647 KGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 43/344 (12%)

Query: 163 VFDQLLRDNCKPTVITYT----ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           VF  +LR    P ++ +      L++A       D A+  +     C   M  QA    +
Sbjct: 45  VFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKC--SMPDQALNLFQ 102

Query: 219 SL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           ++ +  GC P + S+N +L   +   +W E E   T   + G+ PN+ T           
Sbjct: 103 NMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQT----------- 151

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
                                   Y+ LI   CK  + +     L +M  +G  PDI++Y
Sbjct: 152 ------------------------YNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSY 187

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++ A  K+GN   A+E+F+++S  G  P+V  YN +       GD ++A  +   +L+
Sbjct: 188 GTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLT 247

Query: 398 KG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           +  + P   TYN +I+ LC+ G +DE++ +   M+     P + +++ +I G  K    N
Sbjct: 248 ESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFN 307

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            + +V   M E G  P+  TY  ++ G+   G   +  EL N +
Sbjct: 308 AAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM 351



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 1/169 (0%)

Query: 339 TILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           + + A+ K    DQAL +F+ + D+ GC P + S+N+M +A   S     A    +   +
Sbjct: 83  SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT 142

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ P+  TYN LI   C+    ++  GLL  M      P ++SY  +I    K+  + +
Sbjct: 143 AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLD 202

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           ++E+   M  +G  P+   Y +LI+G    G   +A E+   L++  ++
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 217/454 (47%), Gaps = 7/454 (1%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GKF+++   I  M+ NG  PD    +++I       +   A  + + ++  G  PDV+ Y
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI  F KA  I+ A+  LD +   G  P VVTY  +I +      +  A ++F+ ++ 
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESRGCQPD 228
             C P VITYT LI      G  +KA ++   M G      V   F+   ++  +   P+
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK---PN 644

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y  L+  L    K ++   L+  M   G EPN + Y  LI   C+  K ++A +V  
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E G  P+ Y+Y  LI    KD RLDL ++ L  M+ + C P+IV Y  ++    K  
Sbjct: 705 KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A ++   + + GC PNV +Y  M      +G   + L +  EM SKG  P+ +TY 
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G +DEA  LL +M+ T +   V SY  +I G+   R    S+ +L  + + 
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKN 882

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  P    Y +LI+     G    A+EL   ++S
Sbjct: 883 GSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 916



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 240/565 (42%), Gaps = 84/565 (14%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C   K  E + +    +  PNT L         + K+I     A  F+E++ F+  M + 
Sbjct: 287 CKVGKWREALSLIEKEDFVPNTIL---------YNKMISGLCEASFFEEAMDFLNRMRST 337

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            C P+V     L+     +++  +  R++ ++   G  P    +N+L+  +CK++    A
Sbjct: 338 SCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA 397

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI---------------------------- 157
            K+L ++      P  V YNI+IGS+CS G +                            
Sbjct: 398 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 457

Query: 158 -------------ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
                        E A+KV  +++ +   P   TY+ +I       + + A  L  EM  
Sbjct: 458 VSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG 517

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                             K G++ QA  ++  +   GC+P V++Y  L+   L   K   
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD--------- 298
             +L   MI++G  PNV+TY+ LI   C+ G  E A  +    +     PD         
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637

Query: 299 -------AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
                    +Y  L+   CK  ++  A + L+ M  DGC P+ + Y+ ++  FCK    D
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+F K+ + G  PNV +Y+++   L+        L ++S+ML     P+ + Y  +I
Sbjct: 698 EAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             L +    DEA  L++ ME    +P V++Y  +I GF K  ++++ +E+   M  KGC 
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 817

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           PN  TY +LI      G   EA  L
Sbjct: 818 PNFVTYTVLINHCCATGHLDEAYAL 842



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 213/499 (42%), Gaps = 43/499 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI++  R G ++ +L  +  +   G KP  +    L++ F +  K + A  V   + + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D F         CK  +   A   L  +    F P+ + YN MI  LC     E A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
              +++   +C P V TY IL+   + + Q  +  ++L  M                   
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK------WEEGEKLMTEMISR 258
           CK      A++ ++ +E   C+P  + YN+L+ ++ + G+      +E  EK   EM+S 
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G   N V        LC  GK E A  V+      G  PD  +Y  +I   C   R++ A
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENA 508

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
                 M   G +PD+  Y  ++  F K G   QA    +++   GC P V +Y T+  A
Sbjct: 509 FFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHA 568

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL----------- 427
              +     A  +   M++KG  P+ ITY +LI   C+ G +++A  +            
Sbjct: 569 YLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628

Query: 428 VDM-----ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           VDM      +   +P V++Y  ++ G CK  ++ ++ ++L  MF  GC+PN   Y  LI+
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688

Query: 483 GIGYGGWRAEAMELANALV 501
           G        EA E+ + +V
Sbjct: 689 GFCKAAKLDEAQEVFHKMV 707



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 201/425 (47%), Gaps = 42/425 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV----- 94
           +  LI    +A K   +    E M+A GC P+V+  T LI  + +     KA ++     
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 95  -----------MEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                       +I     E P+V  Y AL+ G CKA++++ A  +L+ +   G  P+ +
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y+ +I   C    ++ A +VF +++     P V TY+ LI     + + D  +K+L +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+ K     +A++ +  +E +GC+P+V++Y  ++      GK 
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++  +L  EM S+G  PN VTY++LI+  C  G  ++A  +L   K+        SY  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  Y ++  L L +  L+ +  +G  P I+ Y  ++  F K G  + ALE+ +++  +  
Sbjct: 862 IEGYKREFILSLGL--LEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEV--ISA 917

Query: 366 PPNVSSYNTMFSAL---WSSGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             ++++   ++++L   +S   KI  A  +  +M+  G+ PD  T+  L+  L R    +
Sbjct: 918 SMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWE 977

Query: 422 EAVGL 426
           EA+ L
Sbjct: 978 EALQL 982



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 20/399 (5%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+     +A + L RL+  G+ P  +TYN ++        +++A  V  ++  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE--------------MGMCKKGMVGQAFQ 215
                   T     QA    G+  +A+ L+++               G+C+     +A  
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F+  + S  C P+V +Y +LL   LN  +    +++++ MI+ G  P+   ++ L+ + C
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL------DLAIEFLDYMISDG 329
           +      A  +L+  ++    P    Y+ LI + C  G L      +LA +  + M+S G
Sbjct: 390 KSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAG 449

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            + + VN  +     C  G  ++A ++  ++   G  P+ S+Y+ +   L ++     A 
Sbjct: 450 TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EM   G+ PD  TY  LI C  + G++ +A   L +M      PTV++Y  +I  +
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            K ++++ + E+   M  KGC PN  TY  LI+G    G
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 23/321 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    +A K DE+      MV +G  P+V   + LI + F++++ +  ++V+ ++LE  
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P++  Y  +I G  K  + + A K++  +  +G  P+VVTY  MI      G ++   
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++F ++    C P  +TYT+LI      G  D+A  LL+EM   +         + + +E
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK--QTYWPKHVSSYCKVIE 863

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G + + I         L++G  EE EK        G  P ++ Y +LI +  + G+ E
Sbjct: 864 --GYKREFI---------LSLGLLEEVEK-------NGSAPIILLYKVLIDNFVKAGRLE 905

Query: 282 DAVDVLRAAKEKGLTPDAYS--YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            A+++ +      ++  A    Y  LI ++    ++  A E    MI DG +PD+  +  
Sbjct: 906 VALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 965

Query: 340 ILAAFCKNGNADQALEIFEKL 360
           +L    +    ++AL++ + L
Sbjct: 966 LLMGLIRVRRWEEALQLSDSL 986



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 7/238 (2%)

Query: 215 QFVRSLESRGCQPDVIS--YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           +F+R  E RG   +V+    N+L+R     G W    + +  +   G +P  +TY+ L+ 
Sbjct: 192 EFLR--EIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              R  K + A  V R   E GL+ D ++      A CK G+   A+  ++    +  +P
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVP 306

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           + + YN +++  C+    ++A++   ++    C PNV +Y  +     +     R   ++
Sbjct: 307 NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL 366

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           S M+++G  P    +NSL+   C+      A  LL  ME    +P  + YNI+I   C
Sbjct: 367 SMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 227/477 (47%), Gaps = 32/477 (6%)

Query: 49  RAGKFDESL-YFIESMVANGC-KP-DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           RAG  D +L  F  ++   GC +P +  +   LI    +E      V V + + K G  P
Sbjct: 102 RAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHP 161

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +VF YN L+   C+ N++  A K+LD +  +G  PD VTY  ++  LC    ++ A +V 
Sbjct: 162 NVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVL 221

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
             +      P   +Y  ++ A   E +  +   ++ +M                   CK 
Sbjct: 222 AAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA 276

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +  A   +  +   GC P+V+++  L+R L + G+  +   +   M++ G  P+ V+Y
Sbjct: 277 GELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSY 336

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +ILI  LC  G  + A  +L + ++ G  P+  +Y  LI  + K G L  AI   + M  
Sbjct: 337 NILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSR 396

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC P++V Y  ++  FCK    +QA  + +K+    CPPN  ++NT+  +L       R
Sbjct: 397 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 456

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           ALG+  EM   G  P+  TYN LI  L R+G   +A+ ++ +M+S     ++++YN ++ 
Sbjct: 457 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 516

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG------IGYGGWRAEAMELAN 498
           G C+TR   E++  +  M  +G +PN  T+  +I        +    W   AM + N
Sbjct: 517 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 573



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 190/398 (47%), Gaps = 24/398 (6%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LI    + N +     V D +R  G  P+V TYN+++ +LC    + +A K+ D++ 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R  C P  +TY  ++       + D+A ++L  M                        P 
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----------------------PPV 227

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             SYN ++  L    + +E   ++++M+ RGL+PNV+TY+ ++ + C+ G+   A  +L 
Sbjct: 228 AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILA 287

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G TP+  ++  L+     DGR+  A++   +M+++G  P  V+YN ++   C  G
Sbjct: 288 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVG 347

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +   A  I   +   GC PNV +Y+T+      +GD   A+ + ++M   G +P+ + Y 
Sbjct: 348 DLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYT 407

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +++   C+  M ++A  L+  M      P  +++N +I   C  RR+  ++ V   M   
Sbjct: 408 NMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRH 467

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           GC PN  TY  LI G+   G   +A+ +   + S H I
Sbjct: 468 GCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS-HGI 504



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 177/379 (46%), Gaps = 19/379 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  ++    +AG+   +   +  MV  GC P+VV  T L++  F + + + A+ +   + 
Sbjct: 266 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 325

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P   +YN LI G C    ++ A+ +L+ +   G  P+V TY+ +I      G + 
Sbjct: 326 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 385

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +++ + R  CKP V+ YT ++                     CKK M  QA   + 
Sbjct: 386 GAISIWNDMSRSGCKPNVVVYTNMVDV------------------FCKKLMFNQAKSLID 427

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +    C P+ +++N L+R+L +  +      +  EM   G  PN  TY+ LI  L R+G
Sbjct: 428 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 487

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA+ ++   +  G+     +Y+ ++S  C+      A+ F+  MI  G  P+   ++
Sbjct: 488 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 547

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+ A+CK G    A  +   ++ V C  N+  Y  + + L +    + A+  + +ML +
Sbjct: 548 AIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYE 607

Query: 399 GIEPDEITYNSLISCLCRD 417
           GI P+ +T+N L+  + R+
Sbjct: 608 GIYPNTVTWNVLVRGVFRN 626


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 216/441 (48%), Gaps = 21/441 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PDVFAYNALISG 115
            +  M   GC PDV     ++K    +RKS +A  ++ ++ + G    P+  AYN +I G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
           F K   +  A  + + +  RG SPD+ TYN ++ +LC    ++ A  +  Q++     P 
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             TY  LI      GQ  +A+++  +M                   S+G  PDV++ N L
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKM------------------TSQGILPDVVTLNSL 327

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           + +L   GK ++   +   M  +G + ++ +Y I+++     G   D  ++       G+
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD++ ++ LI AY K G LD A    + M   G  PD+V Y+T++AA C+ G  D A+E
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
            F ++ D G  P++S+Y+ +     + GD ++A  ++ +M++KG+ PD   +N +I+ LC
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G V +A  +     S    P V+ YN ++ G+C   ++  ++ V   M   G +PN  
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVV 567

Query: 476 TYVLLIEGIGYGGWRAEAMEL 496
            Y  L+ G    G   E + L
Sbjct: 568 VYGTLVNGYCKVGRIDEGLSL 588



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 220/458 (48%), Gaps = 19/458 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
           F+ G  +++      MV  G  PD+     ++    + R  +KA  ++ ++++K   PD 
Sbjct: 227 FKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           + YN+LI G+    Q + A +V  ++ S+G  PDVVT N ++ SLC  G I+ A  VFD 
Sbjct: 287 WTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     K  + +Y I++                   G   KG +    +    + S G  
Sbjct: 347 MAMKGQKTDIFSYKIMLN------------------GYATKGCLVDLTELFNLMLSDGIA 388

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD   +N+L++     G  +    +  EM  +G+EP+VVTYS +I++LCR GK +DAV+ 
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++G+ P   +Y  LI  +C  G L  A + +  M++ G  PDI  +N I+   CK
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    A  IF+    +G  PNV  YNT+       G    AL +   M+S GI+P+ + 
Sbjct: 509 LGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVV 568

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y +L++  C+ G +DE + L  ++     +P+   YNII+ G  +  R   +      M 
Sbjct: 569 YGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMT 628

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           E G   +  TY +++ G+       EA+ L   L +M+
Sbjct: 629 ESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 233/470 (49%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A   D++   +  MV  G  PD      LI  +    +  +AVRV + +   G  PDV 
Sbjct: 263 KARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVV 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N+L++  CK  +I+ A  V D +  +G   D+ +Y IM+    ++G +    ++F+ +
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L D   P    + +LI+A    G  D+A  + +EM                  +C+ G +
Sbjct: 383 LSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A +    +  +G  P + +Y+ L++     G   + + L+ +M+++G+ P++  ++ +
Sbjct: 443 DDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFI 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I++LC+ G+  DA ++       GL P+   Y+ L+  YC  G+++ A+   D M+S G 
Sbjct: 503 INNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGI 562

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y T++  +CK G  D+ L +F ++   G  P+ + YN +   L+ +G  + A  
Sbjct: 563 QPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKV 622

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
              EM   GI  D  TY+ ++  L ++   DEA+ L  ++ +   +  + + NI+I G  
Sbjct: 623 KFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMF 682

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + RR+ E+ ++ A++   G  P+  TY +++  +   G   EA ++ +++
Sbjct: 683 QIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSM 732



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 215/446 (48%), Gaps = 27/446 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G++ E++   + M + G  PDVV    L+    +  K   A  V + +   G+  D+F+Y
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359

Query: 110 NALISGF----CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
             +++G+    C  +  EL N +L    S G +PD   +N++I +    GM++ A  +F+
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLML----SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++     +P V+TY+ +I A    G+ D A++  ++M                 G C  G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A   V  + ++G +PD+  +N ++  L  +G+  + + +    IS GL PNV+ Y+
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+   C  GK E+A+ V       G+ P+   Y  L++ YCK GR+D  +     ++  
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P    YN IL    + G    A   F ++++ G   +  +Y+ +   L+ +     A
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + +  E+ +  ++ D  T N +I+ + +   V+EA  L   +  +   P+V++Y+I++  
Sbjct: 656 ILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTN 715

Query: 449 FCKTRRINESIEVLAAMFEKGC-KPN 473
             K   + E+ ++ ++M   GC +PN
Sbjct: 716 LIKEGLVEEADDMFSSMENAGCEQPN 741



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 193/399 (48%), Gaps = 22/399 (5%)

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDNCKPTVI 177
           A  + L N+V      R  SP + TY I++   C+R    +     F Q+L+       I
Sbjct: 86  ALAVALFNRVSRAHGPRVLSPTLHTYGILM-DCCTRAHRPKLTLAFFGQVLKTGLGIDTI 144

Query: 178 TYTILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRS 219
             + L++      +T +A+ +L      +G              +C     GQA + +R 
Sbjct: 145 MISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRM 204

Query: 220 LESRG--CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           +   G  C P+ ++YN ++      G   +   L  EM+ RG+ P++ TY+ ++++LC+ 
Sbjct: 205 MAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKA 264

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              + A  +LR   +KG+ PD ++Y+ LI  Y   G+   A+     M S G LPD+V  
Sbjct: 265 RAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++A+ CK+G    A ++F+ ++  G   ++ SY  M +   + G  +    + + MLS
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI PD   +N LI    + GM+D A  +  +M      P V++Y+ +I   C+  ++++
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++E    M ++G  P+ +TY  LI+G    G   +A +L
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 193/444 (43%), Gaps = 29/444 (6%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P++H+         F  LIK   + G  D +      M   G +PDVV  + +I    + 
Sbjct: 389 PDSHI---------FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439

Query: 86  RKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            K + AV +  +++++   P +  Y+ LI GFC    +  A  ++ ++ ++G  PD+  +
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCF 499

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N +I +LC  G +  A  +FD  +     P V+ Y  L+    L G+ + A+++ D M  
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVM-- 557

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                            S G QP+V+ Y  L+     +G+ +EG  L  E++ +G++P+ 
Sbjct: 558 ----------------VSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPST 601

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+I++  L + G+T  A        E G+  D Y+Y  ++    K+   D AI     
Sbjct: 602 TLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKE 661

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + +     DI   N ++A   +    ++A ++F  +S  G  P+V +Y+ M + L   G 
Sbjct: 662 LHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGL 721

Query: 385 KIRALGMISEMLSKGIE-PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              A  M S M + G E P+    N ++  L     +  A   L  ++   F     +  
Sbjct: 722 VEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTT 781

Query: 444 IIILGFCKTRRINESIEVLAAMFE 467
           ++I  F       E I  L A + 
Sbjct: 782 LLIDLFSSKGTCREHIRFLPAKYH 805



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 3/288 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R+   R   P + +Y +L+       + +       +++  GL  + +  S L+  LC  
Sbjct: 97  RAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEA 156

Query: 278 GKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDI 334
            +T +A+D+ L      G  PD +SY  ++ + C D +   A E L  M   G  CLP+ 
Sbjct: 157 KRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNA 216

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YNT++  F K G+ ++A ++F ++   G  P++S+YN + +AL  +    +A  ++ +
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ KG+ PD  TYNSLI      G   EAV +   M S    P V++ N ++   CK  +
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I ++ +V  +M  KG K +  +Y +++ G    G   +  EL N ++S
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 230/477 (48%), Gaps = 30/477 (6%)

Query: 45  KRSFRA--------GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            RSFRA        G+F+E+   + +M A G   D   CT +++ F ++ +      +  
Sbjct: 181 HRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFR 240

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + + G  P++  Y+A I G C+   ++ A  VL+ +  +G  P+V T+  +I  LC  G
Sbjct: 241 RMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 156 MIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
            +E AF++F +L++ +  KP V TYT++I                   G CK+G + +A 
Sbjct: 301 WMERAFRLFLKLVKSSSYKPNVHTYTVMIG------------------GYCKEGKLARAE 342

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             +  +  +G  P+  +Y  L+      G ++   +LM +M   G  PN+ TY+ +I   
Sbjct: 343 MLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGF 402

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ GK ++A  VLR A  +GL  D  +Y  LI+ +CK G +  A++    M    C PDI
Sbjct: 403 CKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDI 462

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             Y TI+A +C+    +Q+ ++F+K   +G  P   +Y +M +     G    AL +   
Sbjct: 463 HTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFER 522

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+  G  PD ITY +LIS LC++  ++EA  L   M      P  ++   +   +C+  +
Sbjct: 523 MVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDK 582

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           I  ++  L  + ++  +   T   L+ +    G   A ++ L N L   +A+   T+
Sbjct: 583 ITIAVSFLDRLDKR--QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATY 637



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 194/396 (48%), Gaps = 18/396 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD  ++ AL+ G C+  + E A+ +L  + ++GF  D  T  +++ + C +G   +   
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +F ++      P ++ Y+  I      G   +A  +L+EM                 G+C
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 206 KKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           K G + +AF+ F++ ++S   +P+V +Y +++      GK    E L+  M+ +GL PN 
Sbjct: 298 KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ LI   C+ G  + A +++   K +G  P+ Y+Y+ +I  +CK G++  A + L  
Sbjct: 358 NTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRM 417

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
             S G   D V Y  ++   CK G+   AL++F+++++  C P++ +Y T+ +       
Sbjct: 418 ATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQ 477

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             ++  +  + LS G+ P + TY S+I+  CR G +  A+ +   M      P  I+Y  
Sbjct: 478 MEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGA 537

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +I   CK  R+ E+  +   M +K   P + T V L
Sbjct: 538 LISSLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PD  S+  L+      G++EE + L+  M ++G   +  T ++++ + CR G+  + 
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            D+ R   E G  P+  +Y   I   C+ G +  A   L+ M+  G  P++  + +++  
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 344 FCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            CK G  ++A  +F KL       PNV +Y  M       G   RA  ++  M+ +G+ P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +  TY +LI   C+ G  D A  L+  M+   F P + +YN II GFCK  +I E+ +VL
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415

Query: 463 AAMFEKGCKPNETTYVLLI 481
                +G   ++ TY +LI
Sbjct: 416 RMATSQGLHLDKVTYTILI 434



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 6/263 (2%)

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD----GKTEDAVDVLRAAKEKGLTPD 298
           G+  E   ++ E+ S GL   V T + ++    R         +A D + A    G+ PD
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGM-ARAAGGVRPD 180

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             S+  L+   C++GR + A   L  M + G   D      ++ AFC+ G      ++F 
Sbjct: 181 HRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFR 240

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++S++G PPN+ +Y+     L   G   +A  ++ EM+ KG++P+  T+ SLI  LC+ G
Sbjct: 241 RMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 419 MVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            ++ A  L + + +S+ ++P V +Y ++I G+CK  ++  +  +L  M E+G  PN  TY
Sbjct: 301 WMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360

Query: 478 VLLIEGIGYGGWRAEAMELANAL 500
             LI G   GG    A EL N +
Sbjct: 361 TTLIHGHCKGGSFDRAFELMNKM 383



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 5/193 (2%)

Query: 313 GRLDLAIEFLDYMISDGCLPDIV-NYNTILAAFCKN-GNADQALEIFEKLSDV--GCPPN 368
           GRL  A + L  + S G LP +V   N +L    ++ G    A E F+ ++    G  P+
Sbjct: 122 GRLREAADMLLELRSHG-LPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPD 180

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             S+  +       G    A  +++ M ++G   D  T   ++   CR G       L  
Sbjct: 181 HRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFR 240

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            M      P +++Y+  I G C+   + ++  VL  M  KG KPN  T+  LI+G+   G
Sbjct: 241 RMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 489 WRAEAMELANALV 501
           W   A  L   LV
Sbjct: 301 WMERAFRLFLKLV 313


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 225/478 (47%), Gaps = 28/478 (5%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
            RPN H          +  LI      GK+ E +  ++ M  +G +PD V+   L+    
Sbjct: 233 VRPNNH---------TYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLC 283

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +  +  +A  + + L + G +P V  Y  L+ G+     +   +  LD +   G SPD  
Sbjct: 284 KNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHH 343

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            +NIM  +   + MI+ A  +FD++ +    P V+ Y  LI A                 
Sbjct: 344 IFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA----------------- 386

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK G V  A      + + G  PD+  ++ L+  L  + KWE+ EKL  E++ +G+  
Sbjct: 387 -LCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRL 445

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N   ++IL+ +LCR+G+  +A  ++       + PD  SY+ L+  +C  GR+D A + L
Sbjct: 446 NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLL 505

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M+S G  PD   YNT+L  +CK    D A  +F ++   G  P V +YNT+   L+  
Sbjct: 506 DVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQI 565

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +   M++   + D  TY  +++ LCR+  VDEA  +   + S   +  + + 
Sbjct: 566 GRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTI 625

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           NI+I    K  R  +++++ A +   G  P+  TY L+ E +   G   E  EL +A+
Sbjct: 626 NIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 57/414 (13%)

Query: 109 YNALISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +  L+ G C A +++ A  +L  R+   G + +V++YNI++  LC+    E A ++   +
Sbjct: 131 FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM 190

Query: 168 LRD---NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
             D   +  P V+TYT +I                   G+CK  MV +A    + +  +G
Sbjct: 191 ADDGDGSHTPNVVTYTTVID------------------GLCKAQMVDRAKGVFQHMIDKG 232

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +P+  +Y  L+   L+ GKW+E  +++ EM + GL+P+ V Y++L+  LC++G+  +A 
Sbjct: 233 VRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEAR 292

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++  +   KG+ P    Y  L+  Y  +G L     FLD M+ +G  PD   +N +  A+
Sbjct: 293 NIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAY 352

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K    D+A+ IF+K+      P V +Y  +  AL   G    A+   ++M+++G+ PD 
Sbjct: 353 AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDI 412

Query: 405 ITYNSLIS--C---------------------------------LCRDGMVDEAVGLLVD 429
             ++SL+   C                                 LCR+G V EA  L+  
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDL 472

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           M     RP VISYN ++ G C T RI+E+ ++L  M   G KP+E TY  L+ G
Sbjct: 473 MLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHG 526



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 217/470 (46%), Gaps = 22/470 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+    +S++  G KP V +   L+  +  E   ++    ++++ + G  PD  
Sbjct: 284 KNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHH 343

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N + + + K   I+ A  + D++R +  SP VV Y  +I +LC  G ++ A   F+Q+
Sbjct: 344 IFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQM 403

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           + +   P +  ++ L+       + +KA KL  E+                  +C++G V
Sbjct: 404 INEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRV 463

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  +     +PDVISYN L+      G+ +E  KL+  M+S GL+P+  TY+ L
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +   C+  + +DA  + R    KGLTP   +Y+ ++    + GR   A E    MI++  
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR 583

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             DI  Y  IL   C+N   D+A ++F+ L       ++ + N M  AL   G K  A+ 
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + + + + G+ PD  TY  +   L ++G ++E   L   ME     P     N ++    
Sbjct: 644 LFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               I  +   L+ + EK      +T  +LI        RAE  +LA +L
Sbjct: 704 HRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYS----RAEYQQLAKSL 749


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 225/459 (49%), Gaps = 19/459 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           QF K++    +A     +L   + M  NG   D      LI  F Q   ++ +  V  +I
Sbjct: 72  QFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKI 131

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K  +P+   +N LI G C    I  A    D++ ++GF  D V+Y  +I  LC  G I
Sbjct: 132 LKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 191

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A ++  ++     +P  + Y ++I                    MCK  +V  AF   
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIID------------------NMCKAKLVNDAFDLY 233

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + ++   PD  + N L+     MG+ +E   L+ +MI   + P + T+SIL+ + C++
Sbjct: 234 SQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKE 293

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++A  +L    +K +  D  +Y+ L+  YC    ++ A +  D M S G + ++ +Y
Sbjct: 294 GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSY 353

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++   CK    D+A+ +FE++      PNV +YN++   L   G     L ++ EM  
Sbjct: 354 TTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHD 413

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G  P+ ITYNS++  LC++  VD+A+ LL +++    RP + +Y ++I G C++ ++ +
Sbjct: 414 RGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLED 473

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +V   +  KG   +  TY ++I+G    G    A+ L
Sbjct: 474 AQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALAL 512



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 213/428 (49%), Gaps = 19/428 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P ++   K++    + +  + A+ + + +E  G   D F +N LI+ F +     L+  V
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++  +GF P+ +T+N +I  LC +G I  A    D+++        ++Y  LI     
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN---- 183

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G +  A Q ++ ++ +  QP+ + YNM++  +       + 
Sbjct: 184 --------------GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 229

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L ++M+++ + P+  T + LI   C  G+ ++AV +L     + + P  Y++  L+ A
Sbjct: 230 FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDA 289

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           +CK+G++  A   L   +    + D+V YN+++  +C     ++A +IF+ ++  G   N
Sbjct: 290 FCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIAN 349

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V SY TM + L        A+ +  EM  + I P+ +TYNSLI  L + G +   + L+ 
Sbjct: 350 VQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVD 409

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M      P +I+YN I+   CK   ++++I +L  + ++G +P+  TY +LI+G+   G
Sbjct: 410 EMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSG 469

Query: 489 WRAEAMEL 496
              +A ++
Sbjct: 470 KLEDAQKV 477



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 26/463 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD     F  LIK     G   ++L F + +VA G   D V    LI    +  +   A+
Sbjct: 136 FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 195

Query: 93  RVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++++ ++ K  +P+   YN +I   CKA  +  A  +  ++ ++  SPD  T N +I   
Sbjct: 196 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGF 255

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G ++ A  +  +++ +N  P + T++IL+ A                   CK+G V 
Sbjct: 256 CIMGQLKEAVGLLHKMILENINPRMYTFSILVDA------------------FCKEGKVK 297

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +     +    DV++YN L+     + +  + + +   M SRG+  NV +Y+ +I
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           + LC+    ++AV++    + + + P+  +Y+ LI    K G++   ++ +D M   G  
Sbjct: 358 NGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQP 417

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+I+ YN+IL A CKN + D+A+ +   L D G  P++ +Y  +   L  SG    A  +
Sbjct: 418 PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKV 477

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             ++L KG   D  TY  +I   C  G+ D A+ LL  ME     P   +Y I+IL   +
Sbjct: 478 FEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFE 537

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLL------IEGIGYGG 488
               + + ++L  M  +G   +E +Y+ L      + G+G  G
Sbjct: 538 KDENDMAEKLLREMIARGL-LDEKSYIYLASKETGVMGMGAAG 579



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 129/268 (48%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F   L  +   P +I +N +L +L+          L  +M   G+  +  T++ILI+   
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G    +  V     +KG  P+A +++ LI   C  G +  A+ F D +++ G   D V
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y T++   CK G    AL++ +++      PN   YN +   +  +     A  + S+M
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           ++K I PD+ T NSLI   C  G + EAVGLL  M      P + +++I++  FCK  ++
Sbjct: 237 VAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKV 296

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  +L    +K    +  TY  L++G
Sbjct: 297 KEAKMMLGVTMKKDIILDVVTYNSLMDG 324



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 103/211 (48%)

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             K  TP    ++ ++S+  K      A+     M  +G + D   +N ++  F + G  
Sbjct: 62  HHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLN 121

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             +  +F K+   G  PN  ++NT+   L   G   +AL    +++++G   D+++Y +L
Sbjct: 122 SLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTL 181

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+ LC+ G +  A+ LL  ++    +P  + YN+II   CK + +N++ ++ + M  K  
Sbjct: 182 INGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI 241

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            P++ T   LI G    G   EA+ L + ++
Sbjct: 242 SPDDFTCNSLIYGFCIMGQLKEAVGLLHKMI 272



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 294 GLTPDAYS-YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           GL P + S Y  L   + +D   +L   F   +      P I+ +N IL++  K  +   
Sbjct: 31  GLFPSSISLYSQL--HHHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHST 88

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL + +++   G   +  ++N + +     G    +  +  ++L KG +P+ IT+N+LI 
Sbjct: 89  ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIK 148

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC  G + +A+     + +  F    +SY  +I G CK  RI  ++++L  +  K  +P
Sbjct: 149 GLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 208

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           N   Y ++I+ +       +A +L + +V+   IS D F
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVA-KRISPDDF 246


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 246/525 (46%), Gaps = 54/525 (10%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + F +    ++ LI    ++G   E+L     MV+ G KP +   + L+    + R    
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            + +++ +E  G  P+++ +   I    +A +I+ A  +L R+   G  PDVVTY ++I 
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           +LC+ G + +A ++F ++   + KP  +TY  L+      G  D   +   EM       
Sbjct: 306 ALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP 365

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +CK G V +AF  +  ++ +G  P++ +YN L+  LL + + +E  +L 
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425

Query: 253 TEMISRGLE-----------------------------------PNVVTYSILISSLCRD 277
             M S GLE                                   PN+V  +  + SL   
Sbjct: 426 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 485

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ E+A +     K+ GL PDA +Y+ L+  Y K GR+D AI+ L  M  +GC P++V  
Sbjct: 486 GRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVII 545

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++    K    D+A ++F+++ ++   P V +YNT+ + L   G    A  +   M++
Sbjct: 546 NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIA 605

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
               P+ I++N+L+ CLC++G VD A+ +L  M      P V++YN +I G  K  R+N 
Sbjct: 606 DDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 665

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  +   M +K   P+  T   L+ G+   G   +A  +A   V 
Sbjct: 666 AFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVH 709



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 227/490 (46%), Gaps = 27/490 (5%)

Query: 22  AETRPNTHLLSFDVKETQFMK--------LIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           A  R    ++ F++ + Q +K        + K  +  G   E+   +E M   G   +  
Sbjct: 134 AHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGY 193

Query: 74  MCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRL 132
               LI    +     +A++V   +   G +P +  Y+AL+    K   IE    +L  +
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
            S G  P++ T+ I I  L   G I+ A+ +  ++    C P V+TYT+LI A       
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDA------- 306

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +C  G +  A +    +++   +PD ++Y  LL    + G  +  ++  
Sbjct: 307 -----------LCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           +EM + G  P+VVT++ILI +LC+ GK ++A   L   K++G+ P+ ++Y+ LI    + 
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            RLD A+E  + M S G       Y   +  + K+G + +A++ FEK+   G  PN+ + 
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N    +L   G    A    + +   G+ PD ITYN L+ C  + G VD+A+ LL +ME 
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P V+  N +I    K  R++E+ ++   M E    P   TY  L+ G+G  G   E
Sbjct: 536 NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQE 595

Query: 493 AMELANALVS 502
           A  L   +++
Sbjct: 596 ATALFKGMIA 605



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 233/543 (42%), Gaps = 62/543 (11%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  + E   +   L  +     ++  I    ++G+  +++   E M  NG  P++V C 
Sbjct: 417 RLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACN 476

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             +    ++ +  +A      L+K G  PD   YN L+  + KA +++ A K+L  +   
Sbjct: 477 ASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+VV  N +I +L     ++ A+K+F ++      PTV+TY  L+     EG+  +A
Sbjct: 537 GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
             L   M                  +CK G V  A + +  +    C PDV++YN ++  
Sbjct: 597 TALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYG 656

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE----KG 294
           L+   +      L  +M  + + P+ VT   L+  + +DG+ EDA    R AKE     G
Sbjct: 657 LIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDA---FRVAKEFVHHVG 712

Query: 295 LTPDAYSYD-----------------------------------PLISAYCKDGR-LDLA 318
              D   ++                                   PL+   CK G+ +D  
Sbjct: 713 DHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAY 772

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
             FL    S    P +  YN+++    K    + A  +F K+ + GC P+V +YN    A
Sbjct: 773 NVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDA 832

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  SG       +  EML +G +P+ IT+N +I  L +   +D+A+ L  D+ S  F PT
Sbjct: 833 LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPT 892

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +Y  +I G  K  R+ E+ +    M + GC PN   Y +L+ G G  G    A EL  
Sbjct: 893 PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFR 952

Query: 499 ALV 501
            +V
Sbjct: 953 RMV 955



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 209/477 (43%), Gaps = 55/477 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
            + G+ D +L  +  M    C PDV+    +I    +E + N A  +   ++K   PD   
Sbjct: 624  KNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVT 683

Query: 109  YNALISGFCKANQIELANKVLDRL---------------------------RSRGFSPDV 141
               L+ G  K  +IE A +V                               +S  F+  +
Sbjct: 684  LCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESL 743

Query: 142  VTYNI---------MIGSLCSRGMIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQ 191
            V   I         ++  LC  G    A+ VF +L +  C  P++  Y  LI        
Sbjct: 744  VCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLID------- 796

Query: 192  TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       G+ K  +   A+     +++ GC PDV +YN+ L  L   GK +E   L
Sbjct: 797  -----------GLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              EM+ RG +PN +T++I+I  L +    + A+D+         +P  ++Y PLI    K
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
             GRL+ A +F + M+  GC+P+   YN ++  F K G+ + A E+F ++   G  P++ S
Sbjct: 906  LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            Y+ M   L   G    AL    E+   G++PD + YN +I+ L R   V+EA+ L  +M 
Sbjct: 966  YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1025

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +    P + +YN +IL       + E+ ++   +  KG +PN  TY  LI G    G
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 227/496 (45%), Gaps = 40/496 (8%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            + G+  E+    + M+A+ C P+ +    L+    +  + + A++++  + E    PDV 
Sbjct: 589  KEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVL 648

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV---F 164
             YN +I G  K N++  A  +  +++ +   PD VT   ++  +   G IE AF+V   F
Sbjct: 649  TYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEF 707

Query: 165  DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
               + D+   +   +  L+   ++E +  +++   + +                  +CK 
Sbjct: 708  VHHVGDHADGSF--WEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKH 765

Query: 208  GMVGQAFQFVRSLESRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A+     L    C  P + +YN L+  LL     E    L  +M + G  P+V T
Sbjct: 766  GKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFT 825

Query: 267  YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
            Y++ + +L + GK ++  D+      +G  P+  +++ +I    K   LD AI+    ++
Sbjct: 826  YNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLM 885

Query: 327  SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            S    P    Y  ++    K G  ++A + FE++ D GC PN   YN + +     GD  
Sbjct: 886  SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945

Query: 387  RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
             A  +   M+ +GI PD  +Y+ ++ CLC  G VD+A+    +++ +   P ++ YN++I
Sbjct: 946  TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL---------- 496
             G  +++R+ E++ +   M  +G  P+  TY  LI  +G  G   EA ++          
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065

Query: 497  -----ANALVSMHAIS 507
                  NAL+  H++S
Sbjct: 1066 PNVFTYNALIRGHSMS 1081



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 173/370 (46%), Gaps = 19/370 (5%)

Query: 112  LISGFCKANQ-IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+   CK  + ++  N  L   +S   +P +  YN +I  L    + E A+ +F ++   
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             C P V TY +                 LD +G  K G + + F     +  RGC+P+ I
Sbjct: 818  GCTPDVFTYNLF----------------LDALG--KSGKIKELFDLYEEMLFRGCKPNTI 859

Query: 231  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
            ++N+++  L+     ++   L  +++S    P   TY  LI  L + G+ E+A       
Sbjct: 860  THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             + G  P+   Y+ L++ + K G ++ A E    M+ +G  PD+ +Y+ ++   C  G  
Sbjct: 920  LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKV 979

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D AL  FE+L   G  P++  YN M + L  S     AL +  EM ++GI PD  TYN+L
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 411  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
            I  L   GMV+EA  +  +++     P V +YN +I G   +   + +  V   M   GC
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 471  KPNETTYVLL 480
            +PN  T+  L
Sbjct: 1100 RPNTGTFAQL 1109



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 234/553 (42%), Gaps = 91/553 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++ L+ +    G  D    F   M A+G  PDVV  T LI    +  K ++A   +++++
Sbjct: 335 YITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK 394

Query: 100 KYG-EPDVFAYNALISGFCKANQI----ELAN---------------------------- 126
           K G  P++  YN LI G  + N++    EL N                            
Sbjct: 395 KQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESG 454

Query: 127 ---KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
              K  +++++ G  P++V  N  + SL  +G +E A + F+ L +    P  ITY IL+
Sbjct: 455 KAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILM 514

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
           +     G+ D A+KLL EM                  + K   V +A++  + ++     
Sbjct: 515 RCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLA 574

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V++YN LL  L   G+ +E   L   MI+    PN ++++ L+  LC++G+ + A+ +
Sbjct: 575 PTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKM 634

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    E    PD  +Y+ +I    K+ R++ A  +L + +     PD V   T+L    K
Sbjct: 635 LFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF-WLFHQMKKVIYPDYVTLCTLLPGVIK 693

Query: 347 NGNADQALEIF-EKLSDVGCPPNVSSYNTMFSA--------------------------- 378
           +G  + A  +  E +  VG   + S +  +                              
Sbjct: 694 DGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDS 753

Query: 379 --------LWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                   L   G  + A  +  ++  S  I P    YNSLI  L +  + + A GL   
Sbjct: 754 VLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYK 813

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M++    P V +YN+ +    K+ +I E  ++   M  +GCKPN  T+ ++I G+     
Sbjct: 814 MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 490 RAEAMELANALVS 502
             +A++L   L+S
Sbjct: 874 LDKAIDLYYDLMS 886



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 18/353 (5%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N ++  L +   +E    VF+ + +   K ++ TY  + +   + G   +A   L++M
Sbjct: 124 TCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKM 183

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
              K G V   +                SY  L+  LL  G   E  K+   M+S G++P
Sbjct: 184 R--KVGFVLNGY----------------SYIGLIHLLLKSGFCREALKVYRRMVSEGIKP 225

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TYS L+ +L +    E  + +L+  +  GL P+ Y++   I    + G++D A   L
Sbjct: 226 SLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGIL 285

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   GC PD+V Y  ++ A C  G  + A E+F K+      P+  +Y T+       
Sbjct: 286 KRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDH 345

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD        SEM + G  PD +T+  LI  LC+ G VDEA G L  M+     P + +Y
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTY 405

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           N +I G  +  R++E++E+  +M   G +    TY+L I+  G  G   +A++
Sbjct: 406 NTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 129/273 (47%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y  + + L   G   E    + +M   G   N  +Y  LI  L + G   +A+ V R  
Sbjct: 159 TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +G+ P   +Y  L+ A  K   ++  +  L  M S G  P+I  +   +    + G  
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+A  I +++ D GC P+V +Y  +  AL ++G    A  +  +M +   +PD +TY +L
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITL 338

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +      G +D       +ME+  + P V+++ I+I   CK  +++E+   L  M ++G 
Sbjct: 339 LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGV 398

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            PN  TY  LI G+       EA+EL N++ S+
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESL 431



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 21/244 (8%)

Query: 30   LLSFDVKET--QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
            L+S D   T   +  LI    + G+ +E+  F E M+  GC P+  +   L+  F ++  
Sbjct: 884  LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943

Query: 88   SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
               A  +   + K G  PD+ +Y+ ++   C   +++ A    + L+  G  PD+V YN+
Sbjct: 944  VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003

Query: 147  MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
            MI  L     +E A  +FD++      P + TY  LI    + G  ++A K+ +E     
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEE----- 1058

Query: 207  KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
                         L+ +G +P+V +YN L+R     G  +    +  +M+  G  PN  T
Sbjct: 1059 -------------LQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGT 1105

Query: 267  YSIL 270
            ++ L
Sbjct: 1106 FAQL 1109



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 1/186 (0%)

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  Y TI       G   +A    EK+  VG   N  SY  +   L  SG    AL +  
Sbjct: 157 INTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYR 216

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M+S+GI+P   TY++L+  L +   ++  +GLL +MES   RP + ++ I I    +  
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL-VSMHAISRDTFK 512
           +I+E+  +L  M + GC P+  TY +LI+ +   G    A EL   +  S H   R T+ 
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336

Query: 513 RLNRTF 518
            L   F
Sbjct: 337 TLLDKF 342


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 23/449 (5%)

Query: 59  FIESMVAN----GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           F  SM+A     G +PD +    LIK      K  +A+   + +   G   D F+Y  LI
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           +G CK  +   A ++L ++  +    +VV YN +I SLC   ++  A++++ Q++     
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V+T++ LI                   G C  G + +AF   R +  +   PD  ++N
Sbjct: 241 PDVVTFSALIY------------------GFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +L+  L   G  +  + ++  M+  G+ PNVVTYS L+   C   +   A  VL    + 
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  P+A+SY  +I+ +CK   +D A+   + M   G  PD V YN+++   CK+G    A
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            E+ +++ D G P N+ +YN +  AL  +    +A+ ++ ++  +GI+PD  T+N LI  
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+ G +  A  +  D+ S  +     +YNI++ G CK    +E+  +L+ M + G  P+
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVS 502
             TY  LI+ + +     +A +L   +++
Sbjct: 523 AVTYETLIQALFHKDENEKAEKLLREMIA 551



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 211/413 (51%), Gaps = 19/413 (4%)

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ +   LE +G  PD+F +N LI+ +C   ++  A  ++ ++   G+ PD +T+N +I 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            LC  G ++ A    D +L         +Y  LI                   G+CK G 
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLIN------------------GLCKIGE 188

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
              A Q +R ++ +  + +V+ YN ++ +L       +  +L ++MI++ + P+VVT+S 
Sbjct: 189 TRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSA 248

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   C  G+ E+A  + R    K + PD Y+++ L+ A CK+G L  A   L  M+ +G
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEG 308

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P++V Y++++  +C     ++A  +   +S +G  PN  SY TM +          AL
Sbjct: 309 VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEAL 368

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + ++M  KGI PD++TYNSLI  LC+ G +  A  L+ +M        + +YN +I   
Sbjct: 369 SLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDAL 428

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           CK   ++++I ++  + ++G +P+  T+ +LI G+   G    A ++   L+S
Sbjct: 429 CKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 2/279 (0%)

Query: 229 VISYNMLLRTLL--NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           +I +N +L +L+  N   +     L   +   G+ P++ T++ILI+  C   +   A  +
Sbjct: 66  IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +    + G  PD  +++ LI   C +G++  A+ F D++++ G   D  +Y T++   CK
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCK 185

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G    AL++  K+       NV  YNT+  +L      I A  + S+M++K I PD +T
Sbjct: 186 IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           +++LI   C  G ++EA GL  +M      P   ++NI++   CK   +  +  +L  M 
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           ++G  PN  TY  L++G        +A  + N +  M A
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 230/486 (47%), Gaps = 23/486 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K    +G  D +   ++ M+A+GC+P+VV+ T LIK F Q  +   A+RV++ +++ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+F YN+LI G  KA +++ A   L  +   G  P+  TY   I          SA 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K   ++      P  +  T LI     + +  +A      M                 G+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K   V  A +  R +  +G  PDV SY +L+     +G  ++   +  EM+  GL PNV
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y++L+   CR G+ E A ++L     KGL P+A +Y  +I  YCK G L  A    D 
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G +PD   Y T++   C+  + ++A+ IF   +  GC  + + +N + + ++  G 
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK 781

Query: 385 KIRALGMISEMLSKGIE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                 +++ ++    +    P+++TYN +I  LC++G ++ A  L   M++    PTVI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y  ++ G+ K  R  E   V       G +P+   Y ++I      G   +A+ L + +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 501 VSMHAI 506
            + +A+
Sbjct: 902 FAKNAV 907



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 18/380 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   AY +LI G+C+   +    ++L  ++ R       TY  ++  +CS G ++ A+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             +++   C+P V+ YT LI+  +   +   AM++L EM                  + +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM------------------KEQ 481

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD+  YN L+  L    + +E    + EM+  GL+PN  TY   IS      +   A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
              ++  +E G+ P+      LI+ YCK  ++  A      M+  G L D   Y  ++  
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             KN   D A EIF ++   G  P+V SY  + +     G+  +A  +  EM+ +G+ P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I YN L+   CR G +++A  LL +M      P  ++Y  II G+CK+  + E+  +  
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG  P+   Y  L++G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG 741



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 220/487 (45%), Gaps = 21/487 (4%)

Query: 45  KRSFRAGKF--DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++ FR      D +L   ESM+  G  P       LI    + ++   A  ++  ++  G
Sbjct: 248 EKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D   Y+ LI G  K    + A  ++  + S G +     Y+  I  +   G++E A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD ++     P    Y  LI+    E    +  +LL EM                 GM
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A+  V+ + + GC+P+V+ Y  L++T L   ++ +  +++ EM  +G+ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ LI  L +  + ++A   L    E GL P+A++Y   IS Y +      A +++  
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G LP+ V    ++  +CK     +A   +  + D G   +  +Y  + + L+ +  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  EM  KGI PD  +Y  LI+   + G + +A  +  +M      P VI YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           ++ GFC++  I ++ E+L  M  KG  PN  TY  +I+G    G  AEA  L + +  + 
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLK 726

Query: 505 AISRDTF 511
            +  D+F
Sbjct: 727 GLVPDSF 733



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 182/405 (44%), Gaps = 38/405 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +  K  E+     SMV  G   D    T L+   F+  K + A  +   +   G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF+Y  LI+GF K   ++ A+ + D +   G +P+V+ YN+++G  C  G IE A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ D++      P  +TY  +I      G   +A +L DEM +  KG+V  +F +   ++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPDSFVYTTLVD 740

Query: 222 S------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE-- 261
                              +GC      +N L+  +   GK E    L TE+++R ++  
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE----LKTEVLNRLMDGS 796

Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
                 PN VTY+I+I  LC++G  E A ++    +   L P   +Y  L++ Y K GR 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPPNVS 370
                  D  I+ G  PD + Y+ I+ AF K G   +AL + +++      D GC  ++S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +   + S     G+   A  ++  M+     PD  T   LI+  C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 11/399 (2%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   +  L  G+     IE A  V          P +    +++ +L     ++  + V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQT----DKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             ++  N    V TY +LI A    G      D   K   E       + G A +   S+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG-ALKLKESM 268

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  P   +Y++L+  L  + + E+ + L+ EM S G+  +  TYS+LI  L +    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  ++      G+    Y YD  I    K+G ++ A    D MI+ G +P    Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  +C+  N  Q  E+  ++       +  +Y T+   + SSGD   A  ++ EM++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P+ + Y +LI    ++    +A+ +L +M+     P +  YN +I+G  K +R++E+  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            L  M E G KPN  TY   I G        EA E A+A
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGY------IEASEFASA 541



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISR-------------------GLEPNVVTYSILI 271
           S++ L   L N G +E+   ++  MI R                   G   + V + IL 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
                 G  E+AV V  ++    L P       L+ A  +  RLDL  +    M+    +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D+  Y+ ++ A C+ GN     ++  K            + T  + L   G    AL +
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTE--------KEFRT--ATLNVDG----ALKL 264

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+ KG+ P + TY+ LI  LC+   +++A  LLV+M+S        +Y+++I G  K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 452 TRRINESIEVLAAMFEKG 469
            R  + +  ++  M   G
Sbjct: 325 GRNADAAKGLVHEMVSHG 342


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 226/467 (48%), Gaps = 24/467 (5%)

Query: 42  KLIKRS-----FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +LI RS      +AG  D+++   + M  + C+   +   + I       + + A     
Sbjct: 9   RLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYS 68

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +   G     F Y+  I+G CK       +++L  + +    PD+  +NI +  L   G
Sbjct: 69  QMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            I+ A +VF++++++  KP V+TYTI+I       + D A++   +M             
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
               G+C    V  A++ +  +   G  +   + YN L+      G+ ++ + + + M  
Sbjct: 189 AIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRR 248

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G EP++VTY++ ++  C +   +DA  +L+  +  G+ PD YSY+ L+   CK    D 
Sbjct: 249 NGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDK 308

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   +   +    L D+V+YNTI+ AFCK G+   A ++FE++   G PP+V ++     
Sbjct: 309 AYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIK 368

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           A    G    A  ++ +M   G+ PD I Y ++I  LC+ G V+ A  +  DM      P
Sbjct: 369 AFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISP 428

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            VIS+N +I GFCK  R++E++ +   M  +G  P+E TY L+I G+
Sbjct: 429 DVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGL 475



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 214/435 (49%), Gaps = 29/435 (6%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           DE L+ +E++    C PD+      +   F E + + A+ V E + K G +PDV  Y  +
Sbjct: 99  DELLHDMETL---NCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTII 155

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK-VFDQLLRDN 171
           I G CK  + + A +    +  +GFSPD      ++  LC    ++ A++ + D +    
Sbjct: 156 IHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGR 215

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR-GCQPDVI 230
            K + + Y  LI                   G C+ G + +A Q ++S   R GC+PD++
Sbjct: 216 VKLSTLVYNALIS------------------GFCRAGRIDKA-QAIKSFMRRNGCEPDLV 256

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN+ L    +    ++ +KL+  M   G+EP+V +Y+ L+  +C+ G   D   +L   
Sbjct: 257 TYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK-GNCPDKAYLLMTN 315

Query: 291 K--EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           K   KGL  D  SY+ +I A+CK G    A +  + M   G  PD+V +   + AF   G
Sbjct: 316 KMWPKGLC-DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKG 374

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + + A ++ ++++++G  P+   Y T+   L  SG    A  +  +M+ +GI PD I++N
Sbjct: 375 SFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFN 434

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI+  C+   V EA+ L  +M++    P  ++Y +II G  + ++I+ +  V   M +K
Sbjct: 435 ALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDK 494

Query: 469 GCKPNETTYVLLIEG 483
           G   +      LI G
Sbjct: 495 GFTLDRAIAQTLIRG 509



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 19/383 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV 106
           F  G+ D +L   E +V NG KPDVV  T +I    + +K + A++   +++ K   PD 
Sbjct: 125 FVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDN 184

Query: 107 FAYNALISGFCKANQIELANK-VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            A  A++ G C   +++LA + ++D ++S       + YN +I   C  G I+ A  +  
Sbjct: 185 KACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKS 244

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            + R+ C+P ++TY + +     E   D A KLL  M                 G+CK  
Sbjct: 245 FMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGN 304

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A+  + +        DV+SYN +++    +G      KL  EM  +G+ P+VVT++
Sbjct: 305 CPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFT 364

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           I I +    G    A  +L    E GL+PD   Y  +I   CK G++++A      M+  
Sbjct: 365 IFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQ 424

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD++++N ++  FCK     +A+ ++E++ + G  P+  +Y  +   L        A
Sbjct: 425 GISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIA 484

Query: 389 LGMISEMLSKGIEPDEITYNSLI 411
             +  +M+ KG   D     +LI
Sbjct: 485 CMVWGQMMDKGFTLDRAIAQTLI 507



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 150/289 (51%), Gaps = 21/289 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    RAG+ D++      M  NGC+PD+V     +  F  E   + A ++++++E+ G
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285

Query: 103 -EPDVFAYNALISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
            EPDV++YN L+ G CK N  + A  ++ +++  +G   DVV+YN +I + C  G   SA
Sbjct: 286 IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLC-DVVSYNTIIKAFCKIGDTTSA 344

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           +K+F+++ +    P V+T+TI I+A + +G  + A KLLD+M                  
Sbjct: 345 YKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQM------------------ 386

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  PD I Y  ++  L   GK E    +  +M+ +G+ P+V++++ LI+  C+  + 
Sbjct: 387 TEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRV 446

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            +A+ +    + +G  PD  +Y  +I    ++ ++ +A      M+  G
Sbjct: 447 SEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKG 495



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 137/286 (47%), Gaps = 1/286 (0%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G  K G++ +A Q    +    C+   I YN  +  L+N  +++      ++M +RG   
Sbjct: 18  GYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSL 77

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +  TYS  I+ LC+        ++L   +     PD ++++  +     +GR+DLA+E  
Sbjct: 78  SSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVF 137

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + ++ +G  PD+V Y  I+   CK    D A++ +  +   G  P+  +   +   L   
Sbjct: 138 EKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDG 197

Query: 383 GDKIRALGMISEMLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                A  +I +++  G ++   + YN+LIS  CR G +D+A  +   M      P +++
Sbjct: 198 RKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVT 257

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           YN+ +  FC    ++++ ++L  M   G +P+  +Y  L++GI  G
Sbjct: 258 YNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKG 303



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 36/256 (14%)

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           + L  + + Y   I+   + G  + AV V     +      +  Y+  I       R DL
Sbjct: 3   QSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A  +   M + G       Y+  +   CK  N     E+   +  + C P++ ++N    
Sbjct: 63  ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLH 122

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR--------------------- 416
            L+  G    AL +  +++  G +PD +TY  +I  +C+                     
Sbjct: 123 LLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182

Query: 417 -------------DGM-VDEAVGLLVD-MESTRFRPTVISYNIIILGFCKTRRINESIEV 461
                        DG  VD A  L++D M+S R + + + YN +I GFC+  RI+++  +
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242

Query: 462 LAAMFEKGCKPNETTY 477
            + M   GC+P+  TY
Sbjct: 243 KSFMRRNGCEPDLVTY 258



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F   IK     G F+ +   ++ M   G  PD +  T +I    +  K   A  +  +++
Sbjct: 363 FTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMV 422

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PDV ++NALI+GFCK +++  A  + + +++RG  PD VTY ++IG L     I 
Sbjct: 423 EQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKIS 482

Query: 159 SAFKVFDQLL 168
            A  V+ Q++
Sbjct: 483 IACMVWGQMM 492


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 17/415 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           VF YN +I   CK   +E+A  +  +++  GF+PD+VTYN +I      G+++    +F+
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 314

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           Q+   +C P VITY  LI       +  KA + L EM                   CK+G
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M+ +A +F   +      P+  +Y  L+      G   E  KL+ E++  G++ NVVTY+
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            L+  LC +G+ ++A +V RA    G+ P+  +Y  L+  + K   ++ A + L  M   
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PD++ Y TIL   C     ++A  +  ++ + G   N   Y T+  A + SG    A
Sbjct: 495 CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 554

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++ EML  G+   E+TY +LI  LC+ G+V EA+     M     +P V  Y  ++ G
Sbjct: 555 LTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDG 614

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            CK      + ++   M +KG  P++  Y  LI+G    G   EA+ L + ++ +
Sbjct: 615 LCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 669



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 232/477 (48%), Gaps = 18/477 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  + +      M   G  PD+V    LI    +    ++ + + E ++    +PDV 
Sbjct: 267 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 326

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ FCK  ++  A + L  +++ G  P+VVTY+  I + C  GM++ A K F  +
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            R    P   TYT LI A    G   +A+KL++E+                 G+C++G +
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +  R++ + G  P+  +Y  L+   +   + E  + ++ EM  + ++P+++ Y  +
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 506

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC + + E+A  ++   KE G+  +A  Y  L+ AY K G+   A+  L+ M+  G 
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +   V Y  ++   CK+G   +A+  F ++S++G  PNV+ Y  +   L  +     A  
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EML KG+ PD+I Y +LI    + G + EA+ L   M        + +Y  +I G  
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
            + ++ ++  +L  M  KG  P+E  Y+ LI+     G   EA+EL N +     I+
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 167/353 (47%), Gaps = 25/353 (7%)

Query: 151 LCSRGMIESAFKVFDQLL--RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
           +C R ++ S + VFD L   R+ C P    +  L  A             L E+GM ++ 
Sbjct: 159 ICLRRVLPS-WDVFDLLWATRNVCVPGFGVFDALFSA-------------LIELGMLEEA 204

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              + F  +R        P   S N LL  L  +G+ +   K   +M + G++ +V TY+
Sbjct: 205 --SECFLKMRKFRVF---PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 259

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           I+I  LC++G  E A  +    KE G TPD  +Y+ LI  + K G LD  I   + M   
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C PD++ YN ++  FCK     +A E   ++   G  PNV +Y+T   A    G    A
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           +    +M    + P+E TY SLI   C+ G + EA+ L+ ++     +  V++Y  ++ G
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            C+  R+ E+ EV  AM   G  PN+ TY  L+ G      +A+ ME A  ++
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF----IKAKEMEYAKDIL 488



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 18/354 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI  + +AG   E+L  +E ++  G K +VV  T L+    +E +  +A  V  
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +   G  P+   Y AL+ GF KA ++E A  +L  ++ +   PD++ Y  ++  LC+  
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +E A  +  ++         + YT L+ A    GQ  +A+ LL+EM             
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G+V +A      +   G QP+V  Y  L+  L     +E  +KL  EM+ +
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDK 634

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+ P+ + Y+ LI    + G  ++A+++     E G+  D ++Y  LI      G++  A
Sbjct: 635 GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
              LD MI  G LPD V Y  ++  +   G  D+ALE+  +++  G    +S +
Sbjct: 695 RNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 183/407 (44%), Gaps = 18/407 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    ++AL S   +   +E A++   ++R     P   + N ++  L   G  + + K 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F  +     K +V TY I+I                    +CK+G +  A      ++  
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDY------------------LCKEGDLEMARSLFTQMKEA 284

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD+++YN L+     +G  +E   +  +M     +P+V+TY+ LI+  C+  +   A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            + L   K  GL P+  +Y   I A+CK+G L  AI+F   M      P+   Y +++ A
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK GN  +AL++ E++   G   NV +Y  +   L   G    A  +   ML+ G+ P+
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           + TY +L+    +   ++ A  +L +M+    +P ++ Y  I+ G C   R+ E+  ++ 
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
            + E G   N   Y  L++     G   EA+ L   ++ +  I+ + 
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 146/295 (49%), Gaps = 1/295 (0%)

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P    ++ L   L+ +G  EE  +   +M    + P   + + L+  L + G+ + + 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
              +     G+    ++Y+ +I   CK+G L++A      M   G  PDIV YN+++   
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K G  D+ + IFE++ D  C P+V +YN + +         +A   + EM + G++P+ 
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY++ I   C++GM+ EA+   VDM      P   +Y  +I   CK   + E+++++  
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH-AISRDTFKRLNRTF 518
           + + G K N  TY  L++G+   G   EA E+  A+++   A +++T+  L   F
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 213/455 (46%), Gaps = 49/455 (10%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+   +      A R + ++ + G  PD F +N+LI G+C+  Q+++A  + D++  RG
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN------------------------- 171
           FS D V+Y  +I   C  G ++ A ++F +L + +                         
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQ 254

Query: 172 ------CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
                  +P    Y  L+     E + ++A K+L+EM                   C++G
Sbjct: 255 KMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREG 314

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            +  A +   S++ +GC+P+V +YN +++   N+GK  +   L+ +M   G+EP+VVTY+
Sbjct: 315 RMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYN 374

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LI   C DG  E A  +LR  +  GL  D Y+Y+ LI A CK G++D A    D +   
Sbjct: 375 LLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+ V +NT++   CK G  D A    EK+   GC P+  +Y+     L  +      
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L  I EML K ++P  + Y  +I  L ++     A  +   M S    P V++Y   +  
Sbjct: 495 LSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA 554

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +C   R++E+  V+  M + G   +   Y  LI+G
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 216/451 (47%), Gaps = 23/451 (5%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F      +  LI+     G+ DE+L     +     +PD+     L+K     R+  
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGE 247

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           + + +++ +++ G  P   AY AL+  +C+  + E A K+L+ +   G  P  VT   ++
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
            + C  G +  A +VF+ +    C+P V TY  ++Q     G+  KAM LLD+M  C   
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMREC--- 364

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                          G +PDV++YN+L+R     G  E   +L+  M   GL  +  TY+
Sbjct: 365 ---------------GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYN 409

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LI +LC+ GK ++A  +    + +G+ P++ +++ +I+  CK G+ D+A  FL+ M+S 
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC PD   Y+  +   CK   + + L   +++      P+  +Y  +   L+   +   A
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  +M+S G  PD +TY + +   C +G + EA  ++++M+        ++YN +I G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
                + + ++ +L  M      PN  T+ +
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFI 620



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 192/409 (46%), Gaps = 24/409 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGEPDVFA--YNALISGFCKANQIELANKVLDRLRSR 135
           L+  F +   +   +R+   +  +G P      YNALI   C+   +  A + L  +   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ PD  T+N +I   C    ++ A  +FD++         ++Y  LI+           
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIE----------- 207

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C+ G V +A +  R LE    QPD+ ++  L++ L +  + EEG  ++ +M
Sbjct: 208 -------GFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKM 256

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G  P    Y+ L+   CR+ K E+A  +L    + GL P A +   +++AYC++GR+
Sbjct: 257 KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRM 316

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+   + M   GC P++  YN ++  FC  G   +A+ + +++ + G  P+V +YN +
Sbjct: 317 SGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLL 376

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G    A  ++  M   G+  D+ TYN LI  LC+ G VDEA  L   +E    
Sbjct: 377 IRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           RP  +++N +I G CK  + + +   L  M   GC P+  TY   IE +
Sbjct: 437 RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 225/517 (43%), Gaps = 75/517 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    R  K +E+   +  M  NG  P  V CT ++  + +E + + AVRV E ++
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V+ YNA++ GFC   ++  A  +LD++R  G  PDVVTYN++I   C  G IE
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           SAF++   +  +       TY +LI A    G+ D+A  L D +                
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G    A  F+  + S GC PD  +Y+  +  L       EG   + EM+ + ++
Sbjct: 448 NGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVK 507

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ V Y+I+I  L ++     A  +       G +PD  +Y   + AYC +GRL  A   
Sbjct: 508 PSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENV 567

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF----- 376
           +  M   G + D + YNT++      G  D A+ I + ++ V   PN   + T F     
Sbjct: 568 VMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN---HFTFFILLRH 624

Query: 377 --------------SALW------------------SSGDKIRALGMISEMLSKGIEPDE 404
                         +++W                  S     RA   I E  S+    DE
Sbjct: 625 LLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDE 684

Query: 405 IT-----------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           +T                 Y SL++C C+  M  +A  LL  M    F P +ISY  ++ 
Sbjct: 685 VTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLS 744

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           GF    + + + E+   +  K    +E  + ++I+G+
Sbjct: 745 GFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGL 781



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 58/393 (14%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           + +L++ F +     L  ++   +   G  +P   TYN +I +LC R  +  A +    +
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R   +P   T+  LI       Q D A  L D+M +                  RG   
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPL------------------RGFSQ 197

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D +SY  L+      G+ +E  +L  E+     +P++ T++ L+  LC   + E+ + +L
Sbjct: 198 DAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLCDARRGEEGLYML 253

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  KE G  P   +Y  L+  +C++ + + A + L+ M  +G +P  V    ++ A+C+ 
Sbjct: 254 QKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCRE 313

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A+ +FE +   GC                                   EP+  TY
Sbjct: 314 GRMSGAVRVFESMKLKGC-----------------------------------EPNVWTY 338

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+++   C  G V +A+ LL  M      P V++YN++I G C    I  +  +L  M  
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEG 398

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            G   ++ TY +LI+ +   G   EA  L + L
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGL 431



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 121/317 (38%), Gaps = 34/317 (10%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E L FI+ M+    KP  V  T +I + F+ER    A R+   +   G  PDV  Y   +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
             +C   ++  A  V+  ++  G   D + YN +I    S G  + A  +   +      
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 174 PTVITYTILIQATMLEGQTD----------KAMKLLDEMG----MCKKGMVGQAFQFVRS 219
           P   T+ IL++  +     +          K ++L D       M K  +   A  ++  
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 220 LE--SRGCQPDVIS-----------------YNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           LE  S   + D ++                 Y  L+     +  + +   L+  MI  G 
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGF 732

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN+++Y  L+S    +G+ + A ++ R  + K    D   +  +I    + G  D+  +
Sbjct: 733 LPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHD 792

Query: 321 FLDYMISDGCLPDIVNY 337
            +  +    C P    Y
Sbjct: 793 MISILEQMKCKPSDETY 809



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 1/134 (0%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + DE    +  M  +    +  + T L+  F + R    A  ++  +  +G  P++ +Y 
Sbjct: 681 RLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQ 740

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+SGF    Q + A ++   LR + ++ D + + I+I  L  +G  +    +   L + 
Sbjct: 741 YLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQM 800

Query: 171 NCKPTVITYTILIQ 184
            CKP+  TY +L +
Sbjct: 801 KCKPSDETYAMLTE 814



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 18/164 (10%)

Query: 94  VMEILEKYGEPD-VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           + E+++K   P    AY A++ GF +  +++    ++  ++      +   Y  ++   C
Sbjct: 653 LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC 712

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL----------DEM 202
              M   A+ +   ++     P +I+Y  L+     EGQ D+A ++           DE+
Sbjct: 713 KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEI 772

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
                  G+ ++G        +  LE   C+P   +Y ML   L
Sbjct: 773 VWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 224/481 (46%), Gaps = 38/481 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ D++   IE M   G + +      LI  F ++ + +KA+++ + ++K G  PDV 
Sbjct: 280 KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 339

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ALI G C   +IE A  +L  ++  G  PD+   + +I + CS  +    +++ ++ 
Sbjct: 340 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYCSEEV--DIYRLIEER 396

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------ 202
           L D + +  ++ Y  ++   +     DKA  LL  M                        
Sbjct: 397 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPD 456

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+C  G +  A    R +   GC+ +V+ YN L+  L N  + EE   L+ 
Sbjct: 457 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 516

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM   G  P   T++ +   LCR      A+D++R  +  G  P    Y  L+   CK  
Sbjct: 517 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R   A  FL  M+ +G LPDIV Y+  +  F K    DQALEIF  +   G  P+V +YN
Sbjct: 577 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ +          A  ++ EM++KG+ P  +TYN LI   C++G +D+A   L  M   
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGK 696

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P VI+Y  +I G C   R +++I +   M  KGC PN  +++ LI G+   GW   A
Sbjct: 697 EREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 756

Query: 494 M 494
           +
Sbjct: 757 L 757



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 222/510 (43%), Gaps = 68/510 (13%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L   + E  F  LI    R  + D++L   + M  +G  PDV +   LI     +++  K
Sbjct: 297 LGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEK 356

Query: 91  AVRVMEILEKYG-EPDV---------------------------------FAYNALISGF 116
           A+ ++  +++ G +PD+                                   YN++++G 
Sbjct: 357 ALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGL 416

Query: 117 CKANQIELANKVLDRLRSRGFS----------------PDVVTYNIMIGSLCSRGMIESA 160
                ++ A  +L  +    ++                PD  +++I+I  LC+ G ++ A
Sbjct: 417 VNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLA 476

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----------------- 203
             +F  ++R  CK  V+ Y  LI       + ++   LL EM                  
Sbjct: 477 LSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC 536

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C++  V  A   VR +   G +P +  Y +L++ L    +  E    + EM+  G  P+
Sbjct: 537 LCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPD 596

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +V YS  I    +    + A+++ R    +G  PD  +Y+ LI+ +CK  R+  A + LD
Sbjct: 597 IVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILD 656

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M++ G +P +V YN ++  +CKNG+ DQA     ++      PNV +Y T+   L ++G
Sbjct: 657 EMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAG 716

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A+ + +EM  KG  P+ I++ +LI  LC+ G  D A+    +M   R  P  I Y 
Sbjct: 717 RPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM-GERETPDTIVYV 775

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            +I  F   +    + E+L  M  KG  P+
Sbjct: 776 ALITSFISNKNPTLAFEILKEMVAKGKFPD 805



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 29/388 (7%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
            RP+T         T F  +I      GK D +L     MV  GCK +V++   LI K  
Sbjct: 453 VRPDT---------TSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 503

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
              +  +   +++ ++  G  P  F +N++    C+   +  A  ++  +R  G  P + 
Sbjct: 504 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIK 563

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y +++  LC R     A     +++R+   P ++ Y+  I                   
Sbjct: 564 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID------------------ 605

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G  K   V QA +  R + +RG  PDV++YN L+     + +  E   ++ EM+++GL P
Sbjct: 606 GFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 665

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +VVTY++LI   C++G  + A   L     K   P+  +Y  LI   C  GR D AI   
Sbjct: 666 SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLW 725

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   GC P+ +++  ++   CK G  D AL  F ++ +   P  +  Y  + ++  S+
Sbjct: 726 NEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIV-YVALITSFISN 784

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSL 410
            +   A  ++ EM++KG  PD +  N L
Sbjct: 785 KNPTLAFEILKEMVAKGKFPDPLDKNDL 812



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 46/419 (10%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ +++N L+    K+  I+L    L  +   G+ PD  T   ++ + C+    + A  V
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256

Query: 164 FDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           F+++  R      V++  +L  +    G+ DKA +L++ M                 G  
Sbjct: 257 FNEIYGRGWVDGHVLSILVLTFSKC--GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFV 314

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++  V +A Q  + ++  G  PDV  Y+ L+  L    + E+   L++EM   G++P++ 
Sbjct: 315 RQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQ 374

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS----YDPLISAYCKDGRLDLAIEF 321
             S LI+         + VD+ R  +E+    D  +    Y+ +++       +D A   
Sbjct: 375 ILSKLIAY------CSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYL 428

Query: 322 LD----------------YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           L                 +M+ +   PD  +++ ++   C  G  D AL +F  +  VGC
Sbjct: 429 LRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGC 488

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             NV  YN +   L +S        ++ EM   G  P + T+NS+  CLCR   V  A+ 
Sbjct: 489 KQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALD 548

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++ +M      P +  Y +++   CK +R  E+   LA M  +G  P+   Y   I+G 
Sbjct: 549 MVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGF 607



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 160/399 (40%), Gaps = 69/399 (17%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFD-QLLRDNCKPTVITYTILIQATMLEGQTDK 194
           GF+ +  TYN M   L S     +   +    ++   C  +       I+     G  ++
Sbjct: 123 GFNHNCYTYNAMASCL-SHARQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEE 181

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           A  L D++ M                  R C P+  S+N LL  +   G  +  E  + E
Sbjct: 182 ANLLFDQVKM-----------------MRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKE 224

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M   G EP+  T + ++ + C   K + A+ V      +G   D +    L+  + K G 
Sbjct: 225 MCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGE 283

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A E ++ M   G   +   +  ++  F +    D+AL++F+K+   G  P+VS Y+ 
Sbjct: 284 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDA 343

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPD------------------------------- 403
           +   L +  +  +AL ++SEM   GI+PD                               
Sbjct: 344 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTE 403

Query: 404 --EITYNSLISCLCRDGMVDEAVGLLVDM---------ESTRF-------RPTVISYNII 445
              + YNS+++ L     VD+A  LL  M         E  +F       RP   S++I+
Sbjct: 404 AMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIV 463

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G C T +++ ++ +   M   GCK N   Y  LI+ +
Sbjct: 464 IDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL 502


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 216/457 (47%), Gaps = 19/457 (4%)

Query: 51  GKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           G  D +L F  + +  + C PDV  C  L+    +  K   A +V  E++++ GE D + 
Sbjct: 115 GLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYT 174

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
              ++ G CK  ++E   K++++   RG  P++V YN +I   C +G  E A  +F +L 
Sbjct: 175 VCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELK 234

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                PTV TY  +I     +G+ +   KLL EM                    K G   
Sbjct: 235 MKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRI 294

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   V  +   GC PD+ +YN+L+    + G+  + E+L+ + I RGL PN V+Y+ LI
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            + C+ G+   A+D+L    E+G  PD  +Y  LI      G +D+A+   + M+  G L
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVL 414

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   YN +++  CK G    A  +  ++ D    P+     T+       GD   A  +
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
               + KGI+P  + YN++I   C+ GM+ +A+     M      P   +Y+ II G+ K
Sbjct: 475 FELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK 534

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
              ++ ++ +   M +  CKPN  TY LLI G    G
Sbjct: 535 MNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 218/460 (47%), Gaps = 18/460 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   + GK ++    IE     GC P++V    LI  + ++  + +A  + + L+  G
Sbjct: 178 MVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKG 237

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P V  Y A+I+GFCK  + E+ +K+L  +  RG    +  YN +I +    G    A 
Sbjct: 238 FLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAA 297

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGM 204
                +++  C P + TY ILI  +   G+  KA +LL++                    
Sbjct: 298 DTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNY 357

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G   +A   +  +  RG +PD+++Y  L+  L+  G+ +    +  +M+ +G+ P+ 
Sbjct: 358 CKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDA 417

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y++L+S LC+ G+   A  +L    ++ + PDA+    L+  + + G  + A +  + 
Sbjct: 418 NIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFEL 477

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            I  G  P +V YN ++  +CK G    AL  F+++      P+  +Y+T+        D
Sbjct: 478 TIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMND 537

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL M   M+    +P+ +TY  LI+  C  G ++ A      M S R +P V++Y I
Sbjct: 538 LHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTI 597

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +I  FCK   + ++      M  + C PN+ TY  L+ G+
Sbjct: 598 LIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 216/473 (45%), Gaps = 36/473 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GKF+     +  M   G    + +   +I   F+     +A   +  + K G +PD+ 
Sbjct: 254 KKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+G C   ++  A ++L++   RG  P+ V+Y  +I + C +G    A  +  ++
Sbjct: 314 TYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKM 373

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                KP ++TY  LI   ++ G+ D A+ + ++M                 G+CKKG +
Sbjct: 374 SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRL 433

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +  +  +   PD      L+   +  G +EE +KL    I +G++P VV Y+ +
Sbjct: 434 PAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAM 493

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ G  +DA+   +   +   +PD ++Y  +I  Y K   L  A+     M+   C
Sbjct: 494 IKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGAC 553

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y  ++  FC +G+ ++A + F+++  +   PNV +Y  +        +  +A  
Sbjct: 554 KPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACS 613

Query: 391 MISEMLSKGIEPDEITYNSLISCLC---------------RDGMVDEAVGLLVDMESTRF 435
              +ML +   P+++TYN L++ L                 + +V E+ G+++   S  +
Sbjct: 614 FFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMI---SDGW 670

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
                SYN I++  C+ + +  ++ +   M  KG  P+  + V L+ G+   G
Sbjct: 671 DRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEG 723



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 179/387 (46%), Gaps = 18/387 (4%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR-DNCKPTVITYTILIQAT 186
           +L  ++S+   P    ++++I      G+++ A + +   ++  +C P V +   L+   
Sbjct: 88  LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
           +  G+ + A K+ DEM                 G+CK+G V   ++ +     RGC P++
Sbjct: 148 VKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNI 207

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN L+      G  E    L  E+  +G  P V TY  +I+  C+ GK E    +L  
Sbjct: 208 VFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVE 267

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E+GL    + Y+ +I A  K G    A + + +MI  GC PD+  YN ++   C  G 
Sbjct: 268 MSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGE 327

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A ++ E+    G  PN  SY  +       G+ +RAL ++ +M  +G +PD +TY +
Sbjct: 328 VHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAA 387

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  L   G VD A+ +   M      P    YN+++ G CK  R+  +  +LA M ++ 
Sbjct: 388 LIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN 447

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL 496
             P+      L++G    G   EA +L
Sbjct: 448 VAPDAFITATLVDGFIRHGDFEEAKKL 474



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 1/295 (0%)

Query: 208 GMVGQAFQFVRS-LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           G+V +A +F R+ ++   C PDV S N LL  L+  GK E   K+  EM+ R  E +  T
Sbjct: 115 GLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYT 174

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
             I++  LC++GK ED   ++     +G  P+   Y+ LI  YCK G  + A      + 
Sbjct: 175 VCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELK 234

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G LP +  Y  I+  FCK G  +   ++  ++S+ G   ++  YN +  A +  G +I
Sbjct: 235 MKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRI 294

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A   +  M+  G +PD  TYN LI+  C  G V +A  LL         P  +SY  +I
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +CK      ++++L  M E+G KP+  TY  LI G+   G    A+ + N +V
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV 409



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 196/450 (43%), Gaps = 47/450 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI  S   G+  ++   +E  +  G  P+ V  T LI  + ++ +  +A+ ++ ++ E+ 
Sbjct: 318 LITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERG 377

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+  Y ALI G   A ++++A  V +++  +G  PD   YN+++  LC +G + +A 
Sbjct: 378 HKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAK 437

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  ++L  N  P       L+   +  G  ++A KL +                   G 
Sbjct: 438 VLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGY 497

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK GM+  A    + +      PD  +Y+ ++   + M       ++   M+    +PNV
Sbjct: 498 CKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV 557

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY++LI+  C  G    A    +      L P+  +Y  LI  +CK   L  A  F + 
Sbjct: 558 VTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQ 617

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+ + CLP+ V YN ++       N D  +             N  S  T  S +     
Sbjct: 618 MLMEKCLPNDVTYNYLMNGL--TNNVDFVIS------------NQRSEQTENSLV----- 658

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            + + GM   M+S G +    +YNS++ CLC+  MV  A+ L   M S  F P  +S   
Sbjct: 659 -LESFGM---MISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVA 714

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           ++ G C   R  +   V++      CK NE
Sbjct: 715 LLHGLCLEGRSQDWNNVIS------CKLNE 738


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 238/489 (48%), Gaps = 21/489 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAGK   ++  +  M   G +P++++C   I          KA+R +E ++  G  P+V 
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVV 189

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G+C  +++E A +++  +  +G SPD V+Y  ++G LC    I     V +++
Sbjct: 190 TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM 249

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMGM-------CKKGMV 210
                    +TY  LI         D+A++ L          D++G        CK+G +
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRM 309

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA + V  + +RGC PDV++Y  ++      G+  +  K++ +M   G +PN V+Y+  
Sbjct: 310 DQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAF 369

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC+ G + +A ++++A++E+  TP+A +Y  ++  + ++G+L  A + +  MI  G 
Sbjct: 370 LKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGF 429

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P  V  N +L + C+ G  D+A +  E+  ++GC  N  ++ T+        D   AL 
Sbjct: 430 FPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALS 489

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ +M      PD +TY ++I  L + G ++EA  L + M      PT ++Y  +I  + 
Sbjct: 490 LLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYG 549

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSMHAISRD 509
           +  R+ + + +L  M  +  +   T +  +IE +  +G   A    L   L +   I  +
Sbjct: 550 QIGRVEDLLNLLDKMLTR--QECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDAN 607

Query: 510 TFKRLNRTF 518
           T   L  ++
Sbjct: 608 TCHVLMESY 616



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 220/464 (47%), Gaps = 27/464 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK      + ++++  I  M   GC PD V    ++    + R+  +   VM+++EK  
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIRE---VMDVIEKME 250

Query: 103 EPDVFA----YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +  + A    YN LI   CK    + A + L   + RGF  D V Y+ ++ S C  G ++
Sbjct: 251 DTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMD 310

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ +++    C P V+TYT +I                   G  + G VGQA + ++
Sbjct: 311 QAKEIVNEMFTRGCIPDVVTYTAIIN------------------GFSQAGEVGQARKMLQ 352

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC+P+ +SY   L+ L   G   E  ++M     +   PN +TYS+++    R+G
Sbjct: 353 QMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREG 412

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K  DA DV+R    KG  P     + L+ + C+ GR+D A +F++  ++ GC  + VN+ 
Sbjct: 413 KLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFT 472

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FC+  + + AL + + +      P+  +Y T+  AL   G    A  +  +ML K
Sbjct: 473 TVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKK 532

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI+P  +TY ++I    + G V++ + LL  M + +   T  ++N +I   C    +  +
Sbjct: 533 GIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRT--AFNQVIEKLCTFGNLEAA 590

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            ++L  +     + +  T  +L+E     G    A ++A  + S
Sbjct: 591 DKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFS 634



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 180/374 (48%), Gaps = 18/374 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +  ++  + +A ++  A +VL  ++  G  P+++  N  I  L    M+E A +  +++ 
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                P V+TY  LI+      + + AM+L+ EM +                  +GC PD
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL------------------KGCSPD 222

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            +SY  ++  L    +  E   ++ +M    L  + VTY+ LI  LC+    ++A+  LR
Sbjct: 223 KVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLR 282

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
            A+++G   D   Y  ++ +YCK+GR+D A E ++ M + GC+PD+V Y  I+  F + G
Sbjct: 283 EAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAG 342

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              QA ++ +++   GC PN  SY      L   G+   A  M+     +   P+ ITY+
Sbjct: 343 EVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYS 402

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            ++    R+G + +A  ++ +M    F PT +  N+++   C+  R++E+ + +      
Sbjct: 403 VVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNM 462

Query: 469 GCKPNETTYVLLIE 482
           GC  N   +  +I 
Sbjct: 463 GCAVNAVNFTTVIH 476



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/424 (20%), Positives = 190/424 (44%), Gaps = 29/424 (6%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C +  ++E ++    A+ R       F V +  +  ++    + G+ D++   +  M   
Sbjct: 269 CKHQHADEALQFLREAQKR------GFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTR 322

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC PDVV  T +I  F Q  +  +A ++++ + K+G +P+  +Y A + G C+      A
Sbjct: 323 GCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEA 382

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +++     + ++P+ +TY++++      G +  A  V  +++     PT +   +L+Q+
Sbjct: 383 REMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQS 442

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             +C+ G V +A +F+    + GC  + +++  ++         
Sbjct: 443 ------------------LCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDI 484

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E    L+ +M      P+ VTY+ +I +L + G+ E+A ++     +KG+ P   +Y  +
Sbjct: 485 EAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTV 544

Query: 306 ISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           I  Y + GR++  +  LD M++   C      +N ++   C  GN + A ++  K+    
Sbjct: 545 IHRYGQIGRVEDLLNLLDKMLTRQECR---TAFNQVIEKLCTFGNLEAADKLLGKVLRTA 601

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              + ++ + +  +    G  + A  +   M S+ + PD      +   L ++G  +EA 
Sbjct: 602 SRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEAD 661

Query: 425 GLLV 428
            L +
Sbjct: 662 NLFL 665



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 35/271 (12%)

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + Y +++  L +    + A  VLR    +G+      +  ++ +Y + G+L  A++ L  
Sbjct: 84  IVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTM 143

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+++  NT +         ++AL   E++  +G  PNV +YN +         
Sbjct: 144 MQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHR 203

Query: 385 KIRALGMISEMLSKGIEP-----------------------------------DEITYNS 409
              A+ +ISEM  KG  P                                   D++TYN+
Sbjct: 204 VEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNT 263

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI  LC+    DEA+  L + +   F+   + Y+ I+  +CK  R++++ E++  MF +G
Sbjct: 264 LIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRG 323

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           C P+  TY  +I G    G   +A ++   +
Sbjct: 324 CIPDVVTYTAIINGFSQAGEVGQARKMLQQM 354


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 210/428 (49%), Gaps = 20/428 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVM 95
           E  F  L+    R GK +E    + +M   G   D   CT +++   ++ R  + +    
Sbjct: 181 ERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 240

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +LE    P+V  Y A I G CK   ++ A  VL+ +  RG  P+V T+  +I  LC  G
Sbjct: 241 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 300

Query: 156 MIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             E AF++F +L++ +  KP V TYT++I                   G C++G + +A 
Sbjct: 301 WTERAFRLFLKLIKSSSYKPNVHTYTVMIG------------------GYCREGKLARAE 342

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             +  +  +G +P+  +Y  L+      G ++   +LM +M   G  PN+ TY+ +I   
Sbjct: 343 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGF 402

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ GK ++A  VLR A  +GL  D  +Y  LI+ +CK G +  A++  D M+ +GC PDI
Sbjct: 403 CKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDI 462

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             Y ++++ +C+    +++ + F+K   +G  P   +Y +M +     G    AL +   
Sbjct: 463 EAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFER 522

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+  G   D ITY +LIS LC++  ++EA  L   M   R  P  ++   +   +C+  +
Sbjct: 523 MVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREK 582

Query: 455 INESIEVL 462
            + ++ VL
Sbjct: 583 TSIAVSVL 590



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 202/437 (46%), Gaps = 20/437 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFA 108
           AG+  E+   +  M ++G    V     +++   +      A +V + + + G  PD  +
Sbjct: 124 AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERS 183

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           + AL+   C+  ++E  + +L  +   GFS D  T  +++ SLC +G  +   + F ++L
Sbjct: 184 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 243

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                P V+ YT  I                   G+CK+  V QAF  +  +  RG +P+
Sbjct: 244 ETGTPPNVVNYTAWID------------------GLCKRRYVKQAFHVLEEMVGRGLKPN 285

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           V ++  L+  L  +G  E   +L  ++I S   +PNV TY+++I   CR+GK   A  +L
Sbjct: 286 VYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL 345

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               E+GL P+  +Y  LI  +CK G  D A E ++ M  +G LP+I  YN ++  FCK 
Sbjct: 346 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 405

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A ++    +  G   +  +Y  + +     G    AL +   M+  G  PD   Y
Sbjct: 406 GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAY 465

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            SLIS  C+   ++E+             PT  +Y  +I G+CK  R   ++ V   M +
Sbjct: 466 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQ 525

Query: 468 KGCKPNETTYVLLIEGI 484
            GC  +  TY  LI G+
Sbjct: 526 NGCFADSITYGALISGL 542



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 181/392 (46%), Gaps = 18/392 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             +++ F +A ++  A  ++  +RS G    V T N ++      G    A KVFD + R
Sbjct: 115 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 174

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P   ++  L+     EG+ ++   LL  M                  +C+KG    
Sbjct: 175 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 234

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +F R +   G  P+V++Y   +  L      ++   ++ EM+ RGL+PNV T++ LI 
Sbjct: 235 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 294

Query: 273 SLCRDGKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            LC+ G TE A  + L+  K     P+ ++Y  +I  YC++G+L  A   L  M+  G  
Sbjct: 295 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 354

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+   Y T++   CK G+ D+A E+  K+   G  PN+ +YN +       G    A  +
Sbjct: 355 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 414

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +    S+G++ D+ITY  LI+  C+ G +  A+ L   M      P + +Y  +I  +C+
Sbjct: 415 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 474

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            R++ ES +        G  P + TY  +I G
Sbjct: 475 QRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 506



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 36/330 (10%)

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G + +A   V  + S G    V + N +LR  L  G +    K+   M   G+ P+  ++
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             L+   CR+GK E+   +L A    G + D  +   ++ + C+ GR     EF   M+ 
Sbjct: 185 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 244

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL----WS-- 381
            G  P++VNY   +   CK     QA  + E++   G  PNV ++ T+   L    W+  
Sbjct: 245 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 304

Query: 382 ------------------------------SGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                                          G   RA  ++  M+ +G++P+  TY +LI
Sbjct: 305 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 364

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C+ G  D A  L+  M+   F P + +YN +I GFCK  +I E+ +VL     +G K
Sbjct: 365 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 424

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ TY +LI      G    A++L + +V
Sbjct: 425 FDKITYTILITEHCKQGHITYALDLFDRMV 454



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 85/197 (43%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++A+ + GRL  A + +  M S G    +   N +L    + G+   A ++F+ ++  G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+  S+  +       G       +++ M   G   D  T   ++  LC  G   +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                M  T   P V++Y   I G CK R + ++  VL  M  +G KPN  T+  LI+G+
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 485 GYGGWRAEAMELANALV 501
              GW   A  L   L+
Sbjct: 297 CKIGWTERAFRLFLKLI 313


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 214/449 (47%), Gaps = 22/449 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P    C  L+K   +        ++   +E  G  PDV+ Y+  I   CKA   + A
Sbjct: 203 GLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAA 262

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            KV + +R R  + + VTYN+MI  LC  G +E AF   ++++     P   TY  L+  
Sbjct: 263 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 322

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
                +  +A  LLDEM                 G  K+G   +AF  ++ + S G QP+
Sbjct: 323 LCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPN 382

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            I Y+ L+R L  +G+     KL+ EMI  GL P+  TY+ L+    +    + A ++L 
Sbjct: 383 KIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLN 442

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  G+ P+ YSY  +I+  C++G    A   L+ MIS+G  P+   Y  ++    K G
Sbjct: 443 EMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 502

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N   A E  EK++     P++  YN++   L + G    A    +++  +G+ PDE TY+
Sbjct: 503 NISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYS 562

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI   C+ G +++A  LL  M ++  +P   +Y  ++ G+ K+    +   +L +M   
Sbjct: 563 GLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS 622

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           G KP+   Y ++I  +     R+E ME+A
Sbjct: 623 GDKPDNHIYGIVIRNLS----RSENMEVA 647



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 236/499 (47%), Gaps = 31/499 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           +  +  E+   ++ M  +G KP++V+   L+  F +E K+ +A  ++ E++    +P+  
Sbjct: 325 KGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKI 384

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G CK  Q+  A+K+L  +   G  PD  TYN ++     +   + AF++ +++
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P V +Y I+I      G++ +A  LL+EM                 G  K+G +
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + +  +      PD+  YN L++ L  +G+ EE E+   ++  RGL P+  TYS L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ G  E A  +LR     GL P+A +Y  L+  Y K    +     L  M+  G 
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   Y  ++    ++ N + A  +  ++   G  P++  Y+++ S L    D  +A+G
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  +G+EP  + YN+LI   CR G +  A  +   + +    P  ++Y  +I G C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I ++ ++   M ++G  P+   Y +L  G       ++A +L  AL     ++ + 
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGC------SDAADLEQALF----LTEEM 794

Query: 511 FKRLNRTFPLLDVYKEISH 529
           F   NR +  + ++  + H
Sbjct: 795 F---NRGYANVSLFNTLVH 810



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 236/526 (44%), Gaps = 58/526 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    + GK  E+   ++ M++ G +P+ +M   LI+   +  +  +A ++++ + 
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD F YN L+ G  + +  + A ++L+ +R+ G  P+V +Y IMI  LC  G  +
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + ++++ +  KP    Y  LI     EG    A + L++M                
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+   G + +A ++   ++ RG  PD  +Y+ L+      G  E+ ++L+ +M++ GL+
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 262 PNVVTYS-----------------------------------ILISSLCRDGKTEDAVDV 286
           PN  TY+                                   I+I +L R    E A  V
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L   ++ GL PD + Y  LIS  CK   ++ A+  LD M  +G  P IV YN ++  FC+
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 710

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +G+  +A  +F+ +   G  PN  +Y  +      +GD   A  +  EML +GI PD   
Sbjct: 711 SGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV 770

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN L +  C D    E    L +    R    V  +N ++ GFCK  ++ E+ ++L  M 
Sbjct: 771 YNVLATG-CSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMM 829

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAM----ELANALVSMHAISR 508
           ++   PN  T   ++   G  G   EA     EL     S  A  R
Sbjct: 830 DREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDR 875



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 238/513 (46%), Gaps = 55/513 (10%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  +I    R+G  +E+  F E MV  G  PD      L+    +  +  +A  +
Sbjct: 276 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL 335

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +   G +P++  Y  L+ GF K  +   A  +L  + S G  P+ + Y+ +I  LC 
Sbjct: 336 LDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G +  A K+  ++++   +P   TY  L+Q    +   D A +LL+EM           
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM----------- 444

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   + G  P+V SY +++  L   G+ +E   L+ EMIS GL+PN   Y+ LI  
Sbjct: 445 -------RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 497

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++G    A + L    +  + PD + Y+ LI      GR++ A E+   +   G +PD
Sbjct: 498 HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPD 557

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY----------------NTMFS 377
              Y+ ++  +CK GN ++A ++  ++ + G  PN  +Y                +++  
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617

Query: 378 ALWSSGDK---------IRALG----------MISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++  SGDK         IR L           +++E+   G+ PD   Y+SLIS LC+  
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +++AVGLL +M      P ++ YN +I GFC++  I+ +  V  ++  KG  PN  TY 
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            LI+G    G   +A +L   ++    I+ D F
Sbjct: 738 ALIDGNCKNGDITDAFDLYKEMLD-RGIAPDAF 769



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 196/415 (47%), Gaps = 19/415 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P   +   L+  + +      A +V+ ++   G  P     N L+    +A+ +EL  K+
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
              +   G  PDV TY+  I + C     ++A KVF+++ R +C    +TY ++I     
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS---- 286

Query: 189 EGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+C+ G V +AF F   +   G  PD  +Y  L+  L    + +E 
Sbjct: 287 --------------GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEA 332

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           + L+ EM   GL+PN+V Y  L+    ++GKT +A D+L+     G+ P+   YD LI  
Sbjct: 333 KALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRG 392

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            CK G+L  A + L  MI  G  PD   YN ++    +  + D A E+  ++ + G  PN
Sbjct: 393 LCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPN 452

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V SY  M + L  +G+   A  ++ EM+S+G++P+   Y  LI    ++G +  A   L 
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            M      P +  YN +I G     R+ E+ E  A + ++G  P+E TY  LI G
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           T+  SR   P+     +L+ +  + G   +A  V+    + GL P     + L+    + 
Sbjct: 162 TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA 221

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
             ++L  +   +M   G LPD+  Y+T + A CK  + D A ++FE++    C  N  +Y
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N M S L  SG    A G   EM+  G+ PD  TY +L++ LC+   + EA  LL +M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           +  +P ++ Y  ++ GF K  +  E+ ++L  M   G +PN+  Y  LI G+   G    
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR 401

Query: 493 AMELANALVSMHAISRDTF 511
           A +L   ++ +  +  DTF
Sbjct: 402 ASKLLKEMIKV-GLRPDTF 419



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 169/439 (38%), Gaps = 102/439 (23%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+   +E M++ G KP+  M   LI    +E   + A   +E + K    PD+F Y
Sbjct: 467 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCY 526

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+LI G     ++E A +   +++ RG  PD  TY+ +I   C  G +E A ++  Q+L 
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
              KP   TYT L++        +K   +L  M                           
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646

Query: 203 -------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
                                    G+CK   + +A   +  +   G +P ++ YN L+ 
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                G       +   ++++GL PN VTY+ LI   C++G   DA D+ +   ++G+ P
Sbjct: 707 GFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAP 766

Query: 298 DAYSYD----------------------------------PLISAYCKDGRLDLAIEFLD 323
           DA+ Y+                                   L+  +CK G+L    + L 
Sbjct: 767 DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLH 826

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+    +P+      +++ F K G   +A  +F +L                 A  S+ 
Sbjct: 827 VMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK-------------KASQSAT 873

Query: 384 DKIRALGMISEMLSKGIEP 402
           D+   L   ++M++KG+ P
Sbjct: 874 DRFSLL--FTDMINKGLIP 890


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 228/477 (47%), Gaps = 32/477 (6%)

Query: 49  RAGKFDESL-YFIESMVANGC-KPDVV-MCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           RAG  D +L  F  ++   GC +P    +   LI    +E        V   + K G +P
Sbjct: 108 RAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQP 167

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +VF YN L+   C+ +++  A K+LD + ++G  PD VTY  ++ +LC+ G ++ A +V 
Sbjct: 168 NVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL 227

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
                    P   +Y  +I A   E +  +   ++ +M                   CK 
Sbjct: 228 SA-----APPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKA 282

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +  A   +  +   GC P+V ++  L+  L N G+  +   +   M++ G  P+ V+Y
Sbjct: 283 GELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSY 342

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI  LC  G  + A  VL   ++ G  P+A +Y  LI  + K G LD AI   + M  
Sbjct: 343 NVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTR 402

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC P++V Y  ++  FCK    +QA  + +K+    CPPN  ++NT+  +L +     R
Sbjct: 403 SGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGR 462

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           ALG+  EM   G  P+  TYN L+  L R+G   +A+ ++++M++     ++++YN ++ 
Sbjct: 463 ALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVS 522

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG------IGYGGWRAEAMELAN 498
           G C+ R   E++  +  M  +G +P+  T+  +I        +    W   AM + N
Sbjct: 523 GLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVN 579



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 19/379 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  ++    +AG+   +   +  MV  GC P+V   T L+   F + + + A+ + + + 
Sbjct: 272 YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMV 331

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P   +YN LI G C    ++ A+ VL+ +   G  P+  TY+ +I      G ++
Sbjct: 332 AEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLD 391

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +++ + R  CKP V+ YT ++                     CKK M  QA   + 
Sbjct: 392 GAISIWNDMTRSGCKPNVVVYTNMVGV------------------FCKKLMFNQAESLID 433

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +    C P+ +++N L+R+L N  +      +  EM   G  PN  TY+ L+  L R+G
Sbjct: 434 KMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREG 493

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
              DA+ ++   +  G+     +Y+ ++S  C+      A+ F+  MI  G  PD   + 
Sbjct: 494 NCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFT 553

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+ A+CK G    A  I   ++ V C  N+  Y  + + L +      A+  + +ML +
Sbjct: 554 AIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYE 613

Query: 399 GIEPDEITYNSLISCLCRD 417
           GI P+ +T+N L+  + R+
Sbjct: 614 GIYPNTVTWNVLVRGVFRN 632



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 53/342 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+   F  G+  ++L   + MVA G  P  V    LI+          A  V+  +E
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++G  P+   Y+ LI GF KA  ++ A  + + +   G  P+VV Y  M+G  C + M  
Sbjct: 367 QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFN 426

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + D++L +NC P  +T+  LI++     +  +A+ +  EM                
Sbjct: 427 QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELL 486

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ ++G  G A Q V  +++ G +  +++YN ++  L  M    E    +  MI RG++
Sbjct: 487 HGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQ 546

Query: 262 P-----------------------------------NVVTYSILISSLCRDGKTEDAVDV 286
           P                                   N++ Y+IL++ LC   K EDA+  
Sbjct: 547 PDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVY 606

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           L     +G+ P+  +++ L+    ++   +   +F+ ++  D
Sbjct: 607 LLKMLYEGIYPNTVTWNVLVRGVFRNLGCNNPSDFIQHIAMD 648



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 8/275 (2%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RA 289
           ++   +R L   G  +  +  + EM  RG+          + +  R G  + A+    RA
Sbjct: 63  AHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 122

Query: 290 AKEKGLT-PDAYS-YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
             + G   P A   Y+ LI A  ++  +         M  DG  P++  YN ++ A C+N
Sbjct: 123 VHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQN 182

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
                A ++ ++++  GCPP+  +Y T+ SAL + G    A    +E+LS    P   +Y
Sbjct: 183 HRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA----TEVLSAA-PPVAASY 237

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N++I  LCR+  + E   ++ DM     +P VI+Y  I+  FCK   +  +  +LA M  
Sbjct: 238 NAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVI 297

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            GC PN  T+  L+ G+   G   +A+++   +V+
Sbjct: 298 TGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVA 332



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 60/127 (47%)

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI  L R+ MV     +  +M     +P V +YN+++   C+  R+  + ++L  M 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKE 526
            KGC P++ TY  ++  +   G   EA E+ +A   + A        L R F + +V+  
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAV 256

Query: 527 ISHLATK 533
           +  +  +
Sbjct: 257 VGDMVGR 263


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 226/463 (48%), Gaps = 18/463 (3%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    +   +   ++  + M  +G + + +    LI  +   R+ N A  V   +
Sbjct: 51  KFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKI 110

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G +PD+  Y  LI G C   Q++ +    DRL S+G   D V+Y  +I  LC  G  
Sbjct: 111 LKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQT 170

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
             A ++  ++  + C+P V+ Y  +I     +     A  L  EM               
Sbjct: 171 GPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSL 230

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G C  G + +AF  +  +  +   P+V ++N L+  L   GK  E + L+  M+  G+
Sbjct: 231 IYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGV 290

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+V TY+ L+       +   A +V     + G+T D +SY  +IS   K   LD A++
Sbjct: 291 GPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMD 350

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
             + M ++  +PD+V Y++++   CK+G  + AL+  +++ D G PPNV +Y ++  AL 
Sbjct: 351 LFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALC 410

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            S    +A+ ++ ++  +GI+ +  TYN L+  LC+DG + +A  +  D+        V+
Sbjct: 411 KSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV 470

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +Y+I+I G CK    +E++ +L+ M +KGC P+   Y  +I  
Sbjct: 471 TYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINA 513



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 213/419 (50%), Gaps = 18/419 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G +PD++  T LI+      +  +++   + L   G + D  +Y  LI+G CK  Q   A
Sbjct: 114 GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA 173

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            ++L ++      PDVV YN +I  LC   ++  AF ++ ++      P V+TYT LI  
Sbjct: 174 LRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYG 233

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             + GQ DKA  LL+EM                 G+CK+G + +A   V  +   G  PD
Sbjct: 234 FCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V +YN L+     + +  + + +   M   G+  +V +YS++IS L +    ++A+D+  
Sbjct: 294 VFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFE 353

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             + + + PD  +Y  LI   CK GR++ A++++D M   G  P+++ Y +++ A CK+ 
Sbjct: 354 GMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSH 413

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A+ + +K+ D G   N+ +YN +   L   G    A  +  ++L KG   D +TY+
Sbjct: 414 QVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYS 473

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +I+ LC++ + DEA+ LL  ME     P  I+Y  II  F +    +++ ++L  M +
Sbjct: 474 IMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 1/268 (0%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F R L  R   P +I +  +L +L+    +     L   M   G++ N +T +ILI+S C
Sbjct: 37  FNRMLRMRP-PPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYC 95

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              +   A  V     + G  PD  +Y  LI   C +G++  ++ F D ++S G   D V
Sbjct: 96  HLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHV 155

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y T++   CK G    AL +  K+    C P+V  YNT+   L        A  +  EM
Sbjct: 156 SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM 215

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             K + P+ +TY SLI   C  G +D+A GLL +M      P V ++N ++ G CK  ++
Sbjct: 216 FEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKM 275

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            E+  ++A M ++G  P+  TY  L++G
Sbjct: 276 REAKSLVAVMMKEGVGPDVFTYNALMDG 303



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 150/292 (51%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              + +E  G Q + I+ N+L+ +  ++ +      +  +++  G +P+++TY+ LI  L
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C +G+ +++++       +G+  D  SY  LI+  CK G+   A+  L  +  + C PD+
Sbjct: 130 CLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDV 189

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YNTI+   CK+     A +++ ++ +    PNV +Y ++       G   +A G+++E
Sbjct: 190 VMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNE 249

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ K + P+  T+N+L+  LC++G + EA  L+  M      P V +YN ++ G+   + 
Sbjct: 250 MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKE 309

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             ++  V   M + G   +  +Y ++I G+       EAM+L   + + + I
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVI 361



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 102/220 (46%)

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA+D           P    +  ++ +  K     + I     M   G   + +  N ++
Sbjct: 32  DAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILI 91

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
            ++C     + A  +F K+  +G  P++ +Y T+   L  +G    +L     ++S+GI+
Sbjct: 92  NSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIK 151

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            D ++Y +LI+ LC+ G    A+ LL  +E    RP V+ YN II G CK + + ++ ++
Sbjct: 152 LDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDL 211

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              MFEK   PN  TY  LI G    G   +A  L N +V
Sbjct: 212 YCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV 251



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 1/167 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++G+ + +L +++ M   G  P+V+  T LI    +  + +KA+ +++ ++
Sbjct: 367 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK 426

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G + +++ YN L+ G CK  ++  A KV   L  +G + DVVTY+IMI  LC   + +
Sbjct: 427 DQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFD 486

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
            A  +  ++    C P  I Y  +I A   +   DKA KLL EM  C
Sbjct: 487 EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDC 533



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 67/148 (45%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N + A++ F ++  +  PP +  +  +  +L  +      + +   M   GI+ + IT N
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C    ++ A  +   +    ++P +I+Y  +I G C   ++ ES+     +  +
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G K +  +Y  LI G+   G    A+ L
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRL 176



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%)

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           +T F +L +  D I +    + ML     P  I +  ++  L +       + L   ME 
Sbjct: 21  HTHFHSLPNLNDAIDSF---NRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMEL 77

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
              +   I+ NI+I  +C  R+IN +  V A + + G +P+  TY  LI G+   G   E
Sbjct: 78  HGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKE 137

Query: 493 AMELANALVS 502
           ++   + LVS
Sbjct: 138 SLNFHDRLVS 147


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 221/488 (45%), Gaps = 56/488 (11%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAV---RVMEILEKYGEPDVFAYNALISGFCKA 119
           +VA G +PD     K+++        + A+   R M   E    PD F+YN +I+G  ++
Sbjct: 148 LVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRS 207

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            +   A KV D +   G +P+ +TYN MI      G +E+ F++ DQ+L D  KP V+TY
Sbjct: 208 GKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTY 267

Query: 180 TILIQATMLEGQTDKAMKLLDEM------------------------------------- 202
            +L+      G+ D+   L+DEM                                     
Sbjct: 268 NVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLK 327

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK G V +A Q    L   G  P  + YN L+     +     
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              +  +M SR + P+ +TY+ LI+ LC+      A D++   ++ G+ P   +++ LI 
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 447

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           AY   G+L+     L  M   G   D++++ +++ AFCKNG   +A+ I + +      P
Sbjct: 448 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 507

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N   YN++  A   SGD  +AL ++ +M + G+    +TYN L+  LCR   +DEA  L+
Sbjct: 508 NAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             + +   RP V+SYN II   C     ++++E+L  M + G +P   T   L+  +   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627

Query: 488 GWRAEAME 495
           G R   ME
Sbjct: 628 G-RVHDME 634



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 235/486 (48%), Gaps = 25/486 (5%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R    +E  P     S++V       +I   +R+GK  ++L   + MV  G  P+ +  
Sbjct: 180 LRRMGRSEGAPPPDAFSYNV-------VIAGLWRSGKGSDALKVFDEMVDMGVAPNRITY 232

Query: 76  TKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
             +I    +        R+  ++L    +P+V  YN L+SG C+  +++    ++D + S
Sbjct: 233 NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMAS 292

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               PD  TY+I+   L   G  ++   +F + L+        T +IL+     +G+  K
Sbjct: 293 HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A ++ + +                 G C+   +  AF     ++SR  +PD I+YN L+ 
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L  +    + E L+ EM   G++P+V T++ LI +    G+ E    VL   ++KG+  
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  S+  ++ A+CK+G++  A+  LD MI     P+   YN+I+ A+ ++G+ +QAL + 
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           EK+ + G   ++ +YN +   L  S     A  +I  + ++G+ PD ++YN++IS  C  
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D+A+ LL +M     RPT+ + + ++       R+++   +   M  K  +P+ + Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652

Query: 478 VLLIEG 483
            ++++ 
Sbjct: 653 GIMVDA 658



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 206/430 (47%), Gaps = 21/430 (4%)

Query: 70  PDVVMCTKLIKKF-FQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           P +  C  L++   F  R ++       ++     PD FA+N ++     A  +++A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 129 LDRL-RSRGFSP-DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           L R+ RS G  P D  +YN++I  L   G    A KVFD+++     P  ITY  +I   
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
           +  G  +   +L D+M                     G +P+V++YN+LL  L   G+ +
Sbjct: 240 VKGGDLEAGFRLRDQM------------------LHDGPKPNVVTYNVLLSGLCRTGRMD 281

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E   LM EM S  + P+  TYSIL   L R G+++  + +   + +KG+   AY+   L+
Sbjct: 282 ETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILL 341

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +  CKDG++  A +  + ++  G +P  V YNT++  +C+  +   A  IFE++      
Sbjct: 342 NGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR 401

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+  +YN + + L       +A  ++ EM   G++P   T+N+LI      G +++   +
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTV 461

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           L DM+    +  VIS+  ++  FCK  +I E++ +L  M  K   PN   Y  +I+    
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 521

Query: 487 GGWRAEAMEL 496
            G   +A+ L
Sbjct: 522 SGDTEQALLL 531



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 204/428 (47%), Gaps = 19/428 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ DE+   ++ M ++   PD    + L     +  +S   + +  E L+K      +
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L++G CK  ++  A +V + L   G  P  V YN +I   C    +  AF +F+Q+
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              + +P  ITY  LI                   G+CK  MV +A   V  +E  G  P
Sbjct: 396 KSRHIRPDHITYNALIN------------------GLCKLEMVTKAEDLVMEMEKSGVDP 437

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V ++N L+      G+ E+   ++++M  +G++ +V+++  ++ + C++GK  +AV +L
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                K + P+A  Y+ +I AY + G  + A+  ++ M + G    IV YN +L   C++
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D+A E+   L + G  P+V SYNT+ SA  + GD  +AL ++ EM   GI P   T 
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           ++L+S L   G V +   L   M      P+   Y I++  + +    ++   +   M E
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSE 677

Query: 468 KGCKPNET 475
           KG   ++T
Sbjct: 678 KGIAFDDT 685



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 175/382 (45%), Gaps = 19/382 (4%)

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P + + N+++ SL   G        F  L+    +P    +  ++QA +  G  D A+ +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 199 LDEMG-------------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           L  MG                   + + G    A +    +   G  P+ I+YN ++   
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           +  G  E G +L  +M+  G +PNVVTY++L+S LCR G+ ++   ++       + PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           ++Y  L     + G     +      +  G +      + +L   CK+G   +A ++FE 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           L   G  P    YNT+ +      D   A  +  +M S+ I PD ITYN+LI+ LC+  M
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           V +A  L+++ME +   P+V ++N +I  +    ++ +   VL+ M +KG K +  ++  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 480 LIEGIGYGGWRAEAMELANALV 501
           +++     G   EA+ + + ++
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMI 501



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 19/260 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI     AG+ ++    +  M   G K DV+    ++K F +  K  +AV ++ +++
Sbjct: 442 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+   YN++I  + ++   E A  +++++++ G S  +VTYN+++  LC    I+
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   L     +P V++Y  +I A   +G TDKA++LL EM                
Sbjct: 562 EAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM---------------- 605

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G +P + + + L+  L + G+  + E L  +M+ + +EP+   Y I++ +  R  
Sbjct: 606 --NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663

Query: 279 KTEDAVDVLRAAKEKGLTPD 298
                  + +   EKG+  D
Sbjct: 664 NDSKVASLKKEMSEKGIAFD 683


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 235/470 (50%), Gaps = 34/470 (7%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           + ETRP        V  T  M+ +    R G   +++  +  M A+G +PDVV    LI+
Sbjct: 106 AHETRPTA------VSYTTLMRALCAERRTG---QAVGLLRDMQASGVRPDVVTYGTLIR 156

Query: 81  KFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
                   +KAV ++ E+ E   EP+V  Y+ L+ G+CKA + E  +KV + +  RG  P
Sbjct: 157 GLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEP 216

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DVV Y  +I SLC  G ++ A +V D+++    +P V+TY +LI +   EG   +AM L 
Sbjct: 217 DVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLR 276

Query: 200 DEMGMCKKGMVGQAFQF----------VRSLESRG-----------CQPDVISYNMLLRT 238
           + M   +KG+   A  +          +   E+ G            +P+V+++N ++  
Sbjct: 277 NNM--LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHG 334

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L   G+  +  ++   M   G   N+VT+++LI  L R  K + A++++      GL PD
Sbjct: 335 LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           +++Y  LI+ +CK  ++D A   L  M  DG  P++V+Y  +LAA C+ G  +QA   F+
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFD 454

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++    C  +V +Y+TM        D+  A   +  ML +G+ PD +TY+ LI+     G
Sbjct: 455 EMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSG 513

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +  A  +L  M ++ F P V  ++ +I G+       + +E++  M  K
Sbjct: 514 DLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 196/398 (49%), Gaps = 20/398 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D  +YN +++  C+      A   L R+ +    P  V+Y  ++ +LC+      A  + 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
             +     +P V+TY  LI+        DKA++LL EM                 G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G      +    +  RG +PDV+ Y  L+ +L   GK ++  ++M +M+ RGLEPNVVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI+S+C++G  ++A+ +     EKG+  DA +Y+ LI+       +D A+  L+ MI 
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 328 DGCL--PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              +  P++V +N+++   CK G   QA ++ + +++ GC  N+ ++N +   L      
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A+ ++ EM S G+EPD  TY+ LI+  C+   VD A  LL  M      P ++ Y  +
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   C+   + ++      M  K CK +   Y  +I G
Sbjct: 437 LAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHG 473



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 194/373 (52%), Gaps = 19/373 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D V+YN ++ +LC +G    A     +++    +PT ++YT L++A   E +T +A+ LL
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
            +M                 G+C    V +A + +R +   G +P+V+ Y+ LL+     
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+WE   K+  EM  RG+EP+VV Y+ LI SLCR+GK + A  V+    E+GL P+  +Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-- 360
           + LI++ CK+G +  A+   + M+  G   D V YNT++         D+A+ + E++  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            +    PNV ++N++   L  +G   +A  +   M   G   + +T+N LI  L R   V
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            +A+ L+ +M S+   P   +Y+I+I GFCK  +++ +  +L+ M   G +P    Y+ L
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 481 IEGIGYGGWRAEA 493
           +  +   G   +A
Sbjct: 437 LAALCEQGMMEQA 449



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +C++G    A  F+  + +   +P  +SY  L+R L    +  +   L+ +M + G+ P
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRP 146

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +VVTY  LI  LC     + AV++LR   E G+ P+   Y  L+  YCK GR +   +  
Sbjct: 147 DVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF 206

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   G  PD+V Y  ++ + C+ G   +A ++ +K+ + G  PNV +YN + +++   
Sbjct: 207 EEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKE 266

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVI 440
           G    A+ + + ML KG+  D +TYN+LI+ L     +DEA+GLL +M    T   P V+
Sbjct: 267 GSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVV 326

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++N +I G CKT R+ ++ +V   M E GC  N  T+ LLI G+       +AMEL + +
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386

Query: 501 VSMHAISRDTF 511
            S   +  D+F
Sbjct: 387 AS-SGLEPDSF 396



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 161/403 (39%), Gaps = 91/403 (22%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           L++   +AG+++      E M   G +PDVVM T LI    +E K  KA +VM+ ++E+ 
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS----------------------- 138
            EP+V  YN LI+  CK   ++ A  + + +  +G +                       
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308

Query: 139 --------------PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
                         P+VVT+N +I  LC  G +  AF+V D +  + C   ++T+ +LI 
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368

Query: 185 ATMLEGQTDKAMKLLDEMG----------------------------------------- 203
             +   +  KAM+L+DEM                                          
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428

Query: 204 -----------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +C++GM+ QA  F   +  + C+ DV++Y+ ++     +   +  E+ +
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFL 487

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M+  GL P+ VTYS+LI+     G    A  VL+     G  PD   +D LI  Y   
Sbjct: 488 KHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAK 547

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           G  +  +E +  M +     D    +TI      N      L+
Sbjct: 548 GDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQ 590



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 6/219 (2%)

Query: 298 DAYSYDPLISAYCKDGR-LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           DA SY+ +++A C+ G  LD A+ FL  +++    P  V+Y T++ A C      QA+ +
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAAL-FLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
              +   G  P+V +Y T+   L  + D  +A+ ++ EM   GIEP+ + Y+ L+   C+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G  +    +  +M      P V+ Y  +I   C+  ++ ++ +V+  M E+G +PN  T
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 477 YVLLIEGIGYGGWRAEAMELANAL----VSMHAISRDTF 511
           Y +LI  +   G   EAM L N +    V++ A++ +T 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCP---------PNVS---SYNTMFSALWSSGDKIRA 388
           LA   + G A+ +  +   L  V  P         P+V    SYNT+ +AL   G  + A
Sbjct: 38  LAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDA 97

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
              +  +++    P  ++Y +L+  LC +    +AVGLL DM+++  RP V++Y  +I G
Sbjct: 98  ALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRG 157

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG-W 489
            C    +++++E+L  M E G +PN   Y  L++G    G W
Sbjct: 158 LCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 201/415 (48%), Gaps = 17/415 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P  F +N ++S   K  +   A  +   L  +G + D+VT NI+I   C  G I  +F V
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +L+    P VIT T LI+   L G+  KA+K  D++                 G+CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G    A Q +R+LE R  +PDV+ YN+++ +L       E   L +EM ++ + PNVVT
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C  G   +AV +L   K K + PD Y++  LI A  K+G++  A   L  M+
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                PD+V YN+++  +        A  +F  ++  G  P V SY  M   L  +    
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ +  EM  K + P+ IT+NSLI  LC+ G +     L+  M        VI+Y+ +I
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              CK   ++++I +   M  +  +P+  TY +LI+G+  GG    A E+   L+
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLL 481



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 213/437 (48%), Gaps = 18/437 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           G+   S   + +++  G  PDV+  T LIK      +  KA++  + ++    + D  +Y
Sbjct: 118 GQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISY 177

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+G CK  + + A +++  L  R   PDVV YNI+I SLC   ++  A  ++ ++  
Sbjct: 178 GTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNA 237

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+TYT LI    + G   +A+ LL+EM                  + K+G +  
Sbjct: 238 KQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKA 297

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +     +PDV++YN L+     + + +  + +   M   G+ P V +Y+I+I 
Sbjct: 298 AKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMID 357

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+    ++A+ +    K K + P+  +++ LI   CK GR+    + +D M     L 
Sbjct: 358 GLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLA 417

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D++ Y++++ A CKN + DQA+ +F+K+      P++ +Y  +   L   G    A  + 
Sbjct: 418 DVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVF 477

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             +L KG   D  TY  +IS  C+ G+ DEA+ LL  ME     P  I+++III    + 
Sbjct: 478 QHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEK 537

Query: 453 RRINESIEVLAAMFEKG 469
              +++ ++L  M  +G
Sbjct: 538 DENDKAEKLLREMIARG 554



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 18/388 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F +    +  LI    + G+   ++  + ++     KPDVVM   +I    + +   +
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E+  K   P+V  Y  LI GFC    +  A  +L+ ++ +  +PDV T++I+I 
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           +L   G +++A  V   +++   KP V+TY  L+    L  +   A  + + M       
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G+CK  MV +A      ++ +   P+ I++N L+  L   G+      L+
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            +M  R    +V+TYS LI +LC++   + A+ + +    + + PD Y+Y  LI   CK 
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GRL +A E   +++  G   DI  Y  +++ FCK G  D+AL +  K+ D GC PN  ++
Sbjct: 468 GRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
           + +  AL+   +  +A  ++ EM+++G+
Sbjct: 528 DIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 18/299 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVFAY 109
           G   E++  +  M      PDV   + LI    +E K   A  V+ ++ K Y +PDV  Y
Sbjct: 258 GCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTY 317

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+L+ G+   N+++ A  V + +   G +P V +Y IMI  LC   M++ A  +F+++  
Sbjct: 318 NSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKH 377

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
            N  P  IT+  LI      G+      L+D+M                  +CK   + Q
Sbjct: 378 KNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQ 437

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    + + ++  QPD+ +Y +L+  L   G+ +  +++   ++ +G   ++ TY+++IS
Sbjct: 438 AIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMIS 497

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             C+ G  ++A+ +L   ++ G  P+A ++D +I A  +    D A + L  MI+ G L
Sbjct: 498 GFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
           N     +   L   M+     P    ++ ++SSL +  +   A+ + +    KG+T D  
Sbjct: 46  NHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLV 105

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           + + LI+ +C  G++ L+   L  ++  G  PD++   T++   C  G   +AL+  + +
Sbjct: 106 TLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDV 165

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
             +    +  SY T+ + L   G+   A+ ++  +  + I+PD + YN +I  LC++ +V
Sbjct: 166 VALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLV 225

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  L  +M + +  P V++Y  +I GFC    + E++ +L  M  K   P+  T+ +L
Sbjct: 226 GEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSIL 285

Query: 481 IEGIGY-GGWRAEAMELA 497
           I+ +G  G  +A  + LA
Sbjct: 286 IDALGKEGKMKAAKIVLA 303



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 69/154 (44%)

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           + + + A+ +F ++  +  PP    +N + S+L        A+ +   +  KGI  D +T
Sbjct: 47  HNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVT 106

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            N LI+C C  G +  +  +L  +    + P VI+   +I G C    + ++++    + 
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               + +  +Y  LI G+   G    A++L   L
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL 200



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 59/123 (47%)

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           +  D   A+ + + ML     P    +N+++S L +      A+ L   ++       ++
Sbjct: 46  NHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLV 105

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + NI+I  FC   +I  S  VLA + ++G  P+  T   LI+G+   G   +A++  + +
Sbjct: 106 TLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDV 165

Query: 501 VSM 503
           V++
Sbjct: 166 VAL 168


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 224/488 (45%), Gaps = 23/488 (4%)

Query: 43  LIKRSFR-AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           L+ R+ R   ++D+       M+  G +P +V    L+  FF+E + ++A +++  +E  
Sbjct: 201 LVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEAR 260

Query: 102 GE---PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P    YN +I+G  +  ++E A +++DR+R         T+N +I    +RG +E
Sbjct: 261 PGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVE 319

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD---------KAMKLLDEM------- 202
            A  +  ++  +   PTV+TY  +I      G  +         +AM LL ++       
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLI 379

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G + +A      L+  G  P V++YN+LL     +G  EE  +   EM+ +G +
Sbjct: 380 NGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQ 439

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+V TY+IL++   +        +       KGL PD ++Y+  ISA    G    A + 
Sbjct: 440 PDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQL 499

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            + MIS G   D V YN  L   CK+GN   A  ++ K+   G  P+  +Y  +  A   
Sbjct: 500 TEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCE 559

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +   ML  G+ P  +TY   I   CR G +  A G    M     RP  ++
Sbjct: 560 RGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVT 619

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YN++I   C+  R N + +    M E+G  PN+ TY LLI+G    G   EA+ L + + 
Sbjct: 620 YNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM- 678

Query: 502 SMHAISRD 509
             H I  D
Sbjct: 679 HQHGIHPD 686



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 219/470 (46%), Gaps = 25/470 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           +  L+   FR G+ D++   +  M A   GC P  V    +I    ++ +  KA ++++ 
Sbjct: 234 YNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +    +   F +N LI+G+     +E A  +   + + G  P VVTYN +I  +   G +
Sbjct: 294 MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E+A   F ++      P +ITY  LI      G   +A+ L  ++               
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL---RTLLNMGKWEEGEKLMTEMIS 257
             G C+ G + +A +F + +  +GCQPDV +Y +L+   R + N+    E      EM+S
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE---FFDEMLS 470

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +GL+P+   Y+  IS+    G T +A  +      +G++ D  +Y+  +   CK G L  
Sbjct: 471 KGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKD 530

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A      M+SDG  PD + Y  ++ A C+ G   +A +IF+ +   G PP+  +Y     
Sbjct: 531 AYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIH 590

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           A    G+   A G   +ML +G+ P+E+TYN LI  LCR G  + A     +M      P
Sbjct: 591 AYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSP 650

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
              +Y ++I G CK     E+I + + M + G  P+  T+  L +G   G
Sbjct: 651 NKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEG 700



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 178/405 (43%), Gaps = 53/405 (13%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           +   G  P +   N+++ +L      +    V+ ++L+   +P+++TY  L+ +   EG+
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 192 TDKAMKLLDEM-------------------GMCKKGMVGQAFQFVR-------------- 218
            D+A KLL EM                   G+ +KG + +A Q V               
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN 306

Query: 219 --------------------SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                                +E+ G  P V++YN ++  +   G  E       EM + 
Sbjct: 307 PLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM 366

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL P+++TY+ LI+  C+ G  ++A+ +    K  GL P   +Y+ L+  YC+ G L+ A
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
             F   M+  GC PD+  Y  ++    K  N     E F+++   G  P+  +YNT  SA
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
               G    A  +   M+S+GI  D +TYN  +  LC+ G + +A  L + M S   +P 
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            I+Y  +I   C+  R+ E+ ++   M   G  P+  TY + I  
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 149/269 (55%), Gaps = 5/269 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +   G  P +   N++LR L +  +W++   +  EM+  G+EP++VTY+ L+ S  R+
Sbjct: 185 REMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFRE 244

Query: 278 GKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDGCLPDI 334
           G+ + A  +LR   A+  G  P   +Y+ +I+   + G L+ A + +D M +S       
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA--SA 302

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +N ++  +   G+ ++A  +  ++ + G  P V +YNT+   ++ SG+   A     E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M + G+ PD ITYNSLI+  C+ G + EA+ L  D++     P+V++YNI++ G+C+   
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + E+      M E+GC+P+ +TY +L+ G
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNG 451



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L    EM   G+ P     N ++  L  +   D+   +  +M      P++++YN ++  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 449 FCKTRRINESIEVLAAMFEK--GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           F +  R++++ ++L  M  +  GC P++ TY ++I G+   G   +A +L + +      
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 507 SRDTFKRL 514
           S  TF  L
Sbjct: 301 SAFTFNPL 308


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 224/470 (47%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+      M   GC PDVV    LI  + +  + ++  +++E + + G + DV 
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ FCK  ++E A      ++  G   +VVT++  + + C  G++  A K+F Q+
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                     TYT LI  T   G+ D A+ LLDEM                 G+CK+  V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +R +E  G + + + Y  L+         E+   L++EM ++GLE ++  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC   K ++A  +L    E GL P+   Y  ++ A  K G++  AI  L  ++  G 
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+++ Y  ++   CK G+ D+A+  F K+ D+G  PNV +Y  +   L  +G    A+ 
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +EM+ KG+  D++ Y +L+    + G + +A  L   M  +  +  +  Y   I GFC
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               + E+ EV + M   G  P+   Y  LI      G   EA+ L + +
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 220/468 (47%), Gaps = 20/468 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G  D+++  +  +      P+   C  ++ +  ++R S + VR   + E+   P+VF +N
Sbjct: 136 GLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDR-SGRLVR--RLFEQLPAPNVFTFN 192

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK  ++  A  +  R++  G  PDVVT+N +I      G ++   ++ +++ R 
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            CK  V+TY  LI      G+ + A      M                   CK+G+V +A
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  RG   +  +Y  L+      G+ ++   L+ EM+ +G+  NVVTY++L+  
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++ K  +A DVLR  ++ G+  +   Y  LI  +  +   + A+  L  M + G   D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  Y  ++   C     D+A  +  K+ + G  PN   Y TM  A + SG    A+ M+ 
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++L  G +P+ ITY +LI  LC+ G +DEA+     M      P V +Y  ++ G CK  
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +NE++++   M  KG   ++  Y  L++G    G   +A  L   ++
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 200/423 (47%), Gaps = 18/423 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV  +N+LI G+ K  +++   ++++ +R  G   DVVTYN +I   C  G +E+A+  
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  + R+     V+T++  + A   EG   +AMKL  +M                 G CK
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A   +  +  +G   +V++Y +L+  L    K  E E ++  M   G+  N + 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI     +  +E A+ +L   K KGL  D   Y  LI   C   +LD A   L  M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P+ + Y T++ A  K+G   +A+ + +K+ D G  PNV +Y  +   L  +G   
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+   ++M   G++P+   Y +L+  LC++G ++EAV L  +M         + Y  ++
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G+ K   ++++  + A M + G + +   Y   I G        EA E+ + ++  H I
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG-HGI 639

Query: 507 SRD 509
           + D
Sbjct: 640 APD 642



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 195/445 (43%), Gaps = 53/445 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G+ DE    +E M  +GCK DVV    LI  F +  +   A      ++
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMK 285

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G   +V  ++  +  FCK   +  A K+  ++R RG + +  TY  +I   C  G ++
Sbjct: 286 REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLD 345

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQA------------------------------TML 188
            A  + D+++R      V+TYT+L+                                T++
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 189 EGQ-----TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
            G      ++KA+ LL EM                 G+C    + +A   +  ++  G +
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+ I Y  ++      GK  E   ++ +++  G +PNV+TY  LI  LC+ G  ++A+  
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               ++ GL P+  +Y  L+   CK+G L+ A++  + M+  G   D V Y  +L  + K
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN   A  +  K+ D G   ++  Y    S   +      A  + SEM+  GI PD   
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645

Query: 407 YNSLISCLCRDGMVDEAVGLLVDME 431
           YN LIS   + G ++EA+ L  +ME
Sbjct: 646 YNCLISKYQKLGNLEEAISLQDEME 670



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 19/362 (5%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  LI  + +AG+ D+++  ++ MV  G   +VV  T L+    +ERK  +A  V
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + ++EK G   +   Y  LI G       E A  +L  ++++G   D+  Y  +I  LC+
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
              ++ A  +  ++     +P  I YT ++ A                    K G V +A
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF------------------KSGKVPEA 487

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              ++ +   G QP+VI+Y  L+  L   G  +E      +M   GL+PNV  Y+ L+  
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++G   +AV +      KG++ D   Y  L+  Y K G L  A      MI  G   D
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y   ++ FC      +A E+F ++   G  P+ + YN + S     G+   A+ +  
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQD 667

Query: 394 EM 395
           EM
Sbjct: 668 EM 669



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCP------------------------------- 366
           +T+L+     G  D A+    ++ ++  P                               
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV ++N +   L   G+   A  + S M   G  PD +T+NSLI    + G +DE   L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           + +M  +  +  V++YN +I  FCK  R+  +    AAM  +G   N  T+   ++    
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 487 GGWRAEAMEL 496
            G   EAM+L
Sbjct: 306 EGLVREAMKL 315


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 226/461 (49%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK S +  + ++++  ++ M +   KPDV     LI    +      A++V + +   G
Sbjct: 157 LIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRG 216

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              DV  YN LI GF K    +   ++ +RL +     P+VVTYNIMI  LC  G  + +
Sbjct: 217 VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDES 276

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            ++++++ ++  +  + TY+ LI      G  D A+++  E+                 G
Sbjct: 277 LEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNG 336

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C+ G + ++F+    +    CQ  V+SYN+L++ L   GK EE   +   +  +G  P 
Sbjct: 337 FCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPE 395

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY +LI  LC++G+   A+ + + A++     DAY+Y  ++   CK+GR+D AI  ++
Sbjct: 396 STTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVN 455

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G   D    N ++  F +    + A+  F ++   GC P + SYNT+   L  + 
Sbjct: 456 QMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAE 515

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A   + EML K  +PD IT + L+  LC++  ++ A+ L        F+P +  YN
Sbjct: 516 RFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYN 575

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I++ G C   ++ +++++ + M    C PN  T   L+EG+
Sbjct: 576 ILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 224/472 (47%), Gaps = 58/472 (12%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YG-EPDVFAYNALISGFCKANQIELA 125
           CK DV +   +IK + + + SNKA+   + ++  +G +P V +YN L++ F + N+ + A
Sbjct: 78  CKEDVAL--TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
                   S   SP++ TYNI+I   C +  IE A  + D +   N KP V +Y  LI  
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195

Query: 186 TMLEGQTDKAMKLLDEMGM--------CKKGMVGQAFQ----------FVRSLESRGCQP 227
            +  G    A+K+ DEM +        C   ++   F+          + R ++     P
Sbjct: 196 MVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYP 255

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++YN+++  L   G+++E  ++   M     E ++ TYS LI  LC  G  + AV V 
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVY 315

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +   E  L  DA +++ +++ +C+ G++  + E    M  + C   +V+YN ++    +N
Sbjct: 316 KEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFEN 374

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++A+ I+E L   GC P  ++Y  +   L  +G   +AL +  E      + D   Y
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAY 434

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFR------------------------------- 436
           +S++  LC++G +DEA+ ++  M+   ++                               
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494

Query: 437 ----PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               PT++SYN +I G CK  R +E+   +  M EK  KP+  T  LL++G+
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 201/416 (48%), Gaps = 19/416 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+FDESL   E M  N  + D+   + LI    +    + AVRV  EI+E     D  
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +NA+++GFC+A +I+ + + L  +  +     VV+YNI+I  L   G +E A  +++ L
Sbjct: 329 THNAMLNGFCRAGKIKESFE-LWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELL 387

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +  C+P   TY +LI      G+ +KA+K+  E                  G+CK+G +
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRM 447

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   V  ++ RG + D    N L+   +   K E+      EM  +G  P +V+Y+ L
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  +  +A   ++   EK   PD  +   L+   C++ ++++A+      +  G 
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGF 567

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PDI  YN ++   C     + AL+++  +    C PN+ + NT+   L+   D  +A  
Sbjct: 568 KPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASE 627

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +   +L  G+ PD I+YN  I  LC    + +A+  L D  +    PT +++NI++
Sbjct: 628 IWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 188/394 (47%), Gaps = 29/394 (7%)

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTI-----LIQATMLEGQTDKAMKLLDEMGMCKK 207
           SR    SA  VF  +LR     + +   +     +++A     + D A+ ++      K 
Sbjct: 37  SRNKSHSA-HVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIKAYA--KN 93

Query: 208 GMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            M  +A    ++++   GC+P V SYN LL   + + +W+  E       S  + PN+ T
Sbjct: 94  KMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQT 153

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ILI   C+  + E A+ +L     + L PD +SY  LI+   K G L  A++  D M 
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMS 213

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDK 385
             G + D+  YN ++  F K+G+ D+  EI+E+L  D    PNV +YN M + L   G  
Sbjct: 214 VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRF 273

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             +L +   M     E D  TY+SLI  LC  G +D AV +  ++  +      +++N +
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAM 333

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL----- 500
           + GFC+  +I ES E+   M ++ C+    +Y +LI+G+   G   EA+ +   L     
Sbjct: 334 LNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGC 392

Query: 501 --------VSMHAISRDTFKRLNRTFPLLDVYKE 526
                   V +H + ++   RLN+    L ++KE
Sbjct: 393 RPESTTYGVLIHGLCKNG--RLNKA---LKIFKE 421



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 18/217 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKY 101
           LI    RA K ++++ F   M   GC P +V    LIK   + ER S     V E+LEK 
Sbjct: 472 LINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+   + L+ G C+  +IE+A  +  +   +GF PD+  YNI++  LCS   +E A 
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           +++  + R  C P ++T   L++        +KA ++ D +                 G+
Sbjct: 592 QLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           C    +  A +F+    +RG  P  +++N+L+R  +N
Sbjct: 652 CSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 221/429 (51%), Gaps = 19/429 (4%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E++     M+  G +P +   + L+    + R  +  + +++ +E  G +P+V+ +   I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
               +A +I  A ++L R+   G  PDVVTY ++I +LC+   ++ A +VF+++     K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P  +TY      T+L+  +D   + LD +            QF   +E  G  PDV+++ 
Sbjct: 326 PDRVTYI-----TLLDRFSDN--RDLDSVK-----------QFWSEMEKDGHVPDVVTFT 367

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           +L+  L   G + E    +  M  +G+ PN+ TY+ LI  L R  + +DA+++    +  
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+ P AY+Y   I  Y K G    A+E  + M + G  P+IV  N  L +  K G   +A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            +IF  L D+G  P+  +YN M       G+   A+ ++SEM+  G EPD I  NSLI+ 
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           L +   VDEA  + + M+  + +PTV++YN ++ G  K  +I E+IE+   M +KGC PN
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607

Query: 474 ETTYVLLIE 482
             T+  L +
Sbjct: 608 TITFNTLFD 616



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 207/437 (47%), Gaps = 20/437 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           RAGK +E+   ++ M   GC PDVV  T LI      RK + A  V E ++    +PD  
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L+  F     ++   +    +   G  PDVVT+ I++ +LC  G    AF   D +
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P + TY  LI   +   + D A++L   M                  ES G +P
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM------------------ESLGVKP 431

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y + +      G      +   +M ++G+ PN+V  +  + SL + G+  +A  + 
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K+ GL PD+ +Y+ ++  Y K G +D AI+ L  M+ +GC PD++  N+++    K 
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              D+A ++F ++ ++   P V +YNT+ + L  +G    A+ +   M+ KG  P+ IT+
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+L  CLC++  V  A+ +L  M      P V +YN II G  K  ++ E++     M +
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-K 670

Query: 468 KGCKPNETTYVLLIEGI 484
           K   P+  T   L+ G+
Sbjct: 671 KLVYPDFVTLCTLLPGV 687



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 239/544 (43%), Gaps = 92/544 (16%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
            + G+ DE++  +  M+ NGC+PDV++   LI   ++  + ++A ++ M + E   +P V 
Sbjct: 515  KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN L++G  K  +I+ A ++ + +  +G  P+ +T+N +   LC    +  A K+  ++
Sbjct: 575  TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
            +   C P V TY  +I   +  GQ  +AM    +M                G+ K  ++ 
Sbjct: 635  MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694

Query: 212  QAFQFVRS-LESRGCQPDVISYNMLLRTLLNMGKWEEG----EKLMTEMISR-------- 258
             A++ + + L +   QP  + +  L+ ++L     +      E+L+   I R        
Sbjct: 695  DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754

Query: 259  -------------------------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
                                     G++P + TY++LI  L      E A DV    K  
Sbjct: 755  IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814

Query: 294  GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            G  PD  +Y+ L+ AY K G++D   E    M +  C  + + +N +++   K GN D A
Sbjct: 815  GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874

Query: 354  L------------------------------------EIFEKLSDVGCPPNVSSYNTMFS 377
            L                                    ++FE + D GC PN + YN + +
Sbjct: 875  LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934

Query: 378  ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                +G+   A  +   M+ +G+ PD  TY+ L+ CLC  G VDE +    +++ +   P
Sbjct: 935  GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994

Query: 438  TVISYNIIILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             V+ YN+II G  K+ R+ E++ +   M   +G  P+  TY  LI  +G  G   EA ++
Sbjct: 995  DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054

Query: 497  ANAL 500
             N +
Sbjct: 1055 YNEI 1058



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 228/513 (44%), Gaps = 61/513 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            + GK  E++   E MV  GC P+ +    L     +  +   A++++ ++++    PDVF
Sbjct: 585  KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN +I G  K  Q++ A     +++   + PD VT   ++  +    +IE A+K+    
Sbjct: 645  TYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNF 703

Query: 168  LRDNC--KPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKG-------------- 208
            L  NC  +P  + +  LI + + E   D A+   + +   G+C+ G              
Sbjct: 704  LY-NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762

Query: 209  -------------------------------------MVGQAFQFVRSLESRGCQPDVIS 231
                                                 M+  A      ++S GC PDV +
Sbjct: 763  NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822

Query: 232  YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AA 290
            YN LL      GK +E  +L  EM +   E N +T++I+IS L + G  +DA+D+     
Sbjct: 823  YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             ++  +P A +Y PLI    K GRL  A +  + M+  GC P+   YN ++  F K G A
Sbjct: 883  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D A  +F+++   G  P++ +Y+ +   L   G     L    E+   G+ PD + YN +
Sbjct: 943  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002

Query: 411  ISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
            I+ L +   ++EA+ L  +M+++R   P + +YN +IL       + E+ ++   +   G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062

Query: 470  CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +PN  T+  LI G    G    A  +   +V+
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 21/364 (5%)

Query: 117  CKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            CK N +  A  + ++  +  G  P + TYN++IG L    MIE A  VF Q+    C P 
Sbjct: 760  CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819

Query: 176  VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            V TY  L                LD  G  K G + + F+  + + +  C+ + I++N++
Sbjct: 820  VATYNFL----------------LDAYG--KSGKIDELFELYKEMSTHECEANTITHNIV 861

Query: 236  LRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            +  L+  G  ++   L  +++S R   P   TY  LI  L + G+  +A  +     + G
Sbjct: 862  ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
              P+   Y+ LI+ + K G  D A      M+ +G  PD+  Y+ ++   C  G  D+ L
Sbjct: 922  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LSKGIEPDEITYNSLISC 413
              F++L + G  P+V  YN + + L  S     AL + +EM  S+GI PD  TYNSLI  
Sbjct: 982  HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041

Query: 414  LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            L   GMV+EA  +  +++     P V ++N +I G+  + +   +  V   M   G  PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

Query: 474  ETTY 477
              TY
Sbjct: 1102 TGTY 1105



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/529 (24%), Positives = 230/529 (43%), Gaps = 60/529 (11%)

Query: 32  SFDVKETQFMKLIKRSF--RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           S  VK T +  ++   +  ++G    +L   E M   G  P++V C   +    +  +  
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +A ++   L+  G  PD   YN ++  + K  +I+ A K+L  +   G  PDV+  N +I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            +L     ++ A+K+F ++     KPTV+TY  L+      G+  +A++L + M      
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       +CK   V  A + +  +   GC PDV +YN ++  L+  G+ +E    
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYC 310
             +M  + + P+ VT   L+  + +    EDA  ++          P    ++ LI +  
Sbjct: 666 FHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724

Query: 311 KDGRLDLAIEFLDYMISDGCL-------------------------------------PD 333
            +  +D A+ F + ++++G                                       P 
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  YN ++    +    + A ++F ++   GC P+V++YN +  A   SG       +  
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKT 452
           EM +   E + IT+N +IS L + G VD+A+ L  D+ S R F PT  +Y  +I G  K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            R+ E+ ++   M + GC+PN   Y +LI G G  G    A  L   +V
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 182/393 (46%), Gaps = 28/393 (7%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
            LI         D ++ F E +VANG C+    +   +I+      K N       + EK+
Sbjct: 719  LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR---YSCKHNNVSGARTLFEKF 775

Query: 102  G-----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                  +P +  YN LI G  +A+ IE+A  V  +++S G  PDV TYN ++ +    G 
Sbjct: 776  TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835

Query: 157  IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
            I+  F+++ ++    C+   IT+ I+I   +  G  D A+ L  ++              
Sbjct: 836  IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895

Query: 203  ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                G+ K G + +A Q    +   GC+P+   YN+L+      G+ +    L   M+  
Sbjct: 896  PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955

Query: 259  GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            G+ P++ TYS+L+  LC  G+ ++ +   +  KE GL PD   Y+ +I+   K  RL+ A
Sbjct: 956  GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015

Query: 319  IEFLDYM-ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            +   + M  S G  PD+  YN+++      G  ++A +I+ ++   G  PNV ++N +  
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 378  ALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
                SG    A  +   M++ G  P+  TY  L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 35/311 (11%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++ R  + D  +Y  + ++L   G  ++    + +M   G   N  +Y+ LI  L +   
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A++V R    +G  P   +Y  L+    K   +D  +  L  M + G  P++  +  
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS----------------- 382
            +    + G  ++A EI +++ D GC P+V +Y  +  AL ++                 
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323

Query: 383 --GDKIRALGMI----------------SEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              D++  + ++                SEM   G  PD +T+  L+  LC+ G   EA 
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             L  M      P + +YN +I G  +  R+++++E+   M   G KP   TY++ I+  
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443

Query: 485 GYGGWRAEAME 495
           G  G    A+E
Sbjct: 444 GKSGDSVSALE 454



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N +L  L   GK EE   +   M  R ++ +  TY  +  SL   G  + A   LR  +E
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G   +AYSY+ LI    K      A+E    MI +G  P +  Y++++    K  + D 
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
            + + +++  +G  PNV ++      L  +G    A  ++  M  +G  PD +TY  LI 
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC    +D A  +   M++ R +P  ++Y  ++  F   R ++   +  + M + G  P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
           +  T+ +L++ +   G   EA +  + +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVM 389


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 211/431 (48%), Gaps = 21/431 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PDVFAYNALISGFCKANQIE 123
           GC PDV   T L+K    E+K  +A  ++ ++ + G+   P+V +Y  +I GF K   + 
Sbjct: 210 GCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVG 269

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +  ++   G  P+VVT N +I  LC    ++ A  V  Q++ ++  P   TY  LI
Sbjct: 270 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLI 329

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
              +  GQ  +A+++L EM                     G +P+V++Y+ML+  L   G
Sbjct: 330 HGYLSSGQWTEAVRILKEM------------------SRDGQRPNVVTYSMLIDCLCKSG 371

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
              E  ++   MI  G +PN  TY  L+     +G   D  +V     + G+ P  + ++
Sbjct: 372 LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             I AYCK GRLD A    + M   G +PDIV Y T++   CK G  D A+  F ++ D 
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P++ ++NT+       G   +A  +  EM+ +GI P+  T+NS+I  L ++G V EA
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             L   M     +P V+SYN +I G+     + E +++L  M   G KP   T+  L++G
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611

Query: 484 IGYGGWRAEAM 494
           +   G + + +
Sbjct: 612 MVSMGLKPDVV 622



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 198/431 (45%), Gaps = 30/431 (6%)

Query: 96  EILEKYGEPDVFAYNALISGFCKA-------NQIELANKVLDRLRSRG---FSPDVVTYN 145
           E+L++     ++A N L++   +A       +   LA  + +R+   G    +PD+ T+ 
Sbjct: 89  ELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFG 148

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL----LDE 201
           I+I   C  G +   F    Q+++   +   +T+T L++    E +T  AM +    + E
Sbjct: 149 ILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPE 208

Query: 202 M--------------GMCKKGMVGQAFQFVRSLESRG--CQPDVISYNMLLRTLLNMGKW 245
           +              G+C +    +A + +  +   G  C P+V+SY  ++      G  
Sbjct: 209 LGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDV 268

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            +   L  +M+  G+ PNVVT + +I  LC+    + A  VL+   ++ + P+  +Y+ L
Sbjct: 269 GKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSL 328

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  Y   G+   A+  L  M  DG  P++V Y+ ++   CK+G   +A EIF  +   G 
Sbjct: 329 IHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQ 388

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            PN S+Y ++     + G+ +    +   M+  G+ P    +N  I   C+ G +DEA  
Sbjct: 389 KPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASL 448

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
               M+   F P +++Y  +I G CK  R+++++     M + G  P+  T+  LI G  
Sbjct: 449 TFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFA 508

Query: 486 YGGWRAEAMEL 496
             G   +A EL
Sbjct: 509 LHGKWEKAEEL 519



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 20/171 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK++++      M+  G  P+V     +I K F+E K  +A ++ +++ 
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMP 559

Query: 100 KYG-EPDVFAYNALISGFCKANQIELA-------------------NKVLDRLRSRGFSP 139
           + G +P+V +YN +I G+  A ++                      N +LD + S G  P
Sbjct: 560 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 619

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
           DVVT   +I S C  G IE    +F ++L    K   IT  I ++   ++ 
Sbjct: 620 DVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKA 670


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 18/459 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +A +  ++   ++ M   G  P+V++   LI    +    NKA+ + +++   G
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  YN LI G+CK+ Q ++A ++L  + S GF+ +  ++  +I  LCS  M +SA 
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA----MKLLDE-------------MGM 204
           +   ++L  N  P     T LI      G+  KA    +K L++              G+
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + + F+  + +  RG   D +SYN L+       K +E    M EM+ +GL+P+ 
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDN 567

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TYSILI  L    K E+A+      K  G+ PD Y+Y  +I   CK  R +   +  D 
Sbjct: 568 YTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDE 627

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S+   P+ V YN ++ A+C++G    ALE+ E +   G  PN ++Y ++   +     
Sbjct: 628 MMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 687

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++ EM  +G+EP+   Y +LI    + G + +   LL +M S    P  I+Y +
Sbjct: 688 VEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 747

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I G+ +   + E+  +L  M EKG  P+  TY   I G
Sbjct: 748 MIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYG 786



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 219/469 (46%), Gaps = 18/469 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           +G++DE+  F E MV  G +P ++  + L+K   + ++   A  V+ E+ EK   P+V  
Sbjct: 300 SGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIV 359

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LI    +A  +  A ++ D + S+G S    TYN +I   C  G  + A ++  ++L
Sbjct: 360 YNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEML 419

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                    ++T +I         D A++ + EM                 G+CK G   
Sbjct: 420 SIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +      ++G   D  + N LL  L   GK EEG ++  E++ RG   + V+Y+ LI
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C + K ++A   +    +KGL PD Y+Y  LI       +++ AI+F      +G +
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMI 599

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+  Y+ ++   CK    ++  ++F+++      PN   YN +  A   SG    AL +
Sbjct: 600 PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL 659

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +M  KGI P+  TY SLI  +     V+EA  LL +M      P V  Y  +I G+ K
Sbjct: 660 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGK 719

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             ++ +   +L  M  K   PN+ TY ++I G    G   EA  L + +
Sbjct: 720 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM 768



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 203/440 (46%), Gaps = 18/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
           +   G  P    C  L+    +  +  K      ++ K   PDV+ +   I+ FCK  ++
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKV 268

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E A ++  ++   G  P+VVTYN +I  L   G  + AF   ++++    +PT+ITY+IL
Sbjct: 269 EEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSIL 328

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           ++                  G+ K   +G A+  ++ +  +G  P+VI YN L+ +L+  
Sbjct: 329 VK------------------GLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEA 370

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   +  ++   M+S+GL     TY+ LI   C+ G+ + A  +L+     G   +  S+
Sbjct: 371 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSF 430

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             +I   C     D A+ F+  M+     P      T+++  CK+G   +A+E++ K  +
Sbjct: 431 TSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLN 490

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G   +  + N +   L  +G       +  E+L +G   D ++YN+LIS  C +  +DE
Sbjct: 491 KGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDE 550

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A   + +M     +P   +Y+I+I G     ++ E+I+        G  P+  TY ++I+
Sbjct: 551 AFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMID 610

Query: 483 GIGYGGWRAEAMELANALVS 502
           G        E  +L + ++S
Sbjct: 611 GCCKAERTEEGQKLFDEMMS 630



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 184/394 (46%), Gaps = 19/394 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + F+V +  F  +I        FD +L F+  M+     P   + T LI    +  K +K
Sbjct: 421 IGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 480

Query: 91  AVRV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV + ++ L K    D    NAL+ G C+A ++E   ++   +  RGF  D V+YN +I 
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLIS 540

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             C    ++ AF   D++++   KP   TY+ILI+                  G+     
Sbjct: 541 GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIR------------------GLLNMNK 582

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A QF    +  G  PDV +Y++++       + EEG+KL  EM+S  L+PN V Y+ 
Sbjct: 583 VEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNH 642

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI + CR G+   A+++    K KG++P++ +Y  LI       R++ A   L+ M  +G
Sbjct: 643 LIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEG 702

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P++ +Y  ++  + K G   +   +  ++      PN  +Y  M       G+   A 
Sbjct: 703 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 762

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
            ++ EM  KGI PD ITY   I    + G V +A
Sbjct: 763 RLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 25/413 (6%)

Query: 73  VMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDR 131
           V CT+     F+      A+ V  +L   G  P     N L++   +A + +   +    
Sbjct: 189 VYCTQ-----FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-H 242

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           +  +G SPDV  +   I + C  G +E A ++F ++      P V+TY  +I    + G+
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
            D                  +AF F   +  RG +P +I+Y++L++ L    +  +   +
Sbjct: 303 YD------------------EAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCV 344

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
           + EM  +G  PNV+ Y+ LI SL   G    A+++      KGL+  + +Y+ LI  YCK
Sbjct: 345 LKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 404

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            G+ D+A   L  M+S G   +  ++ +++   C +   D AL    ++      P    
Sbjct: 405 SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
             T+ S L   G   +A+ +  + L+KG   D  T N+L+  LC  G ++E   +  ++ 
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              F    +SYN +I G C  ++++E+   +  M +KG KP+  TY +LI G+
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGL 577



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 269 ILISSLCRDGKTED---AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +LI   C   K +    A+DV      KG+ P   + + L+++  +        E   ++
Sbjct: 185 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HV 243

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  PD+  + T + AFCK G  ++A+E+F K+ + G  PNV +YNT+   L  SG  
Sbjct: 244 VCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRY 303

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A     +M+ +G+EP  ITY+ L+  L +   + +A  +L +M    F P VI YN +
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           I    +   +N++IE+   M  KG     +TY  LI+G    G    A  L   ++S+
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSI 421



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 7/154 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+S + E R +            +  LIK      + +E+   +E M   G +P+V   T
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711

Query: 77  KLIKKFFQERKSNKAVRV----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
            LI  +    K  + V+V     E+  K   P+   Y  +I G+ +   +  A+++L  +
Sbjct: 712 ALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM 768

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           R +G  PD +TY   I     +G +  AFK  D+
Sbjct: 769 REKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802


>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
 gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 217/465 (46%), Gaps = 54/465 (11%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P    YNA+I    K+N ++LA     ++RS G  PD  TYNI+I  +C +G+++ A +
Sbjct: 177 KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIR 236

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------------ 204
           +  Q+ ++  +P V TYTILI   ++ G+ D+A+K L+ M +                  
Sbjct: 237 LVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296

Query: 205 -----CK-----------------------------KGMVGQAFQFVRSLESRGCQPDVI 230
                CK                               M  +  QF+R +  RG  PD  
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N  +  LL      E  ++    +SRG++P    Y +L+ +L    +  +    L+  
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              GL    YSY+ +I   CK  R++ A  FL  M   G  P++V +NT L+ +   G+ 
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +   + EKL   G  P+V +++ + + L  + +   A     EML  GIEP+EITYN L
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I   C  G  D +V L   M+     P + +YN  I  FCK R++ ++ E+L  M   G 
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF-KRL 514
           KP+  TY  LI+ +   G  +EA E+ ++ +  H    D++ KRL
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSS-IERHGCVPDSYTKRL 640



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 217/454 (47%), Gaps = 22/454 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++   D +    + M ++GCKPD      LI    ++   ++A+R+++ +E+ G  P+VF
Sbjct: 192 KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVF 251

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI GF  A +++ A K L+ +R R  +P+  T    +  +        AF+V    
Sbjct: 252 TYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGF 311

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE------ 221
           +  +     + Y  ++          +  + L ++G  ++G +  +  F  ++       
Sbjct: 312 MEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG--ERGYIPDSSTFNAAMSCLLKGH 369

Query: 222 -------------SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                        SRG +P    Y +L++ LLN  ++ EG++ + +M   GL  +V +Y+
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYN 429

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I  LC+  + E+A   L   +++G++P+  +++  +S Y   G +      L+ ++  
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  PD++ ++ I+   C+      A + F+++ + G  PN  +YN +  +  S+GD  R+
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + + ++M   G+ PD   YN+ I   C+   V +A  LL  M     +P   +Y+ +I  
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             ++ R +E+ E+ +++   GC P+  T  L+ E
Sbjct: 610 LSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 12/186 (6%)

Query: 305 LISAYCKDGRLDLAIEFLD------YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           L +A  + G L L++E L       Y ISD  +        ++ ++ + G A    ++F 
Sbjct: 116 LGNALFRKGPLLLSMELLKEIRDSGYRISDELMC------VLIGSWGRLGLAKYCNDVFA 169

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++S +G  P+   YN +  AL  S     A     +M S G +PD  TYN LI  +C+ G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           +VDEA+ L+  ME    RP V +Y I+I GF    R++E+++ L  M  +   PNE T  
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289

Query: 479 LLIEGI 484
             + GI
Sbjct: 290 TFVHGI 295



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 35/270 (12%)

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           +L+ E+   G   +     +LI S  R G  +   DV       G+ P    Y+ +I A 
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            K   LDLA      M SDGC PD   YN ++   CK G  D+A+ + +++   G  PNV
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT----------------------- 406
            +Y  +      +G    AL  +  M  + + P+E T                       
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG 310

Query: 407 ------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
                       Y++++ CL  + M  E    L  +    + P   ++N  +    K   
Sbjct: 311 FMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHD 370

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           + E+  +      +G KP    Y++L++ +
Sbjct: 371 LVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI+     G  D S+     M  NG  PD+      I+ F + RK  KA  +++
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            + + G +PD F Y+ LI    ++ +   A ++   +   G  PD  T
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 52/124 (41%)

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           +AL+  G  + ++ ++ E+   G    +     LI    R G+      +   +     +
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P+   YN +I    K+  ++ +      M   GCKP+  TY +LI G+   G   EA+ L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237

Query: 497 ANAL 500
              +
Sbjct: 238 VKQM 241


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 236/465 (50%), Gaps = 10/465 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI      G+ D +   +  ++  GC+P+VV  T L+K F    K   A+ +  E++
Sbjct: 92  FNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMV 151

Query: 99  EKYGEPDVFAYNALISGFCKA--NQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRG 155
            +    D   Y  LI+G CK+   +   A ++L ++  R    P+++ YN ++  LC  G
Sbjct: 152 ARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDG 211

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I  A  +  +++     P + TY+ LI      GQ  +   LL+  G C    V +A +
Sbjct: 212 NINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLN--GFCLNNKVDEARE 269

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               +  RG Q D+I+YN+L+       K  E  KL   M+ RG +P+ +TY+IL+   C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              K ++A ++     E+GL PD +SY+ LI  YCK  R+  A+  L+ M     +P+I+
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGC--PPNVSSYNTMFSALWSSGDKIRALGMIS 393
            YN+++   CK+G    A ++ +++    C  PP+V++YN +  +L       +A+    
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMH-YCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 394 EML-SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            ++  +   P+  +YN LIS  C++  +DEA+ L   M      P +++YNI++      
Sbjct: 449 HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNG 508

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           ++++++I +L  + ++G  PN  TY +LI G+  GG    A +++
Sbjct: 509 QQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 224/487 (45%), Gaps = 39/487 (8%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
           D+++     MV     P +V  TK++    + R    A+ +  ++E  G  P    +N L
Sbjct: 36  DDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNIL 95

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   Q++ A  V+ ++   G  P+VVT+  ++   C    +  A  ++D+++    
Sbjct: 96  INCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRI 155

Query: 173 KPTVITYTILIQATMLE--GQTDKAMKLLDEM------------------GMCKKGMVGQ 212
           +   + Y  LI        G+   A++LL +M                  G+CK G + +
Sbjct: 156 RFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINE 215

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMG----------------KWEEGEKLMTEMI 256
           A      +  +G  PD+ +Y+ L+  L   G                K +E  +L   MI
Sbjct: 216 ARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMI 275

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            RG + +++ Y+IL++  C + K  +A  +     E+G  PD  +Y  L+  YC   ++D
Sbjct: 276 ERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVD 335

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A      MI  G +PD+ +YN ++  +CK     +A+ + E +      PN+ +YN++ 
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVV 395

Query: 377 SALWSSGDKIRALGMISEM-LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR- 434
             L  SG  + A  ++ EM       PD  TYN L+  LCR   V++A+     +   R 
Sbjct: 396 DGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERS 455

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F P V SYNI+I G CK RR++E+I +   M  K   P+  TY +L++ +  G    +A+
Sbjct: 456 FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAI 515

Query: 495 ELANALV 501
            L   +V
Sbjct: 516 ALLVQIV 522



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 191/389 (49%), Gaps = 42/389 (10%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVM--EILEKYGEPDVFAYNALISGFCKA------- 119
           KP+++M   ++    ++   N+A RV+  +++ +   PD+F Y++LI G C+A       
Sbjct: 194 KPNLIMYNTVVHGLCKDGNINEA-RVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVT 252

Query: 120 ---------NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
                    N+++ A ++ + +  RG   D++ YNI++   C    +  A K+F  ++  
Sbjct: 253 SLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVER 312

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             +P  ITYTIL+    L  + D+A  L   M                 G CK   VG+A
Sbjct: 313 GEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEA 372

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVTYSILIS 272
              +  +  +   P++I+YN ++  L   G   +  KL+ EM       P+V TY+IL+ 
Sbjct: 373 MNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLE 432

Query: 273 SLCRDGKTEDAVDVLRAAK-EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           SLCR    E A+   +    E+   P+ +SY+ LIS  CK+ RLD AI   ++M     +
Sbjct: 433 SLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLV 492

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PDIV YN +L A       D+A+ +  ++ D G  PN+ +YN + + L   G + +    
Sbjct: 493 PDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGL-HKGGRPKTAQK 551

Query: 392 ISEMLS-KGIEPDEITYNSLISCLCRDGM 419
           IS  LS +G  PD  TY  +I+ LC+ G+
Sbjct: 552 ISLYLSIRGYHPDVKTY--IINELCKGGL 578



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 181/403 (44%), Gaps = 37/403 (9%)

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           CK + I+ A  +  R+      P +V +  ++G++       +A  ++  +      P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +T+ ILI                     C  G +  AF  +  +   GC+P+V+++  L+
Sbjct: 90  VTFNILINC------------------FCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLM 131

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD--GKTEDAVDVLRAAKEKG 294
           +      K  +   +  EM++R +  + V Y  LI+ LC+   GK   AV +L+  +E+ 
Sbjct: 132 KGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQ 191

Query: 295 LT-PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI------------- 340
           L  P+   Y+ ++   CKDG ++ A      MI  G  PDI  Y+++             
Sbjct: 192 LVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEV 251

Query: 341 ---LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
              L  FC N   D+A E+F  + + G   ++ +YN + +    +     A  +   M+ 
Sbjct: 252 TSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVE 311

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G +PD ITY  L+   C    VDEA  L   M      P V SYNI+I G+CK  R+ E
Sbjct: 312 RGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGE 371

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++ +L  MF K   PN  TY  +++G+   G   +A +L + +
Sbjct: 372 AMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEM 414



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 19/304 (6%)

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           L     CK   +  A      +      P ++ +  +L T+  M  +     L T M  +
Sbjct: 24  LPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYK 83

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+ P  VT++ILI+  C  G+ + A  V+    + G  P+  ++  L+  +C + ++  A
Sbjct: 84  GVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDA 143

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKN--GNADQALEIFEKLSDVG-CPPNVSSYNTM 375
           +   D M++     D V Y T++   CK+  G    A+++ +K+ +     PN+  YNT+
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM---------------- 419
              L   G+   A  + S+M+ +GI PD  TY+SLI  LCR G                 
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNK 263

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           VDEA  L   M     +  +I+YNI++ G+C   ++ E+ ++   M E+G +P+  TY +
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 480 LIEG 483
           L+ G
Sbjct: 324 LMHG 327



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 3/232 (1%)

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            S C+    +DAV +     +    P    +  ++    K      AI+    M   G +
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  V +N ++  FC  G  D A  +  K+   GC PNV ++ T+      +   + AL +
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRD--GMVDEAVGLLVDMESTRF-RPTVISYNIIILG 448
             EM+++ I  D++ Y +LI+ LC+   G    AV LL  ME  +  +P +I YN ++ G
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            CK   INE+  + + M  +G  P+  TY  LI G+   G R E   L N  
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGF 258



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 23/115 (20%), Positives = 54/115 (46%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +   M+     P  + +  ++  + +      A+ L   ME     P  +++NI+I 
Sbjct: 38  AVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILIN 97

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            FC   +++ +  V+  + + GC+PN  T+  L++G        +A+ + + +V+
Sbjct: 98  CFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVA 152


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 209/413 (50%), Gaps = 20/413 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           IL +   P++  YN LI G C  ++I  A ++  R++  G +PDVVTY  +I  LC  G 
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN 189

Query: 157 IESAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKK 207
           I  A K+  ++L D      NCKP VITY I++      G+ D+A +L +EM   GM   
Sbjct: 190 INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN 249

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            M+ Q           G QPD++++N+L+ TL   GK  E +KL+  MI  G+ P++VTY
Sbjct: 250 EMLDQ-----------GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 298

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + LI   C  G    A ++  +   KG  PD  SY+ LI+ Y K  +++ A++  + M+ 
Sbjct: 299 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 358

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P+++ Y+++L      G  D A ++F  +   G   N  +Y      L  +     
Sbjct: 359 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 418

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ + +E+ S   + +    N LI  LC+ G ++ A  L   + +    P V++Y I+I 
Sbjct: 419 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 478

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           GFC+  +++++  ++  M   GC P+  TY  L+ G        E ++L + +
Sbjct: 479 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 531



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 250/500 (50%), Gaps = 36/500 (7%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
            +L+F   M+ +   P +     L+    + +  ++   +   +   G   D    N L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           +  C  N++         +  RG+SP++VTYN +I  LC    I  A ++F ++ +  C 
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V+TY  LI+     G  + A+KL  EM              +   E   C+P+VI+YN
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEM-----------LNDISRYEIN-CKPNVITYN 219

Query: 234 MLLRTLLNMGKWEEGEKLM----------TEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           +++  L  +G+ +E ++L            EM+ +GL+P++VT+++LI +LC++GK  +A
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L    E G+ PD  +Y+ LI  +C  G L+ A E    M S GC PD+++YN ++  
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K    ++A++++ ++  VG  PNV +Y+++   ++ +G    A  + S M + GI  +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY   +  LC++  + EA+ L  +++S+ F+  + + N +I G CK  ++  + E+  
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS---MHAISRD--TFKRLNRTF 518
            +  +G +PN  TY ++I G      R   ++ AN L+     +  + D  T+  L R F
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGF----CREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 515

Query: 519 ----PLLDVYKEISHLATKD 534
                L +V + +  +A KD
Sbjct: 516 YESNKLEEVVQLLHRMAQKD 535



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 207/445 (46%), Gaps = 34/445 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           +  E       ++  G  P++V    LIK    E + ++A R+   ++K G  PDV  Y 
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178

Query: 111 ALISGFCKANQIELANKVLDRLRSR------GFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
            LI G C    I +A K+   + +          P+V+TYNI++  LC  G  + A ++F
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 165 DQL----------LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           +++          L    +P ++T+ +LI     EG+  +A KLL  M            
Sbjct: 239 EEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 298

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G C  G +  A +   S+ S+GC+PDVISYN+L+       K EE  KL  EM+ 
Sbjct: 299 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 358

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G  PNV+TY  L+  +   GK +DA  +    K  G+  ++Y+Y   +   CK+  L  
Sbjct: 359 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 418

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A++    + S     +I N N ++   CK G  + A E+FEKLS+ G  PNV +Y  M  
Sbjct: 419 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 478

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                G   +A  +I +M + G  PD ITYN+L+        ++E V LL  M      P
Sbjct: 479 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538

Query: 438 TVISYNIIILGFCKTRRINESIEVL 462
             I+ +I++    K  +  E + +L
Sbjct: 539 DAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 158/316 (50%), Gaps = 18/316 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M+  G +PD+V    LI    +E K  +A +++ ++ + G  PD+  YN+LI GFC    
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A ++   + S+G  PDV++YN++I        +E A K+++++L    +P VITY  
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           L++   L G+ D A KL   M                 G+CK   + +A +    L+S  
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            + ++ + N L+  L   GK E   +L  ++ + G EPNVVTY+I+I   CR+G+ + A 
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +++  +  G TPD  +Y+ L+  + +  +L+  ++ L  M      PD +  + ++   
Sbjct: 491 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550

Query: 345 CKNGNADQALEIFEKL 360
            K+    + L +  + 
Sbjct: 551 SKDEKYQECLHLLPRF 566



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 19/275 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+     G  + +     SM + GC+PDV+    LI  + +  K  +A+++  E+L
Sbjct: 298 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P+V  Y++L+ G   A +++ A K+   +++ G + +  TY I +  LC    + 
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A K+F +L   N K  +     LI      G+ + A +L +++                
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C++G V +A   ++ +E+ GC PD+I+YN L+R      K EE  +L+  M  + + 
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGL 295
           P+ +T SI++  L +D K ++ + +L R   +KG+
Sbjct: 538 PDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 309 YCKDGRLDL--AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           +CK G +    A+ F   M+     P + ++N +L+   K  +  Q   ++ ++   G  
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            +  + N + + L +           + +L +G  P+ +TYN+LI  LC +  + EA  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM------FEKGCKPNETTYVLL 480
            + M+     P V++Y  +I G C T  IN ++++   M      +E  CKPN  TY ++
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 481 IEGIGYGGWRAEAMEL 496
           ++G+   G   EA +L
Sbjct: 222 VDGLCKVGREDEAKQL 237


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 197/407 (48%), Gaps = 19/407 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + +  +   A  V+ ++   G  P +   NAL+    +A+ + L  KV + +   G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
            SPDV TY+ +I + C     ++A KV  ++    C    +TY +LI             
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA------------ 287

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+ G V +AF F + +E  G  PD  +Y  L+  L    +  E + L+ EM 
Sbjct: 288 ------GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
              L+PNVV Y+ LI    R+G  ++A  +++     G+ P+  +YD L+   CK G++D
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  M+ D   PD + YN I+    ++ +   A  +  ++ + G  PNV +Y+ M 
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L  SG+  +A  ++ EM +KG++P+   Y  LIS  CR+G V  A  +   M      
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 521

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           P +  YN +I G  K  R+ ES +  A M E+G  PNE TY  LI G
Sbjct: 522 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 241/542 (44%), Gaps = 66/542 (12%)

Query: 7   CINPKSNERVRV---SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C + +SNE   +    S AE +PN            +  LI    R G  DE+   I+ M
Sbjct: 325 CKSRRSNEAKALLDEMSCAELKPNV---------VVYANLIDGFMREGNADEAFKMIKEM 375

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQI 122
           VA G +P+ +    L++   +  + ++A  ++ +++     PD   YN +I G  + +  
Sbjct: 376 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 435

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A ++L  + + G SP+V TY+IMI  LC  G  E A  + +++     KP    Y  L
Sbjct: 436 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 495

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I     EG    A ++ D+M                 G+ K G V ++ ++   ++ RG 
Sbjct: 496 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 555

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY------------------ 267
            P+  +Y+ L+   L  G  E  E+L+  M+  GL+PN V Y                  
Sbjct: 556 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 615

Query: 268 -----------------SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                             ILI +L   G  E A  VL   ++ G  PD + Y  LIS  C
Sbjct: 616 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 675

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K    + A   LD M   G  P+IV YN ++   CK+G+   A  +F  +   G  PN  
Sbjct: 676 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 735

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y ++       GD   A  + +EML+ GI PD   Y+ L +     G +++A+ L+ +M
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
              R   ++ S+N ++ GFCK  ++ E++++L  +  +G  PN  T   +I G+   G  
Sbjct: 796 -FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854

Query: 491 AE 492
           +E
Sbjct: 855 SE 856



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 247/586 (42%), Gaps = 124/586 (21%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+  ++   +  M   G  P +  C  L+K   +        +V E +   G  PDV+
Sbjct: 186 KSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 245

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF------ 161
            Y+ LI  +CK  + + A KVL  +R RG   + VTYN++I  LC  G +E AF      
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 162 -----------------------------KVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
                                         + D++     KP V+ Y  LI   M EG  
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQA---------------------- 213
           D+A K++ EM                 G+CK G + +A                      
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 214 -------------FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
                        F+ +  +E+ G  P+V +Y++++  L   G+ E+   L+ EM ++GL
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +PN   Y+ LIS  CR+G    A ++     +  + PD Y Y+ LI    K GR++ + +
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN------------ 368
           +   M   G LP+   Y+ ++  + KNG+ + A ++ +++ D G  PN            
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 369 -------VSS----------------YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
                  VSS                Y  +   L SSG+   A  ++S +   G  PD  
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+SLIS LC+    ++A G+L +M      P ++ YN +I G CK+  I+ +  V  ++
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             KG  PN  TY  LI+G    G  + A  L N +++   I+ D F
Sbjct: 726 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-GITPDAF 770



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 230/497 (46%), Gaps = 18/497 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++ + +E+   ++ M     KP+VV+   LI  F +E  +++A ++++ + 
Sbjct: 317 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 376

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+   Y+ L+ G CK  Q++ A+ +L ++      PD +TYN++I         +
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++  ++      P V TY+I+I      G+ +KA  LL+EM                
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C++G V  A +    +      PD+  YN L+  L  +G+ EE  K   +M  RGL 
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  TYS LI    ++G  E A  +++   + GL P+   Y  L+ +Y K   ++     
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+  G + D   Y  ++     +GN + A  +   +   G  P+V  Y+++ S L  
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + D+ +A G++ EM  KG++P+ + YN+LI  LC+ G +  A  +   + +    P  ++
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 736

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y  +I G CK   I+ +  +   M   G  P+   Y +L  G    G   +AM L   + 
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 796

Query: 502 SMHAISRDTFKRLNRTF 518
                S  +F  L   F
Sbjct: 797 LRGHASISSFNNLVDGF 813



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 200/420 (47%), Gaps = 37/420 (8%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV-----------------TYNI 146
           PD FA+ A+    C  +   LAN +L ++     SP VV                   ++
Sbjct: 122 PDAFAHLAM--SLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDV 179

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           ++ +    G ++ A +V   +      P++     L++  +   + D AM LL ++   +
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL---RAD-AMALLWKV---R 232

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           + MVG            G  PDV +Y+ L+     + +++  +K++ EM  RG   N VT
Sbjct: 233 EFMVGA-----------GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVT 281

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y++LI+ LCR G  E+A    +  ++ GL PD ++Y  LI+  CK  R + A   LD M 
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
                P++V Y  ++  F + GNAD+A ++ +++   G  PN  +Y+ +   L   G   
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA  ++ +M+     PD ITYN +I    R     +A  LL +ME+    P V +Y+I+I
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G C++    ++ ++L  M  KG KPN   Y  LI G    G  + A E+ + +  ++ +
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 521



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/534 (21%), Positives = 231/534 (43%), Gaps = 74/534 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           ++G+ +++   +E M   G KP+  +   LI  + +E   + A  + + + K    PD++
Sbjct: 466 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 525

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G  K  ++E + K   +++ RG  P+  TY+ +I      G +ESA ++  ++
Sbjct: 526 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    KP  + Y  L+++       +K       M                  +   G +
Sbjct: 586 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+ +  +E  G  PDV  Y+ L+  L      E+   ++ EM  +G++PN+V Y+ L
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ G    A +V  +   KGL P+  +Y  LI   CK G +  A    + M++ G 
Sbjct: 706 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   Y+ +       G+ +QA+ + E++   G   ++SS+N +       G     L 
Sbjct: 766 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLK 824

Query: 391 MISEMLSKGIEPDEITYNSLISCL------------------------------------ 414
           ++  ++ +G+ P+ +T  ++IS L                                    
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 415 -----------------CRDGMVDEAVGLLVDMESTRFRPT-VISYNIIILGFCKTRRIN 456
                            C++G +D+A+ +L D+   +  P    SY  I+   C+  +++
Sbjct: 885 NQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 943

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           E++ +L  M ++G  P+E   ++L+  +   G+  E   + + ++    + +D+
Sbjct: 944 EALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDS 997



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 187/413 (45%), Gaps = 44/413 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++ L++  F++   ++     +SM+  G   D  +   LI           A RV+  +E
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  Y++LISG CK    E A  +LD +  +G  P++V YN +I  LC  G I 
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VF+ +L     P  +TYT LI                   G CK G +  AF    
Sbjct: 717 YARNVFNSILAKGLVPNCVTYTSLID------------------GSCKVGDISNAFYLYN 758

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + + G  PD   Y++L     + G  E+   L+ EM  RG   ++ +++ L+   C+ G
Sbjct: 759 EMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRG 817

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD----LAIE-------------- 320
           K ++ + +L     +GL P+A + + +IS   + G+L     + +E              
Sbjct: 818 KMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFS 877

Query: 321 --FLDYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
             F+D MI+ G +P D+V+   ++   CK GN D+AL + + +     P   SSY  +  
Sbjct: 878 SLFMD-MINQGKIPLDVVD--DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 934

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
            L   G    AL ++ EM  +GI P E     L++ L   G + E   +L +M
Sbjct: 935 NLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 224/470 (47%), Gaps = 18/470 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+      M   GC PDVV    LI  + +  + ++  +++E + + G + DV 
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ FCK  ++E A      ++  G   +VVT++  + + C  G++  A K+F Q+
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                     TYT LI  T   G+ D A+ LLDEM                 G+CK+  V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +R +E  G + + + Y  L+         E+   L++EM ++GLE ++  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC   K ++A  +L    E GL P+   Y  ++ A  K G++  AI  L  ++  G 
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+++ Y  ++   CK G+ D+A+  F K+ D+G  PNV +Y  +   L  +G    A+ 
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +EM+ KG+  D++ Y +L+    + G + +A  L   M  +  +  +  Y   I GFC
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               + E+ EV + M   G  P+   Y  LI      G   EA+ L + +
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 220/468 (47%), Gaps = 20/468 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G  D+++  +  +      P+   C  ++ +  ++R S + VR   + E+   P+VF +N
Sbjct: 136 GLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDR-SGRLVR--RLFEQLPAPNVFTFN 192

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +I   CK  ++  A  +  R++  G  PDVVT+N +I      G ++   ++ +++ R 
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            CK  V+TY  LI      G+ + A      M                   CK+G+V +A
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    +  RG   +  +Y  L+      G+ ++   L+ EM+ +G+  NVVTY++L+  
Sbjct: 313 MKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++ K  +A DVLR  ++ G+  +   Y  LI  +  +   + A+  L  M + G   D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  Y  ++   C     D+A  +  K+ + G  PN   Y TM  A + SG    A+ M+ 
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++L  G +P+ ITY +LI  LC+ G +DEA+     M      P V +Y  ++ G CK  
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +NE++++   M  KG   ++  Y  L++G    G   +A  L   ++
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 200/423 (47%), Gaps = 18/423 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV  +N+LI G+ K  +++   ++++ +R  G   DVVTYN +I   C  G +E+A+  
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  + R+     V+T++  + A   EG   +AMKL  +M                 G CK
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A   +  +  +G   +V++Y +L+  L    K  E E ++  M   G+  N + 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI     +  +E A+ +L   K KGL  D   Y  LI   C   +LD A   L  M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P+ + Y T++ A  K+G   +A+ + +K+ D G  PNV +Y  +   L  +G   
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+   ++M   G++P+   Y +L+  LC++G ++EAV L  +M         + Y  ++
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            G+ K   ++++  + A M + G + +   Y   I G        EA E+ + ++  H I
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG-HGI 639

Query: 507 SRD 509
           + D
Sbjct: 640 APD 642



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 195/445 (43%), Gaps = 53/445 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G+ DE    +E M  +GCK DVV    LI  F +  +   A      ++
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMK 285

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G   +V  ++  +  FCK   +  A K+  ++R RG + +  TY  +I   C  G ++
Sbjct: 286 REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLD 345

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQA------------------------------TML 188
            A  + D+++R      V+TYT+L+                                T++
Sbjct: 346 DAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 189 EGQ-----TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
            G      ++KA+ LL EM                 G+C    + +A   +  ++  G +
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+ I Y  ++      GK  E   ++ +++  G +PNV+TY  LI  LC+ G  ++A+  
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               ++ GL P+  +Y  L+   CK+G L+ A++  + M+  G   D V Y  +L  + K
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN   A  +  K+ D G   ++  Y    S   +      A  + SEM+  GI PD   
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645

Query: 407 YNSLISCLCRDGMVDEAVGLLVDME 431
           YN LIS   + G ++EA+ L  +ME
Sbjct: 646 YNCLISKYQKLGNLEEAISLQDEME 670



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 19/362 (5%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  LI  + +AG+ D+++  ++ MV  G   +VV  T L+    +ERK  +A  V
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + ++EK G   +   Y  LI G       E A  +L  ++++G   D+  Y  +I  LC+
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
              ++ A  +  ++     +P  I YT ++ A                    K G V +A
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF------------------KSGKVPEA 487

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              ++ +   G QP+VI+Y  L+  L   G  +E      +M   GL+PNV  Y+ L+  
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++G   +AV +      KG++ D   Y  L+  Y K G L  A      MI  G   D
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +  Y   ++ FC      +A E+F ++   G  P+ + YN + S     G+   A+ +  
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQD 667

Query: 394 EM 395
           EM
Sbjct: 668 EM 669



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCP------------------------------- 366
           +T+L+     G  D A+    ++ ++  P                               
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PNV ++N +   L   G+   A  + S M   G  PD +T+NSLI    + G +DE   L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           + +M  +  +  V++YN +I  FCK  R+  +    AAM  +G   N  T+   ++    
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 487 GGWRAEAMEL 496
            G   EAM+L
Sbjct: 306 EGLVREAMKL 315


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 223/481 (46%), Gaps = 38/481 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ D++   IE M   G + +      LI  F ++ + +KA+++ + ++K G  PDV 
Sbjct: 240 KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVS 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ALI G C   +IE A  +L  ++  G  PD+   + +I   CS  +    +++ ++ 
Sbjct: 300 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-PYCSEEV--DIYRLIEER 356

Query: 168 LRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------------ 202
           L D + +  ++ Y  ++   +     DKA  LL  M                        
Sbjct: 357 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPX 416

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+C  G +  A    R +   GC+ +V+ YN L+  L N  + EE   L+ 
Sbjct: 417 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 476

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM   G  P   T++ +   LCR      A+D++R  +  G  P    Y  L+   CK  
Sbjct: 477 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R   A  FL  M+ +G LPDIV Y+  +  F K    DQALEIF  +   G  P+V +YN
Sbjct: 537 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 596

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ +          A  ++ EM++KG+ P  +TYN LI   C++G +D+A   L  M   
Sbjct: 597 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGK 656

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P VI+Y  +I G C   R +++I +   M  KGC PN  +++ LI G+   GW   A
Sbjct: 657 EREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 716

Query: 494 M 494
           +
Sbjct: 717 L 717



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 221/510 (43%), Gaps = 68/510 (13%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L   + E  F  LI    R  + D++L   + M  +G  PDV +   LI     +++  K
Sbjct: 257 LGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEK 316

Query: 91  AVRVMEILEKYG-EPDV---------------------------------FAYNALISGF 116
           A+ ++  +++ G +PD+                                   YN++++G 
Sbjct: 317 ALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGL 376

Query: 117 CKANQIELANKVLDRLRSRGFS----------------PDVVTYNIMIGSLCSRGMIESA 160
                ++ A  +L  +    ++                P   +++I+I  LC+ G ++ A
Sbjct: 377 VNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLA 436

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----------------- 203
             +F  ++R  CK  V+ Y  LI       + ++   LL EM                  
Sbjct: 437 LSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC 496

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C++  V  A   VR +   G +P +  Y +L++ L    +  E    + EM+  G  P+
Sbjct: 497 LCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPD 556

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +V YS  I    +    + A+++ R    +G  PD  +Y+ LI+ +CK  R+  A + LD
Sbjct: 557 IVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILD 616

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M++ G +P +V YN ++  +CKNG+ DQA     ++      PNV +Y T+   L ++G
Sbjct: 617 EMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAG 676

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A+ + +EM  KG  P+ I++ +LI  LC+ G  D A+    +M   R  P  I Y 
Sbjct: 677 RPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM-GERETPDTIVYV 735

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            +I  F   +    + E+L  M  KG  P+
Sbjct: 736 ALITSFISNKNPTLAFEILKEMVAKGKFPD 765



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 171/374 (45%), Gaps = 20/374 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T F  +I      GK D +L     MV  GCK +V++   LI K     +  +   +++ 
Sbjct: 418 TSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKE 477

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++  G  P  F +N++    C+   +  A  ++  +R  G  P +  Y +++  LC R  
Sbjct: 478 MKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR 537

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              A     +++R+   P ++ Y+  I                   G  K   V QA + 
Sbjct: 538 SAEACNFLAEMVREGFLPDIVAYSAAID------------------GFVKIKAVDQALEI 579

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            R + +RG  PDV++YN L+     + +  E   ++ EM+++GL P+VVTY++LI   C+
Sbjct: 580 FRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCK 639

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  + A   L     K   P+  +Y  LI   C  GR D AI   + M   GC P+ ++
Sbjct: 640 NGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRIS 699

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  ++   CK G  D AL  F ++ +   P  +  Y  + ++  S+ +   A  ++ EM+
Sbjct: 700 FIALIHGLCKCGWPDAALLYFREMGERETPDTIV-YVALITSFISNKNPTLAFEILKEMV 758

Query: 397 SKGIEPDEITYNSL 410
           +KG  PD +  N L
Sbjct: 759 AKGKFPDPLDKNDL 772



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 194/458 (42%), Gaps = 67/458 (14%)

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +R+ E+ +   EPD +   +++  +C + + + A  V + +  RG+  D    +I++ + 
Sbjct: 180 MRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTF 238

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
              G ++ AF++ +++     +    T+ +LI   + + + DKA++L  +M         
Sbjct: 239 SKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDV 298

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDV------------------------- 229
                   G+C K  + +A   +  ++  G  PD+                         
Sbjct: 299 SVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLE 358

Query: 230 --------ISYNMLLRTLLNMGKWEEGEKLMTE----------------MISRGLEPNVV 265
                   + YN +L  L+N    ++   L+                  M+   + P   
Sbjct: 359 DLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTT 418

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           ++SI+I  LC  GK + A+ + R     G   +   Y+ LI       RL+     L  M
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 478

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P    +N+I    C+  +   AL++  ++   G  P +  Y  +   L      
Sbjct: 479 KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRS 538

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A   ++EM+ +G  PD + Y++ I    +   VD+A+ +  D+ +  + P V++YN +
Sbjct: 539 AEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTL 598

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I GFCK +R++E+ ++L  M  KG  P+  TY LLI+G
Sbjct: 599 INGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDG 636



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 199/468 (42%), Gaps = 56/468 (11%)

Query: 105 DVFAYNALISGFCKANQ-IELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFK 162
           + + YNA+ S    A Q   L+   +D + SR   SP        +G++   G I+    
Sbjct: 127 NCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPGA------LGAISKSGSIDLVEM 180

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE----------------MGMCK 206
              ++     +P   T T ++QA     + DKA+ + +E                +   K
Sbjct: 181 RLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSK 240

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G V +AF+ +  +E  G + +  ++ +L+   +   + ++  +L  +M   G  P+V  
Sbjct: 241 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 300

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD---LAIEFLD 323
           Y  LI  LC   + E A+ +L   KE G+ PD      LI  YC +  +D   L  E L+
Sbjct: 301 YDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-PYCSE-EVDIYRLIEERLE 358

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG----------------CPP 367
            + ++  L   + YN++L       + D+A  +   ++                     P
Sbjct: 359 DLDTEAML---LLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRP 415

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
             +S++ +   L ++G    AL +  +M+  G + + + YN+LI  L     ++E   LL
Sbjct: 416 XTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLL 475

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+ + FRPT  ++N I    C+   +  +++++  M   G +P    Y LL++ +   
Sbjct: 476 KEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKR 535

Query: 488 GWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKEI 527
              AEA      +V          ++ + D F ++      L+++++I
Sbjct: 536 KRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 583


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 210/409 (51%), Gaps = 23/409 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-- 100
           +I+   +AG+ D +L  +E+M+  G  PD+   + LI +  +  K  +A   ++ +++  
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439

Query: 101 -YGEPDVFAYNALISGFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIE 158
                  F+YN+L++  CKA ++  A  +   + S R F PDVV+Y+I+I   C    + 
Sbjct: 440 SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELG 499

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K++ Q++  NC P V TY   +   M +G+   A  + +EM                
Sbjct: 500 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM---------------- 543

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
              + GC PDVI+Y+ L+       K ++  +L   MISRG  PN VTY+ L+  LC++ 
Sbjct: 544 --VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKES 601

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K ++A ++ R   E+G  PD  +Y  L+  +C  G+++ A+E  D M+S G  PD+V YN
Sbjct: 602 KPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN 661

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LS 397
            +L  F + G   +A ++F+ +    C P+  S+N M   L  +     A+ +   M   
Sbjct: 662 CLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 721

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            G  PD +TYNSLI  LC +  + EA+ +  +++  +  P   ++N+++
Sbjct: 722 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 230/499 (46%), Gaps = 57/499 (11%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEP-DVFAYNAL 112
           E+     +MV +GCKPD  + + ++    +    ++A ++ +E+  +   P +  A+ A 
Sbjct: 252 EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAF 311

Query: 113 ISGFCKANQIELA--------------NKVLDRL--------------------RSRGFS 138
           +SG CK+ +IE A                V D L                      R   
Sbjct: 312 LSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P   T + +I  LC  G ++SA  + + +++    P + T+++LI       +  +A + 
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 199 LDEM-------------------GMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRT 238
           L  M                    +CK   V QAF    ++ S R   PDV+SY++L+  
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
              + +    EKL  +MI     PNV TY+  ++ L R G+  DA  V       G +PD
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  LI  +    + D A E  + MIS GC P+ V YN +L   CK    D+A E+F 
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+ + GC P+  +Y T+     + G   +A+ +  EM+SKG +PD + YN L+    R G
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTY 477
              EA  L   M S + +P  +S+NI+I G  K +R+++++EV   M +  GC P+  TY
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731

Query: 478 VLLIEGIGYGGWRAEAMEL 496
             LI G+      +EAM++
Sbjct: 732 NSLIFGLCGEQRLSEAMKV 750



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 224/450 (49%), Gaps = 23/450 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    +G+ D++      +     +P    C  +I++  +  + + A+ ++E + K G
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSR--GFSPDVVTYNIMIGSLCSRGMIES 159
             PD+  ++ LI+  CKA++I+ A + L  +  +    S    +YN ++ SLC    +  
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464

Query: 160 AFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           AF +F  ++ +    P V++Y+ILI                   G CK   +G+A +  +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILID------------------GFCKIDELGRAEKLYK 506

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +    C P+V +YN  L  L+  G+  + + +  EM++ G  P+V+TYS LI       
Sbjct: 507 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLAR 566

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K + A ++      +G  P+A +Y+ L+   CK+ + D A E    M+  GC PD V Y 
Sbjct: 567 KHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYT 626

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+L  FC  G  +QA+E+F+++   G  P+V +YN +    + +G    A  +   M+S+
Sbjct: 627 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINE 457
             +PD +++N +I  L +   +D+AV +   ME      P +++YN +I G C  +R++E
Sbjct: 687 QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 746

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           +++V   +      P+   + +L+E I  G
Sbjct: 747 AMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 237/519 (45%), Gaps = 62/519 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L+ +  R     ++    E MVA G  P+      L++    ER S++AVR   E+++K 
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P    Y  +        +    ++V  R   +  + +++    ++ +   +     A 
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------G 203
           K+F  +++  CKP    Y+ ++ A       D+A KL  EM                  G
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSG 314

Query: 204 MCKKGMVGQAFQFVRSLES--RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           +CK G + QAF+  R+++      QP    Y+ML+R L+  G+ ++ E+   E+  R ++
Sbjct: 315 LCKSGKIEQAFEACRTMQESLSSSQP---VYDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  T   +I  LC+ G+ + A+ +L    ++G  PD  ++  LI+  CK  ++  A EF
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 322 LDYM-----------------ISDGC---------------------LPDIVNYNTILAA 343
           L  M                 ++  C                     +PD+V+Y+ ++  
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FCK     +A ++++++ D+ C PNV++YN   + L   G    A G+  EM++ G  PD
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY++LI         D+A  L   M S   RP  ++YN ++ G CK  + +E+ E+  
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M E+GC P+  TY  L+ G    G   +A+E+ + +VS
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVS 650



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 203/487 (41%), Gaps = 90/487 (18%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DVF YN L+    +   ++ A +V +++ ++G  P+  TY +++ S C     + A + F
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 165 DQLLRDNCKPTVITY---TILIQATMLEGQ------TDKAMKLLDEMGMCKKGMVG---- 211
            +++    KP+   Y   T  ++AT  EG+       D   ++  EM + K  +V     
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247

Query: 212 ----QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP-NVVT 266
               +A +  R++   GC+PD   Y+ ++     +   +E  KL  EM      P N V 
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKE---------------------------------- 292
           ++  +S LC+ GK E A +  R  +E                                  
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN---------------- 336
           + + P + +   +I   CK GR+D A+  L+ MI  G  PD+                  
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427

Query: 337 ---------------------YNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNT 374
                                YN++L + CK     QA  IF  + S+    P+V SY+ 
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +        +  RA  +  +M+     P+  TYN+ ++ L R G + +A G+  +M +  
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P VI+Y+ +I GF   R+ +++ E+   M  +GC+PN  TY  L+ G+       EA 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 495 ELANALV 501
           EL   +V
Sbjct: 608 ELFRKMV 614



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 137/273 (50%), Gaps = 20/273 (7%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +   +    R G+  ++    E MVA GC PDV+  + LI  F   RK ++A  + E 
Sbjct: 518 TTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFET 577

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +   G  P+   YN L+ G CK ++ + A+++  ++  RG  PD VTY  ++   C+ G 
Sbjct: 578 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGK 637

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           IE A +VFD+++     P V+ Y  L++                  G  + G  G+A Q 
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLK------------------GFFRAGKPGEAKQL 679

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM-ISRGLEPNVVTYSILISSLC 275
            + + SR C+PD +S+N+++  L    + ++  ++   M    G  P++VTY+ LI  LC
Sbjct: 680 FQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 739

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
            + +  +A+ V +      L+PD ++++ L+ A
Sbjct: 740 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 145/326 (44%), Gaps = 37/326 (11%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+A  F R L++R  + DV +YN LL  L+     ++  ++  +M+++G+ PN  TY++L
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL---ISAYCKDGRL------------ 315
           + S C +  +++AV       +KG  P +  Y  +   + A  K+G              
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 316 -----------------DLAIE---FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                            D AIE       M+  GC PD   Y+ ++ A CK  N D+A +
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 356 IFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           +F +++ +   P N  ++    S L  SG KI         + + +   +  Y+ LI  L
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSG-KIEQAFEACRTMQESLSSSQPVYDMLIRLL 349

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
              G +D+A    +++     +P+  + + +I   CK  R++ ++ +L  M ++G  P+ 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            T+ +LI  +       EA E    +
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGM 435


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 212/438 (48%), Gaps = 18/438 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  DE+L F + M  +G +PDVV    L K F      + A +V++ +   G  PD+  
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI G C+   IE A K+     SRGF  +V+ YN+++  LC  G IE A  +FD++ 
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P  I Y+ILI     EG   +A +L ++M                 G+ K G + 
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  +  +        DV+ YN+++   + +    E  +L  +MI RG+ P+VVT++ LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  CR G   +A  +L   + KGL P   +Y  L++AYC+ G +     FL  M ++  +
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  V Y  ++   C+     ++L++ E +   G  P+  +YNT+        +  +AL +
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            + ML    +P ++TY  LI+ LC  G + +   ++V +E        ++Y  II   C 
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738

Query: 452 TRRINESIEVLAAMFEKG 469
             ++++++     M  KG
Sbjct: 739 KGQVSKALGYFNQMLAKG 756



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 19/446 (4%)

Query: 75  CTK--LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
           CT   LI    ++ K   A+  +    K   P + + N ++S FCK   I++A      +
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLM 297

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
              G   D  +YNI++  LC  G ++ A    D + +   +P V+TY  L +  +L G  
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             A K++ +M                 G C+ G + +A +  +   SRG + +VI YNML
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L  L  +G+ EE   L  EM +  LEP+ + YSILI  LC++G  + A  +    + K  
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P  ++   ++    K+G +  A  + D       + D+V YN ++  + +     +A++
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           ++ K+ + G  P+V ++NT+ +     GD + A  M+  +  KG+ P  +TY +L++  C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G + E    L +ME+    PT ++Y ++I G C+  +++ES+++L  M+ KG  P+  
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  +I+    G    +A++L N ++
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMML 683



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 27/292 (9%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ +M     + +V TY+ L+ ++     T+   DV    K  G      +   LI   C
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +  +L+ AI FL +  +    P IV+ NTI++ FCK G  D A   F  +   G   +  
Sbjct: 249 EQSKLEDAISFL-HDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSF 307

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           SYN +   L  +G    ALG   +M   G+EPD +TYN+L       G++  A  ++  M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P +++Y  +I G C+   I E++++      +G K N   Y +L+  +   G  
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 491 AEAMELANAL-------------VSMHAISRDTF----------KRLNRTFP 519
            EA+ L + +             + +H + ++ F           RL R FP
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFP 479



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 19/193 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LIK   R  K  ESL  +E M A G  PD V    +I+ F + ++  KA+++  
Sbjct: 621 HVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++  +  +P    Y  LI+  C    ++  ++++  +  R  +   VTY  +I + C++G
Sbjct: 681 MMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKG 740

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A   F+Q+L      ++  Y+ +I                    +CK+G++ +A  
Sbjct: 741 QVSKALGYFNQMLAKGFVISIRDYSAVINR------------------LCKRGLITEAKY 782

Query: 216 FVRSLESRGCQPD 228
           F   + S G  PD
Sbjct: 783 FFVMMLSEGVTPD 795


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 218/431 (50%), Gaps = 23/431 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F++L +    AG  ++S+  ++ M  + C         LI  F +   + KA+ V  ++ 
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PD + +N L++ F KA +++   K+ + ++++  SP+V+TY+I+I ++C  G +E
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A KVF  +    C+P + TYT +I      G  DKA  L +EM                
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ + G    A +  R + S+G QPD +++  L+  L   G+  E  ++  E    G  
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA 296

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +V  Y++LI +LC+  + ++A ++    +E GL PD Y+++ L+   CK GR+  A   
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M   GC PD+  YNT++    K+G  ++A ++  ++  +G  P+V +YNT+      
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR----FRP 437
            G    AL +  E+ +KG   + +TYN++++ LC  G VDEA  L   M+         P
Sbjct: 417 GGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDP 475

Query: 438 TVISYNIIILG 448
             ++Y  ++ G
Sbjct: 476 DFVTYTTLLNG 486



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 207/432 (47%), Gaps = 62/432 (14%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN+LI  F KA   + A  V   +   G  PD  T+N+++ +      ++S +K+F+++
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              NC P VITY+ILI A                  +CK G V +A +    ++SRGC+P
Sbjct: 151 QNQNCSPNVITYSILIDA------------------VCKCGGVEKALKVFLDMKSRGCRP 192

Query: 228 DVIS-----------------------------------YNMLLRTLLNMGKWEEGEKLM 252
           ++ +                                   YN L+  L   G+ +   KL 
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM+S+GL+P+ VT++ L+  L   G+  +A  + + A++ G   D   Y+ LI   CK 
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKS 312

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            RLD A E    +  DG +PD+  +N ++   CK+G    A  +   +   GC P+V+ Y
Sbjct: 313 KRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVY 372

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT+   L  SG    A  ++ EM S G EPD +TYN+LI   C+ G +++A+ L  ++ +
Sbjct: 373 NTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISA 432

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC----KPNETTYVLLIEGIGYGG 488
             F  TV +YN I+ G C   R++E+ ++   M ++       P+  TY  L+ G    G
Sbjct: 433 KGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491

Query: 489 WRAEAMELANAL 500
                 ELAN+L
Sbjct: 492 LS----ELANSL 499



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 204/442 (46%), Gaps = 23/442 (5%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG---EPDVFAYNALIS 114
           +F       G  P V  CT L++     R+ N+A  V+  +EK     +P +F    L  
Sbjct: 5   FFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFI--ELAR 62

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+  A  +E + + L R+     +     YN +I +    G  + A  V+  + +   +P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              T+ +L+ A     + D   KL +EM                  +++ C P+VI+Y++
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEM------------------QNQNCSPNVITYSI 164

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+  +   G  E+  K+  +M SRG  PN+ TY+ +I  L + G  + A  +      +G
Sbjct: 165 LIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEG 224

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L      Y+ LI    + GR D A +    M+S G  PD V + +++      G A +A 
Sbjct: 225 LVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEAR 284

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            IF++  DVGC  +V+ YN +   L  S     A  +  E+   G+ PD  T+N+L+  L
Sbjct: 285 RIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGL 344

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G + +A  LL DM+     P V  YN +I G  K+ R+ E+ ++L  M   G +P+ 
Sbjct: 345 CKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDV 404

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY  LI+    GG   +A+ L
Sbjct: 405 VTYNTLIDESCKGGRIEDALRL 426



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 59/284 (20%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI------------KKFFQERK 87
           +  LI    R+G+ D +      M++ G +PD V  T L+            ++ FQE +
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291

Query: 88  SN-----------------KAVRVMEILEKYGE-------PDVFAYNALISGFCKANQIE 123
                              K+ R+ E  E +GE       PDV+ +NAL+ G CK+ +I 
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +L  ++  G +PDV  YN +I  L   G +E A ++  ++     +P V+TY  LI
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
             +   G+ + A++L +E  +  KG                   + ++YN +L  L   G
Sbjct: 412 DESCKGGRIEDALRLFEE--ISAKGF-----------------ANTVTYNTILNGLCMAG 452

Query: 244 KWEEGEKLMT----EMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           + +E  KL      E +   ++P+ VTY+ L++   + G +E A
Sbjct: 453 RVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  LI    ++G+ +E+   +  M + G +PDVV    LI +  +  +   A+R+ E 
Sbjct: 370 TVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEE 429

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG----FSPDVVTYNIMIGSLCS 153
           +   G  +   YN +++G C A +++ A K+ + ++         PD VTY  ++     
Sbjct: 430 ISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489

Query: 154 RGMIESA 160
            G+ E A
Sbjct: 490 AGLSELA 496


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 243/486 (50%), Gaps = 29/486 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   R  +F +++  +  M  N   PDVV    +I+ F + ++  KA+++   ++  G
Sbjct: 148 LLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSG 207

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
               +  +  LI  FCKA +++ A  +L  ++ +G   D++ Y  +I   C  G ++   
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +FD++L     P  ITY  LI+                  G CK G + +A +    + 
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIR------------------GFCKLGRLKEASEIFEFMM 309

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +P+V +Y  L+  L  +GK +E  +L+  M+ +  EPNVVTY+I+I+ LC+D    
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNT 339
           DA++++   K++   PD  +Y+ L+   C  G LD A + L  M+ D     PD++++N 
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK     QAL+I++ L +     ++ + N + ++   SGD  +A+ +  ++ +  
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I P+  TY ++I   C+ GM++ A GLL  M  +   P+V  YN ++   CK   ++++ 
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HA-ISRDTF---KRL 514
            +   M      P+  ++ ++I+G    G    A  L   LV M HA +S D F   K +
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESL---LVGMSHAGLSPDLFTYSKLI 606

Query: 515 NRTFPL 520
           NR   L
Sbjct: 607 NRFLKL 612



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 215/435 (49%), Gaps = 23/435 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ--ERKSNKAVRVMEILEK 100
           LI    +AGK DE++  ++ M   G + D+++ T LI+ F    E    KA+   E+LE+
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL-FDEVLER 276

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P    YN LI GFCK  +++ A+++ + +  RG  P+V TY  +I  LC  G  + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ + +L+ + +P V+TY I+I                    +CK  +V  A + V  +
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINK------------------LCKDSLVADALEIVELM 378

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI--SRGLEPNVVTYSILISSLCRDG 278
           + R  +PD I+YN LL  L   G  +E  KL+  M+  S   +P+V++++ LI  LC+  
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +   A+D+     EK    D  + + L+++  K G ++ A+E    + +   +P+   Y 
Sbjct: 439 RLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYT 498

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FCK G  + A  +  K+     PP+V  YN + S+L   G   +A  +  EM   
Sbjct: 499 TMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRD 558

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              PD I++N +I    + G +  A  LLV M      P + +Y+ +I  F K   ++E+
Sbjct: 559 DSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEA 618

Query: 459 IEVLAAMFEKGCKPN 473
           I     M + G +P+
Sbjct: 619 ISFFDKMIDSGFEPD 633



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 142/284 (50%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF F R +       + +S + LL   + M K      ++  M+ RG   NV  Y+IL+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LCR+ +   AV +LR  ++  L PD  SY+ +I  +C+   L+ A++  + M   GC  
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V +  ++ AFCK G  D+A+ + +++   G   ++  Y ++       G+  R   + 
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+L +G  P  ITYN+LI   C+ G + EA  +   M     RP V +Y  +I G C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +  E++++L  M +K  +PN  TY ++I  +      A+A+E+
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 136/269 (50%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+ TL+     E       +M+      N V+ S L+    +  KT  A  VL    +
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G   + Y+Y+ L+   C++     A+  L  M  +  +PD+V+YNT++  FC+    ++
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL++  ++   GC  ++ ++  +  A   +G    A+G++ EM  KG+E D I Y SLI 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C  G +D    L  ++      P  I+YN +I GFCK  R+ E+ E+   M E+G +P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           N  TY  LI+G+   G   EA++L N ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLML 344



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + KLI R  + G  DE++ F + M+ +G +PD  +C  ++K    + +++K   + E ++
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDK---LTEFVK 658

Query: 100 KYGEPDV 106
           K  + DV
Sbjct: 659 KLVDKDV 665


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 208/427 (48%), Gaps = 28/427 (6%)

Query: 46  RSFRA--------GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           RSFRA        G+F+E+   + +M   G   D   CT +++ F ++ +      +   
Sbjct: 182 RSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGR 241

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           ++E    P+V  Y A + G CK   ++ A  VL+ +  +G  P+V T+  +I  LC  G 
Sbjct: 242 MVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 157 IESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            E AF++F +L++ +  KP V TYT++I                   G CK+G + +A  
Sbjct: 302 TERAFRLFLKLVKSSSYKPNVHTYTVMIG------------------GYCKEGKLARAEM 343

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  +G  P+  +Y  L+      G ++   +LM +M   G  PN+ TY+ +I   C
Sbjct: 344 LLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFC 403

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK + A  VLR A  +GL PD  +Y  LI+ +CK G +  A++  + M  + C PDI 
Sbjct: 404 KKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDID 463

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y TI+A +C+    +Q+ ++F+K   +G  P   +Y +M +     G    AL +   M
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G  PD ITY +LIS LC++  ++EA  L   M      P  ++   +   +C+  + 
Sbjct: 524 VQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKT 583

Query: 456 NESIEVL 462
             ++  L
Sbjct: 584 TIAVSFL 590



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 194/408 (47%), Gaps = 19/408 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PD  ++ AL+ G C+  + E A+ +L  +   GFS D  T  +++ + C +G       
Sbjct: 178 RPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPG 237

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F +++     P V+ YT  +                   G+CK+G V QAF  +  +  
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVD------------------GLCKRGYVKQAFHVLEEMVG 279

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTE 281
           +G +P+V ++  L+  L  +G  E   +L  +++ S   +PNV TY+++I   C++GK  
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +L    E+GL P+  +Y  LI  +C+ G  D A E ++ M  +G LP+I  YN I+
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FCK G   QA ++    +  G  P+  +Y  + +     G    AL + ++M      
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD  TY ++I+  C+   ++++  L     S    PT  +Y  +I G+C+  +   +++V
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
              M + GC P+  TY  LI G+       EA  L   ++  H +  D
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCD 567



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 148/328 (45%), Gaps = 16/328 (4%)

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            +G+ ++     A Q   + +  G +PD  S+  L+      G++EE + L+  M   G 
Sbjct: 156 RVGLRQRHHFAHARQ---AFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGF 212

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             +  T ++++ + CR G+  D   +     E G  P+  +Y   +   CK G +  A  
Sbjct: 213 SLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFH 272

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSAL 379
            L+ M+  G  P++  + +++   CK G  ++A  +F KL       PNV +Y  M    
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G   RA  ++  M+ +G+ P+  TY +LI   CR G  D A  L+  M+   F P +
Sbjct: 333 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNI 392

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            +YN II GFCK  +I ++ +VL     +G  P++ TY +LI      G    A++L N 
Sbjct: 393 YTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQ 452

Query: 500 LVSMHAISRDTFKRLNRTFPLLDVYKEI 527
           +              N   P +D Y  I
Sbjct: 453 MAE------------NSCHPDIDTYTTI 468



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 177/428 (41%), Gaps = 61/428 (14%)

Query: 43  LIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           ++ R+F R G+F +       MV  G  P+VV  T  +    +     +A  V+E +   
Sbjct: 221 VVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGK 280

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIES 159
           G +P+V+ + +LI G CK    E A ++  +L +S  + P+V TY +MIG  C  G +  
Sbjct: 281 GLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR 340

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A  +  +++     P   TYT LI      G  D+A +L+++M                 
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM------- 255
           G CKKG + QA++ +R   S+G  PD ++Y ML+      G       L  +M       
Sbjct: 401 GFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHP 460

Query: 256 ----------------------------ISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
                                       +S GL P   TY+ +I+  CR GK+  A+ V 
Sbjct: 461 DIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVF 520

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               + G  PD  +Y  LIS  CK+ RL+ A    + M+    +P  V   T+   +C+ 
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRR 580

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM-ISEMLSKGIEPDEIT 406
                A+   + L          +     SA+    D + A  + +  +L K    D  T
Sbjct: 581 DKTTIAVSFLDGLDKRQQAHAADALVRKLSAV----DNLDAASLFLKNVLDKHYAVDHAT 636

Query: 407 YNSLI-SC 413
           Y S I SC
Sbjct: 637 YTSFINSC 644



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 131/323 (40%), Gaps = 22/323 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G FD +   +  M   G  P++     +I  F ++ K  +A +V+ +  
Sbjct: 360 YTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMAT 419

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD   Y  LI+  CK   I  A  + +++      PD+ TY  +I   C +  +E
Sbjct: 420 SQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQME 479

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            + ++FD+ L     PT  TYT +I                   G C+ G    A +   
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIA------------------GYCRVGKSTSALKVFE 521

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC PD I+Y  L+  L    + EE   L   M+ + + P  VT   L    CR  
Sbjct: 522 RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRD 581

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           KT  AV  L    ++     A++ D L+        LD A  FL  ++      D   Y 
Sbjct: 582 KTTIAVSFLDGLDKR---QQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYT 638

Query: 339 TILAAFCKNGNADQALEIFEKLS 361
           + + +  ++     A EI EK+S
Sbjct: 639 SFINSCYESNRYALASEISEKIS 661


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 216/445 (48%), Gaps = 19/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-L 98
           F  LI    + G  D++    + M  NG  PD+++ + LI   F+  +     R++ + L
Sbjct: 310 FSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVAL 369

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  + DV  +++ +  + K   +    ++  R+ + G SP+VV+ +I+I   C  G I 
Sbjct: 370 DKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRIL 429

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +F Q+L+   +P+++TY+ LI                   G CK G +   F    
Sbjct: 430 EACGLFVQILKLGFEPSILTYSALIA------------------GFCKSGNLRDGFYLYE 471

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  + C+PD I Y++L+  L   G   +  +   + ++RGL PNV T + L+ S CR  
Sbjct: 472 DMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLK 531

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
               A+ V        +  D  +Y  LI    + GR+D A+     M+     PD++ Y 
Sbjct: 532 CIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYC 591

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   CK   +   L IF+ +      P+++ YN + +     G    ALG+   ++ +
Sbjct: 592 TLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVER 651

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G +PD  T+N++I C C    +D+AV L   M S + RP  I++ I+I  FC+  R++++
Sbjct: 652 GPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDA 711

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG 483
           + + + M E+G +PN  TY  LI G
Sbjct: 712 MLMFSKMLEEGPEPNLVTYSCLIHG 736



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 221/470 (47%), Gaps = 18/470 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++ R    G+ +  L F +++V  G   D++ C K++K  + +     A     ++ + G
Sbjct: 243 VMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIG 302

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  ++ LI  +CK   ++ A  + D +   G +PD++ Y+I+I  L   G +E   
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++    L    K  V+ ++  + A +  G   + +++   M                 G 
Sbjct: 363 RLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGF 422

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + +A      +   G +P +++Y+ L+      G   +G  L  +MI +  EP+ 
Sbjct: 423 CQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDT 482

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           + YS+LI+ LC+ G   DA+     A  +GL+P+ ++ + L+ ++C+   +  A++    
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M       D V Y  ++    + G  D+AL +F ++      P+V +Y T+   L     
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
               L +   M    + PD   YN LI+   R+G ++ A+GL V +     +P V ++N 
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           +I  +C  +R+++++++ A M  +  +PN  T+ +LI+     G   +AM
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAM 712



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 204/481 (42%), Gaps = 66/481 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+   R G FD+S+     +  + C   + +   ++         +  V V  I++KYG
Sbjct: 173 LIESYCRKGMFDKSV----DIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEV--IVDKYG 226

Query: 103 E-------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E            Y  +++ F    ++E+  +    L   GF  D++T N ++  +  + 
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I  A   F+ ++R   KP V+T++ LI A   EG  DKA  L D M             
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMA------------ 334

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM----------------------- 252
                   G  PD+I Y++L+  L   G+ E+G++L+                       
Sbjct: 335 ------GNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYV 388

Query: 253 ------------TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
                         M++ G+ PNVV+ SILI   C++G+  +A  +     + G  P   
Sbjct: 389 KIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSIL 448

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI+ +CK G L       + MI   C PD + Y+ ++   CK G    AL  F + 
Sbjct: 449 TYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQA 508

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + G  PNV + NT+  +       + A+ +   M    I+ D +TY  LI    + G V
Sbjct: 509 VNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRV 568

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           DEA+ L   M    F+P VI+Y  +I G CK ++ +  + +   M +    P+   Y +L
Sbjct: 569 DEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVL 628

Query: 481 I 481
           I
Sbjct: 629 I 629



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 23/401 (5%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F+     +  LI    ++G   +  Y  E M+   C+PD ++ + LI    ++     
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+R   + + +   P+VF  N L+  FC+   I  A KV   +       D VTY I+I 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK--- 206
                G ++ A  +F Q+L+ + KP VITY  LI       ++   + + D M  CK   
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFM--CKNAV 618

Query: 207 ----------------KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                           +G +  A      +  RG +PDV ++N ++    N  + ++  +
Sbjct: 619 APDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQ 678

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L  +M S  L PN +T++ILI + CR+G+ +DA+ +     E+G  P+  +Y  LI  Y 
Sbjct: 679 LFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYF 738

Query: 311 K-DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           K    ++  ++  + M+ +   P+IV+Y+ ++   CK G   +A   F    D    P+V
Sbjct: 739 KSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDV 798

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +Y  +       G    A+ +   ML   + PD     +L
Sbjct: 799 IAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           +L+       +  LIK + + G+ DE+L     M+    KPDV+    LI    + +KS+
Sbjct: 545 MLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
             + + + + K    PD+  YN LI+   +   +E A  +   +  RG  PDV T+N MI
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
              C+   ++ A ++F ++  +  +P  IT+TILI A   EG+ D AM +  +M      
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKM------ 718

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTY 267
                      LE  G +P++++Y+ L+     +    E G KL  EM+   + PN+V+Y
Sbjct: 719 -----------LE-EGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSY 766

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           SILI  LC+ G  ++A    R A +K L PD  +Y  LI  YCK GRL  A+   D M+ 
Sbjct: 767 SILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLL 826

Query: 328 DGCLPD 333
           +   PD
Sbjct: 827 NRLTPD 832



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 189/408 (46%), Gaps = 21/408 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGF--SPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            Y  LI  +C+    + +  +   +  +G   SP+VV   +++GSL     +E     + 
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY--LLLGSLIDSHCVEVIVDKYG 226

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           +L     +     Y  ++   M +G+ +  ++    +                 G+  + 
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            +G A  +   +   G +P+V++++ L+      G  ++   L   M   G+ P+++ YS
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ILI  L + G+ ED   +L  A +KG+  D   +   + AY K G L   I+    M+++
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V+ + ++  FC+NG   +A  +F ++  +G  P++ +Y+ + +    SG+    
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  +M+ K  EPD I Y+ LI+ LC+ G+V +A+       +    P V + N ++  
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           FC+ + I  +++V   M     K +  TY +LI+G    G   EA+ L
Sbjct: 527 FCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 17/358 (4%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDN--CKPTVITYTI--LIQATMLEGQTDKAMK 197
           V Y  +I S C +GM + +  +F  +        P V+   +  LI +  +E   DK  +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 198 LLDEM-------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           L   M                 KG V    +F ++L   G   D+I+ N +L+ +     
Sbjct: 228 LCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQND 287

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
               +     ++  G +PNVVT+S LI + C++G  + A  +       G+TPD   Y  
Sbjct: 288 IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSI 347

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI    K GRL+     L   +  G   D+V +++ + A+ K G+  + ++I++++ + G
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG 407

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             PNV S + +      +G  + A G+  ++L  G EP  +TY++LI+  C+ G + +  
Sbjct: 408 ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGF 467

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            L  DM   R  P  I Y+++I G CK   + +++        +G  PN  T   L++
Sbjct: 468 YLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 189/400 (47%), Gaps = 18/400 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            +YN L+    K+ + +      + + + G  P+  TY  ++ SLC     E A  VF  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +    C P V +Y+ILI       + D+A +LL+EM                     G Q
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM------------------IDGGHQ 119

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++Y  LL  L  MGK +E   L + M+ RG  P+ V Y++LI    + G   +A  +
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                EKG  P  ++Y+ L+S + + G           M+  GC+P+I  +N +L  FCK
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G+  +A  +F ++  +GCPP+V SYNT+   + S G    A  ++ EM+  G+ PD ++
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI    + G +D A+ L  ++  +   P   SY+ II   C+  ++  +  V   M 
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             G  P+    + L+ G+  G    E+ EL  A+V    +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 211/434 (48%), Gaps = 20/434 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+ D        M+A GC P+      L++   Q ++  +A  V   +   G  P+VF
Sbjct: 29  KSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y+ LI+G C+  +++ A ++L+ +   G  P+VVTY  ++  LC  G ++ A  +F ++
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +   C P  + Y +LI                   G  KKG +G+A++    +  +GC P
Sbjct: 149 VYRGCPPDGVVYNVLID------------------GFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V +YN LL      G++   + L  +M+ +G  PN+ T++ L+   C+ G   +A  + 
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G  PD  SY+ LI   C  G+   A   L  MI  G  PDIV+YN ++  + K+
Sbjct: 251 LEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D A+++F ++   G  P+  SY+T+   L  +G    A  +  +M++ G  PD    
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVV 370

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             L+  LCR   + E+  L   M      P +  YN+++   CK +R ++  E+   + E
Sbjct: 371 IPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 468 KGCKPN-ETTYVLL 480
           +G  P+ E + V+L
Sbjct: 431 RGFSPDVEISKVIL 444



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 27/401 (6%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           +A   PNT+   +         L++   +A +F+E+      M A GC P+V   + LI 
Sbjct: 45  AAGCVPNTYTYGY---------LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIA 95

Query: 81  KFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              + +K ++A  ++ E+++   +P+V  Y +L+SG CK  +++ A  +  R+  RG  P
Sbjct: 96  GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D V YN++I     +G +  A+++F+++L   C PTV TY  L+     +G+  +   L 
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
            +M                 G CK G + +A +    + S GC PDV+SYN L+R + + 
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK 275

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           GK  E ++L+ EMI  G+ P++V+Y+ILI    + G  + A+ +     + GL PDA+SY
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             +I   C+ G++  A      MI++G  PD      ++   C+     ++ E+F+ +  
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             C P +  YN +   L  +        +  E+  +G  PD
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 178/346 (51%), Gaps = 18/346 (5%)

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           ++   ++YN ++  L   G  +  +  ++ +L   C P   TY  L+++           
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS----------- 61

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                  +C+     +A    R + ++GC P+V SY++L+  L    K +E  +L+ EMI
Sbjct: 62  -------LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G +PNVVTY  L+S LC+ GK ++AVD+      +G  PD   Y+ LI  + K G + 
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A    + M+  GC+P +  YN++L+ F + G   +   +F+ +   GC PN+ ++N + 
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                 GD + A  +  EM S G  PD ++YN+LI  +C  G   EA  LL +M  +   
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           P ++SYNI+I G+ K+  ++ +I++   + + G +P+  +Y  +I+
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 206/443 (46%), Gaps = 36/443 (8%)

Query: 58  YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFC 117
           Y + S+V N   P V+    L KKF    +SN A            PD+   N L++ FC
Sbjct: 68  YILSSLVNNKHYPTVI---SLFKKF----ESNGAT-----------PDLCTLNILMNCFC 109

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               I  A  VL  +  RG+ P+ +T N +I  LC RG I+ A    DQ++    +   +
Sbjct: 110 HLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQV 169

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y  LI                   G+CK G      + +R LE    +PDV+ YN ++ 
Sbjct: 170 SYRTLIN------------------GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIH 211

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           +L       +   L +EMI +G+ PNVVTY+ L+   C  G  ++A  +L   K K + P
Sbjct: 212 SLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINP 271

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  +++ LI A  K+G++  A   L  M+     PD+V YN+++  +        A  +F
Sbjct: 272 DVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVF 331

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             ++  G  PNV +Y TM   L        A+ +  EM  K + PD +TY SLI  LC++
Sbjct: 332 YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN 391

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             ++ A+ L   M+    +P V SY I++   CK  R+  + E    +  KG   N  TY
Sbjct: 392 HHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTY 451

Query: 478 VLLIEGIGYGGWRAEAMELANAL 500
            ++I G+       EAM+L + +
Sbjct: 452 NVMINGLCKADLFGEAMDLKSKM 474



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 217/470 (46%), Gaps = 42/470 (8%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   E+   +  M      PDV     LI    +E K   A  V+ ++ K   +PDV  Y
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+LI G+   N+++ A  V   +   G +P+V TY  MI  LC   M++ A  +F+++  
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            N  P ++TYT LI                   G+CK   + +A    + ++ +G QPDV
Sbjct: 372 KNMIPDIVTYTSLID------------------GLCKNHHLERAIALCKKMKEQGIQPDV 413

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            SY +LL  L   G+ E  ++    ++ +G   NV TY+++I+ LC+     +A+D+   
Sbjct: 414 YSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-------------------- 329
            + KG  PDA ++  +I A  +    D A + L  MI+ G                    
Sbjct: 474 MEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMT 533

Query: 330 --CL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             C+ PD+V Y T++  +        A  +F  ++ +G  PNV  Y  M   L       
Sbjct: 534 KACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVD 593

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ +  EM  K + P+ +TY SLI  LC++  ++ A+ LL +M+    +P V SY I++
Sbjct: 594 EAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 653

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G CK+ R+  + E+   +  KG   N   Y  +I  +   G   EA++L
Sbjct: 654 DGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 238/535 (44%), Gaps = 76/535 (14%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G+  ++LYF + +VA G + + V    LI    +  ++    R++  LE + 
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHS 198

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  YN +I   CK   +  A  +   +  +G SP+VVTYN ++   C  G ++ AF
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD-EMGMCKK------------- 207
            + +++   N  P V T+  LI A   EG+   A  +L   M  C K             
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318

Query: 208 ---GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                V  A     S+   G  P+V +Y  ++  L      +E   L  EM  + + P++
Sbjct: 319 FFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI 378

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI  LC++   E A+ + +  KE+G+ PD YSY  L+ A CK GRL+ A EF   
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G   ++  YN ++   CK     +A+++  K+   GC P+  ++ T+  AL+   +
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498

Query: 385 KIRALGMISEMLSKG-----------------------IEPDEITYNSL----------- 410
             +A  ++ EM+++G                       I+PD +TY +L           
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 411 ------------------------ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
                                   I  LC+   VDEA+ L  +M+     P +++Y  +I
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              CK   +  +I +L  M E G +P+  +Y +L++G+   G    A E+   L+
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 215/452 (47%), Gaps = 44/452 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   F   K   + Y   SM  +G  P+V   T +I    +E+  ++A+ + E + KY 
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM-KYK 372

Query: 103 E--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              PD+  Y +LI G CK + +E A  +  +++ +G  PDV +Y I++ +LC  G +E+A
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 432

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            + F +LL       V TY ++I                   G+CK  + G+A      +
Sbjct: 433 KEFFQRLLVKGYHLNVQTYNVMIN------------------GLCKADLFGEAMDLKSKM 474

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE------------------- 261
           E +GC PD I++  ++  L    + ++ EK++ EMI+RGL+                   
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 262 ----PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
               P+VVTY  L+       + + A  V  +  + G+TP+   Y  +I   CK   +D 
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+   + M      P+IV Y +++ A CKN + ++A+ + +++ + G  P+V SY  +  
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  SG    A  +   +L KG   +   Y ++I+ LC+ G+ DEA+ L   ME     P
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
             ++++III    +    +++ ++L  M  +G
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 197/431 (45%), Gaps = 19/431 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P  F +N ++S             +  +  S G +PD+ T NI++   C    I  AF V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              +L+    P  IT   LI+                  G+C +G + +A  F   + ++
Sbjct: 121 LANILKRGYHPNAITLNTLIK------------------GLCFRGEIKKALYFHDQVVAQ 162

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G Q + +SY  L+  L   G+ +   +L+ ++    ++P+VV Y+ +I SLC++    DA
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA 222

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            D+      KG++P+  +Y+ L+  +C  G L  A   L+ M      PD+  +NT++ A
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             K G    A  +   +      P+V +YN++    +       A  +   M   G+ P+
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TY ++I  LC++ MVDEA+ L  +M+     P +++Y  +I G CK   +  +I +  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAME-LANALVSMHAISRDTFKRLNRTFPLLD 522
            M E+G +P+  +Y +L++ +  GG    A E     LV  + ++  T+  +       D
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462

Query: 523 VYKEISHLATK 533
           ++ E   L +K
Sbjct: 463 LFGEAMDLKSK 473



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 206/453 (45%), Gaps = 46/453 (10%)

Query: 59  FIESMVAN----GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           F  S++AN    G  P+ +    LIK      +  KA+   + +   G + +  +Y  LI
Sbjct: 116 FAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLI 175

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           +G CK  + +   ++L +L      PDVV YN +I SLC   ++  A  ++ +++     
Sbjct: 176 NGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGIS 235

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V+TY  L+                   G C  G + +AF  +  ++ +   PDV ++N
Sbjct: 236 PNVVTYNALVY------------------GFCIMGHLKEAFSLLNEMKLKNINPDVCTFN 277

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L+  L   GK +  + ++  M+   ++P+VVTY+ LI       K ++A  V  +  + 
Sbjct: 278 TLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS 337

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+TP+  +Y  +I   CK+  +D A+   + M     +PDIV Y +++   CKN + ++A
Sbjct: 338 GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           + + +K+ + G  P+V SY  +  AL   G    A      +L KG   +  TYN +I+ 
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF-----------------------C 450
           LC+  +  EA+ L   ME     P  I++  II                           
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEA 517

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +  R+ E+  VLA M +   KP+  TY  L++G
Sbjct: 518 RKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 193/389 (49%), Gaps = 43/389 (11%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           DE++   E M      PD+V  T LI    +     +A+ + + +++ G +PDV++Y  L
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +   CK  ++E A +   RL  +G+  +V TYN+MI  LC   +   A  +  ++    C
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM---GM--CKKGMVGQAFQFVRSLESRGC-Q 226
            P  IT+  +I A   + + DKA K+L EM   G+   +K  + +A + V ++ ++ C +
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA-KIVLAVMTKACIK 538

Query: 227 PDVISYNMLL----------------RTLLNMG-------------------KWEEGEKL 251
           PDV++Y  L+                 ++  MG                     +E   L
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM  + + PN+VTY+ LI +LC++   E A+ +L+  KE G+ PD YSY  L+   CK
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            GRL+ A E    ++  G   ++  Y  ++   CK G  D+AL++  K+ D GC P+  +
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGI 400
           ++ +  AL+   +  +A  ++ EM+++G+
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 42/309 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG------ 102
           +A  F E++     M   GC PD +    +I   F++ +++KA +++  +   G      
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519

Query: 103 ------------------EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
                             +PDV  Y  L+ G+   N+++ A  V   +   G +P+V  Y
Sbjct: 520 VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCY 579

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
            IMI  LC +  ++ A  +F+++   N  P ++TYT LI A                  +
Sbjct: 580 TIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDA------------------L 621

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK   + +A   ++ ++  G QPDV SY +LL  L   G+ E  +++   ++ +G   NV
Sbjct: 622 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ +I+ LC+ G  ++A+D+    ++KG  PDA ++D +I A  +    D A + L  
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 325 MISDGCLPD 333
           MI+ G + +
Sbjct: 742 MIARGLMKE 750



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+   D M+     P   ++N IL++   N +    + +F+K    G  P++ + N + +
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                     A  +++ +L +G  P+ IT N+LI  LC  G + +A+     + +  F+ 
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 438 TVISYNIIILGFCKT-----------------------------------RRINESIEVL 462
             +SY  +I G CKT                                   + + ++ ++ 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + M  KG  PN  TY  L+ G    G   EA  L N +
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM 264



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 51/115 (44%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+     ML     P    +N ++S L  +      + L    ES    P + + NI++ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            FC    I  +  VLA + ++G  PN  T   LI+G+ + G   +A+   + +V+
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVA 161


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 226/485 (46%), Gaps = 28/485 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           P+      +I   ++  +   AV V  E+ E+   P+   YN +I G  K   +E   ++
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
            D++   G  P+ +TYN+++  LC  G +     + D++      P   TY+IL      
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G +   + L  +                  G+CK G V  A + ++SL + G  P  + 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+      G+ E       +M SR ++P+ +TY+ LI+ LC+  +  +A D+L   +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + G+ P   +++ LI AY + G+L+     L  M  +G  P++V+Y +I+ AFCKNG   
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ I + +      PN   YN +  A    G   +A  ++ +M S GI P  +TYN LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC    + EA  ++  + + R  P  +SYN +I   C    I++++++   M + G K
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 472 PNETTYVLLIEGIGYGGWRAEAME------LANALV---SMHAISRDTFKRLNRTFPLLD 522
               TY  LI G+G G  R   ME      + N +V   ++H I  + + +        D
Sbjct: 433 STVRTYHQLISGLG-GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 491

Query: 523 VYKEI 527
           + KE+
Sbjct: 492 LRKEM 496



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 18/486 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   +RAG+  +++   + M      P+ +    +I    +        R+ + +  +G
Sbjct: 21  VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 80

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN L+SG C+A ++   + +LD + S+   PD  TY+I+   L   G  ++  
Sbjct: 81  LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 140

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +F + L++       T +IL+     +G+   A ++L  +                 G 
Sbjct: 141 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 200

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G +  AF     ++SR  +PD I+YN L+  L    +    + L+ EM   G+ P V
Sbjct: 201 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 260

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T++ LI +  R G+ E    VL   +E GL P+  SY  +++A+CK+G++  A+  LD 
Sbjct: 261 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     LP+   YN I+ A+ ++G  DQA  + EK+   G  P++ +YN +   L +   
Sbjct: 321 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 380

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I+ + +  + PD ++YN+LIS  C  G +D+A+ L   M     + TV +Y+ 
Sbjct: 381 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 440

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +I G     R+NE   +   M +    P+   + +++E     G   +A +L   ++   
Sbjct: 441 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500

Query: 505 AISRDT 510
               DT
Sbjct: 501 NNHDDT 506



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    R G+ ++    +  M  NG KP+VV    ++  F +  K  +AV ++ ++ 
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+   YNA+I  + +    + A  ++++++S G SP +VTYN++I  LC++  I 
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ + L      P  ++Y  LI A    G  DKA+ L   M                
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM---------------- 426

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G +  V +Y+ L+  L   G+  E E L  +M+   + P+   ++I++ +  + G
Sbjct: 427 --HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484

Query: 279 KTEDAVDVLRAAKEK 293
               A D+ +   +K
Sbjct: 485 NEIKAEDLRKEMLQK 499



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 35/232 (15%)

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  ++    P+A+SY+ +I+   + GR   A+E  D M     LP+ + YNT++    K 
Sbjct: 4   RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 63

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ +    + +++   G  PN  +YN + S L  +G       ++ EM S+ + PD  TY
Sbjct: 64  GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 408 -----------------------------------NSLISCLCRDGMVDEAVGLLVDMES 432
                                              + L++ LC+DG V  A  +L  + +
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               PT + YN +I G+C+T  +  +      M  +  KP+  TY  LI G+
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%)

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D   PPN  SYN + + +W +G    A+ +  EM  + + P+ ITYN++I    + G ++
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
               L   M     +P  I+YN+++ G C+  R+ E+  +L  M  +   P+  TY +L 
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 482 EGIGYGG 488
           +G+   G
Sbjct: 128 DGLSRNG 134


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 236/498 (47%), Gaps = 22/498 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L  +V    F  LI       K  E++  I  M    C PD V    ++    ++ K N+
Sbjct: 42  LGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNE 101

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  ++  ++  G  P+   +N L+SG+CK   ++ A +V+D +      PDV TY  +IG
Sbjct: 102 ARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIG 161

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
            LC  G I+ AF++ D++      P V+TY +LI        + K  +L+DEM       
Sbjct: 162 GLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKP 221

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                        K+G +  A   +R +E  G  PD +++N L       G+  E  ++M
Sbjct: 222 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMM 281

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  +GL+ N VT + ++ +LC + K +DA  +L +A ++G   D  SY  LI  Y K 
Sbjct: 282 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKV 341

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+        D M     +P I+ Y T++   C++G  DQ+++   +L + G  P+ ++Y
Sbjct: 342 GK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTY 397

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           NT+       G   +A    ++M+ K  +PD  T N L+  LC +GM+D+A+ L     S
Sbjct: 398 NTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWIS 457

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                  +++N II G C+  R  E+ ++LA M EK   P+  T+  ++  +   G   E
Sbjct: 458 KGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKE 517

Query: 493 AMELANALVSMHAISRDT 510
           A E  + +V    +   T
Sbjct: 518 AEEFMSGIVEQGKLQDQT 535



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 231/510 (45%), Gaps = 76/510 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + GK +E+   +  M  NG  P+      L+  + +     +A  V++I+ +    PDV 
Sbjct: 95  KKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVR 154

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL--CSRGMIESAFKVFD 165
            Y  LI G CK  +I+ A ++ D + +    P VVTYN++I     CS  +    F++ D
Sbjct: 155 TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSL--KGFELID 212

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++     KP  +TY ++++  + EG+ D A   L +M                 G CK G
Sbjct: 213 EMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAG 272

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG--------- 259
            + +AF+ +  +  +G + + ++ N +L TL    K ++  KL++    RG         
Sbjct: 273 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 332

Query: 260 ----------------------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                                 + P+++TY  +I  LCR GKT+ ++D      E GL P
Sbjct: 333 TLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVP 392

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  +Y+ +I  YC++G++D A  F + M+     PD+   N ++   C  G  D+AL++F
Sbjct: 393 DQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLF 452

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           +     G   +  ++NT+ S L   G    A  +++EM  K + PD  T+N+++S L   
Sbjct: 453 KTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADA 512

Query: 418 GMVDEA---------VGLLVDMESTRFR--------------PTVISYNIIILGFCKTRR 454
           G + EA          G L D   +  +              P  ++++  I   C   +
Sbjct: 513 GRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGK 572

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             +++ ++    +KG   +++TY+ L+EG+
Sbjct: 573 YKDAMHMIQESTQKGIILHKSTYISLMEGL 602



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 69/460 (15%)

Query: 7   CINPKSNERVRVSSSAET-RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVA 65
           C + K +E  R+    E  +   H++++++       LI   F      +    I+ M  
Sbjct: 164 CKDGKIDEAFRLRDEMENLKLLPHVVTYNM-------LINGCFECSSSLKGFELIDEMEG 216

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIEL 124
            G KP+ V    ++K + +E K + A   +  +E+ G  PD   +N L +G+CKA ++  
Sbjct: 217 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSE 276

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV--------------------- 163
           A +++D +  +G   + VT N ++ +LC    ++ A+K+                     
Sbjct: 277 AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 336

Query: 164 ----------FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
                     +D++      P++ITY  +I      G+TD+++   +E+           
Sbjct: 337 GYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTT 396

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G C++G V +AF F   +  +  +PD+ + N+L+R L   G  ++  KL    I
Sbjct: 397 YNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWI 456

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+G   + VT++ +IS LC +G+ E+A D+L   +EK L PD Y+++ ++SA    GR+ 
Sbjct: 457 SKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMK 516

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A EF+  ++  G L D             N    ++     + SD    PN  +++   
Sbjct: 517 EAEEFMSGIVEQGKLQD--------QTISLNKRKTESSSETSQESD----PNSVAFSEQI 564

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           + L + G    A+ MI E   KGI   + TY SL+  L +
Sbjct: 565 NELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 185/434 (42%), Gaps = 87/434 (20%)

Query: 137 FSPDVVTYNIMIGSLC---SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             P+++T N +I +L    S+  +  +  +F  +++   +    T+ ILI    +E +  
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
           +A+           G++G+   F        C PD +SYN +L  L   GK  E   L+ 
Sbjct: 66  EAI-----------GLIGKMKHF-------SCFPDNVSYNTILDVLCKKGKLNEARDLLL 107

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M + GL PN  T++IL+S  C+ G  ++A +V+       + PD  +Y  LI   CKDG
Sbjct: 108 DMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDG 167

Query: 314 RLDLA-----------------------------------IEFLDYMISDGCLPDIVNYN 338
           ++D A                                    E +D M   G  P+ V YN
Sbjct: 168 KIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYN 227

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  + K G  D A     K+ + G  P+  ++NT+ +    +G    A  M+ EM  K
Sbjct: 228 VVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRK 287

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLV------------------------------ 428
           G++ + +T N+++  LC +  +D+A  LL                               
Sbjct: 288 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXW 347

Query: 429 -DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+     P++I+Y  +I G C++ + ++SI+    + E G  P++TTY  +I G    
Sbjct: 348 DEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCRE 407

Query: 488 GWRAEAMELANALV 501
           G   +A    N +V
Sbjct: 408 GQVDKAFHFRNKMV 421


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 223/464 (48%), Gaps = 26/464 (5%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P       +I+   +     +A+R + ++ + G  PD + +N+LI G+C+ NQ+++A  +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
            D++  RGF+ DVV+Y  +I  LC  G I+ A ++F ++     +P +  Y  L++    
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCN 266

Query: 189 EGQTDKAMKLL---DEMGM--------------CKKGMVGQAFQFVRSLESRGCQPDVIS 231
             + ++ + +L    E+G               C++    +A + ++ +  +G  P V++
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
              ++      G+  +  +++  M  RG +PNV TY+ L+   C +GK   A+ +L   +
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G+ PDA +Y+ LI   C DG ++ A   L  M  DG + D   YN ++ A CK+G  D
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           QA  +F+ L   G  PN  ++N++ + L  SG    A   + +M+S G  PD  TY+S I
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+     E +  + +M     +P+ ++Y I+I    K R           M   GC 
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 472 PNETTYVLLIEGIGYGGWRAEA----MELANALVSMHAISRDTF 511
           P+  TY   +      G   EA    ME++   V++  ++ +T 
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 610



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 193/396 (48%), Gaps = 24/396 (6%)

Query: 91  AVRVMEILEKYGEPDVFA--YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           A+R+   + ++  P   A  YNA+I   C+   +  A + L  +   G+ PD  T+N +I
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
              C    ++ A  +FD++        V++Y  LI+     G+ D+A++L  EM      
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----- 250

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                            QPD+  Y  L++ L N  + EEG  ++  M   G  P+   Y+
Sbjct: 251 -----------------QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYA 293

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++   CR+ K ++A ++L+   EKGL P   +   +I+AYCK+GR+  A+  L+ M   
Sbjct: 294 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 353

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC P++  YN ++  FC  G   +A+ +  K+   G  P+  +YN +       G    A
Sbjct: 354 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             ++  M   G+  D+ TYN+LI+ LC+DG  D+A  L   +E+   +P  +++N +I G
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            CK+ + + + + L  M   GC P+  TY   IE +
Sbjct: 474 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 239/542 (44%), Gaps = 71/542 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K  E+   ++ M   G  P VV CT +I  + +E + + A+RV+E+++  G +P+V+
Sbjct: 301 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 360

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNAL+ GFC   ++  A  +L+++R+ G +PD VTYN++I   C  G IESAF++   +
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             D       TY  LI A   +G+TD+A  L D +                 G+CK G  
Sbjct: 421 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG---------------------- 248
             A++F+  + S GC PD  +Y+  +  L  M   +EG                      
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 540

Query: 249 -EKLMTE------------MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
             KL+ E            M+S G  P+VVTY+  + + C +G+  +A +VL    + G+
Sbjct: 541 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 600

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL-------------- 341
           T D  +Y+ L+  +   G+ D A+  L  M S   +P+   Y  +L              
Sbjct: 601 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 660

Query: 342 ---AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
              A   K         +F+ +      PN  +Y+++       G    A  ++S M   
Sbjct: 661 LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED 720

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I  +E  Y +L++C C+     +A  L+  M    F P ++SY  ++ G     + +++
Sbjct: 721 SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA 780

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA-ISRDTFKRLNRT 517
            E+      K   P+E  + ++I+G+   G    + E+   L  M+   S  T+  L   
Sbjct: 781 KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 840

Query: 518 FP 519
            P
Sbjct: 841 LP 842



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 218/506 (43%), Gaps = 39/506 (7%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F      +  LI+    AG+ DE++     M     +PD+ M   L+K      +  
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGE 271

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           + + ++  +++ G  P   AY A++   C+  + + A ++L  +  +G +P VVT   +I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            + C  G +  A +V + +    CKP V TY  L+Q    EG+  KAM LL++M      
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G C  G +  AF+ +R +E  G   D  +YN L+  L   G+ ++   L
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              + +RG++PN VT++ LI+ LC+ GK + A   L      G TPD Y+Y   I   CK
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
                  + F+  M+     P  VNY  ++    K  N       + ++   GC P+V +
Sbjct: 512 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 571

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y T   A    G    A  ++ EM   G+  D + YN+L+      G  D AV +L  M 
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK-----------------PNE 474
           S    P   +Y I++    + R + + + +  A   K  +                 PN 
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            TY  ++EG    G   EA  L + +
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLM 717


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 235/492 (47%), Gaps = 56/492 (11%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A+ +P T+          F  LI      G  + +    + M   GCKP+      L++ 
Sbjct: 147 AKVKPQTY---------TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 82  FFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           + +    +  + +++ +   G  P+  AYN +IS  C   Q   A K+++++R  G SPD
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAM 196
           +VT+N  I +LC  G I  A ++F  +  D      KP  +TY ++++    EG  ++A 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            + D M            +   +L  R       SYN+ +  L+  GK  E   ++ EM 
Sbjct: 318 AIFDSM------------KNSETLSLR-------SYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            + ++PN+ +Y+IL+  LC+ G   DA  +L   +E G+ PD  +Y  L+  YC+ G++ 
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  MI  GC P++   N +L +  K G A +A ++ + +++ G   +  + NTM 
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 377 SALWSSGDKIRALGMISEMLSKGIE-----------------------PDEITYNSLISC 413
           + L  +G+  +A+ ++S M ++G                         PD ITY ++I  
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGG 538

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+ G VDEA   L++M   +  P  + ++  I  +CK  +++ +  VL  M +KGC  +
Sbjct: 539 LCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKS 598

Query: 474 ETTYVLLIEGIG 485
             TY  LI+G+G
Sbjct: 599 LRTYNSLIQGLG 610



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 239/540 (44%), Gaps = 88/540 (16%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++   RAG     +  ++ M ++G  P+ V    +I     E ++ +A +++E + + G
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLR---SRGF-SPDVVTYNIMIGSLCSRGMI 157
             PD+  +N  I+  CK+ QI  A+++   ++     G   P+ VTYN+M+   CS GM 
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A  +FD + +++   ++ +Y I +   +  G+  +A  +L+EM               
Sbjct: 314 EEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK GM   A   +  +   G  PD ++Y+ LL      GK  E   ++ EMI  G 
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGC 432

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN+ T +IL+ SL ++G+  +A D+L+   E+G   D  + + +I+  CK G LD AIE
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIE 492

Query: 321 FLDYMISDG-----------------------CLPDIVNYNTILAAFCKNGNADQA---- 353
            +  M + G                       CLPD + Y TI+   CK G  D+A    
Sbjct: 493 IVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKL 552

Query: 354 -------------------------------LEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
                                            + +++   GC  ++ +YN++   L S 
Sbjct: 553 LEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSE 612

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                  G++ EM  +GI P+  TYN++ISCL   G + +A  LL +M      P + ++
Sbjct: 613 NQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTF 672

Query: 443 NIIILGF---CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            I+I  F   C      E  E+  ++    C   E+ Y  +   +  GG   +A EL  A
Sbjct: 673 RILIGAFFKACDFGAAQELFEIALSL----CGHKESLYSFMFNELLAGGETLKAKELFEA 728



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 195/456 (42%), Gaps = 78/456 (17%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  YN L     K ++++    +   +      P   T+N++I +LC  G +E+A +V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD++    CKP   +  IL++     G     + LLDEM                  +C 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---SRGL-EP 262
           +G   +A + V  +   G  PD++++N  +  L   G+  E  ++  +M      GL +P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 263 NVVTYSILISSLCRDGKTEDA----------------------VDVLRAAK--------- 291
           N VTY++++   C +G  E+A                      + ++R+ K         
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILN 355

Query: 292 ---EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              EK + P+ YSY+ L+   CK G    A   L  M   G  PD V Y+T+L  +C+ G
Sbjct: 356 EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A  +  ++  VGC PN+ + N +  +LW  G    A  ++  M  +G   D +T N
Sbjct: 416 KILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCN 475

Query: 409 SLISCLCRDGMVDEAVGLLVDM-----------------------ESTRFRPTVISYNII 445
           ++I+ LC+ G +D+A+ ++  M                          +  P  I+Y  I
Sbjct: 476 TMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATI 535

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           I G CK  R++E+ + L  M  K   P+   +   I
Sbjct: 536 IGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 76/426 (17%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  +P++++YN L+ G CK      A  +L  +R  G +PD VTY+ ++   C RG
Sbjct: 356 EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            I  A  V  ++++  C P + T  IL+ +   EG+  +A  LL  M             
Sbjct: 416 KILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCN 475

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNML 235
               G+CK G + +A + V  + +RG                       C PD I+Y  +
Sbjct: 476 TMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATI 535

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA----- 290
           +  L  +G+ +E +K + EMI + L P+ + +   I + C+ GK   A  VL+       
Sbjct: 536 IGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGC 595

Query: 291 ------------------------------KEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
                                         KE+G+ P+ Y+Y+ +IS   + G+L  A  
Sbjct: 596 NKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATC 655

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            LD M+  G  P+I  +  ++ AF K  +   A E+FE    + C    S Y+ MF+ L 
Sbjct: 656 LLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELL 714

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           + G+ ++A  +    L + +      Y  LI  LC+DG +D+A  +L  M   ++     
Sbjct: 715 AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPA 774

Query: 441 SYNIII 446
           S+  +I
Sbjct: 775 SFMPVI 780



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 163/309 (52%), Gaps = 8/309 (2%)

Query: 208 GMVGQAFQFVRSLESRGCQ--PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           G++  A    RSL  R     P +  YN+L R  L   + +    L  +M    ++P   
Sbjct: 95  GLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTY 154

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+++LIS+LC  G  E+A +V     EKG  P+ +S   L+  YC+ G     I+ LD M
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            S G LP+ V YNT++++ C  G   +A ++ EK+ +VG  P++ ++N   +AL  SG  
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 386 IRALGMISEML---SKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + A  +  +M      G+ +P+ +TYN ++   C +GM +EA  +   M+++    ++ S
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRS 333

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YNI +LG  ++ ++ E+  +L  M EK  KPN  +Y +L+ G+   G  ++A  +   L+
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL-GLM 392

Query: 502 SMHAISRDT 510
               ++ DT
Sbjct: 393 RESGVAPDT 401



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 76/413 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           R GK  E+ Y +  M+  GC P++  C  L+   ++E ++++A  +++++ + G   D  
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNV 472

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS-----------------------PDVVTY 144
             N +I+G CKA  ++ A +++  + +RG +                       PD +TY
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             +IG LC  G ++ A K   +++     P  + +   I                     
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI------------------YNY 574

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G +  AF+ ++ +E +GC   + +YN L++ L +  +  E   LM EM  RG+ PNV
Sbjct: 575 CKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNV 634

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ +IS L   GK +DA  +L    +KG++P+ Y++  LI A+ K      A E  + 
Sbjct: 635 YTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEI 694

Query: 325 MIS-----DGCLPDIVN-----------------------------YNTILAAFCKNGNA 350
            +S     +     + N                             Y  ++   CK+G  
Sbjct: 695 ALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           D A  I  K+ D     + +S+  +   L   G K  A      M+    E D
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 29/321 (9%)

Query: 16  VRVSSSAETRPNTHLLSFDVKET---------QFMKLIKRSFRAGKFDESLYFIESMVAN 66
            R S+S     N+ +  FD++            +  +I    + G+ DE+   +  M+  
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGK 558

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
              PD ++    I  + ++ K + A RV++ +EK G    +  YN+LI G    NQI   
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEI 618

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             ++D ++ RG  P+V TYN +I  L   G ++ A  + D++L+    P + T+ ILI A
Sbjct: 619 YGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGA 678

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                   KA         C  G   + F+   SL    C      Y+ +   LL  G+ 
Sbjct: 679 FF------KA---------CDFGAAQELFEIALSL----CGHKESLYSFMFNELLAGGET 719

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            + ++L    + R L      Y  LI  LC+DGK +DA  +L    +K  + D  S+ P+
Sbjct: 720 LKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPV 779

Query: 306 ISAYCKDGRLDLAIEFLDYMI 326
           I    K G    A EF + M+
Sbjct: 780 IDELGKRGSKHAADEFAERMM 800


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 199/396 (50%), Gaps = 20/396 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V ++N L+     A +++ A +  D + S    PDVVTY  M+   C RG +E+A K+ 
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLL 310

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D++     +     YT +I     +GQ   A+++L++M                 G C K
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSK 370

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +  A +    ++ RG   D +++  L+  L   G+ +E ++++ EM+ +GL+ +VVTY
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI   C+ G   +A  V      + + P+  +Y  L    CK G +  A E L  M +
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G   ++  YN+++   CK GN +QA+ I  ++   G   +V +Y T+   L  SG+  R
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  M+ EML KGI+P   TYN L++  C  G V+    LL  M     RP V++YN ++ 
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +C  + +  + E+   M  +   PNE TY +LI+G
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 207/431 (48%), Gaps = 21/431 (4%)

Query: 70  PDVVMCTK--LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK 127
           PD  +C+   L+K      +   A +  +  E    PDV  Y  ++ G+C   ++E A K
Sbjct: 251 PDKNVCSHNILLKALLSAGRLKDACQHFD--EMSSPPDVVTYGTMVHGYCVRGELENAVK 308

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           +LD + ++G   +   Y  +I  LC++G +  A +V + +         + +T +I    
Sbjct: 309 LLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFC 368

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
            +G    A +L +EM                 G+C+ G + +A + ++ +  +G   DV+
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVV 428

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y +L+      G   E  ++  EM+ R + PNVVTY+ L   LC+ G    A ++L   
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM 488

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             KGL  + Y+Y+ LI+  CK G L+ A+  +  M + G   D+  Y T++   CK+G  
Sbjct: 489 CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEF 548

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+A  + +++ D G  P++++YN + +    SG       ++  ML K + P+ +TYNSL
Sbjct: 549 DRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSL 608

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           +   C D  +     +   M S    P   +YNI+I G CK R + E++     M EKG 
Sbjct: 609 MKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668

Query: 471 KPNETTYVLLI 481
           +   ++Y  LI
Sbjct: 669 RLTASSYSALI 679



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 157/333 (47%), Gaps = 21/333 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    RAG+  E+   ++ MV  G   DVV  T LI  + +     +A RV  E++ + 
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y AL  G CK   +  AN++L  + ++G   +V TYN +I  LC  G +E A 
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++  ++     +  V TYT LI      G+ D+A  +L EM                   
Sbjct: 518 RIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM------------------L 559

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G +P + +YN+L+      G+ E G+KL+  M+ + + PNVVTY+ L+   C D   +
Sbjct: 560 DKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMK 619

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
              ++ +    + + P+  +Y+ LI  +CK   +  A+ F   MI  G      +Y+ ++
Sbjct: 620 STTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679

Query: 342 AAFCKNGNADQALEIFEKLSDVG--CPPNVSSY 372
               K     +A   F+K+ + G    P+V S+
Sbjct: 680 RLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 54/235 (22%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++G+FD +   ++ M+  G KP +                           
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIA-------------------------- 568

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN L++GFC + ++E   K+L+ +  +   P+VVTYN ++   C    ++S
Sbjct: 569 --------TYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS 620

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
             +++  +      P   TY ILI+                  G CK   + +A  F + 
Sbjct: 621 TTEIYKGMHSQEVAPNENTYNILIK------------------GHCKARNMKEALYFHQE 662

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL--EPNVVTYSILIS 272
           +  +G +    SY+ L+R L    K+ E      +M + GL  EP+V ++ + IS
Sbjct: 663 MIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 209/452 (46%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+ +E L  IE+    GC P VV    LI  + +     + + ++  +E  G  P +  Y
Sbjct: 218 GRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTY 277

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            +LI+   K   +E    +   +R RG SP+V  YN +I +LC       A  +  Q+  
Sbjct: 278 GSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA 337

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVGQ 212
             C P +IT+  LI     EG   KA   L E                  G C +G +  
Sbjct: 338 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMA 397

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +  RG  PDV+++  L+  L+  GK  E   +  +M  R + P+V  Y++LIS
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+      A ++L    EK + PD + Y  LI  + +   L  A +  ++M   G  P
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DIV+ N ++  +C+ G   +A+     +  VGC P+  +Y T+ S     G+   AL  +
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+ +  +P+ +TY+SLI+  C+ G  D A GL  +M++    P V++Y I+I    K 
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 637

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++  +      M    C PN+ T   L+ G+
Sbjct: 638 DKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 202/423 (47%), Gaps = 19/423 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G  P+V  C +L+K   ++R+ + A ++  E+L +    D ++   L+ G C   ++E  
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            K+++     G  P VV YN++I   C RG +     +  ++      PT++TY  LI  
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
              +G  +K   L  EM                    RG  P+V  YN ++  L      
Sbjct: 284 LGKKGDLEKIGSLFLEM------------------RKRGLSPNVQIYNSVIDALCKCWSA 325

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            +   ++ +M + G +P+++T++ LI+ LC +G    A   LR A  + L P+  SY PL
Sbjct: 326 TQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 385

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I  +C  G L  A + L  M+  G  PD+V +  ++      G   +AL + EK+++   
Sbjct: 386 IHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 445

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V+ YN + S L        A  ++ EML K ++PDE  Y +LI    R   + +A  
Sbjct: 446 FPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 505

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +   ME    RP ++S N +I G+C+   ++E+I  ++ M + GC P+E TY  +I G  
Sbjct: 506 IFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 565

Query: 486 YGG 488
             G
Sbjct: 566 KQG 568



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 204/456 (44%), Gaps = 38/456 (8%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALI 113
           +++  ++ M A+GC PD++    LI     E    KA   + E + +   P+  +Y  LI
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 386

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            GFC   ++  A+ +L  +  RG +PDVVT+  +I  L   G +  A  V +++      
Sbjct: 387 HGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 446

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P V  Y +LI                   G+CKK M+  A   +  +  +  QPD   Y 
Sbjct: 447 PDVNIYNVLIS------------------GLCKKHMLPAAKNILEEMLEKNVQPDEFVYA 488

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L+   +      +  K+   M  +G+ P++V+ + +I   C+ G   +A+  +   ++ 
Sbjct: 489 TLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 548

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD ++Y  +IS Y K G L+ A+ +L  MI   C P++V Y++++  +CK G+ D A
Sbjct: 549 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 608

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY----NS 409
             +F  +      PNV +Y  +  +L+     +RA      ML     P+++T     N 
Sbjct: 609 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 668

Query: 410 LISCL--------CRDGMVDEAVGLLVDMESTRFR---PTVISYNIIILGFCKTRRINES 458
           L SC         C    V     LLV  +   F    P   +YN II   C+   + E+
Sbjct: 669 LTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREA 728

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGG----WR 490
           ++    M +KG  PN  T++ L+ G    G    WR
Sbjct: 729 LDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWR 764



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 180/382 (47%), Gaps = 19/382 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFK 162
           P      AL++ +  A  +  A  + +RLR + G  P+V   N ++  L  +   + A K
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           ++D++L ++      +  +L++   LEG+ ++ +KL++                  +   
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIE------------------ARWG 232

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P V+ YN+L+      G    G  L+ EM ++G  P +VTY  LI+ L + G  E 
Sbjct: 233 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 292

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
              +    +++GL+P+   Y+ +I A CK      A+  L  M + GC PDI+ +NT++ 
Sbjct: 293 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 352

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C  G+  +A     +       PN  SY  +       G+ + A  ++ EM+ +G  P
Sbjct: 353 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 412

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D +T+ +LI  L   G V EA+ +   M   +  P V  YN++I G CK   +  +  +L
Sbjct: 413 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNIL 472

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M EK  +P+E  Y  LI+G 
Sbjct: 473 EEMLEKNVQPDEFVYATLIDGF 494



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 1/288 (0%)

Query: 208 GMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           GM+G+A      L E  G  P+V   N LL+ L+   +W++  KL  EM+      +  +
Sbjct: 147 GMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYS 206

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
             +L+  LC +G+ E+ + ++ A    G  P    Y+ LI  YC+ G +   +  L  M 
Sbjct: 207 TCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 266

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G LP +V Y +++    K G+ ++   +F ++   G  PNV  YN++  AL       
Sbjct: 267 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 326

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +A+ ++ +M + G +PD IT+N+LI+ LC +G V +A   L +       P  +SY  +I
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 386

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            GFC    +  + ++L  M  +G  P+  T+  LI G+   G  +EA+
Sbjct: 387 HGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 434



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 129/343 (37%), Gaps = 68/343 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           F  LI     AGK  E+L   E M      PDV +   LI    ++     A  ++E +L
Sbjct: 417 FGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEML 476

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK  +PD F Y  LI GF ++  +  A K+ + +  +G  PD+V+ N MI   C  GM+ 
Sbjct: 477 EKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMS 536

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A      + +  C P   TYT +I     +G  + A++ L +M                
Sbjct: 537 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G CK G    A     ++++    P+V++Y +L+ +L    K          M+     
Sbjct: 597 NGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCS 656

Query: 262 PNVVT--------------------------------------------------YSILI 271
           PN VT                                                  Y+ +I
Sbjct: 657 PNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAII 716

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
            SLCR     +A+D      +KG  P+  ++  L+  +C  G+
Sbjct: 717 FSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           +IK   + G   E++  + +M   GC PD    T +I  + ++   N A+R + +++++ 
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y++LI+G+CK    + A  +   +++   SP+VVTY I+IGSL  +  +  A 
Sbjct: 585 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 644

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV--RS 219
             F+ +L ++C P  +T   L+      G T     +++ +      + G+    V  + 
Sbjct: 645 LYFETMLLNHCSPNDVTLHYLVN-----GLTSCTPCVINSICCNTSEVHGKDALLVVFKK 699

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L      P   +YN ++ +L       E       M  +G  PN +T+  L+   C  GK
Sbjct: 700 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759

Query: 280 TEDAVDVL 287
           + +   +L
Sbjct: 760 SMNWRTIL 767


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 199/406 (49%), Gaps = 30/406 (7%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKA------VRVMEILEKYGEPDVFAYNALISGF 116
           M   G  P +V    +I    +  +   A      +R M +L     PD+  YN++++G+
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL-----PDLITYNSMLNGY 394

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           CKA  ++ A  +L  LR  G +P V+TYN +I   C  G +E A ++ ++++   C P V
Sbjct: 395 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDV 454

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            TYTIL+  +        A +  DEM                   S+G QPD  +YN  +
Sbjct: 455 CTYTILMNGSHKVRNLPMAREFFDEM------------------LSKGLQPDCFAYNTRI 496

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
              L +G   +  +L   M+ +G+ P+ VTY+++I  LC+ G  +DA D+       GL 
Sbjct: 497 CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  +Y  LI A+C+ G L  A + L+ M+SDG  P +V Y  ++   C+ GN   A   
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGW 616

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F K+ DVG  PN  +YN +  AL  +G  + A     EML +G+ P++ TY  LI   CR
Sbjct: 617 FRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +G   +A+ L  +M      P   ++N +  GF K   +  +IE L
Sbjct: 677 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKG-HMYHAIEYL 721



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 228/489 (46%), Gaps = 25/489 (5%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H ++ DV++   +  + R   A ++D+       M+    +P +V    L+  F +E + 
Sbjct: 202 HGVAPDVRDCNCVLRVLRD--AARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRK 259

Query: 89  NKAVRVMEILEKYGEPDVF---AYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTY 144
           ++A  +++ +E  G   +     YN +IS   +   +E A K++D +R S+  S    TY
Sbjct: 260 DEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASS--FTY 317

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD---------KA 195
           N +I +L  RG ++    +  ++  +   PT++TY  +I   +   Q +         +A
Sbjct: 318 NPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRA 377

Query: 196 MKLLDEM--------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           M LL ++        G CK G + +A   +  L   G  P V++YN L+     +G  EE
Sbjct: 378 MGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEE 437

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EM+ +G  P+V TY+IL++   +      A +       KGL PD ++Y+  I 
Sbjct: 438 ARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRIC 497

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A    G    A +  + M+  G  PD V YN I+   CK GN   A ++  K+   G  P
Sbjct: 498 AELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQP 557

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  +Y  +  A    G    A  +++ M+S G++P  +TY  LI   CR G +  A G  
Sbjct: 558 DCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWF 617

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M      P  I+YN++I   C+T R   +      M E+G  PN+ TY LLI+G    
Sbjct: 618 RKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCRE 677

Query: 488 GWRAEAMEL 496
           G  A+A+ L
Sbjct: 678 GNWADAIRL 686



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 176/384 (45%), Gaps = 18/384 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  YNA+I G  K+ Q+E A      +R+ G  PD++TYN M+   C  G ++ A  +
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              L R    PTV+TY  LI                   G C+ G + +A +    +  +
Sbjct: 407 LGDLRRAGLAPTVLTYNTLID------------------GYCRLGGLEEARRLKEEMVEQ 448

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC PDV +Y +L+     +       +   EM+S+GL+P+   Y+  I +    G T  A
Sbjct: 449 GCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKA 508

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +      KG+ PD  +Y+ +I   CK G L  A +    M+SDG  PD + Y  ++ A
Sbjct: 509 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHA 568

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C+ G   +A ++   +   G  P+V +Y  +       G+   A G   +ML  GIEP+
Sbjct: 569 HCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPN 628

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           EITYN LI  LCR G    A     +M      P   +Y ++I G C+     ++I +  
Sbjct: 629 EITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYF 688

Query: 464 AMFEKGCKPNETTYVLLIEGIGYG 487
            M + G  P+  T+  L +G   G
Sbjct: 689 EMHQNGIPPDYCTHNALFKGFDKG 712



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 28/391 (7%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G +PDV   N ++  L      +    V+ ++L+   +PT++TY  L+ + + EG+ D+
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 195 AMKLLDEM----GMC---------------KKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           A  LL EM    G C               ++G +  A + V S+     +    +YN L
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPL 320

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +  LL  G  ++ E L  EM + G+ P +VTY+ +I  L +  + E A       +  GL
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  +Y+ +++ YCK G L  A+  L  +   G  P ++ YNT++  +C+ G  ++A  
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM----ISEMLSKGIEPDEITYNSLI 411
           + E++ + GC P+V +Y    + L +   K+R L M      EMLSKG++PD   YN+ I
Sbjct: 441 LKEEMVEQGCFPDVCTY----TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI 496

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                 G   +A  L   M      P  ++YN+II G CKT  + ++ ++   M   G +
Sbjct: 497 CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY  LI      G  +EA +L N +VS
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVS 587



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 143/270 (52%), Gaps = 7/270 (2%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +   G  PDV   N +LR L +  +W++   +  EM+   +EP +VTY+ L+ S  ++
Sbjct: 197 RVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKE 256

Query: 278 GKTEDAVDVLRAAKEKG---LTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDGCLPD 333
           G+ ++A  +L+  + +G   L  D  +Y+ +IS   ++G L+ A + +D M +S      
Sbjct: 257 GRKDEASMLLKEMETQGGGCLLNDV-TYNVVISFLAREGHLENAAKLVDSMRLSKKA--S 313

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
              YN ++ A  + G   +   +  ++ + G  P + +YN +   L  S     A    +
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM + G+ PD ITYNS+++  C+ G + EA+ LL D+      PTV++YN +I G+C+  
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            + E+  +   M E+GC P+  TY +L+ G
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNG 463



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 1/144 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      G   E+   +  MV++G +P VV  T LI    +      A      +   G
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG 624

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+   YN LI   C+  +  LA      +  RG +P+  TY ++I   C  G    A 
Sbjct: 625 IEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAI 684

Query: 162 KVFDQLLRDNCKPTVITYTILIQA 185
           +++ ++ ++   P   T+  L + 
Sbjct: 685 RLYFEMHQNGIPPDYCTHNALFKG 708



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLI 411
           L  F  ++  G  P+V   N +   L  +   D +RA+    EML   IEP  +TYN+L+
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAV--YREMLQLEIEPTIVTYNTLL 250

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTV--ISYNIIILGFCKTRRINESIEVLAAMFEKG 469
               ++G  DEA  LL +ME+      +  ++YN++I    +   +  + +++ +M    
Sbjct: 251 DSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLS 309

Query: 470 CKPNETTYVLLIEGIGYGGW--RAEA--MELAN-----ALVSMHAISRDTFK 512
            K +  TY  LI  +   G+  + EA  ME+ N      LV+ +AI     K
Sbjct: 310 KKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLK 361


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 212/437 (48%), Gaps = 19/437 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            ++ L     MV NG  PDV  C +++K    +   N+   V  ++ K    P +  +N 
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNT 212

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           ++   CK  ++  A +VLD +R  G  P+ V+YN+++  L  +G  + A ++ +Q+    
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            K +  TY  LI+                  G CKK M  +A    R +  RG  P V++
Sbjct: 273 LKVSAHTYNPLIR------------------GFCKKEMFEEANDLRREMLGRGALPTVVT 314

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN ++ +L  +G+  +  + +  M++  L P++V+Y+ LI    R G   +A+ +    +
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            K L P   +Y+ LI   C+ G LD+A    D MI  G  PD+V +  ++  FC+ GN  
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A E+F+++   G  P+  +Y T        G+  +A GM  EM ++G  PD ITYN LI
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC+ G  D+A  L+  M      P  ++Y  II     +  + ++ EV + M +KG  
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554

Query: 472 PNETTYVLLIEGIGYGG 488
           P+  TY +LI      G
Sbjct: 555 PSVVTYTVLIHSYAVRG 571



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 224/484 (46%), Gaps = 26/484 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+   ++  ++ M   GC P+ V    L+     + + ++A  ++E +   G +    
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI GFCK    E AN +   +  RG  P VVTYN ++ SLC  G +  A +  D +
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           + ++  P +++Y  LI                   G  + G   +A      L S+   P
Sbjct: 339 VNEDLMPDLVSYNTLIY------------------GYSRLGNFAEALLLFSELRSKNLVP 380

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V++YN L+      G  +  + +  +MI  GL P+VVT++IL+   C+ G    A ++ 
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +GL PD  +Y   I    K G    A    + M ++G  PD++ YN ++   CK 
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN D A E+ +K+   G  P+  +Y ++  A   SG   +A  + S+ML KGI P  +TY
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             LI      G +D A     +M+     P VI+YN +I G CK   ++ +  + A M  
Sbjct: 561 TVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMES 620

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT------FKRLNRTFPLL 521
           KG  PN+ TY +LI       +  +A++L   ++    I  D+       K L++ + LL
Sbjct: 621 KGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD-REIKPDSCTHSALMKHLSKDYKLL 679

Query: 522 DVYK 525
            V +
Sbjct: 680 AVLR 683



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 18/258 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L++   + G    +    + M++ G KPD +  T  I    +    +KA  + E ++
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+  YN LI+G CK    + AN+++ ++R  G  PD VTY  +I +    G++ 
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VF  +L+    P+V+TYT+LI +  + G+ D A K  DEM                
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+ M+  A+     +ES+G  P+  +Y +L+    N+  W++  KL  +M+ R ++
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659

Query: 262 PNVVTYSILISSLCRDGK 279
           P+  T+S L+  L +D K
Sbjct: 660 PDSCTHSALMKHLSKDYK 677



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 158/314 (50%), Gaps = 2/314 (0%)

Query: 191 QTDKAMKLLDEM--GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
            ++ ++KLLD +     KK ++ +       + + G  PDV + N +L+ L +     E 
Sbjct: 132 NSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEV 191

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           E++ + MI   + P +VT++ ++ S C++G+   AV+VL   +  G  P+  SY+ L++ 
Sbjct: 192 EEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNG 251

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
               G  D A E ++ M   G       YN ++  FCK    ++A ++  ++   G  P 
Sbjct: 252 LSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPT 311

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V +YNT+  +L   G    A   +  M+++ + PD ++YN+LI    R G   EA+ L  
Sbjct: 312 VVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFS 371

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           ++ S    P+V++YN +I G C+T  ++ +  +   M + G  P+  T+ +L+ G    G
Sbjct: 372 ELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMG 431

Query: 489 WRAEAMELANALVS 502
               A EL + ++S
Sbjct: 432 NLPMAKELFDEMLS 445



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 113/245 (46%)

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R  E +V    +LI    +    E  + V       GL PD  + + ++        ++ 
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
             E    MI     P IV +NT++ + CK G   +A+E+ + +   GC PN  SYN + +
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L   G+  RA  +I +M   G++    TYN LI   C+  M +EA  L  +M      P
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           TV++YN I+   C+  R++++   L  M  +   P+  +Y  LI G    G  AEA+ L 
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 498 NALVS 502
           + L S
Sbjct: 371 SELRS 375


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 210/451 (46%), Gaps = 18/451 (3%)

Query: 52   KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
            + +E L  IE+    GC P VV    LI  + +     + + ++  +E  G  P +  Y 
Sbjct: 993  RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYG 1052

Query: 111  ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +LI+   K   +E    +   +R RGFSP+V  YN +I +LC+      A  +  Q+   
Sbjct: 1053 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFAS 1112

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVGQA 213
             C P +IT+  LI     EG   KA   L E                  G C +G +  A
Sbjct: 1113 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1172

Query: 214  FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               +  +  RG  PDV+++  L+  L+  GK  E   +  +M  R + P+V  Y++LIS 
Sbjct: 1173 SDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 1232

Query: 274  LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            LC+      A ++L    EK + PD + Y  LI  + +   L  A +  ++M   G  PD
Sbjct: 1233 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPD 1292

Query: 334  IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            IV+ N ++  +C+ G   +A+     +  VGC P+  +Y T+ S     G+   AL  + 
Sbjct: 1293 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1352

Query: 394  EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            +M+ +  +P+ +TY+SLI+  C+ G  D A GL  +M++    P V++Y I+I    K  
Sbjct: 1353 DMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKD 1412

Query: 454  RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++  +      M    C PN+ T   L+ G+
Sbjct: 1413 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 204/423 (48%), Gaps = 19/423 (4%)

Query: 67   GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
            G  P+V  C +L+K   ++R+ + A ++  E+L K    D ++   L+ G C   ++E  
Sbjct: 938  GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 997

Query: 126  NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             K+++     G  P VV YN++I   C RG +     +  ++  +   PT++TY  LI  
Sbjct: 998  LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINW 1057

Query: 186  TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
               +G  +K   L  EM                    RG  P+V  YN ++  L N    
Sbjct: 1058 LGKKGDLEKIGSLFLEM------------------RKRGFSPNVQIYNSVIDALCNCRSA 1099

Query: 246  EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
             +   ++ +M + G +P+++T++ LI+ LC +G    A   LR A  + L P+  SY PL
Sbjct: 1100 TQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 1159

Query: 306  ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
            I  +C  G L +A + L  M+  G  PD+V +  ++      G   +AL + EK+++   
Sbjct: 1160 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1219

Query: 366  PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             P+V+ YN + S L        A  ++ EML K ++PDE  Y +LI    R   + +A  
Sbjct: 1220 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1279

Query: 426  LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            +   ME     P ++S N +I G+C+   ++E+I  ++ M + GC P+E TY  +I G  
Sbjct: 1280 IFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 1339

Query: 486  YGG 488
              G
Sbjct: 1340 KQG 1342



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 202/446 (45%), Gaps = 34/446 (7%)

Query: 55   ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALI 113
            +++  ++ M A+GC PD++    LI     E    KA   + E + +   P+  +Y  LI
Sbjct: 1101 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1160

Query: 114  SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
             GFC   ++ +A+ +L  +  RG +PDVVT+  +I  L   G +  A  V +++      
Sbjct: 1161 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1220

Query: 174  PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
            P V  Y +LI                   G+CKK M+  A   +  +  +  QPD   Y 
Sbjct: 1221 PDVNIYNVLIS------------------GLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1262

Query: 234  MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
             L+   +      +  K+   M  +G+ P++V+ + +I   C+ G   +A+  +   ++ 
Sbjct: 1263 TLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 1322

Query: 294  GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            G  PD ++Y  +IS Y K G L+ A+ +L  MI   C P++V Y++++  +CK G+ D A
Sbjct: 1323 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 1382

Query: 354  LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY----NS 409
              +F  +      PNV +Y  +  +L+     +RA      ML     P+++T     N 
Sbjct: 1383 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1442

Query: 410  LISCL--------CRDGMVDEAVGLLVDMESTRFR---PTVISYNIIILGFCKTRRINES 458
            L SC         C    V     LLV  +   F    P   +YN II   C+   + E+
Sbjct: 1443 LTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREA 1502

Query: 459  IEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++    M +KG  PN  T++ L+ G 
Sbjct: 1503 LDFKNRMAKKGYVPNPITFLSLLYGF 1528



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 208  GMVGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            GM+G+A +   R  E  G  P+V   N LL+ L+   +W++  KL  EM+ +    +  +
Sbjct: 921  GMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYS 980

Query: 267  YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
              +L+  LC + + E+ + ++ A    G  P    Y+ LI  YC+ G +   +  L  M 
Sbjct: 981  TCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 1040

Query: 327  SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            ++G LP +V Y +++    K G+ ++   +F ++   G  PNV  YN++  AL +     
Sbjct: 1041 TNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSAT 1100

Query: 387  RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            +A+ ++ +M + G +PD IT+N+LI+ LC +G V +A   L +       P  +SY  +I
Sbjct: 1101 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1160

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             GFC    +  + ++L  M  +G  P+  T+  LI G+   G  +EA+
Sbjct: 1161 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1208



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 130/343 (37%), Gaps = 68/343 (19%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
            F  LI     AGK  E+L   E M      PDV +   LI    ++R    A  ++E +L
Sbjct: 1191 FGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEML 1250

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            EK  +PD F Y  LI GF ++  +  A K+ + +  +G  PD+V+ N MI   C  GM+ 
Sbjct: 1251 EKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMS 1310

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A      + +  C P   TYT +I     +G  + A++ L +M                
Sbjct: 1311 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1370

Query: 203  -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             G CK G    A     ++++    P+V++Y +L+ +L    K          M+     
Sbjct: 1371 NGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCS 1430

Query: 262  PNVVT--------------------------------------------------YSILI 271
            PN VT                                                  Y+ +I
Sbjct: 1431 PNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAII 1490

Query: 272  SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
             SLCR     +A+D      +KG  P+  ++  L+  +C  G+
Sbjct: 1491 FSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
            +IK   + G   E++  + +M   GC PD    T +I  + ++   N A+R + +++++ 
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1358

Query: 102  GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             +P+V  Y++LI+G+CK    + A  +   +++   SP+VVTY I+IGSL  +  +  A 
Sbjct: 1359 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1418

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV--RS 219
              F+ +L ++C P  +T   L+      G T     +++ +      + G+    V  + 
Sbjct: 1419 LYFETMLLNHCSPNDVTLHYLVN-----GLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1473

Query: 220  LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            L      P   +YN ++ +L       E       M  +G  PN +T+  L+   C  GK
Sbjct: 1474 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533

Query: 280  TEDAVDVL 287
            + +   +L
Sbjct: 1534 SVNWRTIL 1541



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 16/180 (8%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ--------------ERKS 88
            LI   F+  K   +  + E+M+ N C P+ V    L+                   E   
Sbjct: 1404 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1463

Query: 89   NKAVRVM--EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
              A+ V+  +++   G+P   AYNA+I   C+ N +  A    +R+  +G+ P+ +T+  
Sbjct: 1464 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 1523

Query: 147  MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
            ++   CS G   +   +     +      +  Y  L      E    +  ++L  +  CK
Sbjct: 1524 LLYGFCSVGKSVNWRTILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQHLAGCK 1583


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 222/516 (43%), Gaps = 55/516 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVM 95
           E   +  I    RAG  D +L         GC+ P V +   L+    +E      V V 
Sbjct: 86  EDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVY 145

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           + + K G +P+V+ YN LI   C+ ++++ A K+LD +  +G  PD V++  ++  +C  
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205

Query: 155 GMIESA------------------------------FKVFDQLLRDNCKPTVITYTILIQ 184
           G +E A                              F V +++++   +P V+TYT ++ 
Sbjct: 206 GRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 265

Query: 185 ATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
           A     +   A  +L  M                 G  + G V  A      +   G  P
Sbjct: 266 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 325

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             ISYN+L+R L  +G  +        M    L PN  TYS L+      G  + A+ + 
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 385

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  G  P+   Y  +I   CK    D A   +D M+ D C P+ V +NT++   C  
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +AL +F  +   GC PN  +YN +   L+  G+   A  M+ EML+ G E   +TY
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N++I+CLC+  M   A+ LL  M     +P   ++N II  +CK  +++ +  +L  M  
Sbjct: 506 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 565

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             C  N   Y +LI  +   G      +L+NA+V +
Sbjct: 566 VNCPRNVVAYTILISELCNQG------KLSNAMVYL 595



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 172/342 (50%), Gaps = 18/342 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +  MV+ GC P+V+  T L+K FF++ K + A+ +   +   G  P   +YN LI G C
Sbjct: 279 ILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLC 338

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               ++ A    + ++     P+  TY+ ++    + G ++ A  +++++    CKP V+
Sbjct: 339 CIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVV 398

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSL 220
            YT +I     +   D+A  L+D+M M                 C  G VG+A      +
Sbjct: 399 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 458

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC P+  +YN LL  L   G  ++   ++ EM++ G E ++VTY+ +I+ LC+    
Sbjct: 459 RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMR 518

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A+ +L     +G+ PDA++++ +I AYCK+G++ +A   L  M +  C  ++V Y  +
Sbjct: 519 KHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTIL 578

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           ++  C  G    A+    K+   G  PN +++N +  A++++
Sbjct: 579 ISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 52/321 (16%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  L+     AG  D ++     M ++GCKP+VV+                       
Sbjct: 363 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV----------------------- 399

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                      Y  +I   CK    + A  ++D++      P+ VT+N +IG LC  G +
Sbjct: 400 -----------YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 448

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A  VF  + R+ C P   TY  L+                   G+ ++G    AF  V
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLH------------------GLFREGNHKDAFAMV 490

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + + G +  +++YN ++  L  M   +    L+  M+ +G++P+  T++ +I + C++
Sbjct: 491 IEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKE 550

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK   A  +L          +  +Y  LIS  C  G+L  A+ +L  M+ +G  P+   +
Sbjct: 551 GKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 610

Query: 338 NTILAAFCKNGNADQALEIFE 358
           N ++ A   N      + +F+
Sbjct: 611 NVLVRAIFTNIGTIGPIHLFK 631



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 34/193 (17%)

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + AF + G+AD+AL+ F + SD+GC                                   
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCR---------------------------------- 118

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P    YN L+  L R+ MV   V +  +M      P V +YN++I   C+  R++ + +
Sbjct: 119 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 178

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 520
           +L  M  KGC P+E ++  ++ G+   G   EA       V + A        L   F +
Sbjct: 179 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 238

Query: 521 LDVYKEISHLATK 533
            +V+  ++ +  +
Sbjct: 239 WEVFSVVNEMVQR 251


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 18/400 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            +YN L+    K+ + +      + +   G  P+  TY  ++ SLC     E A  VF  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +    C P V +Y+ILI       + D+A +LL+EM                     G Q
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM------------------IDGGHQ 119

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++Y  LL  L  MGK +E   L + M+ RG  P+ V Y++LI    + G   +A  +
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                EKG  P  ++Y+ L+S + + G           M+  GC+P+I  +N +L  FCK
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G+  +A  +F ++  +GCPP+V SYNT+   + S G    A  ++ EM+  G+ PD ++
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI    + G +D A+ L  ++  +   P   SY+ II   C+  ++  +  V   M 
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             G  P+    + L+ G+  G    E+ EL  A+V    +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 210/434 (48%), Gaps = 20/434 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+ D        M+  GC P+      L++   Q ++  +A  V   +   G  P+VF
Sbjct: 29  KSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y+ LI+G C+  +++ A ++L+ +   G  P+VVTY  ++  LC  G ++ A  +F ++
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +   C P  + Y +LI                   G  KKG +G+A++    +  +GC P
Sbjct: 149 VYRGCPPDGVVYNVLID------------------GFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V +YN LL      G++   + L  +M+ +G  PN+ T++ L+   C+ G   +A  + 
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G  PD  SY+ L+   C  G+   A   L  MI  G  PDIV+YN ++  + K+
Sbjct: 251 LEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D A+++F ++   G  P+  SY+T+   L  +G    A  +  +M++ G  PD    
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVV 370

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             L+  LCR   + E+  L   M      P +  YN+++   CK +R ++  E+   + E
Sbjct: 371 IPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 468 KGCKPN-ETTYVLL 480
           +G  P+ E + V+L
Sbjct: 431 RGFSPDVEISKVIL 444



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 195/396 (49%), Gaps = 27/396 (6%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PNT+   +         L++   +A +F+E+      M A GC P+V   + LI    + 
Sbjct: 50  PNTYTYGY---------LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 86  RKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           +K ++A  ++ E+++   +P+V  Y +L+SG CK  +++ A  +  R+  RG  PD V Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           N++I     +G +  A+++F+++L   C PTV TY  L+     +G+  +   L  +M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G CK G + +A +    + S GC PDV+SYN L+R + + GK  E
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            ++L+ EMI  G+ P++V+Y+ILI    + G  + A+ +     + GL PDA+SY  +I 
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             C+ G++  A      MI++G  PD      ++   C+     ++ E+F+ +    C P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            +  YN +   L  +        +  E+  +G  PD
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 178/346 (51%), Gaps = 18/346 (5%)

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           ++   ++YN ++  L   G  +  +  ++ +L   C P   TY  L+++           
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS----------- 61

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                  +C+     +A    R + ++GC P+V SY++L+  L    K +E  +L+ EMI
Sbjct: 62  -------LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G +PNVVTY  L+S LC+ GK ++AVD+      +G  PD   Y+ LI  + K G + 
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A    + M+  GC+P +  YN++L+ F + G   +   +F+ +   GC PN+ ++N + 
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                 GD + A  +  EM S G  PD ++YN+L+  +C  G   EA  LL +M  +   
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           P ++SYNI+I G+ K+  ++ +I++   + + G +P+  +Y  +I+
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 18/218 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + G   E+      M + GC PDVV    L++    + K ++A R++  + 
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PD+ +YN LI G+ K+  ++ A K+   +   G  PD  +Y+ +I  LC  G + 
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AF VF  ++ +   P       L+       +  ++ +L   M                
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             +CK        +    L  RG  PDV    ++L TL
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 217/486 (44%), Gaps = 51/486 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G   E+    + M+  G +P V+    L+K   +    + A+++  ++ K G  PD  
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ L+ G  K    E A+ +   + +RGF+   +T+N MI  LC  G +  A ++FD++
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C P  ITY  LI                   G CK   VGQAF+   ++E     P
Sbjct: 534 KDLGCSPDGITYRTLID------------------GYCKASNVGQAFKVKGAMEREPISP 575

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +  YN L+  L    +  E   L+TEM  RGL PN+VTY  LI   C++G  + A    
Sbjct: 576 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI------------- 334
               E GL+ +      ++S   + GR+D A   +  M+  G  PD              
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 695

Query: 335 -------------------VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                              + YN  +A  CK G  D A   F  LS  G  P+  +Y T+
Sbjct: 696 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 755

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                ++G+   A  +  EML +G+ P+ +TYN+LI+ LC+   VD A  L   +     
Sbjct: 756 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 815

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P V++YN +I G+CK   ++ + ++   M E+G  P+  TY  LI G+   G    +M+
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMK 875

Query: 496 LANALV 501
           L N ++
Sbjct: 876 LLNQMI 881



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 225/490 (45%), Gaps = 54/490 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    + G+   + Y  + M+  G  PDV M + ++  F ++ K ++A   ++ +E  G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP++  Y++LI+G+     +E A  VL  +  +G S +VVTY ++I   C +  ++ A 
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 162 KVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           KV   +  +    P    Y +LI      G+ D A++LLDEM                 G
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CK+G + +A   +  +     +PD  SYN LL      G   E   L  +M+  G+EP 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL------------------ 305
           V+TY+ L+  LCR G  +DA+ +     ++G+ PD   Y  L                  
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 306 -----------------ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                            IS  CK G++  A E  D M   GC PD + Y T++  +CK  
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  QA ++   +      P++  YN++ S L+ S   +    +++EM  +G+ P+ +TY 
Sbjct: 557 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 616

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C++GM+D+A     +M        +I  + ++ G  +  RI+E+  ++  M + 
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 469 GCKPNETTYV 478
           G  P+   ++
Sbjct: 677 GFFPDHECFL 686



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 223/453 (49%), Gaps = 18/453 (3%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    T F  ++K     G    +LY  ++M   G  P +  C  L+    +  +++ A 
Sbjct: 152 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V + + + G  PDVF  + +++ FCK  +++ A   + ++ + G  P++VTY+ +I   
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            S G +E+A  V   +        V+TYT+LI+    + + D+A K+L       +GM  
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL-------RGMQE 324

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A             PD  +Y +L+      GK ++  +L+ EM+  GL+ N+   + LI
Sbjct: 325 EA----------ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G+  +A  V+    +  L PD+YSY+ L+  YC++G    A    D M+ +G  
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P ++ YNT+L   C+ G  D AL+I+  +   G  P+   Y+T+   L+   +   A  +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             ++L++G     IT+N++IS LC+ G + EA  +   M+     P  I+Y  +I G+CK
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              + ++ +V  AM  +   P+   Y  LI G+
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 211/450 (46%), Gaps = 61/450 (13%)

Query: 108 AYNALISGFCKANQIELANKVLDRL----RSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           AY   +   CK    +  N + D L    R   FSP V  +++++     +G+ ++A  V
Sbjct: 123 AYLNQLVDLCKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYV 178

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD + +    P++ +   L+   +  G+T  A  +  +M                   CK
Sbjct: 179 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 238

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G V +A  FV+ +E+ G +P++++Y+ L+   +++G  E  + ++  M  +G+  NVVT
Sbjct: 239 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 298

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           Y++LI   C+  K ++A  VLR  +E+  L PD  +Y  LI  YC+ G++D A+  LD M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G   ++   N+++  +CK G   +A  +  ++ D    P+  SYNT+       G  
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA----------------VG---- 425
             A  +  +ML +GIEP  +TYN+L+  LCR G  D+A                VG    
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTL 478

Query: 426 ---------------LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
                          L  D+ +  F  + I++N +I G CK  ++ E+ E+   M + GC
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            P+  TY  LI+G        +A ++  A+
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAM 568



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 207/491 (42%), Gaps = 87/491 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKY 101
           L+K   R G FD++L     M+  G  PD V  + L+   F+ E     +    +IL + 
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  +N +ISG CK  ++  A ++ D+++  G SPD +TY  +I   C    +  AF
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM----------------- 204
           KV   + R+   P++  Y  LI       +  +   LL EMG+                 
Sbjct: 563 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG----- 259
           CK+GM+ +AF     +   G   ++I  + ++  L  +G+ +E   LM +M+  G     
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 260 ---------------------------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
                                      L PN + Y+I I+ LC+ GK +DA         
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI------------------ 334
           KG  PD ++Y  LI  Y   G +D A    D M+  G +P+I                  
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802

Query: 335 -----------------VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                            V YNT++  +CK GN D A ++ +K+ + G  P+V +Y+ + +
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FR 436
            L   GD  R++ ++++M+  G++   I Y +L+    R G + + +  L DM   R   
Sbjct: 863 GLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM-QKIHKLYDMMHIRCLS 921

Query: 437 PTVISYNIIIL 447
            T IS+  + L
Sbjct: 922 TTAISHKQVDL 932



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 176/403 (43%), Gaps = 50/403 (12%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F      F  +I    + GK  E+    + M   GC PD +    LI  + +     +A
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 561

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            +V   +E+    P +  YN+LISG  K+ ++     +L  +  RG +P++VTY  +I  
Sbjct: 562 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 621

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
            C  GM++ AF  + ++  +     +I  + ++      G+ D+A  L+ +M        
Sbjct: 622 WCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681

Query: 203 -----------------------------------------GMCKKGMVGQAFQFVRSLE 221
                                                    G+CK G V  A +F   L 
Sbjct: 682 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PD  +Y  L+      G  +E  +L  EM+ RGL PN+VTY+ LI+ LC+    +
Sbjct: 742 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 801

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +     +KGL P+  +Y+ LI  YCK G +D A +  D MI +G  P +V Y+ ++
Sbjct: 802 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
              CK+G+ ++++++  ++   G    +  Y T+      SG+
Sbjct: 862 NGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 224/445 (50%), Gaps = 24/445 (5%)

Query: 61  ESMVANGCKP----DVVMCTKLIKKFFQERKSNKAVRVMEILEK---YGEPDVFAYNALI 113
           E+++A  CK     D V    ++    ++ + ++A  + E++ +    G  DV  +N+L+
Sbjct: 122 EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLV 181

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            G+CK   +E A  V +R++++G   DVV YN ++  LC  G +++A  + D + RD  +
Sbjct: 182 DGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVE 241

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P V+TYT+ I         D A  L +EM                 G+CK G   +A+  
Sbjct: 242 PNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYAL 301

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            R +E  G  P+ ++Y ML+ TL    +  E   L+ E++SRG+  +++ Y+ L+  LC+
Sbjct: 302 FREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCK 361

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +GK ++A D+ R A     TP+  +Y  LI A CK G +D A + L  M      P++V 
Sbjct: 362 EGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVT 421

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +++I+    K G   +A +   ++ + G  PNV +Y T+    +    +  AL +  EML
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +G+E ++   +SL++ L ++G +++A  L  +M         ++Y  +I G  KT  + 
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLI 481
            + +V   + EK   P+   Y + I
Sbjct: 542 AAFKVGQELTEKNLLPDAVVYNVFI 566



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 233/507 (45%), Gaps = 53/507 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    +A + +ESL  +  +V+ G   D++M T L+    +E K ++A  +    L   
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   Y  LI   CKA  ++ A +VL  +  +  SP+VVT++ +I  L  RG +  A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 162 KVFDQLLRDNCKPTVITYTILIQAT---------------ML------------------ 188
               ++      P V+TY  +I  +               ML                  
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 189 --EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G+ +KA  L  EM                 G+ K G +  AF+  + L  +   PD 
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           + YN+ +  L  +GK +E E  + EM S GL+P+ VTY+ +I++  R+GKT  A+ +L  
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K   + P+  +Y  LI    + G ++ A   L+ M S G  P  + +  +L A  +   
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
           +D  LEI E + + G   +++ YNT+   L  +G   +A+ ++ EM  +GI PD IT+N+
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI    + G +D A      M      P V ++N ++ G     RI ES  VL  M ++G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +P+  TY +L+ G G    + EA+ L
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRL 826



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 233/516 (45%), Gaps = 54/516 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           RAG+ D +   +++M  +G +P+VV  T  I ++ +    + A  + E + + G  PDV 
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS----------------- 150
             +AL+ G CK  +   A  +   +   G +P+ VTY ++I +                 
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 151 ------------------LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
                             LC  G I+ A  +F   L DN  P  +TYT+LI A    G  
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           D A ++L EM                 G+ K+G VG+A  ++R ++ RG  P+V++Y  +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +         E    +  EM+  G+E N      L++ L ++GK E A  + R   E+G+
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             D  +Y  LI    K G L  A +    +     LPD V YN  +   C  G + +A  
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
             E++   G  P+  +YNTM +A    G   +AL +++ M    I+P+ ITY++LI  L 
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF 640

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G V++A  LL +M S+ F PT +++  ++    + RR +  +E+   M   G   + T
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADIT 700

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            Y  L+  + Y G   +AM +   + S   I+ DT 
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEM-SGRGIAPDTI 735



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 217/462 (46%), Gaps = 19/462 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  +I    + G   ++  ++  M   G  P+VV    +I   F+      A+ V  E+L
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  E + F  ++L++G  K  +IE A  +   +  RG   D V Y  +I  L   G + 
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +AFKV  +L   N  P  + Y + I    + G++ +A   L+EM                
Sbjct: 542 AAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM---------------- 585

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S G +PD ++YN ++      GK  +  KL+  M    ++PN++TYS LI  L   G
Sbjct: 586 --QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAG 643

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             E A  +L      G +P + ++  ++ A  +  R DL +E  ++M++ G   DI  YN
Sbjct: 644 AVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYN 703

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++   C NG   +A+ + E++S  G  P+  ++N +    + SG    A     +ML  
Sbjct: 704 TLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYH 763

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI P+  T+N+L+  L   G + E+  +L +M+     P+ ++Y+I++ G+ K     E+
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + +   M  KG  P  +TY  LI      G  ++A EL N +
Sbjct: 824 VRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEM 865



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 210/455 (46%), Gaps = 23/455 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           + GK +++      M   G   D V  T LI   F+      A +V  E+ EK   PD  
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  I+  C   + + A   L+ ++S G  PD VTYN MI +    G    A K+ + +
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE--SRGC 225
            R + KP +ITY+ LI      G  +KA  LL+EM     G    +    R L+  S+G 
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM--SSSGFSPTSLTHRRVLQACSQGR 678

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           + D+I         L + +W         M++ GL  ++  Y+ L+  LC +G T  A+ 
Sbjct: 679 RSDLI---------LEIHEW---------MMNAGLCADITVYNTLVRVLCYNGMTRKAMV 720

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL     +G+ PD  +++ LI  + K G LD A    D M+  G  P++  +NT+L    
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
             G   ++  +  ++   G  P+  +Y+ + +      +K+ A+ +  EM+ KG  P   
Sbjct: 781 SAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVS 840

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN+LIS   + GM+ +A  L  +M++    PT  +Y+I++ G+ K R   E  + L  M
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDM 900

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            EKG  P++ T   +       G   EA  L   L
Sbjct: 901 KEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 190/403 (47%), Gaps = 35/403 (8%)

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV----ITYTILIQATMLEGQTD 193
           S D V+YN+++     +G +       + LL + CK  V    +T   ++     +G+ D
Sbjct: 100 SVDTVSYNVVMSGFSEQGGLAP-----EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVD 154

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
           +A  L + M   + G +G                DV+ +N L+     +G  E    +  
Sbjct: 155 RAAALAEVM--VRGGGIGGL--------------DVVGWNSLVDGYCKVGDMETAFAVAE 198

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            M ++G+  +VV Y+ L++ LCR G+ + A D++   K  G+ P+  +Y   I  YC+  
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRN 258

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            +D A    + M+  G LPD+V  + ++   CK+G   +A  +F ++  +G  PN  +Y 
Sbjct: 259 AVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYC 318

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L  +     +L ++ E++S+G+  D I Y +L+  LC++G +DEA  +     S 
Sbjct: 319 MLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSD 378

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P  ++Y ++I   CK   ++ + +VL+ M EK   PN  T+  +I G+   GW  +A
Sbjct: 379 NHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKA 438

Query: 494 MELANAL---------VSMHAISRDTFKRLNRTFPLLDVYKEI 527
            +    +         V+   +   +FK L +    LDVY E+
Sbjct: 439 TDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE-AALDVYHEM 480


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 209/431 (48%), Gaps = 20/431 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P+   C  ++ +  + R+     R+ E L     P+VF +N +I   CK  ++  A  + 
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLPA---PNVFTFNIVIDFLCKQGELVEARALF 222

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
            R+++ G SPDVVTYN +I      G +E    +  ++ +  C   V+TY  LI      
Sbjct: 223 VRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKF 282

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G  +KA     EM                   CK+G+V +A +    +  RG  P+  +Y
Sbjct: 283 GWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTY 342

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+      G+ ++   L+ EM+ +GL PNVVTY++++  LC++GK   A DVL   + 
Sbjct: 343 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+  +   Y  LI  +  +   + A++ L+ M + G   D+  Y T++   CK    D+
Sbjct: 403 AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDE 462

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +  K+ D G  PN   Y T+  A + +G +  A+ ++ ++   G++P+ +TY +LI 
Sbjct: 463 AKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALID 522

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC+ G + EA+     M      P V  Y  +I GFCK   +++++ ++  M +KG   
Sbjct: 523 GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSL 582

Query: 473 NETTYVLLIEG 483
           ++  Y  LI+G
Sbjct: 583 DKVVYTSLIDG 593



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 218/473 (46%), Gaps = 18/473 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+  E+      M A GC PDVV    LI  + +  +  +   ++  + K G   DV 
Sbjct: 211 KQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVV 270

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+ F K   IE A      ++  G   +VVT +  + + C  G++  A K+F Q+
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P   TYT L+  T   G+ D A+ LLDEM                 G+CK+G V
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +  +E  G + + + Y  L+         E    L+ EM ++G+E +V  Y  L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  K ++A  +L    + GL P+   Y  ++ A+ K G+   A+  L  +   G 
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P++V Y  ++   CK G+  +A+  F+K+ ++G  PNV  Y T+       G   +A+ 
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++EM+ KG+  D++ Y SLI    + G +  A  L   M  T  +  +  Y   I GFC
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFC 630

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
               + E+  VL+ M   G  P++T Y  LI      G   EA  L N + S+
Sbjct: 631 NMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESV 683



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 22/391 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+    N ++    +  Q  L  ++ + L +    P+V T+NI+I  LC +G +  A  +
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARAL 221

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++    C P V+TY  LI                D  G C  G + +    V  +   
Sbjct: 222 FVRMKAMGCSPDVVTYNSLI----------------DGYGKC--GELEEVELLVSEMRKS 263

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC  DV++YN L+      G  E+      EM   G+  NVVT S  + + C++G   +A
Sbjct: 264 GCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREA 323

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +    + +G+ P+ ++Y  L+   CK GRLD AI  LD M+  G +P++V Y  ++  
Sbjct: 324 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 383

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G    A ++   +   G   N   Y T+    + + +  RAL +++EM +KG+E D
Sbjct: 384 LCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELD 443

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
              Y +LI  LC+   +DEA  LL  M+    RP  + Y  I+  F K  + +E++ +L 
Sbjct: 444 VSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            + + G +PN  TY  LI+G+   G   EA+
Sbjct: 504 KIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R   P+V  +  L+S L   G  +DAV  L   ++  + P+  + + ++    ++ +  L
Sbjct: 129 RSALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL 186

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                +++ +    P++  +N ++   CK G   +A  +F ++  +GC P+V +YN++  
Sbjct: 187 VRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLID 242

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                G+      ++SEM   G   D +TYN+LI+C  + G +++A     +M+      
Sbjct: 243 GYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V++ +  +  FCK   + E++++ A M  +G  PNE TY  L++G    G   +A+ L 
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 498 NALV 501
           + +V
Sbjct: 363 DEMV 366



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 28/234 (11%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPNT +         +  ++   F+AGK  E++  +  +  +G +P+VV    LI    +
Sbjct: 476 RPNTVI---------YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCK 526

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
                +A+   + + + G +P+V  Y  LI GFCK   +  A  +++ +  +G S D V 
Sbjct: 527 AGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVV 586

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           Y  +I     +G ++ AF +  +++    +  +  YT  I                   G
Sbjct: 587 YTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFIS------------------G 628

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
            C   M+ +A   +  +   G  PD  +YN L+R    +G  EE   L  EM S
Sbjct: 629 FCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 206/425 (48%), Gaps = 17/425 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           MEI       D F Y   I    K   +++  + LD +R RG  P+V  YN++IG LC  
Sbjct: 165 MEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCRE 224

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
             I  A K+FD++   N   +++TY  LI      G+ D A K+ + M            
Sbjct: 225 KRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITF 284

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK   + +A   ++ +E  G  PD  +Y++L   LL         +L  +   
Sbjct: 285 NSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATE 344

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +G+  N  T SIL++ LC+ GK E A ++L+   E GL  D   Y+  ++ YC+ G ++ 
Sbjct: 345 KGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNK 404

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           AI  ++ M S G  P+ + +N+++  FC     D+A E  +K+++ G  P+V +YNT+  
Sbjct: 405 AILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLID 464

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                    R   ++ +M   G++P+ ++Y SLI+CLC+DG + EA  +L DM      P
Sbjct: 465 GYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP 524

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
               YN++I G C   ++ +++     M      P   TY +LI+G+   G   EA +  
Sbjct: 525 NAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFL 584

Query: 498 NALVS 502
             + S
Sbjct: 585 TQITS 589



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 215/467 (46%), Gaps = 18/467 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           + K I+ + +       + F++SM   G +P+V +   LI    +E++   A ++  E+ 
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMC 238

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                  +  YN LI G+CK  +++ A K+ +R++ +  +P+++T+N ++  LC    ++
Sbjct: 239 NINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMK 298

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  ++  +   P   TY+IL    +     + AM+L ++                 
Sbjct: 299 EARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILL 358

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK+G V +A + ++     G   D + YN  +     +G   +    +  M S GL 
Sbjct: 359 NGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLR 418

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN +T++ LI   C   + + A + ++   EKG+TP   +Y+ LI  Y K    D   + 
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M   G  P++V+Y +++   CK+G   +A  +   +   G  PN   YN +      
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    AL    EM+   I P  +TYN LI  LC+ G + EA   L  + S+   P VI+
Sbjct: 539 VGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           YN +I G+     +++ + +   M   G KP   TY  LI G    G
Sbjct: 599 YNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG 645



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 211/453 (46%), Gaps = 34/453 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK +++   ++    NG   D V+    +  + +    NKA+  +E +E +G  P+  
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI---GSLCSRGMIESAFKVF 164
            +N+LI  FC   +++ A + + ++  +G +P V TYN +I   G LC+    +  F++ 
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT---FDRCFQIL 479

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           +Q+     KP V++Y  LI                    +CK G + +A   +R +  RG
Sbjct: 480 EQMEEIGVKPNVVSYGSLINC------------------LCKDGKILEAEIVLRDMICRG 521

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+   YNML+     +GK ++  +   EM+   + P +VTY++LI  LC+ GK  +A 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           D L      G +PD  +Y+ LIS Y   G +   +   + M + G  P +  Y+ +++  
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGC 641

Query: 345 CKNGNADQALEIFEKLSD----VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
            K G     +E+ EKL +    +   P+   YN M       G+  +A  +   ML +GI
Sbjct: 642 SKEG-----IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGI 696

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD++TYNSLI    R+G +     L+ +M++    P   +Y+I++ G C  +  + +  
Sbjct: 697 HPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYV 756

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
               M E    PN +    L  G+   G   E 
Sbjct: 757 WYREMVENNFLPNASICNELTAGLEQEGRLQEV 789



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 53/396 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI +     + D++  +++ M   G  P V     LI  + +    ++  +++E +E
Sbjct: 424 FNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +P+V +Y +LI+  CK  +I  A  VL  +  RG  P+   YN++I   C  G ++
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A + FD+++R    PT++TY +LI                   G+CKKG + +A  F+ 
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLID------------------GLCKKGKLTEAEDFLT 585

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKW------------------------------EEG 248
            + S G  PDVI+YN L+    N G                                +EG
Sbjct: 586 QITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG 645

Query: 249 ----EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
               EKL  EM+   L P+ V Y+ +I      G T+ A  + +   ++G+ PD  +Y+ 
Sbjct: 646 IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNS 705

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI  + ++G+L    + ++ M +    P    Y+ ++   C   +   A   + ++ +  
Sbjct: 706 LILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
             PN S  N + + L   G       + SEM  KGI
Sbjct: 766 FLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 5/229 (2%)

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
            VD+    +  G   D + Y   I A  K   L + +EFLD M   G  P++  YN ++ 
Sbjct: 160 VVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIG 219

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             C+      A ++F+++ ++    ++ +YNT+       G+   A  M   M  K + P
Sbjct: 220 GLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAP 279

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + IT+NSL+S LC+   + EA  LL +ME   F P   +Y+I+  G  +    N ++E+ 
Sbjct: 280 NIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELY 339

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALVSMHAI 506
               EKG + N  T  +L+ G+   G   +A E+      N LV+   I
Sbjct: 340 EQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 70/351 (19%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  M+ +A +    +   G  P ++S ++L   L+N  ++ +   L  E+ + G   + 
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+  I +  +    +  ++ L + +++G+ P+ + Y+ LI   C++ R+  A +  D 
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M +   +  IV YNT++  +CK G  D A ++ E++ +    PN+ ++N++ S L     
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 385 KIRALGMISEMLSKGIEPDEITY----NSLISC--------------------------- 413
              A  ++ EM   G  PD  TY    + L+ C                           
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356

Query: 414 ----LCRDGMVDEAV---------GLLVD--------------------------MESTR 434
               LC+ G V++A          GL+ D                          MES  
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            RP  I++N +I  FC  + ++++ E +  M EKG  P+  TY  LI+G G
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYG 467



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 1/224 (0%)

Query: 262 PNVVTYS-ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           P  +T S +L+S  C+     +AV++    +  G  P   S   L S    + +    ++
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               + + G   D   Y   + A  K  N    +E  + +   G  PNV  YN +   L 
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
                  A  M  EM +  +    +TYN+LI   C+ G +D A  +   M+     P +I
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++N ++ G CK R++ E+  +L  M   G  P+  TY +L +G+
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGL 326


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 234/492 (47%), Gaps = 56/492 (11%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A  +P T+          F  LI      G  + +    + M   GCKP+      L++ 
Sbjct: 147 ARVKPQTY---------TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 82  FFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           + +    +  + +++ +   G  P+  AYN +IS  C   Q   A K+++++R  G SPD
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAM 196
           +VT+N  I +LC  G I  A ++F  +  D      KP  +TY ++++    EG  ++A 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            + D M            +   +L  R       SYN+ +  L+  GK  E   ++ EM 
Sbjct: 318 AIFDSM------------KNSETLSLR-------SYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            + ++PN+ +Y+IL+  LC+ G   DA  +L   +E G+ PD  +Y  L+  YC+ G++ 
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  MI  GC P++   N +L +  K G A +A ++ + +++ G   +  + NTM 
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 377 SALWSSGDKIRALGMISEMLSKGIE-----------------------PDEITYNSLISC 413
           + L  +G+  +A+ ++S M ++G                         PD ITY ++I  
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGG 538

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC+ G VDEA   L++M   +  P  + ++  I  +CK  +++ +  VL  M +KGC  +
Sbjct: 539 LCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKS 598

Query: 474 ETTYVLLIEGIG 485
             TY  LI+G+G
Sbjct: 599 LRTYNSLIQGLG 610



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 239/540 (44%), Gaps = 88/540 (16%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L++   RAG     +  ++ M ++G  P+ V    +I     E ++ +A +++E + + G
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLR---SRGF-SPDVVTYNIMIGSLCSRGMI 157
             PD+  +N  I+  CK+ QI  A+++   ++     G   P+ VTYN+M+   CS GM 
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMF 313

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A  +FD + +++   ++ +Y I +   +  G+  +A  +L+EM               
Sbjct: 314 EEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK GM   A   +  +   G  PD ++Y+ LL      GK  E   ++ EMI  G 
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGC 432

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PN+ T +IL+ SL ++G+  +A D+L+   E+G   D  + + +I+  CK G LD AIE
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIE 492

Query: 321 FLDYMISDG-----------------------CLPDIVNYNTILAAFCKNGNADQA---- 353
            +  M + G                       CLPD + Y TI+   CK G  D+A    
Sbjct: 493 IVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKL 552

Query: 354 -------------------------------LEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
                                            + +++   GC  ++ +YN++   L S 
Sbjct: 553 LEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSE 612

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                  G++ EM  +GI P+  TYN++ISCL   G + +A  LL +M      P + ++
Sbjct: 613 NQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTF 672

Query: 443 NIIILGF---CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            I+I  F   C      E  E+  ++    C   E+ Y  +   +  GG   +A EL  A
Sbjct: 673 RILIGAFFKACDFGAAQELFEIALSL----CGHKESLYSFMFNELLAGGETLKAKELFEA 728



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 195/456 (42%), Gaps = 78/456 (17%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  YN L     K ++++    +   +      P   T+N++I +LC  G +E+A +V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD++    CKP   +  IL++     G     + LLDEM                  +C 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---SRGL-EP 262
           +G   +A + V  +   G  PD++++N  +  L   G+  E  ++  +M      GL +P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 263 NVVTYSILISSLCRDGKTEDA----------------------VDVLRAAK--------- 291
           N VTY++++   C +G  E+A                      + ++R+ K         
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILN 355

Query: 292 ---EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              EK + P+ YSY+ L+   CK G    A   L  M   G  PD V Y+T+L  +C+ G
Sbjct: 356 EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A  +  ++  VGC PN+ + N +  +LW  G    A  ++  M  +G   D +T N
Sbjct: 416 KILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCN 475

Query: 409 SLISCLCRDGMVDEAVGLLVDM-----------------------ESTRFRPTVISYNII 445
           ++I+ LC+ G +D+A+ ++  M                          +  P  I+Y  I
Sbjct: 476 TMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATI 535

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           I G CK  R++E+ + L  M  K   P+   +   I
Sbjct: 536 IGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 76/426 (17%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ EK  +P++++YN L+ G CK      A  +L  +R  G +PD VTY+ ++   C RG
Sbjct: 356 EMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRG 415

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            I  A  V  ++++  C P + T  IL+ +   EG+  +A  LL  M             
Sbjct: 416 KILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCN 475

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNML 235
               G+CK G + +A + V  + +RG                       C PD I+Y  +
Sbjct: 476 TMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATI 535

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA----- 290
           +  L  +G+ +E +K + EMI + L P+ + +   I + C+ GK   A  VL+       
Sbjct: 536 IGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGC 595

Query: 291 ------------------------------KEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
                                         KE+G+ P+ Y+Y+ +IS   + G+L  A  
Sbjct: 596 NKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATC 655

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            LD M+  G  P+I  +  ++ AF K  +   A E+FE    + C    S Y+ MF+ L 
Sbjct: 656 LLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELL 714

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           + G+ ++A  +    L + +      Y  LI  LC+DG +D+A  +L  M   ++     
Sbjct: 715 AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPA 774

Query: 441 SYNIII 446
           S+  +I
Sbjct: 775 SFMPVI 780



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 163/309 (52%), Gaps = 8/309 (2%)

Query: 208 GMVGQAFQFVRSLESRGCQ--PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           G++  A    RSL  R     P +  YN+L R  L   + +    L  +M    ++P   
Sbjct: 95  GLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTY 154

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+++LIS+LC  G  E+A +V     EKG  P+ +S   L+  YC+ G     I+ LD M
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            S G LP+ V YNT++++ C  G   +A ++ EK+ +VG  P++ ++N   +AL  SG  
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 386 IRALGMISEML---SKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + A  +  +M      G+ +P+ +TYN ++   C +GM +EA  +   M+++    ++ S
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRS 333

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           YNI +LG  ++ ++ E+  +L  M EK  KPN  +Y +L+ G+   G  ++A  +   L+
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL-GLM 392

Query: 502 SMHAISRDT 510
               ++ DT
Sbjct: 393 RESGVAPDT 401



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 76/413 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           R GK  E+ Y +  M+  GC P++  C  L+   ++E ++++A  +++++ + G   D  
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNV 472

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFS-----------------------PDVVTY 144
             N +I+G CKA  ++ A +++  + +RG +                       PD +TY
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             +IG LC  G ++ A K   +++     P  + +   I                     
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI------------------YNY 574

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G +  AF+ ++ +E +GC   + +YN L++ L +  +  E   LM EM  RG+ PNV
Sbjct: 575 CKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNV 634

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ +IS L   GK +DA  +L    +KG++P+ Y++  LI A+ K      A E  + 
Sbjct: 635 YTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEI 694

Query: 325 MIS-----DGCLPDIVN-----------------------------YNTILAAFCKNGNA 350
            +S     +     + N                             Y  ++   CK+G  
Sbjct: 695 ALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           D A  I  K+ D     + +S+  +   L   G K  A      M+    E D
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 29/321 (9%)

Query: 16  VRVSSSAETRPNTHLLSFDVKET---------QFMKLIKRSFRAGKFDESLYFIESMVAN 66
            R S+S     N+ +  FD++            +  +I    + G+ DE+   +  M+  
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGK 558

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
              PD ++    I  + ++ K + A RV++ +EK G    +  YN+LI G    NQI   
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEI 618

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             ++D ++ RG  P+V TYN +I  L   G ++ A  + D++L+    P + T+ ILI A
Sbjct: 619 YGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGA 678

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                   KA         C  G   + F+   SL    C      Y+ +   LL  G+ 
Sbjct: 679 FF------KA---------CDFGAAQELFEIALSL----CGHKESLYSFMFNELLAGGET 719

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            + ++L    + R L      Y  LI  LC+DGK +DA  +L    +K  + D  S+ P+
Sbjct: 720 LKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPV 779

Query: 306 ISAYCKDGRLDLAIEFLDYMI 326
           I    K G    A EF + M+
Sbjct: 780 IDELGKRGSKHAADEFAERMM 800


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 209/425 (49%), Gaps = 20/425 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVMEIL 98
           F  L+    R GK +E    + +M   G   D   CT +++   ++ R  + +     +L
Sbjct: 76  FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P+V  Y A I G CK   ++ A  VL+ +  RG  P+V T+  +I  LC  G  E
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 195

Query: 159 SAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            AF++F +L++ +  KP V TYT++I                   G C++G + +A   +
Sbjct: 196 RAFRLFLKLIKSSSYKPNVHTYTVMIG------------------GYCREGKLARAEMLL 237

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +  +G +P+  +Y  L+      G ++   +LM +M   G  PN+ TY+ +I   C+ 
Sbjct: 238 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 297

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK ++A  VLR A  +GL  D  +Y  LI+ +CK G +  A++  D M+ +GC PDI  Y
Sbjct: 298 GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAY 357

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            ++++ +C+    +++ + F+K   +G  P   +Y +M +     G    AL +   M+ 
Sbjct: 358 TSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQ 417

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G   D ITY +LIS LC++  ++EA  L   M   R  P  ++   +   +C+  + + 
Sbjct: 418 NGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSI 477

Query: 458 SIEVL 462
           ++ VL
Sbjct: 478 AVSVL 482



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 18/391 (4%)

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +++ F +A ++  A  ++  +RS G    V T N ++      G    A KVFD + R 
Sbjct: 8   GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 67

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
              P    +  L+     EG+ ++   LL  M                  +C+KG     
Sbjct: 68  GVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +F R +   G  P+V++Y   +  L      ++   ++ EM+ RGL+PNV T++ LI  
Sbjct: 128 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187

Query: 274 LCRDGKTEDAVDV-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           LC+ G TE A  + L+  K     P+ ++Y  +I  YC++G+L  A   L  M+  G  P
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 247

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +   Y T++   CK G+ D+A E+  K+   G  PN+ +YN +       G    A  ++
Sbjct: 248 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 307

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
               S+G++ D+ITY  LI+  C+ G +  A+ L   M      P + +Y  +I  +C+ 
Sbjct: 308 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 367

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           R++ ES +        G  P + TY  +I G
Sbjct: 368 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 36/330 (10%)

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G + +A   V  + S G    V + N +LR  L  G +    K+   M   G+ P    +
Sbjct: 17  GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGF 76

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             L+   CR+GK E+   +L A    G + D  +   ++ + C+ GR     EF   M+ 
Sbjct: 77  GALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 136

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL----WS-- 381
            G  P++VNY   +   CK     QA  + E++   G  PNV ++ T+   L    W+  
Sbjct: 137 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 196

Query: 382 ------------------------------SGDKIRALGMISEMLSKGIEPDEITYNSLI 411
                                          G   RA  ++  M+ +G++P+  TY +LI
Sbjct: 197 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 256

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C+ G  D A  L+  M+   F P + +YN +I GFCK  +I E+ +VL     +G K
Sbjct: 257 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 316

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ TY +LI      G    A++L + +V
Sbjct: 317 FDKITYTILITEHCKQGHITYALDLFDRMV 346



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 83/197 (42%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +++A+ + GRL  A + +  M S G    +   N +L    + G+   A ++F+ ++  G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P    +  +       G       +++ M   G   D  T   ++  LC  G   +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                M  T   P V++Y   I G CK R + ++  VL  M  +G KPN  T+  LI+G+
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 485 GYGGWRAEAMELANALV 501
              GW   A  L   L+
Sbjct: 189 CKIGWTERAFRLFLKLI 205


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 231/457 (50%), Gaps = 18/457 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           L+K     GK  ++L   + M  +G + D+++   LI    + R++ +AV +   +L + 
Sbjct: 15  LVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEI 74

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              + F Y  +I   CK        K+   + + G  P+V+ Y+ +I  LC  G +  A 
Sbjct: 75  CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAV 134

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +FD+++    K  VITY  LI A+   G   +A +   +M                  +
Sbjct: 135 NLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHL 194

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            KKG V +A++    +  +G  P++++YN LL  L    + +   +L   M+ RG++ +V
Sbjct: 195 SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDV 254

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           ++Y+ LI+  C  GKTE+A+ + R  + + LTP   +Y  L+ A  ++GR+  A E  + 
Sbjct: 255 ISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNN 314

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P +  Y  +L   CKNG  ++A+++F  L  +   P++  Y+ +   ++ +  
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+ +  E+ + G+ P+ +TYN +I+ LC++G + EA  L V ME +      IS+N 
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           II GF +  ++ +++E L  M EK   PN++  ++L+
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 221/432 (51%), Gaps = 19/432 (4%)

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIEL 124
           +G +P++V  + L+K    E K   A+ + + + + G + D+  Y  LI+   K  Q   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A ++  R+ S   S +  TY ++I SLC  G+     K+F +++     P VI Y+ LI 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G+C+ G + +A      + S+G + +VI+YN L+      G 
Sbjct: 123 ------------------GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           W+E  +  ++M+  G+ P+VVT++ LI  L + GK ++A  +     ++G  P+  +Y+ 
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L++  C   ++D A+   + M+  G   D+++YNT++  +C +G  ++A+ +F K+    
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P++++Y  +  AL+ +G    A  + + M   G  P   TY  L+  LC++G ++EA+
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +   ++S +++P++  Y+I+I G  + RR   ++E+   +   G  PN  TY ++I G+
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 485 GYGGWRAEAMEL 496
              G   EA  L
Sbjct: 405 CKEGKLLEAERL 416



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 187/368 (50%), Gaps = 18/368 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ P++VT + ++  +C  G +  A ++FD++ R   +  ++ Y  LI A     Q  +A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++L                   R + S  C  +  +Y +++ +L   G   +G K+  EM
Sbjct: 64  VELH------------------RRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREM 105

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           I+ G+ PNV+ YS LI+ LCR GK  +AV++      +G+  +  +Y+ LI A C+ G  
Sbjct: 106 INMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLW 165

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A      M+ +G LPD+V + T++    K G   +A +IFE +   G  PN+ +YN++
Sbjct: 166 KEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSL 225

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            + L        A+ +   M+ +GI+ D I+YN+LI+  C  G  +EA+ L   M+    
Sbjct: 226 LNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEEL 285

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P++ +Y I++    +  RI  + E+   M   G  P+  TY +L++G+   G   EA++
Sbjct: 286 TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAID 345

Query: 496 LANALVSM 503
           +  +L S+
Sbjct: 346 VFRSLKSI 353



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 177/386 (45%), Gaps = 18/386 (4%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           + L     M+  G  P+V++ + LI    +  K  +AV + + +   G + +V  YN+LI
Sbjct: 97  KGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLI 156

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
              C+    + A +   ++   G  PDVVT+  +I  L  +G ++ A+K+F+ +++    
Sbjct: 157 HASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEA 216

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
           P ++TY  L+    L  Q D A++L + M                 G C  G   +A   
Sbjct: 217 PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTL 276

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            R ++     P + +Y +LL+ L   G+    ++L   M   G  P++ TY++L+  LC+
Sbjct: 277 FRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCK 336

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G  E+A+DV R+ K     P    Y  LI    +  R + A+E  D + + G +P+IV 
Sbjct: 337 NGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVT 396

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   CK G   +A  +F ++ + GC  +  S+N +           +A+  +  M 
Sbjct: 397 YNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDE 422
            K   P++     L++    D    E
Sbjct: 457 EKNFSPNDSVTLMLVNLYAADAQSSE 482



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 151/295 (51%), Gaps = 19/295 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK  E+    E M+  G  P++V    L+       + + AVR+ E++ 
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G + DV +YN LI+G+C + + E A  +  +++    +P + TY I++ +L   G I 
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A ++F+ +      P++ TYT+L+                   G+CK G + +A    R
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLD------------------GLCKNGCIEEAIDVFR 348

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           SL+S   +P +  Y++L+  +    +WE   ++  E+ + GL PN+VTY+I+I+ LC++G
Sbjct: 349 SLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEG 408

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           K  +A  +    +E G   D  S++ +I  + ++ ++  A+EFL  M      P+
Sbjct: 409 KLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 104/210 (49%)

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + G  P+  +   L+   C +G++  A+E  D M   G   DI+ Y  ++ A  K   A 
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+E+  ++    C  N  +Y  +  +L   G  I+ L M  EM++ GI P+ I Y+SLI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LCR G + EAV L  +M S   +  VI+YN +I   C+     E+    + M  +G  
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P+  T+  LI+ +   G   EA ++   ++
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMI 211



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  P++V  +T++   C  G    ALE+F+K++  G   ++  Y  + +AL  +   
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            RA+ +   MLS+    +  TY  +I  LC+DG+  + + +  +M +    P VI Y+ +
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG-IGYGGWR 490
           I G C+  ++ E++ +   M  +G K N  TY  LI     +G W+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWK 166


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 229/472 (48%), Gaps = 22/472 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            F V+   F  L+K      +  +++   +  M    C PDV  CT L+K    E +S +
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQE 176

Query: 91  AVRVMEILEKY----GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
           A+ +  ++         PDV +Y  +I+GF K      A      +  R  SPDVVTY+ 
Sbjct: 177 ALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSS 236

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
           +I +LC    ++ A +V   ++++   P   TYT ++      GQ  +A+  L +     
Sbjct: 237 IIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKK----- 291

Query: 207 KGMVGQAFQFVRS--LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                     VRS  +E  G +PD+ +Y  LL+     G       L+  M+  G+ P+ 
Sbjct: 292 ----------VRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDH 341

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ILI +  + GK ++A+ V    +++GL PDA +Y  +I   CK GR++ A+ + + 
Sbjct: 342 YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ 401

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MI +G  P  + YN+++   C     ++A E+  ++ D G   N   +N++  +    G 
Sbjct: 402 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 461

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            I +  +   M+  G++PD ITY++LI   C  G +DEA+ LL  M S   +P  ++Y  
Sbjct: 462 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRT 521

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I G+CK  R+ +++ +   M   G  P+  TY ++++G+      A A EL
Sbjct: 522 LINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 573



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 220/468 (47%), Gaps = 23/468 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+ G   ++      M+     PDVV  + +I    + +  +KA+ V+  + 
Sbjct: 199 YTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV 258

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-----FSPDVVTYNIMIGSLCS 153
           K G  P+   Y +++ G+C + Q + A   L ++RS G       PD+ TY  ++    +
Sbjct: 259 KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYAT 318

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG---------- 203
           +G +     + D ++R+   P    Y ILI A   +G+ D+AM +  +M           
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378

Query: 204 -------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                  +CK G V  A  +   +   G  P  I YN L+  L    KWE  E+L+ EM+
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 438

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            RG+  N + ++ +I S C++G+  ++  +       G+ PD  +Y  LI  YC  G++D
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++ L  M+S G  P+ V Y T++  +CK      AL +F+++   G  P++ +YN + 
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L+ +     A  +   +   G + +  TYN ++  LC++ + D+A+ +  ++     +
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               ++NI+I    K  R  E+ ++  A    G  PN  TY L+ E I
Sbjct: 619 LEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENI 666



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 214/461 (46%), Gaps = 23/461 (4%)

Query: 65  ANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKANQIE 123
             G  PDVV  T +I  FF+E  S KA     E+L++   PDV  Y+++I+  CK   ++
Sbjct: 189 GGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD 248

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF-----DQLLRDNCKPTVIT 178
            A +VL  +   G  P+  TY  ++   CS G  + A         D +  D  +P + T
Sbjct: 249 KAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIAT 308

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLE 221
           Y  L+Q    +G       LLD M                    K+G V +A      + 
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMR 368

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PD ++Y  ++  L   G+ E+      +MI  GL P  + Y+ LI  LC   K E
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 428

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A +++    ++G+  +   ++ +I ++CK+GR+  + +  D M+  G  PDI+ Y+T++
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             +C  G  D+A+++   +  VG  PN  +Y T+ +          AL +  EM S G+ 
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD ITYN ++  L +      A  L V +  +  +  + +YNII+ G CK +  ++++ +
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              +     K    T+ ++I+ +   G   EA +L  A  S
Sbjct: 609 FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSS 649



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 26/426 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C+A++++L    L  +  +GF  + +T+  ++  LC+      A   
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------- 202
           V  ++   +C P V + TIL++    E ++ +A++L   M                    
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G  K+G  G+A+     +  R   PDV++Y+ ++  L      ++  +++T M+  G+ P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-----LTPDAYSYDPLISAYCKDGRLDL 317
           N  TY+ ++   C  G+ ++A+  L+  +  G     L PD  +Y  L+  Y   G L  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
               LD M+ +G  PD   YN ++ A+ K G  D+A+ +F K+   G  P+  +Y  +  
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  SG    A+    +M+ +G+ P  I YNSLI  LC     + A  L+++M       
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             I +N II   CK  R+ ES ++   M   G KP+  TY  LI+G    G   EAM+L 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 498 NALVSM 503
           + +VS+
Sbjct: 505 SGMVSV 510



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 169/367 (46%), Gaps = 21/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK DE++     M   G  PD V    +I    +  +   A+   E +   G  P   
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G C  N+ E A +++  +  RG   + + +N +I S C  G +  + K+FD +
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +R   KP +ITY+ LI    L G+ D+AMKLL  M                 G CK   +
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G A    + +ES G  PD+I+YN++L+ L    +    ++L   +   G +  + TY+I+
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +  LC++  T+DA+ + +      L  +A +++ +I A  K GR   A +      S+G 
Sbjct: 593 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA-- 388
           +P+   Y  +       G  ++  ++F  + D GC  +    N +   L   G+  RA  
Sbjct: 653 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 712

Query: 389 -LGMISE 394
            L MI E
Sbjct: 713 YLSMIDE 719



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 56/307 (18%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
           E+   +  E++ RG   ++   +  ++ + R           R A+     +TP  ++Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDG---------------------------------- 329
            LI   C+  RLDL    L  ++  G                                  
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 330 --CLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
             C+PD+ +   +L   C    + +ALE+   ++D    G  P+V SY T+ +  +  GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A     EML + I PD +TY+S+I+ LC+   +D+A+ +L  M      P   +Y  
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNE-----TTYVLLIEGIGYGGWRAEAMELANA 499
           I+ G+C + +  E+I  L  +   G +P+       TY  L++G    G          A
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKG----------A 321

Query: 500 LVSMHAI 506
           LV MHA+
Sbjct: 322 LVGMHAL 328



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 18/243 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AGK DE++  +  MV+ G KP+ V    LI  + +  +   A+ + + +E  G  PD+  
Sbjct: 494 AGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIIT 553

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN ++ G  +  +   A ++  R+   G   ++ TYNI++  LC   + + A ++F  L 
Sbjct: 554 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLC 613

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-- 214
             + K    T+ I+I A +  G+  +A  L                 +  + ++GQ    
Sbjct: 614 LMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 673

Query: 215 ---QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
              Q   S+E  GC  D    N ++R LL  G+       ++ +  +       T S+ I
Sbjct: 674 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 733

Query: 272 SSL 274
             L
Sbjct: 734 DLL 736


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 211/438 (48%), Gaps = 18/438 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  DE+L F + M  +G +PDVV    L K F      + A +V++ +   G  PD+  
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI G C+   IE A K+     SRGF  +V+ YN+++  LC  G IE A  +FD++ 
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P  I Y+ILI     EG   +A +L ++M                 G+ K G + 
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  +  +        DV+ YN+++   + +    E  +L  +MI RG+ P+VVT++ LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  CR G   +A  +L   + KGL P   +Y  L++AYC+ G +     FL  M ++  +
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  V Y  ++   C+     ++L++ E +   G  P+  +YNT+        +  +AL +
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            + ML    +P ++TY  LI+ LC  G + +   ++V +E         +Y  II   C 
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738

Query: 452 TRRINESIEVLAAMFEKG 469
             ++++++     M  KG
Sbjct: 739 KGQVSKALGYFNQMLAKG 756



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 19/446 (4%)

Query: 75  CTK--LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
           CT   LI    ++ K   A+  +    K   P + + N ++S FCK   I++A      +
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLM 297

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
              G   D  +YNI++  LC  G ++ A    D + +   +P V+TY  L +  +L G  
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             A K++ +M                 G C+ G + +A +  +   SRG + +VI YNML
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L  L  +G+ EE   L  EM +  LEP+ + YSILI  LC++G  + A  +    + K  
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P  ++   ++    K+G +  A  + D       + D+V YN ++  + +     +A++
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           ++ K+ + G  P+V ++NT+ +     GD + A  M+  +  KG+ P  +TY +L++  C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G + E    L +ME+    PT ++Y ++I G C+  +++ES+++L  M+ KG  P+  
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY  +I+    G    +A++L N ++
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMML 683



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 27/292 (9%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ +M     + +V TY+ L+ ++     T+   DV    K  G      +   LI   C
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +  +L+ AI FL +  +    P IV+ NTI++ FCK G  D A   F  +   G   +  
Sbjct: 249 EQSKLEDAISFL-HDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSF 307

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           SYN +   L  +G    ALG   +M   G+EPD +TYN+L       G++  A  ++  M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P +++Y  +I G C+   I E++++      +G K N   Y +L+  +   G  
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 491 AEAMELANAL-------------VSMHAISRDTF----------KRLNRTFP 519
            EA+ L + +             + +H + ++ F           RL R FP
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFP 479



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 19/193 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LIK   R  K  ESL  +E M A G  PD V    +I+ F + ++  KA+++  
Sbjct: 621 HVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           ++  +  +P    Y  LI+  C    ++  ++++  +  R  +    TY  +I + C++G
Sbjct: 681 MMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKG 740

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A   F+Q+L      ++  Y+ +I                    +CK+G++ +A  
Sbjct: 741 QVSKALGYFNQMLAKGFVISIRDYSAVINR------------------LCKRGLITEAKY 782

Query: 216 FVRSLESRGCQPD 228
           F   + S G  PD
Sbjct: 783 FFVMMLSEGVTPD 795


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 241/542 (44%), Gaps = 66/542 (12%)

Query: 7   CINPKSNERVRV---SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C + +SNE   +    S AE +PN            +  LI    R G  DE+   I+ M
Sbjct: 303 CKSRRSNEAKALLDEMSCAELKPNV---------VVYANLIDGFMREGNADEAFKMIKEM 353

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQI 122
           VA G +P+ +    L++   +  + ++A  ++ +++     PD   YN +I G  + +  
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + A ++L  + + G SP+V TY+IMI  LC  G  E A  + +++     KP    Y  L
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 473

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I     EG    A ++ D+M                 G+ K G V ++ ++   ++ RG 
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV-------------------- 265
            P+  +Y+ L+   L  G  E  E+L+  M+  GL+PN V                    
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 593

Query: 266 ---------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
                           Y ILI +L   G  E A  VL   ++ G  PD + Y  LIS  C
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 653

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K    + A   LD M   G  P+IV YN ++   CK+G+   A  +F  +   G  PN  
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 713

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y ++       GD   A  + +EML+ GI PD   Y+ L +     G +++A+ L+ +M
Sbjct: 714 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
              R   ++ S+N ++ GFCK  ++ E++++L  +  +G  PN  T   +I G+   G  
Sbjct: 774 -FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832

Query: 491 AE 492
           +E
Sbjct: 833 SE 834



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 235/499 (47%), Gaps = 55/499 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           R+G  +E+  F + M   G  PD      LI    + R+SN+A  +++ +     +P+V 
Sbjct: 269 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 328

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI GF +    + A K++  + + G  P+ +TY+ ++  LC  G ++ A  +  Q+
Sbjct: 329 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 388

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +RD+ +P  ITY ++I+          A +LL EM                  E+ G  P
Sbjct: 389 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM------------------ENAGISP 430

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V +Y++++  L   G+ E+   L+ EM ++GL+PN   Y+ LIS  CR+G    A ++ 
Sbjct: 431 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 490

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +  + PD Y Y+ LI    K GR++ + ++   M   G LP+   Y+ ++  + KN
Sbjct: 491 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 550

Query: 348 GNADQALEIFEKLSDVGCPPN-------------------VSS----------------Y 372
           G+ + A ++ +++ D G  PN                   VSS                Y
Sbjct: 551 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 610

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             +   L SSG+   A  ++S +   G  PD   Y+SLIS LC+    ++A G+L +M  
Sbjct: 611 GILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 670

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P ++ YN +I G CK+  I+ +  V  ++  KG  PN  TY  LI+G    G  + 
Sbjct: 671 KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISN 730

Query: 493 AMELANALVSMHAISRDTF 511
           A  L N +++   I+ D F
Sbjct: 731 AFYLYNEMLAT-GITPDAF 748



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 222/482 (46%), Gaps = 89/482 (18%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF------- 161
           + + +  +CK  + + A KVL  +R RG   + VTYN++I  LC  G +E AF       
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 162 ----------------------------KVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
                                        + D++     KP V+ Y  LI   M EG  D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +A K++ EM                 G+CK G + +A   ++ +     +PD I+YN+++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                    ++  +L++EM + G+ PNV TYSI+I  LC+ G+ E A D+L     KGL 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+A+ Y PLIS YC++G + LA E  D M     LPD+  YN+++    K G  +++ + 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F ++ + G  PN  +Y+ +      +GD   A  ++  ML  G++P+++ Y  L+    +
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 417 D-----------GMVDEAV-------GLLV-------DMESTRFR-----------PTVI 440
                        M+D+ V       G+L+       +ME+  FR           P V 
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA-FRVLSGIEKNGSVPDVH 643

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            Y+ +I G CKT    ++  +L  M +KG  PN   Y  LI+G+   G  + A  + N++
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703

Query: 501 VS 502
           ++
Sbjct: 704 LA 705



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 230/497 (46%), Gaps = 18/497 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    ++ + +E+   ++ M     KP+VV+   LI  F +E  +++A ++++ + 
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P+   Y+ L+ G CK  Q++ A+ +L ++      PD +TYN++I         +
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AF++  ++      P V TY+I+I      G+ +KA  LL+EM                
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G C++G V  A +    +      PD+  YN L+  L  +G+ EE  K   +M  RGL 
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN  TYS LI    ++G  E A  +++   + GL P+   Y  L+ +Y K   ++     
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+  G + D   Y  ++     +GN + A  +   +   G  P+V  Y+++ S L  
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           + D+ +A G++ EM  KG++P+ + YN+LI  LC+ G +  A  +   + +    P  ++
Sbjct: 655 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 714

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y  +I G CK   I+ +  +   M   G  P+   Y +L  G    G   +AM L   + 
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774

Query: 502 SMHAISRDTFKRLNRTF 518
                S  +F  L   F
Sbjct: 775 LRGHASISSFNNLVDGF 791



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 174/380 (45%), Gaps = 25/380 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD FA+ A+    C  +   LAN +L ++     SP VV  +I       R + +S    
Sbjct: 122 PDAFAHLAM--SLCAGSLFNLANGLLIKMIRAYPSPPVVLASI------HRALSDSGHPF 173

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
                R    P      +   A    G+ D      DE    + G   Q     R++E  
Sbjct: 174 AGGARR----PRGYLQEVWEGAGRRGGRPD------DE----RSGHGSQHSVLQRAVEGS 219

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
             +     +   L     + +++  +K++ EM  RG   N VTY++LI+ LCR G  E+A
Sbjct: 220 AARG---RHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 276

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
               +  ++ GL PD ++Y  LI+  CK  R + A   LD M      P++V Y  ++  
Sbjct: 277 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 336

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           F + GNAD+A ++ +++   G  PN  +Y+ +   L   G   RA  ++ +M+     PD
Sbjct: 337 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 396

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITYN +I    R     +A  LL +ME+    P V +Y+I+I G C++    ++ ++L 
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KG KPN   Y  LI G
Sbjct: 457 EMTTKGLKPNAFVYAPLISG 476



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 207/492 (42%), Gaps = 72/492 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           ++G+ +++   +E M   G KP+  +   LI  + +E   + A  + + + K    PD++
Sbjct: 444 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 503

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G  K  ++E + K   +++ RG  P+  TY+ +I      G +ESA ++  ++
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L    KP  + Y  L+++       +K       M                  +   G +
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+ +  +E  G  PDV  Y+ L+  L      E+   ++ EM  +G++PN+V Y+ L
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 683

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+ G    A +V  +   KGL P+  +Y  LI   CK G +  A    + M++ G 
Sbjct: 684 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743

Query: 331 LPD----------------------------------IVNYNTILAAFCKNGNADQALEI 356
            PD                                  I ++N ++  FCK G   + L++
Sbjct: 744 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKL 803

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL------ 410
              +   G  PN  +   + S L  +G       +  E+  K  E     ++SL      
Sbjct: 804 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 863

Query: 411 ------------ISCLCRDGMVDEAVGLLVDMESTRFRPT-VISYNIIILGFCKTRRINE 457
                       I   C++G +D+A+ +L D+   +  P    SY  I+   C+  +++E
Sbjct: 864 QGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 922

Query: 458 SIEVLAAMFEKG 469
           ++ +L  M ++G
Sbjct: 923 ALNLLKEMDKRG 934



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 160/378 (42%), Gaps = 36/378 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++ L++  F++   ++     +SM+  G   D  +   LI           A RV+  +E
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PDV  Y++LISG CK    E A  +LD +  +G  P++V YN +I  LC  G I 
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VF+ +L     P  +TYT LI  +   G    A  L +EM                
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G    G + QA   +  +  RG    + S+N L+      GK +E  KL+  ++ RGL 
Sbjct: 755 TGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLV 813

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN +T   +IS L   GK  +   +    ++K     A  +  L       G++ L  + 
Sbjct: 814 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL--DV 871

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +D MI D                CK GN D+AL + + +     P   SSY  +   L  
Sbjct: 872 VDDMIRD---------------HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCR 916

Query: 382 SGDKIRALGMISEMLSKG 399
            G    AL ++ EM  +G
Sbjct: 917 KGKLSEALNLLKEMDKRG 934



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 139/329 (42%), Gaps = 36/329 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI     +G  + +   +  +  NG  PDV + + LI    +     KA  +++ + K G
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P++  YNALI G CK+  I  A  V + + ++G  P+ VTY  +I   C  G I +AF
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC 205
            +++++L     P    Y++L       G  ++AM L++EM                G C
Sbjct: 733 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFC 792

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G + +  + +  +  RG  P+ ++   ++  L   GK  E   +  E+  +  E    
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 852

Query: 266 TYSIL------------------ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            +S L                  I   C++G  + A+ +      K       SY  ++ 
Sbjct: 853 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 912

Query: 308 AYCKDGRLDLAIEFLDYMISDGCL-PDIV 335
             C+ G+L  A+  L  M   G L P +V
Sbjct: 913 NLCRKGKLSEALNLLKEMDKRGNLQPTLV 941



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 7/198 (3%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           + + L A+CK    D A ++  ++ + GC  N  +YN + + L  SG    A G   +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ PD  TY +LI+ LC+    +EA  LL +M     +P V+ Y  +I GF +    +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNR 516
           E+ +++  M   G +PN+ TY  L+ G+   G    A  L   +V      RD+ +    
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV------RDSHRPDTI 398

Query: 517 TFPLLDVYKEISHLATKD 534
           T+ L+ +     H + KD
Sbjct: 399 TYNLI-IEGHFRHHSKKD 415



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 5/230 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI  S + G    + Y    M+A G  PD  + + L           +A+ ++E + 
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
             G   + ++N L+ GFCK  +++   K+L  +  RG  P+ +T   +I  L   G +  
Sbjct: 775 LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 834

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--GMCKKGMVGQAFQFV 217
              +F +L +   +     ++ L    + +G+    + ++D+M    CK+G + +A    
Sbjct: 835 VHTIFVELQQKTSESAARHFSSLFMDMINQGKI--PLDVVDDMIRDHCKEGNLDKALMLR 892

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVT 266
             + ++       SY  ++  L   GK  E   L+ EM  RG L+P +V 
Sbjct: 893 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 228/505 (45%), Gaps = 71/505 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           AG   E++     M A+GC PD  +   ++       ++ +A  ++ + + +  EP+V  
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YNALI G+C    +ELA  V +R+   G SP+V TY  +I   C    ++ A  +F +++
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                P V+TYT LIQ    +GQ D A +LL  M                  +CK   VG
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   + SL  +G + + I Y  L+  L   G++   ++LM  ++S+G  P+  TYS LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 272 SSLCRDGKTEDAVDVLRAAKEK-----------------------------------GLT 296
             LCR  +  +A+ VL    EK                                   G+ 
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD ++Y   + +YC +GR++ A   + +M+  G  P++V YN ++  +   G   QA   
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 357 FEKLSDVGCPPNVSSYNTMFS----------------ALWSSGDKIRALGMISEMLSKGI 400
           F+ +   GC PN  SY  +                  ++W   +     G++ EM+   +
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQL 574

Query: 401 EPDEI-TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            P EI  YN  ++ LCR   +DEA  LL++M+S    P+   Y  II   C+ + + E++
Sbjct: 575 -PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEAL 633

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGI 484
             + +M + G  P   +Y  +I  +
Sbjct: 634 TFVDSMVKSGYIPQLESYRHIISSL 658



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 182/374 (48%), Gaps = 18/374 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI+ +C A  +  + + L  L   GF+PD   Y   +   C  G++  A ++F  + 
Sbjct: 75  YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
              C  T  TYT L+                   G+C  GMV +A      +++ GC PD
Sbjct: 135 LRGCVRTAFTYTALLH------------------GLCGAGMVREAMSVFAGMQADGCAPD 176

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              Y  ++  L   G+  E E L+++ ++ G EPNVV Y+ LI   C  G  E AVDV  
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G +P+  +Y  LIS +CK  +LD A+     M+  G +P++V Y  ++   C +G
Sbjct: 237 RMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDG 296

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D A  + + + + G  PN  + + +  AL        A  ++  ++ KGI+ +EI Y 
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYT 356

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI  LC+ G    A  L+  + S  F P   +Y+ +I G C+ + ++E++ VL  M EK
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416

Query: 469 GCKPNETTYVLLIE 482
           G +P+  TY ++I+
Sbjct: 417 GVQPSPVTYTIIID 430



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 17/416 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  AY + + G+C+A  +  A ++   +  RG      TY  ++  LC  GM+  A  V
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSV 164

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  +  D C P    Y  ++      G+T +A  LL +                  G C 
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCN 224

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A      ++  GC P+V +Y  L+       K +    L + M+  GL PNVVT
Sbjct: 225 VGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVT 284

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C DG+ + A  +L++ +  GL P+ ++   LI A CK  R+  A   L  +I
Sbjct: 285 YTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI 344

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G   + + Y +++   CK G    A  + + L   G  P+  +Y+++   L    +  
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ +M+ KG++P  +TY  +I  L R+   D +  +L  M +   +P V +Y I +
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +C   R+ ++  ++  M + G  PN  TY  LI G    G  ++A      +V+
Sbjct: 465 RSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVA 520



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 224/535 (41%), Gaps = 75/535 (14%)

Query: 21  SAETRPNTHLLS------FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
           +  TR    LLS      F+     +  LI      G  + ++   E M  NGC P+V  
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
            T+LI  F + RK ++A+ +   +   G  P+V  Y ALI G C   Q++ A ++L  + 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           + G  P+  T +++I +LC    +  A  +   L++   K   I YT LI      G+  
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            A +L+  +                 G+C++  + +A   +  +  +G QP  ++Y +++
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L+     +  +K++ +MI+ G++P+V TY+I + S C +G+ EDA  ++    + G+ 
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVC 489

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP------------------------ 332
           P+  +Y+ LI  Y   G    A     +M+++GC P                        
Sbjct: 490 PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPAN 549

Query: 333 ---------------------------DIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
                                      +I  YN  L + C+    D+A  +  ++     
Sbjct: 550 SVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANL 609

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+   Y ++ +          AL  +  M+  G  P   +Y  +IS LC +G +  A  
Sbjct: 610 TPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQ 669

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +  DM S  +    I++ I+I G  +   + E   +L+ M EK  +P++  Y  L
Sbjct: 670 VFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  + + + SL   G  PD  +Y   +      G      +L   M  RG     
Sbjct: 83  CLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTA 142

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+  LC  G   +A+ V    +  G  PD + Y  ++   C  GR   A   L  
Sbjct: 143 FTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSD 202

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +++G  P++V YN ++  +C  G+ + A+++FE++   GC PNV +Y  + S    S  
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRK 262

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA+ + S M+  G+ P+ +TY +LI   C DG +D A  LL  ME++   P   + ++
Sbjct: 263 LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV 322

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I   CK  R+ E+  +L ++ +KG K NE  Y  LI+G+   G  A A  L   LVS
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 243/475 (51%), Gaps = 22/475 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    ++G  D ++  ++ M   GC P  ++  ++I  F +  +  +A+ +   + 
Sbjct: 228 FGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP 287

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
              +PD+F+YNA++ G C+A + E A +++  +  +  SPD VT+N +I  LC +G+++ 
Sbjct: 288 --CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDC 345

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------GMC 205
           A +V DQ+ +   KP   TY+ LI A   +G  + A++LL  M              G+C
Sbjct: 346 ALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKGLC 405

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G      Q +  +    C PD + + +++  L   G  + G +++ E+ + G  P+VV
Sbjct: 406 RDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVV 465

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            Y+ L++     G+ +D++ + ++   K   P+  +Y+ ++   CK    + A + +D M
Sbjct: 466 MYTSLLNGFAEYGRVDDSLKLFKSMTCK---PNTVTYNYVLMGLCKVELWEDAGKLIDEM 522

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +   C P+ + ++ ++++ C+ G  + A+++FEK+   GC PNV  Y+T+ + L   G  
Sbjct: 523 VGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCV 582

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             AL +++ M  K    D I Y+S +  LCR  + ++A  L+V+M      P  ++++II
Sbjct: 583 DNALKLLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSII 639

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           I   C+   +  + EV   M +  C PN   Y  LI G    G   +A++L  ++
Sbjct: 640 ITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 229/493 (46%), Gaps = 63/493 (12%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK---------------------- 81
           +    R G  D +L  + SM      P VV CT LIKK                      
Sbjct: 68  LHHFIRLGDLDAALQLVGSMSE---PPAVVPCTLLIKKLCAAGRLADAEGVLRASEAADA 124

Query: 82  ---------FFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
                    + +  +   A R++  L   G  DV  YN LI+G+C+  ++E A  ++  +
Sbjct: 125 VDHNTLVAGYCRAGRLADAERMLRSLAASGAADVVTYNTLIAGYCRGGRLEDARLLVASM 184

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
                +P+   YN ++  LCS      A ++ +++ R++  P  +T+ +LI +    G  
Sbjct: 185 PP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLV 241

Query: 193 DKAMKLLDEMGMC-----------------KKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           D+AM +LD M  C                 + G V +A      +    C+PD+ SYN +
Sbjct: 242 DRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAV 298

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L+ L    +WE+  +L+TEM+ +   P+ VT++ +IS LC  G  + A++V+    + G 
Sbjct: 299 LKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGR 358

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD ++Y  LI+A+ + G ++ A+E L  M    C P+ V Y ++L   C++G  +   +
Sbjct: 359 KPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTVCYKSVLKGLCRDGQWEDVGQ 415

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  ++    C P+   +  +   L   G     L ++ E+ + G  PD + Y SL++   
Sbjct: 416 LIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFA 475

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G VD+++ L    +S   +P  ++YN +++G CK     ++ +++  M  + C PNE 
Sbjct: 476 EYGRVDDSLKLF---KSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEM 532

Query: 476 TYVLLIEGIGYGG 488
           T+ +LI  +   G
Sbjct: 533 TFSILISSLCQKG 545



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 228/517 (44%), Gaps = 72/517 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G+ +++   + SM      P+      L+K     ++   A  ++E + 
Sbjct: 161 YNTLIAGYCRGGRLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMT 217

Query: 100 KY-GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +    PD   +  LI  FC++  ++ A  +LDR+   G +P  + YN +I      G ++
Sbjct: 218 RNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVK 277

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A  +F  +    CKP + +Y  +++      + + A +L+ EM                
Sbjct: 278 EALHLFSCM---PCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVI 334

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +C KG+V  A + V  +   G +PD  +Y+ L+      G  E+  +L+  M      
Sbjct: 335 SFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM---PCS 391

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN V Y  ++  LCRDG+ ED   ++         PD   +  +I   C+ G +D  +E 
Sbjct: 392 PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEV 451

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA--- 378
           L  + + GC PD+V Y ++L  F + G  D +L++F+ ++   C PN  +YN +      
Sbjct: 452 LQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCK 508

Query: 379 --LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             LW    K     +I EM+ +   P+E+T++ LIS LC+ G+V+ A+ +   M+     
Sbjct: 509 VELWEDAGK-----LIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCT 563

Query: 437 PTVISYNII--------------------------------ILGFCKTRRINESIEVLAA 464
           P VI Y+ +                                + G C+     ++ E++  
Sbjct: 564 PNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKGLCRAELWEDAGELIVE 623

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           MF K C P+E T+ ++I  +   G+   A E+++ ++
Sbjct: 624 MFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLML 660



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 26/297 (8%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  F  +I    + G  D  L  ++ +   GC PDVVM T L+  F +  + + ++++ +
Sbjct: 429 EMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFK 488

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
            +    +P+   YN ++ G CK    E A K++D +  +   P+ +T++I+I SLC +G+
Sbjct: 489 SMT--CKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGL 546

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +E A  VF+++    C P VI Y+ L      +G  D A+KLL+ M              
Sbjct: 547 VECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM-------------- 592

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                   C+ D I Y+  L+ L     WE+  +L+ EM  +   P+ VT+SI+I++LC+
Sbjct: 593 -------SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQ 645

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            G  E A +V     +   TP+   Y  LI+ + + G L+ A++ L  M    C PD
Sbjct: 646 QGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM---PCEPD 699



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 134/270 (49%), Gaps = 18/270 (6%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N  L   + +G  +   +L+  M      P VV  ++LI  LC  G+  DA  VLRA++ 
Sbjct: 65  NDRLHHFIRLGDLDAALQLVGSMSE---PPAVVPCTLLIKKLCAAGRLADAEGVLRASEA 121

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
                DA  ++ L++ YC+ GRL  A   L  + + G   D+V YNT++A +C+ G  + 
Sbjct: 122 A----DAVDHNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLED 176

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +   +      PN  +YNT+   L S+     A  ++ EM      PD++T+  LI 
Sbjct: 177 ARLLVASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIH 233

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C+ G+VD A+G+L  M      P  I YN II  F +  R+ E++ + + M    CKP
Sbjct: 234 SFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM---PCKP 290

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  +Y  +++G+     RAE  E A  L++
Sbjct: 291 DIFSYNAVLKGL----CRAERWEDAGELIT 316


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 240/514 (46%), Gaps = 42/514 (8%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  D     +  +I   F++G+  E+      MV  G   D+V CT ++   F+  K+ +
Sbjct: 39  MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 98

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  V E + K    P+   Y+AL+ G+CK  ++ELA  VL ++      P+V+T++ +I 
Sbjct: 99  AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 158

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
               +GM+  A  V  ++++ N  P  I Y ILI      G+ D A     EM       
Sbjct: 159 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 218

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      + + G + +A   +  + S+G  PD+++Y  L+      G       ++
Sbjct: 219 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 278

Query: 253 TEMISRGLEPNVVTYSILISSLCR--------------------DGKTEDAVDVLRAAKE 292
            EM  + +  +VV Y+ LI  L R                    D KTEDA+D+L   K 
Sbjct: 279 QEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKS 338

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+ P+A +Y+ LI   CK G ++ A   LD M+    +P  + +  ++ A+ ++  AD+
Sbjct: 339 YGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADK 398

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
            L+I EKL   G   +++ YNT+ +     G   +A  ++ EM+ +GI  D +TYN+LI 
Sbjct: 399 ILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIR 458

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT----RRINESIEVLAAMFEK 468
             C    V++A+     M      P + +YN ++ G          + E+ ++++ M E+
Sbjct: 459 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 518

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  PN  TY +L+ G G  G R + + L   +++
Sbjct: 519 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMIT 552



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 231/513 (45%), Gaps = 73/513 (14%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERK-SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQ 121
           M+ NG  PDVV C+ ++  F +  K +  AV   E+ E   +P+  +Y  +I+   K+ +
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A  +  ++  RG S D+VT   ++  L   G  + A +VF+ +L+ N  P  +TY+ 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           L+      G+ + A  +L +M                 G  KKGM+ +A   +R +  R 
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 225 CQPDVISY-----------------------------------NMLLRTLLNMGKWEEGE 249
             P+ I Y                                   ++LL  L  +G+ +E  
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            L+ +M S+G++P++V Y+ LI    ++G    A+ +++  KEK +  D  +Y+ LI   
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 310 CKDGRLDL--------------------AIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + G+ D                     A++ L+ M S G +P+ V YN ++   CK G 
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            ++A    +++  +   P   ++  +  A   S    + L +  ++++ G+E     YN+
Sbjct: 361 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 420

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI+  CR GM  +A  +L +M        +++YN +I G+C    + ++++  + MF  G
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 480

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             PN TTY  L+ G+   G   E ME    LVS
Sbjct: 481 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVS 513



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 188/406 (46%), Gaps = 38/406 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVF 107
           R G+ DE+   I  M + G  PD+V    LI  +F+E     A+  V E+ EK    DV 
Sbjct: 232 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 291

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYNALI G  +  + +    V  R+   G +PD  T              E A  + +++
Sbjct: 292 AYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCKT--------------EDALDILNEM 336

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  +TY ILI      G  +KA   LDEM            +FV         P
Sbjct: 337 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM---------LVMEFV---------P 378

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             I++  L++      K ++  ++  ++++ GLE ++  Y+ LI+  CR G T  A  VL
Sbjct: 379 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVL 438

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               ++G++ D  +Y+ LI  YC    ++ A++    M  DG  P+I  YNT+L      
Sbjct: 439 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNA 498

Query: 348 G----NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           G      ++  ++  ++++ G  PN ++Y+ + S     G++ + + +  EM++KG  P 
Sbjct: 499 GLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPT 558

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
             TYN LIS   + G + EA  LL D+ +    P   +Y+I+  G+
Sbjct: 559 LKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 604


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 217/458 (47%), Gaps = 17/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G  +++  F   M   G +  V     +++ + + +    A  +     + G
Sbjct: 186 LIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 245

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             +VF +N L+S  CK  ++  A  + D + ++G SP+VV+YN +I   C +  I +A K
Sbjct: 246 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 305

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V+ ++L +   P  +T+TIL+     +G  + A  +   M                 G+C
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G   +         S+G  P  + YN ++   +  G       +  EM   G+ P+ V
Sbjct: 366 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 425

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI   C+    + A+ +L   K KGL  D  +Y  LI  +CK   +  A E L+ +
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P+   YN+++  F    N ++A+++++K+ + G P ++ +Y ++   L  SG  
Sbjct: 486 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 545

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  + +EMLSKGI PD+  +  LI+ LC  G  + A  +L DM      P+V+ YN +
Sbjct: 546 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 605

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I G  K   + E+  +   M ++G  P+  TY +L+ G
Sbjct: 606 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 198/448 (44%), Gaps = 20/448 (4%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALIS 114
           +L  +  M A G  P     T +I    +E    +A+R+ + +   G+  ++    +L+ 
Sbjct: 94  ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 153

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+C    +  A  +++ +   G  P+ VTY+++I   C  G IE AF+ + ++     + 
Sbjct: 154 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 213

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           +V +   +++  +       A  + ++                 +LES     +V ++N 
Sbjct: 214 SVYSLNSILEGYLKCQSWQNAFTMFND-----------------ALESG--LANVFTFNT 254

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L   GK  E   L  E+I++G+ PNVV+Y+ +I   CR      A  V +   + G
Sbjct: 255 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 314

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            TP+A ++  L+  Y K G ++ A      M     LP       I+   CK G + +  
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 374

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++F K    G  P    YNT+       G+   A  +  EM   GI P  +TY SLI   
Sbjct: 375 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+   +D A+ LL DM+    +  + +Y  +I GFCK R +  + E+L  +   G  PN 
Sbjct: 435 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNR 494

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I G        EA++L   +V+
Sbjct: 495 FIYNSMITGFKNMNNVEEAIDLYKKMVN 522



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 208/474 (43%), Gaps = 20/474 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF-FQERKSNKAVRVM 95
           E  F  +I    + G   E+L   + MV  G   ++ + T L+K +  Q    +  V V 
Sbjct: 110 EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 169

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           EI E    P+   Y+ LI G CK   IE A +    ++++G    V + N ++       
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 229

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             ++AF +F+  L       V T+  L+     EG+ ++A  L DE              
Sbjct: 230 SWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDE-------------- 274

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               + ++G  P+V+SYN ++             K+  EM+  G  PN VT++IL+    
Sbjct: 275 ----VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 330

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  E+A  +    K+  + P   +   +I   CK GR     +  +  +S G +P  +
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+  F K GN + A  ++ ++ +VG  P+  +Y ++        +   AL ++++M
Sbjct: 391 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             KG++ D   Y +LI   C+   +  A  LL ++      P    YN +I GF     +
Sbjct: 451 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            E+I++   M  +G   +  TY  LI+G+   G    A ++   ++S   +  D
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 564



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 36/342 (10%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           M +K M  +A +    +   G   D  + +++LR  L  G   E E+   +  +RG+E +
Sbjct: 15  MVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELD 74

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA--------------- 308
              YSI +  LC    +  A+ +LR  +  G  P   ++  +I+A               
Sbjct: 75  QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKD 134

Query: 309 --------------------YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                               YC  G L  A+  ++ +   G +P+ V Y+ ++   CKNG
Sbjct: 135 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 194

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N ++A E + ++   G   +V S N++            A  M ++ L  G+  +  T+N
Sbjct: 195 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFN 253

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +L+S LC++G ++EA  L  ++ +    P V+SYN IILG C+   IN + +V   M + 
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           G  PN  T+ +L++G    G    A  + + +   + +  DT
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 19/304 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           +T    +IK   +AG+  E        V+ G  P  +    +I  F +E   N A  V  
Sbjct: 354 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 413

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ E    P    Y +LI GFCK N I+LA K+L+ ++ +G   D+  Y  +I   C R 
Sbjct: 414 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++SA ++ ++L      P    Y  +I         ++A+ L  +M             
Sbjct: 474 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 533

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+ K G +  A      + S+G  PD  ++ +L+  L N G++E   K++ +M  +
Sbjct: 534 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 593

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK-DGRLDL 317
            + P+V+ Y+ LI+   ++G  ++A  +     ++GL PD  +YD L++   K DG    
Sbjct: 594 NMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSR 653

Query: 318 AIEF 321
            + F
Sbjct: 654 DLTF 657



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 127/276 (46%), Gaps = 1/276 (0%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P +   N+LL  ++      E  +L  +M+  G+  +  T  +++ +  ++G   +A   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
              AK +G+  D  +Y   +   C       A+  L  M + G +P    + +++ A  K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            GN  +AL + + + + G   N++   ++       G+   AL +++E+   G+ P+++T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ LI   C++G +++A     +M++   R +V S N I+ G+ K +    +  +     
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           E G   N  T+  L+  +   G   EA  L + +++
Sbjct: 243 ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIA 277


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 232/455 (50%), Gaps = 15/455 (3%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           +L++    +  F+++L     ++ +G +PD V   K ++     +  +K   +M+ + K 
Sbjct: 127 RLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKD 186

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  P VFAYN ++ G CK  +I+ A K+ D +  R   P+ VTYN +I   C  G IE A
Sbjct: 187 GMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEA 246

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF-QFVRS 219
               +++   N +  ++TY  L+      G+ D A ++L EM     G +   F  FV  
Sbjct: 247 LGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEME--GSGFLPGGFLSFVFD 304

Query: 220 LESRGCQPDVI-----------SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
             S G   D +           +Y +LL  L  +G+ E+ E+++ +++  G+ P+ ++Y+
Sbjct: 305 DHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           IL+++ C++G  + A+      +E+GL P+  +++ +IS +C+ G +D A  ++  M+  
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P +  YN+++  + + G+  +  E  +++   G  PNV SY ++ + L      I A
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             ++++M+ +G+ P+   YN LI   C    + +A     +M  +    T+++YN +I G
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +  R+ ++ ++   M  KGC P+  TY  LI G
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 51/447 (11%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D   Y  L++G C+  +IE A +VL +L   G +P  ++YNI++ + C  G ++ A    
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           +Q+     +P  IT+  +I      G+ D A   +  M                 G  +K
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G   + F+F+  ++  G +P+VISY  L+  L    K  + E ++ +MI RG+ PN   Y
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI + C   K +DA        + G+     +Y+ LI+   ++GR+  A +    M  
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS---------------- 371
            GC PD++ YN++++ + K+ N  + LE+++K+  +G  P V +                
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTM 623

Query: 372 ------------------YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
                             YN M  +    G+ ++A+ +  +M+ +G++ D++TYNSLI  
Sbjct: 624 DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             RD  V E   L+ DM++    P V +YNI+I G C  +  N +      M E+G   N
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLN 743

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANAL 500
            +    LI G+   G   EA  +++ L
Sbjct: 744 VSMCYQLISGLREEGMLREAQIVSSEL 770



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 204/469 (43%), Gaps = 60/469 (12%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P   + N L+     +   E    V   +   G  PD V Y   + +      ++  F++
Sbjct: 120 PSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              +++D   P+V  Y +++       +   A KL DEM                 G CK
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV- 265
            G + +A  F   ++ +  + ++++YN LL  L   G+ ++  +++ EM   G  P    
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFL 299

Query: 266 ---------------------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
                                      TY IL++ LCR G+ E A +VL    E G+TP 
Sbjct: 300 SFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS 359

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             SY+ L++AYC++G +  AI   + M   G  P+ + +NT+++ FC+ G  D A     
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR 419

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ + G  P V +YN++ +     G  +R    + EM   GI+P+ I+Y SLI+CLC+D 
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + +A  +L DM      P    YN++I   C   ++ ++      M + G      TY 
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539

Query: 479 LLIEGIGYGGWRAEAMEL---------------ANALVSMHAISRDTFK 512
            LI G+G  G   +A +L                N+L+S +A S +T K
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQK 588



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 45/410 (10%)

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           +  ++ A  +   +R  GF P   + N ++ +L      E    VF  ++    +P  + 
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 179 YTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLE 221
           Y   +QA ++    DK  +L+  M                 G+CK   +  A +    + 
Sbjct: 160 YGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMI 219

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            R   P+ ++YN L+     +G  EE       M  + +E N+VTY+ L++ LC  G+ +
Sbjct: 220 QRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVD 279

Query: 282 DAVDVLRAAKEKGLTP----------------------------DAYSYDPLISAYCKDG 313
           DA +VL   +  G  P                            D  +Y  L++  C+ G
Sbjct: 280 DAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVG 339

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R++ A E L  ++ +G  P  ++YN ++ A+C+ G+  +A+   E++ + G  PN  ++N
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+ S    +G+   A   +  M+ KG+ P   TYNSLI+   + G        L +M+  
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA 459

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +P VISY  +I   CK R++ ++  VLA M  +G  PN   Y +LIE 
Sbjct: 460 GIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 54/395 (13%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I +    G+ D +  ++  MV  G  P V     LI  + Q+    +    ++ ++
Sbjct: 398 FNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMD 457

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +P+V +Y +LI+  CK  ++  A  VL  +  RG SP+   YN++I + CS   ++
Sbjct: 458 KAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLK 517

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AF+ FD++++     T++TY  LI                   G+ + G V +A     
Sbjct: 518 DAFRFFDEMIQSGIDATLVTYNTLIN------------------GLGRNGRVKKAEDLFL 559

Query: 219 SLESRGCQPDVISYNMLLRTL---LNMGKW---------------------------EEG 248
            +  +GC PDVI+YN L+      +N  K                            +EG
Sbjct: 560 QMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG 619

Query: 249 ----EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
               +K+  EM+   L P+   Y+ +I S   DG    A+ + +   ++G+  D  +Y+ 
Sbjct: 620 VVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNS 679

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI AY +D R+      +D M + G +P +  YN ++   C   + + A   + ++ + G
Sbjct: 680 LILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERG 739

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
              NVS    + S L   G  +R   ++S  LS G
Sbjct: 740 LLLNVSMCYQLISGLREEG-MLREAQIVSSELSIG 773



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 37/328 (11%)

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           ++  +  G+T  A + L  + + K      AF  +  L +   +P   S N+L   L ++
Sbjct: 48  LETLISRGRTITARRFLRSLLLTK-----TAFSSLSELHAHVSKP-FFSDNLLW--LCSV 99

Query: 243 GKW-EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            K  +E   L + M   G  P+  + + L+ +L      E  + V     + G  PDA +
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y   + A      LD   E +  M+ DG  P +  YN +L   CK      A ++F+++ 
Sbjct: 160 YGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMI 219

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                PN  +YNT+       G    ALG    M  + +E + +TYNSL++ LC  G VD
Sbjct: 220 QRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVD 279

Query: 422 EAVGLLVDMESTRFRPTVI----------------------------SYNIIILGFCKTR 453
           +A  +L++ME + F P                               +Y I++ G C+  
Sbjct: 280 DAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVG 339

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLI 481
           RI ++ EVLA + E G  P++ +Y +L+
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILV 367



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 20/251 (7%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D     +  LI    R G+  ++      M   GC PDV+    LI  + +   + K + 
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           + + ++  G +P V  ++ LI   C+   +   +K+   +      PD   YN MI S  
Sbjct: 592 LYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
             G +  A  +  Q++        +TY  LI A + + +  +   L+D+M          
Sbjct: 651 EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM---------- 700

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
                   +++G  P V +YN+L++ L ++  +        EM+ RGL  NV     LIS
Sbjct: 701 --------KAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLIS 752

Query: 273 SLCRDGKTEDA 283
            L  +G   +A
Sbjct: 753 GLREEGMLREA 763


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 226/464 (48%), Gaps = 20/464 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I   FR G+  ++      M+  G  PDVV  T +I    + R  +KA  V+  +   G
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+   YN +I G+  + Q +    +   + S+G  P++VT N  + SLC  G  + A 
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           + FD +     KP ++TY++L+     EG     + L +                  S+E
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN------------------SME 394

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G   D   +N+++      G  +E   + T+M  +G+ P+  TY I+I++  R G+  
Sbjct: 395 GNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLA 454

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC-LPDIVNYNTI 340
           DA+D        GL P+   Y  LI  +C  G L  A E +  M+S G   P+IV +N+I
Sbjct: 455 DAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSI 514

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + + CK G   +A +IF+ +  +G  P+V ++N++       G   +A G++  M+S GI
Sbjct: 515 INSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           EPD ++YN+LI   CR+G +D+ + L  +M S   +PT I+Y II+ G     R   + +
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKK 634

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +   M E G   + +T  +++ G+       EA+ +   L +M+
Sbjct: 635 MCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMN 678



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 229/441 (51%), Gaps = 23/441 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM--EILEKYGEPDVFAYNALISGFCKANQIEL 124
           G K DV++ + L+K  +  ++S+  V ++   + E   EPD  +YN ++   C+ ++ + 
Sbjct: 149 GLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQR 208

Query: 125 ANKVLDRL--RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           A  +L  +  +S G SP+VVTYN +I  L   G +  A  +F ++++    P V+TYT +
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSI 268

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I A                  +CK   + +A   +R + S G QP+ ++YN ++      
Sbjct: 269 IDA------------------LCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSIS 310

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+W+E   +  EM S+GL PN+VT +  +SSLC+ GK+++A +   +   KG  P+  +Y
Sbjct: 311 GQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTY 370

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             L+  Y  +G     +   + M  +G + D   +N ++ A+ K G  D+ + IF ++ +
Sbjct: 371 SVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQE 430

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  P+  +Y  + +A    G    A+   ++M++ G++P+ I Y+SLI   C  G + +
Sbjct: 431 QGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVK 490

Query: 423 AVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           A  L+ +M S    RP ++ +N II   CK  R+ E+ ++   +   G +P+  T+  LI
Sbjct: 491 AKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLI 550

Query: 482 EGIGYGGWRAEAMELANALVS 502
           +G G  G   +A  + +A++S
Sbjct: 551 DGYGLVGKIEKAFGVLDAMIS 571



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 196/417 (47%), Gaps = 19/417 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+  F +SM A G KP++V  + L+  +  E      + +   +E  G   D  
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQR 403

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N +I  + K   ++    +  +++ +G  PD  TY I+I +    G +  A   F+Q+
Sbjct: 404 VFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM 463

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +    KP  I Y  LIQ   + G   KA +L+ EM                   +CK+G 
Sbjct: 464 IAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGR 523

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A      +   G +PDVI++N L+     +GK E+   ++  MIS G+EP+VV+Y+ 
Sbjct: 524 VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   CR+G+ +D + +      KG+ P   +Y  ++     DGR   A +    MI  G
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              DI     IL   C+N   D+A+ +F+KL  +    N++  NTM  A++    +  A 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAK 703

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            +   + + G+ P+  TY  +I  L ++G V+EA  +   ME +   P+    N II
Sbjct: 704 ELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYII 760



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 191/402 (47%), Gaps = 21/402 (5%)

Query: 122 IELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + L N++  +  R R   P V TYNI++   C        F +F + L+   K  VI  +
Sbjct: 99  VALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVAS 158

Query: 181 ILIQATMLEGQTDKAMKLL----DEMG--------------MCKKGMVGQAFQFVRSL-- 220
           IL++      ++D  + LL     E+G              +C+     +A   + ++  
Sbjct: 159 ILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVK 218

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           +S GC P+V++YN ++  L   G+  +   L  EM+ +G+ P+VVTY+ +I +LC+    
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAM 278

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  VLR     G  P+  +Y+ +I  Y   G+          M S G +P+IV  N+ 
Sbjct: 279 DKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSY 338

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +++ CK+G + +A E F+ ++  G  PN+ +Y+ +     + G  +  L + + M   GI
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
             D+  +N +I    + GM+DE + +   M+     P   +Y I+I  F +  R+ ++++
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
               M   G KP    Y  LI+G    G   +A EL + ++S
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 32/427 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----- 103
           + G  DE++     M   G  PD      +I  F      ++  R+ + ++K+ +     
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF------SRMGRLADAMDKFNQMIAMG 467

Query: 104 --PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESA 160
             P+   Y++LI GFC    +  A +++  + SRG   P++V +N +I SLC  G +  A
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             +FD ++    +P VIT+  LI    L G+ +KA  +LD M                  
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM------------------ 569

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S G +PDV+SYN L+      G+ ++G  L  EM+S+G++P  +TY I++  L  DG+T
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
             A  +     E G T D  +   ++   C++   D AI     + +     +I   NT+
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + A  K    ++A E+F+ +S  G  PN S+Y  M   L   G    A  M S M   G 
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P     N +I  L   G + +A   +  ++  R      + ++++  F +  +  E ++
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVK 809

Query: 461 VLAAMFE 467
           +L A ++
Sbjct: 810 LLPAKYQ 816



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 18/268 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVMEIL 98
           F  LI      GK +++   +++M++ G +PDVV    LI  + +  R  +  +   E+L
Sbjct: 546 FNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEML 605

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K  +P    Y  ++ G     +   A K+   +   G + D+ T  I++G LC     +
Sbjct: 606 SKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDD 665

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F +L   N K  +     +I A     + ++A +L D +                
Sbjct: 666 EAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMI 725

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             + K+G V +A      +E  GC P     N ++R LL  G+  +    M ++  + + 
Sbjct: 726 KNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRIS 785

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRA 289
               T S+L++   R+GK  + V +L A
Sbjct: 786 LEASTVSLLMALFSREGKYWEDVKLLPA 813


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 228/468 (48%), Gaps = 30/468 (6%)

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+R + ++ + G  PD + +N+LI G+C+ NQ+++A  + D++  RGF+ DVV+Y  +I 
Sbjct: 30  ALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIE 89

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL---DEMGM-- 204
             C  G I+ A ++F ++     +P +  Y  L++     G+ ++ + +L    E+G   
Sbjct: 90  GFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRP 145

Query: 205 ------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                       C +    +A + ++ +  +G  P V++   ++      G+  +  +++
Sbjct: 146 STRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 205

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M  RG +PNV TY+ L+   C +GK   A+ +L   +  G+ PDA +Y+ LI   C D
Sbjct: 206 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCID 265

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G ++ A   L  M  DG + D   YN ++ A CK+G  DQA  +F+ L   G  PN  ++
Sbjct: 266 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 325

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N++ + L  SG    A   + +M+S G  PD  TY+S I  LC+     E +  + +M  
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
              +P+ ++Y I+I    K R           M   GC P+  TY   +      G   E
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445

Query: 493 A----MELANALVSMHAISRDTF----KRLNRTFPLLDVYKEISHLAT 532
           A    ME++   V++  ++ +T       + +T   + + K+++ +A+
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 493



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 216/484 (44%), Gaps = 89/484 (18%)

Query: 109 YNALIS-----------------------------------GFCKANQIELANKVLDRLR 133
           YNA+I                                    G+C+ NQ+++A  + D++ 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVF---DQ--------LLRDNCK--------- 173
            RGF+ DVV+Y  +I   C  G I+ A ++F   DQ        L++  CK         
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLL 133

Query: 174 -----------PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
                      P+   Y  ++     E +  +A ++L EM                   C
Sbjct: 134 MLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC 193

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+G +  A + +  ++ RGC+P+V +YN L++   N GK  +   L+ +M   G+ P+ V
Sbjct: 194 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV 253

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY++LI   C DG  E A  +LR  +  GL  D Y+Y+ LI+A CKDGR D A    D +
Sbjct: 254 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 313

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            + G  P+ V +N+++   CK+G  D A +  EK+   GC P+  +Y++    L      
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRD---GMVDEAVGLLVDMESTRFRPTVISY 442
              L  I EML K ++P  + Y  +I  L ++   G+V    G   +M S+   P V++Y
Sbjct: 374 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG---EMVSSGCNPDVVTY 430

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              +  +C   R+NE+  VL  M + G   +   Y  L++G    G    A+ +   + S
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490

Query: 503 MHAI 506
           + ++
Sbjct: 491 VASV 494



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 238/539 (44%), Gaps = 71/539 (13%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K  E+   ++ M   G  P VV CT +I  + +E + + A+RV+E+++  G +P+V+ YN
Sbjct: 162 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 221

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           AL+ GFC   ++  A  +L+++R  G +PD VTYN++I   C  G IESAF++   +  D
Sbjct: 222 ALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
                  TY  LI A   +G+TD+A  L D +                 G+CK G V  A
Sbjct: 282 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIA 341

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG-----------------------EK 250
           ++F+  + S GC PD  +Y+  +  L  M   +EG                        K
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 401

Query: 251 LMTE------------MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L+ E            M+S G  P+VVTY+  + + C +G+  +A +VL    + G+T D
Sbjct: 402 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 461

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL----------------- 341
             +Y+ L+  +   G+ D A+  L  M S   +P+   Y  +L                 
Sbjct: 462 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 521

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
           A   K         +F+ +      PN  +Y+++       G    A  ++S M    I 
Sbjct: 522 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +E  Y +L++C C+     +A  L+  M    F P ++SY  ++ G     + +++ E+
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA-ISRDTFKRLNRTFP 519
                 K   P+E  + ++I+G+   G    + E+   L  M+   S  T+  L    P
Sbjct: 642 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELP 700



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 217/506 (42%), Gaps = 39/506 (7%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F      +  LI+     G+ DE++     M     +PD+ M   L+K   +  +  
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGE 129

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           + + ++  +++ G  P   AY A++   C   + + A ++L  +  +G +P VVT   +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            + C  G +  A +V + +    CKP V TY  L+Q    EG+  KAM LL++M      
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G C  G +  AF+ +R +E  G   D  +YN L+  L   G+ ++   L
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              + +RG++PN VT++ LI+ LC+ GK + A   L      G TPD Y+Y   I   CK
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
                  + F+  M+     P  VNY  ++    K  N       + ++   GC P+V +
Sbjct: 370 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 429

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y T   A    G    A  ++ EM   G+  D + YN+L+      G  D AV +L  M 
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK-----------------PNE 474
           S    P   +Y I++    + R + + + +  A   K  +                 PN 
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            TY  ++EG    G   EA  L + +
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLM 575



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN++I  LCR   +  A+  L  M  + +RP   ++N +I+G+C+T +++ + ++   M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +G   +  +Y  LIEG    G   EA+EL
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVEL 103


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 236/463 (50%), Gaps = 20/463 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+R  + G+ +++L F + M + G  P V     +I+ + + +K  +A+++ +   
Sbjct: 376 FSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 435

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           + G  +VF  N ++S  CK  +I+ A ++L ++ SRG  P+VV+YN ++ + C +  ++ 
Sbjct: 436 ETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDL 495

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A  VF  +L    KP   TY+ILI            ++++++M                 
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIIN 555

Query: 203 GMCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           G+CK G   +A + + ++  E R C    +SYN ++   +  G+ +       EM + G+
Sbjct: 556 GLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGI 614

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNV+TY+ L+  LC++ + + A+++    K KG+  D  +Y  LI  +CK   ++ A  
Sbjct: 615 SPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASA 674

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               ++ +G  P    YN++++ F   GN   AL++++K+   G   ++ +Y T+   L 
Sbjct: 675 LFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 734

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G+ I A  + +EM + G+ PDEI Y  +++ L + G   + V +  +M+     P V+
Sbjct: 735 KEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 794

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            YN +I G  +   ++E+  +   M +KG  P+  T+ +L+ G
Sbjct: 795 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 196/397 (49%), Gaps = 22/397 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A+N L++ + K  Q + A  +++++   G  P V   N  + +L  R  I  A +++ ++
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +         T  +L++A++ E +  +A+++                 F R++E RG +P
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEV-----------------FSRAIE-RGAEP 265

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSILISSLCRDGKTEDAVDV 286
           D + Y++ ++             L+ EM  + L  P+  TY+ +I +  + G  EDA+  
Sbjct: 266 DSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRW 325

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G++ +  +   LI+ +CK+  L  A++    M ++G  P+ V ++ ++  F K
Sbjct: 326 KDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSK 385

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGIEPDEI 405
           NG  ++ALE ++K+  +G  P+V   +T+    W  G K   AL +  E    G+  +  
Sbjct: 386 NGEMEKALEFYKKMESLGLTPSVFHVHTIIQG-WLKGQKHEEALKLFDESFETGL-ANVF 443

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
             N+++S LC+ G +D+A  LL  MES    P V+SYN ++L  C+ + ++ +  V + M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            EKG KPN  TY +LI+G          +E+ N + S
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTS 540



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 209/495 (42%), Gaps = 90/495 (18%)

Query: 78  LIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + ++R+++ AV ++ ++LE    P V   N  +S   + N I  A ++  R+ + G
Sbjct: 168 LLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIG 227

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
              D  T  +++ +         A +VF + +    +P  + Y++ +QA           
Sbjct: 228 VDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQAC---------- 277

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   CK   +  A   +R + E + C P   +Y  ++   +  G  E+  +   EM
Sbjct: 278 --------CKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEM 329

Query: 256 ISRGL-----------------------------------EPNVVTYSILISSLCRDGKT 280
           +S G+                                    PN VT+S+LI    ++G+ 
Sbjct: 330 VSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEM 389

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAY------------------------------- 309
           E A++  +  +  GLTP  +    +I  +                               
Sbjct: 390 EKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTIL 449

Query: 310 ---CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK G++D A E L  M S G  P++V+YN ++ A C+  N D A  +F  + + G  
Sbjct: 450 SWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLK 509

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PN  +Y+ +    + + D+   L ++++M S  IE + + Y ++I+ LC+ G   +A  L
Sbjct: 510 PNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 569

Query: 427 LVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L +M E  RF  + +SYN II GF K   ++ ++     M   G  PN  TY  L++G+ 
Sbjct: 570 LANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLC 629

Query: 486 YGGWRAEAMELANAL 500
                 +A+E+ + +
Sbjct: 630 KNNRMDQALEMRDEM 644



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 156/362 (43%), Gaps = 19/362 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R    D +     +M+  G KP+    + LI   F+       + V+  +     E +  
Sbjct: 489 RKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGV 548

Query: 108 AYNALISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            Y  +I+G CK  Q   A ++L + +  + F    ++YN +I      G ++ A   +++
Sbjct: 549 VYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +  +   P VITYT L+       + D+A+++ DEM                 G CKK  
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSN 668

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A      L   G  P    YN L+    N+G       L  +M+  GL  ++ TY+ 
Sbjct: 669 MESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 728

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  L ++G    A D+    +  GL PD   Y  +++   K G+    ++  + M  + 
Sbjct: 729 LIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNN 788

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+++ YN ++A   + GN D+A  + +++ D G  P+ ++++ + S        IRA 
Sbjct: 789 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAA 848

Query: 390 GM 391
            +
Sbjct: 849 SL 850



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 19/277 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V    +  +I    + G+ D ++   E M ANG  P+V+  T L+    +  + ++A+
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQAL 638

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            + + ++  G + D+ AY ALI GFCK + +E A+ +   L   G +P    YN +I   
Sbjct: 639 EMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF 698

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            + G + +A  ++ ++L+D  +  + TYT LI   + EG    A  L  EM         
Sbjct: 699 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM--------- 749

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                    ++ G  PD I Y +++  L   G++ +  K+  EM    + PNV+ Y+ +I
Sbjct: 750 ---------QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 800

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           +   R+G  ++A  +     +KG+ PD  ++D L+S 
Sbjct: 801 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G E N   ++ L+++  +D +T+ AVD++    E G+ P     +  +SA  +   +  A
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E    M++ G   D      ++ A  +     +ALE+F +  + G  P+   Y+    A
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276

Query: 379 LWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
              + +   A  ++ EM  K +  P + TY S+I    + G +++A+    +M S     
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V++   +I G CK   +  ++++   M  +G  PN  T+ +LIE     G   +A+E  
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFY 396

Query: 498 NALVSM 503
             + S+
Sbjct: 397 KKMESL 402



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 1/283 (0%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
             V S +  G + +  ++N LL       + +    ++ +M+  G+ P V   +  +S+L
Sbjct: 148 NLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSAL 207

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            +     +A ++       G+  D  +   L+ A  ++ +   A+E     I  G  PD 
Sbjct: 208 VQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDS 267

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           + Y+  + A CK  N   A  +  ++ +   C P+  +Y ++  A    G+   A+    
Sbjct: 268 LLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKD 327

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+S GI  + +   SLI+  C++  +  A+ L   ME+    P  ++++++I  F K  
Sbjct: 328 EMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNG 387

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + +++E    M   G  P+      +I+G   G    EA++L
Sbjct: 388 EMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKL 430


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 217/458 (47%), Gaps = 17/458 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G  +++  F   M   G +  V     +++ + + +    A  +     + G
Sbjct: 304 LIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG 363

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
             +VF +N L+S  CK  ++  A  + D + ++G SP+VV+YN +I   C +  I +A K
Sbjct: 364 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 423

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           V+ ++L +   P  +T+TIL+     +G  + A  +   M                 G+C
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G   +         S+G  P  + YN ++   +  G       +  EM   G+ P+ V
Sbjct: 484 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 543

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ LI   C+    + A+ +L   K KGL  D  +Y  LI  +CK   +  A E L+ +
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  P+   YN+++  F    N ++A+++++K+ + G P ++ +Y ++   L  SG  
Sbjct: 604 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 663

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  + +EMLSKGI PD+  +  LI+ LC  G  + A  +L DM      P+V+ YN +
Sbjct: 664 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 723

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           I G  K   + E+  +   M ++G  P+  TY +L+ G
Sbjct: 724 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 198/448 (44%), Gaps = 20/448 (4%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALIS 114
           +L  +  M A G  P     T +I    +E    +A+R+ + +   G+  ++    +L+ 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G+C    +  A  +++ +   G  P+ VTY+++I   C  G IE AF+ + ++     + 
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
           +V +   +++  +       A  + ++                 +LES     +V ++N 
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFND-----------------ALESG--LANVFTFNT 372

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L   GK  E   L  E+I++G+ PNVV+Y+ +I   CR      A  V +   + G
Sbjct: 373 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 432

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            TP+A ++  L+  Y K G ++ A      M     LP       I+   CK G + +  
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 492

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           ++F K    G  P    YNT+       G+   A  +  EM   GI P  +TY SLI   
Sbjct: 493 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+   +D A+ LL DM+    +  + +Y  +I GFCK R +  + E+L  +   G  PN 
Sbjct: 553 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNR 612

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
             Y  +I G        EA++L   +V+
Sbjct: 613 FIYNSMITGFKNMNNVEEAIDLYKKMVN 640



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 208/474 (43%), Gaps = 20/474 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF-FQERKSNKAVRVM 95
           E  F  +I    + G   E+L   + MV  G   ++ + T L+K +  Q    +  V V 
Sbjct: 228 EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 287

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           EI E    P+   Y+ LI G CK   IE A +    ++++G    V + N ++       
Sbjct: 288 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 347

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
             ++AF +F+  L       V T+  L+     EG+ ++A  L DE              
Sbjct: 348 SWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDE-------------- 392

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               + ++G  P+V+SYN ++             K+  EM+  G  PN VT++IL+    
Sbjct: 393 ----VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 448

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  E+A  +    K+  + P   +   +I   CK GR     +  +  +S G +P  +
Sbjct: 449 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 508

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNTI+  F K GN + A  ++ ++ +VG  P+  +Y ++        +   AL ++++M
Sbjct: 509 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 568

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             KG++ D   Y +LI   C+   +  A  LL ++      P    YN +I GF     +
Sbjct: 569 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 628

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            E+I++   M  +G   +  TY  LI+G+   G    A ++   ++S   +  D
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 682



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 21/440 (4%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
           T   +  F +  S K+VR   ++++  E     YN  +    + N +E     L + ++R
Sbjct: 131 THRAQYLFDQFASGKSVRFSCLMDRLVECTKL-YNFPLD-IQEGNILEAEQHFL-QAKAR 187

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   D   Y+I +  LC +     A  +  ++      P   T+T +I A + EG   +A
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           ++L D+M                 G C +G +  A   V  +   G  P+ ++Y++L+  
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 307

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G  E+  +  +EM ++G+  +V + + ++    +    ++A  +   A E GL  +
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-N 366

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
            ++++ L+S  CK+G+++ A    D +I+ G  P++V+YN I+   C+  N + A ++++
Sbjct: 367 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++ D G  PN  ++  +    +  GD   A  +   M    I P + T   +I  LC+ G
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
              E   L     S  F PT + YN II GF K   IN +  V   M E G  P+  TY 
Sbjct: 487 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 546

Query: 479 LLIEGIGYGGWRAEAMELAN 498
            LI+G   G     A++L N
Sbjct: 547 SLIDGFCKGNNIDLALKLLN 566



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 1/299 (0%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C K   G A   +R + + G  P   ++  ++   +  G   E  +L  +M++ G   N
Sbjct: 203 LCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMN 262

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +   + L+   C  G    A+ ++    E GL P+  +Y  LI   CK+G ++ A EF  
Sbjct: 263 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 322

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M + G    + + N+IL  + K  +   A  +F    + G   NV ++NT+ S L   G
Sbjct: 323 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEG 381

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A  +  E+++KGI P+ ++YN++I   CR   ++ A  +  +M    F P  +++ 
Sbjct: 382 KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 441

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I++ G+ K   I  +  +   M +    P +TT  ++I+G+   G   E  +L N  VS
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS 500



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           ++G + +A Q     ++RG + D  +Y++ +  L           L+ EM + G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++ +I++  ++G   +A+ +       G + +      L+  YC  G L  A+  ++ +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G +P+ V Y+ ++   CKNGN ++A E + ++   G   +V S N++          
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  M ++ L  G+  +  T+N+L+S LC++G ++EA  L  ++ +    P V+SYN I
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           ILG C+   IN + +V   M + G  PN  T+ +L++G    G    A  + + +   + 
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 506 ISRDT 510
           +  DT
Sbjct: 469 LPTDT 473



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 19/304 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           +T    +IK   +AG+  E        V+ G  P  +    +I  F +E   N A  V  
Sbjct: 472 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 531

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+ E    P    Y +LI GFCK N I+LA K+L+ ++ +G   D+  Y  +I   C R 
Sbjct: 532 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 591

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            ++SA ++ ++L      P    Y  +I         ++A+ L  +M             
Sbjct: 592 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 651

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+ K G +  A      + S+G  PD  ++ +L+  L N G++E   K++ +M  +
Sbjct: 652 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 711

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK-DGRLDL 317
            + P+V+ Y+ LI+   ++G  ++A  +     ++GL PD  +YD L++   K DG    
Sbjct: 712 NMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSR 771

Query: 318 AIEF 321
            + F
Sbjct: 772 DLTF 775


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 222/516 (43%), Gaps = 55/516 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVM 95
           E   +  I    RAG  D +L         GC+ P V +   L+    +E      V V 
Sbjct: 33  EDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVY 92

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           + + K G +P+V+ YN LI   C+ ++++ A K+LD +  +G  PD V++  ++  +C  
Sbjct: 93  DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 152

Query: 155 GMIESA------------------------------FKVFDQLLRDNCKPTVITYTILIQ 184
           G +E A                              F V +++++   +P V+TYT ++ 
Sbjct: 153 GRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 212

Query: 185 ATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
           A     +   A  +L  M                 G  + G V  A      +   G  P
Sbjct: 213 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 272

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             ISYN+L+R L  +G  +        M    L PN  TYS L+      G  + A+ + 
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 332

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              K  G  P+   Y  +I   CK    D A   +D M+ D C P+ V +NT++   C  
Sbjct: 333 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 392

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +AL +F  +   GC PN  +YN +   L+  G+   A  M+ EML+ G E   +TY
Sbjct: 393 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N++I+CLC+  M   A+ LL  M     +P   ++N II  +CK  +++ +  +L  M  
Sbjct: 453 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 512

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             C  N   Y +LI  +   G      +L+NA+V +
Sbjct: 513 VNCPRNVVAYTILISELCNQG------KLSNAMVYL 542



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 220/485 (45%), Gaps = 53/485 (10%)

Query: 50  AGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPD 105
           AG  D   Y ++ M   G  C  D ++    I  F +   +++A++        G  +P 
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAA--IGAFARAGSADRALKTFYRASDLGCRDPG 68

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  YN L+    + N +     V D +R  G  P+V TYN++I +LC    +++A K+ D
Sbjct: 69  VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 128

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------GMCKKGMVGQA 213
           ++ R  C P  +++  ++      G+ ++A   L E              +C +  + + 
Sbjct: 129 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEV 188

Query: 214 FQFVRSLESRGCQPDVISY------------------------------NMLLRTLLNMG 243
           F  V  +  RG QP+V++Y                              N+L  T L  G
Sbjct: 189 FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKG 248

Query: 244 KWEEGE-----KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
            +E+G+      +   M+  G  P+ ++Y++LI  LC  G  + A+D   + K   L P+
Sbjct: 249 FFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN 308

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           A +Y  L+  +   G LD A+   + M S GC P++V Y  ++   CK    DQA  + +
Sbjct: 309 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 368

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           K+    CPPN  ++NT+   L   G   RAL +   M   G  P++ TYN L+  L R+G
Sbjct: 369 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 428

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
              +A  ++++M +  F  ++++YN +I   C+      ++ +L  M  +G +P+  T+ 
Sbjct: 429 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 488

Query: 479 LLIEG 483
            +I  
Sbjct: 489 AIIHA 493



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 172/342 (50%), Gaps = 18/342 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            +  MV+ GC P+V+  T L+K FF++ K + A+ +   +   G  P   +YN LI G C
Sbjct: 226 ILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLC 285

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
               ++ A    + ++     P+  TY+ ++    + G ++ A  +++++    CKP V+
Sbjct: 286 CIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVV 345

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSL 220
            YT +I     +   D+A  L+D+M M                 C  G VG+A      +
Sbjct: 346 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 405

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              GC P+  +YN LL  L   G  ++   ++ EM++ G E ++VTY+ +I+ LC+    
Sbjct: 406 RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMR 465

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A+ +L     +G+ PDA++++ +I AYCK+G++ +A   L  M +  C  ++V Y  +
Sbjct: 466 KHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTIL 525

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           ++  C  G    A+    K+   G  PN +++N +  A++++
Sbjct: 526 ISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 132/323 (40%), Gaps = 52/323 (16%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  L+     AG  D ++     M ++GCKP+VV+                       
Sbjct: 310 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV----------------------- 346

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                      Y  +I   CK    + A  ++D++      P+ VT+N +IG LC  G +
Sbjct: 347 -----------YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 395

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
             A  VF  + R+ C P   TY  L+     EG    A  ++ EM               
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM--------------- 440

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               + G +  +++YN ++  L  M   +    L+  M+ +G++P+  T++ +I + C++
Sbjct: 441 ---LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKE 497

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK   A  +L          +  +Y  LIS  C  G+L  A+ +L  M+ +G  P+   +
Sbjct: 498 GKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 557

Query: 338 NTILAAFCKNGNADQALEIFEKL 360
           N ++ A   N      + +F+ +
Sbjct: 558 NVLVRAIFTNIGTIGPIHLFKYI 580



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 34/193 (17%)

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + AF + G+AD+AL+ F + SD+GC                                   
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCR---------------------------------- 65

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P    YN L+  L R+ MV   V +  +M      P V +YN++I   C+  R++ + +
Sbjct: 66  DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 125

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPL 520
           +L  M  KGC P+E ++  ++ G+   G   EA       V + A        L   F +
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 185

Query: 521 LDVYKEISHLATK 533
            +V+  ++ +  +
Sbjct: 186 WEVFSVVNEMVQR 198


>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
          Length = 975

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 20/509 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +V  + E   +   L   + E     L+    + G+ D+++     MV+ G   D+ M +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA----NKVLDR 131
            LI+   Q++   +AV++ + ++  G  PDV     +I  FC+     +     N+  + 
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEG 190
           L+S    P    YN+++  L   G +E+A+    QLLR   C    +   +   A ML  
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAY----QLLRSMVCGGQAVNNDVAGGAHMLHI 432

Query: 191 QTDKAMKLLDEM-----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
           + D A    D       G+CK   +  A    + + S GC+  ++ +N L+  L NM + 
Sbjct: 433 RED-AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRL 491

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           EEG  +  +M   GL P+  TY+ L   +CR    + A+D+LR  +  G  P   +   +
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEM 551

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +   C  GR+  A++FLD M+  G LPDIV Y+  +   C  G  D AL +F  +S    
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYY 611

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V ++N + +    S     A  ++ EML KG+ P  +TYN +I   C+ G +++A+ 
Sbjct: 612 LPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAIS 671

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L  M     +PTVI+Y  +I GFC   R +E+I++   M EKGC PN   Y   I G+ 
Sbjct: 672 YLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLR 731

Query: 486 YGGWRAEAMELANALVSMHAISRDTFKRL 514
             G    A+     +V+      DTF  L
Sbjct: 732 KCGRIETALTYFEEMVT-KGFELDTFSLL 759



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 163/334 (48%), Gaps = 17/334 (5%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+  ++N ++ G CK  ++++A  +   + S G    ++ +N +I  LC+   +E  +
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------M 204
            +F+Q+      P+  TY  L            A+ LL EM                  +
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A QF+  +   G  PD+++Y+  +  + N G+ ++   L  ++  +   P+V
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V ++ILI+   +  K ++A  ++    EKGL P   +Y+ +I   CK GR++ AI +LD 
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+ +   P ++ Y +++  FC  G  D+A++++ ++ + GC PN  +Y    + L   G 
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
              AL    EM++KG E D  +    I+ L  +G
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNG 769



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 23/387 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D +L   + M++ GCK  ++M   LI +     +  +   +   ++  G  P  F YN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +L  G C+    + A  +L  +++ G  P +     M+  LC  G +  A +  D +L+ 
Sbjct: 515 SLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P ++TY+  +                   GMC  G V  A    R +  +   PDV+
Sbjct: 575 GFLPDIVTYSAAMN------------------GMCNTGEVDDALHLFRDISCKYYLPDVV 616

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N+L+       K +E +K+M EM+ +GL P+VVTY+++I   C+ G+ E A+  L   
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +   P   +Y  LI  +C  GR D AI+    M   GC P+ + Y   +    K G  
Sbjct: 677 VYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRI 736

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL  FE++   G   +  S     + L S+G  ++   ++ E+L K    + +    L
Sbjct: 737 ETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKDTYGNNLKMVGL 796

Query: 411 IS----CLCRDGMVDEAVGLLVDMEST 433
           I+     L +DG+    +   VD   T
Sbjct: 797 INEAVVELSKDGITSSDILKFVDKAYT 823



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 177/448 (39%), Gaps = 74/448 (16%)

Query: 123 ELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           + A +  D  R S G +P+  TYN ++ +L   G  + A     +++      +V  YT+
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTL 214

Query: 182 --LIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESR 223
             L++     G+ D A  +   M                   K G V  A + + S+E+ 
Sbjct: 215 TSLLRCYCNAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEAL 274

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +    + ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      A
Sbjct: 275 GMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARA 334

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKD------------------------------- 312
           V + +  K  G+ PD      +I A+C++                               
Sbjct: 335 VKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLE 394

Query: 313 -----GRLDLAIEFLDYMISDG-------------------CLPDIVNYNTILAAFCKNG 348
                G ++ A + L  M+  G                     P+  ++N ++   CK  
Sbjct: 395 ELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVK 454

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D AL + + +  +GC   +  +N +   L +        G+ ++M   G+ P E TYN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SL   +CR      A+ LL +M++    P + +   ++   C + R+ E+++ L  M + 
Sbjct: 515 SLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G  P+  TY   + G+   G   +A+ L
Sbjct: 575 GFLPDIVTYSAAMNGMCNTGEVDDALHL 602



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/475 (19%), Positives = 182/475 (38%), Gaps = 83/475 (17%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           ++ NA+ S   +  +  L     D + +R   +P  + +  ++  L + G+ ++A + FD
Sbjct: 105 YSLNAMASLLPRHQRAHLDRLAADAISARCLMTPGALGF--LLRCLGAAGLPDTAVRAFD 162

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQ----------- 212
                  C P   TY  L+ A    G+ D A   L EM   C  G V +           
Sbjct: 163 AARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYC 222

Query: 213 -----------------------------------------AFQFVRSLESRGCQPDVIS 231
                                                    A + + S+E+ G +    +
Sbjct: 223 NAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKT 282

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      AV + +  K
Sbjct: 283 LSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMK 342

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFL----DYMISDGCLPDIVNYNTILAAFCKN 347
             G+ PD      +I A+C++G   +   F+    +Y+ S   +P    YN +L      
Sbjct: 343 SSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVP---LYNVVLEELVHC 399

Query: 348 GNADQALEIFEKL--------SDVG-----------CPPNVSSYNTMFSALWSSGDKIRA 388
           G  + A ++   +        +DV              PN  S+N +   L        A
Sbjct: 400 GEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMA 459

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +  +M+S G +   + +N LI  LC    ++E  G+   M+     P+  +YN +  G
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            C+ +    ++++L  M   G  P       +++ + + G   EA++  + ++ +
Sbjct: 520 ICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 236/474 (49%), Gaps = 56/474 (11%)

Query: 87  KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
           ++ ++   + +L+   E ++   N +++GFC+  +++ A +++DR+R++G +P+VVT+N 
Sbjct: 186 RAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNG 245

Query: 147 MIGSLCSRGMIESAFKVFDQLL----RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            I +LC  G +  A+++F+ +     +   +P  +T+ +++                   
Sbjct: 246 RISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLS------------------ 287

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C  GMV +A   V  +   G    V SYN  L  L+  G+  E ++L++EM   G++P
Sbjct: 288 GFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQP 347

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  TY+I++  LC++GK  D   V    +   +TPD  +Y  L+ AYC  G    A   L
Sbjct: 348 NSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRIL 407

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--- 379
           D M   GC P++  YN +L +  K G   +   + E++S+ G   + +S N +   L   
Sbjct: 408 DEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRN 467

Query: 380 -------------WSSGD-KIRALG-----MISE-MLSKGIEPDEITYNSLISCLCRDGM 419
                        W+ G   +R LG     ++S+  +SK   PD ITY++L++ LC++G 
Sbjct: 468 SKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGR 527

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
            DEA   LV+M      P  + Y+  I G+C   + + +I+VL  M ++ C P+  +Y L
Sbjct: 528 FDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNL 587

Query: 480 LIEGIGYGGWRAEAMELANAL----VSMHAISRDTFKR-------LNRTFPLLD 522
           LI G        E ++L + +    +S + ++ ++  +       +N+  PLLD
Sbjct: 588 LIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLD 641



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 235/515 (45%), Gaps = 53/515 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----- 103
           R G+ DE+   ++ M A G  P+VV     I    +  +  +A R+   +++  E     
Sbjct: 217 REGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPR 276

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD   ++ ++SGFC A  ++ A  ++D +R  GF   V +YN  +  L   G +  A ++
Sbjct: 277 PDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQEL 336

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++  +  +P   TY I++     EG+     ++ D +                   C 
Sbjct: 337 LSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCS 396

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           KG    A + +  +  +GC P++ +YN+LL++LL  G+  E E+L+  M  +G   +  +
Sbjct: 397 KGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTAS 456

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKG-----------------------LTPDAYSYD 303
            +I+I  LCR+ K E A+D++     +G                         PD  +Y 
Sbjct: 457 CNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYS 516

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            L++A CK+GR D A + L  MI     PD V Y+T +  +C +G    A+++   +   
Sbjct: 517 TLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKR 576

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRA---LGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            C P+  SYN +   +W   +K ++   L ++SEM  KGI  + +TYNSLI   C  GMV
Sbjct: 577 SCNPSTRSYNLL---IWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMV 633

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           ++A+ LL +M      P V S+ ++I  FCKT   + +  V        C   E  Y L+
Sbjct: 634 NKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST-CGQKEVLYCLM 692

Query: 481 IEGIG-YGGWRAEAMELANALVSMHAISRDTFKRL 514
              +  Y  W      L  AL    +I    +KR+
Sbjct: 693 CTELSTYARWIEAKNILETALEMRISIQSFPYKRI 727



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 203/455 (44%), Gaps = 54/455 (11%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YN L+    + ++++L   +   L   G +PDV T N ++ +L + G ++ A +V
Sbjct: 106 PPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRV 165

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------GMCKKGMV 210
           FD +   N      +  IL +     G++  A+ +LD M             G C++G V
Sbjct: 166 FDAMPARN----EFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRV 221

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL---MTEMISRGL-EPNVVT 266
            +A + V  + ++G  P+V+++N  +  L   G+  E  ++   M E   +GL  P+ VT
Sbjct: 222 DEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVT 281

Query: 267 YSILISSLCRDGKTEDA---VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           + +++S  C  G  ++A   VD++R     G      SY+  +S   K+GR+  A E L 
Sbjct: 282 FDVMLSGFCDAGMVDEATVLVDIMRCG---GFLRKVESYNRWLSGLVKNGRVGEAQELLS 338

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M  +G  P+   YN I+   CK G A     + + +      P+V +Y ++  A  S G
Sbjct: 339 EMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKG 398

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           +   A  ++ EM  KG  P+  TYN L+  L + G   E   LL  M    +     S N
Sbjct: 399 NTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCN 458

Query: 444 IIILGFCKTRRINESIEVLAAMFEKG-----------------------CKPNETTYVLL 480
           III G C+  ++  +++++  M+ +G                       C P+  TY  L
Sbjct: 459 IIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTL 518

Query: 481 IEGIGYGGWRAEA----MELANALVSMHAISRDTF 511
           +  +   G   EA    +E+    +S  ++  DTF
Sbjct: 519 MNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTF 553



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 14/276 (5%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF+ +R+L   G  P    YN LL   L   + +  E L  +++  G  P+V T + L+ 
Sbjct: 94  AFRSLRALG--GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLE 151

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +L   G+ + A  V  A   +    + +S   L   YC+ GR   A+  LD M       
Sbjct: 152 ALSAAGRMDLARRVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMPE----M 203

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V  NT++A FC+ G  D+A  + +++   G  PNV ++N   SAL  +G  + A  + 
Sbjct: 204 NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIF 263

Query: 393 SEM---LSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           ++M     +G+  PD++T++ ++S  C  GMVDEA  L+  M    F   V SYN  + G
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             K  R+ E+ E+L+ M  +G +PN  TY ++++G+
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGL 359



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 20/267 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+FDE+   +  M+     PD V+    I  +    K++ A++V+  +EK    P   
Sbjct: 524 KEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTR 583

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI GF +  + +   K++  ++ +G S +V+TYN +I S C RGM+  A  + D++
Sbjct: 584 SYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEM 643

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L++   P V ++ +LI+A                   CK      A Q V  +    C  
Sbjct: 644 LQNEIVPNVTSFGLLIKA------------------FCKTADFSAA-QRVFDVALSTCGQ 684

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
             + Y ++   L    +W E + ++   +   +      Y  +I+ LC   + + A  +L
Sbjct: 685 KEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLL 744

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGR 314
           +    KG + D  ++ P+I A  + G+
Sbjct: 745 KLFIAKGYSFDPATFMPVIDALSESGK 771


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 219/478 (45%), Gaps = 52/478 (10%)

Query: 49  RAGKFDESLYFIESMVANG----CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP 104
           RAGK  E+      M  +      +P+VV    ++K F +      A  ++E ++K G  
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325

Query: 105 DVF-AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           D    YN  + G  +  ++  A  VLD + ++G  P+  TYNIM+  LC   M+  A  +
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            D ++R+   P  + Y+ L+                   G C +G V +A   +  +   
Sbjct: 386 MDLMMRNGVYPDTVAYSTLLH------------------GYCSRGKVFEAKSVLHEMIRN 427

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GCQP+  + N LL +L   G+  E E+++ +M  +  +P+ VT +I+++ LCR+G+ + A
Sbjct: 428 GCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKA 487

Query: 284 VDVLRAAKEKGLT----------------------PDAYSYDPLISAYCKDGRLDLAIEF 321
            +++      G T                      PD  +Y  LI+  CK GRL+ A + 
Sbjct: 488 SEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKK 547

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M++    PD V Y+T + +FCK G    A  + + +   GC   + +YN +   L S
Sbjct: 548 FIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGS 607

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +       G+  EM  KGI PD  TYN++I+CLC  G   +A+ LL +M      P V S
Sbjct: 608 NNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSS 667

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKG---CKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + I+I  F K+       +V   +FE     C   E  Y L+   +  GG  +EA EL
Sbjct: 668 FKILIKAFSKS----SDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKEL 721



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 224/523 (42%), Gaps = 79/523 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI     +  FD +L   E M   GC P+      L++   +     +A+ ++    
Sbjct: 153 FNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNN 212

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                +   YN L+S FC+      A ++++R+   G  PDVVT+N  I +LC  G +  
Sbjct: 213 SCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVME 272

Query: 160 AFKVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           A ++F  +  D      +P V+T+ ++++                  G CK GM+G A  
Sbjct: 273 ASRIFRDMQMDAELGLPRPNVVTFNLMLK------------------GFCKHGMMGDARG 314

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            V +++  G    +  YN+ L  LL  G+  E   ++ EM+++G+EPN  TY+I++  LC
Sbjct: 315 LVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLC 374

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP--- 332
           R+    DA  ++      G+ PD  +Y  L+  YC  G++  A   L  MI +GC P   
Sbjct: 375 RNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTY 434

Query: 333 --------------------------------DIVNYNTILAAFCKNGNADQALEIFEKL 360
                                           D V  N ++   C+NG  D+A EI  ++
Sbjct: 435 TCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494

Query: 361 SDVG----------------------CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
              G                      C P+  +Y T+ + L   G    A     EML+K
Sbjct: 495 WTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK 554

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            + PD +TY++ I   C+ G +  A  +L DME      T+ +YN +ILG     +I E 
Sbjct: 555 NLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEI 614

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +   M EKG  P+  TY  +I  +  GG   +A+ L + ++
Sbjct: 615 YGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEML 657



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 206/466 (44%), Gaps = 43/466 (9%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E++ K  EP+ + YN ++ G C+ + +  A  ++D +   G  PD V Y+ ++   CSRG
Sbjct: 353 EMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRG 412

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +  A  V  +++R+ C+P   T   L+ +   EG+T +A ++L +M             
Sbjct: 413 KVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCN 472

Query: 203 ----GMCKKGMVGQAFQFVRSLESRG----------------------CQPDVISYNMLL 236
               G+C+ G + +A + V  + + G                      C PD I+Y  L+
Sbjct: 473 IVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLI 532

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L  +G+ EE +K   EM+++ L P+ VTY   I S C+ GK   A  VL+  +  G +
Sbjct: 533 NGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCS 592

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
               +Y+ LI     + ++       D M   G  PDI  YN I+   C+ G A  A+ +
Sbjct: 593 KTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISL 652

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++ D G  PNVSS+  +  A   S D  +    + E+        E  Y+ + + L  
Sbjct: 653 LHEMLDKGISPNVSSFKILIKAFSKSSD-FKVACELFEVALNICGRKEALYSLMFNELLA 711

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G + EA  L               Y  +I   C+  R+ ++  +L  + +KG   +  +
Sbjct: 712 GGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHAS 771

Query: 477 YVLLIEGIGYGGWRAEAMELANALVSMHAISRD---TFKRLNRTFP 519
           ++ +I+G+   G + +A ELA  ++ +    R    T+    R  P
Sbjct: 772 FMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVIP 817



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/492 (21%), Positives = 226/492 (45%), Gaps = 49/492 (9%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNK 90
           + +     + +++   + G  D+++   +S+ A      P + +   L++   +  +   
Sbjct: 74  YHIAHPSLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGF 133

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
              +  ++L     P  + +N LI   C++   + A ++ +++  +G  P+  T  I++ 
Sbjct: 134 VSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVR 193

Query: 150 SLCSRGMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            LC  G+++ A ++ +    ++C+    + Y  L+     E   ++A +L++ M      
Sbjct: 194 GLCRAGLVKQALELVNN--NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVL 251

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRG----CQPDVISYNMLLRTLLNMGKWEE 247
                       +C+ G V +A +  R ++        +P+V+++N++L+     G   +
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              L+  M   G   ++  Y+I +  L R+G+  +A  VL     KG+ P+AY+Y+ ++ 
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             C++  L  A   +D M+ +G  PD V Y+T+L  +C  G   +A  +  ++   GC P
Sbjct: 372 GLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQP 431

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  + NT+  +LW  G  + A  M+ +M  K  +PD +T N +++ LCR+G +D+A  ++
Sbjct: 432 NTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIV 491

Query: 428 VDMES----------------------TRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            +M +                      +   P  I+Y  +I G CK  R+ E+ +    M
Sbjct: 492 SEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEM 551

Query: 466 FEKGCKPNETTY 477
             K  +P+  TY
Sbjct: 552 LAKNLRPDSVTY 563



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 191/411 (46%), Gaps = 25/411 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  YN L+    + ++    + +   + +   +P   T+N++I SLC     + A ++
Sbjct: 113 PSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQL 172

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F+++ +  C P   T  IL++                  G+C+ G+V QA + V +  S 
Sbjct: 173 FEKMPQKGCCPNEFTLGILVR------------------GLCRAGLVKQALELVNNNNS- 213

Query: 224 GCQ-PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            C+  + + YN L+          E E+L+  M   G+ P+VVT++  IS+LCR GK  +
Sbjct: 214 -CRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVME 272

Query: 283 AVDVLRAAK---EKGLT-PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           A  + R  +   E GL  P+  +++ ++  +CK G +  A   ++ M   G    +  YN
Sbjct: 273 ASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYN 332

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
             L    +NG   +A  + +++   G  PN  +YN M   L  +     A G++  M+  
Sbjct: 333 IWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRN 392

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+ PD + Y++L+   C  G V EA  +L +M     +P   + N ++    K  R  E+
Sbjct: 393 GVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEA 452

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            E+L  M EK  +P+  T  +++ G+   G   +A E+ + + +    S D
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLD 503



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 169/387 (43%), Gaps = 74/387 (19%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAY 109
           GK  E+   +  M+ NGC+P+   C  L+   ++E ++ +A  +++ + EK  +PD    
Sbjct: 412 GKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTC 471

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFS----------------------PDVVTYNIM 147
           N +++G C+  +++ A++++  + + G +                      PD +TY  +
Sbjct: 472 NIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTL 531

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           I  LC  G +E A K F ++L  N +P  +TY   I +   +G+   A ++L +M     
Sbjct: 532 INGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGC 591

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G+     + + +     ++ +G  PD+ +YN ++  L   GK ++   
Sbjct: 592 SKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAIS 651

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRD--------------------------------- 277
           L+ EM+ +G+ PNV ++ ILI +  +                                  
Sbjct: 652 LLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLA 711

Query: 278 -GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+  +A ++   + ++ LT   + Y  LI+  C+D RL  A   L  +I  G   D  +
Sbjct: 712 GGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHAS 771

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDV 363
           +  ++    K GN  QA E+ +++ ++
Sbjct: 772 FMPVIDGLSKRGNKRQADELAKRMMEL 798



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 47/301 (15%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR--GLEPNVVTYSILISSLCRDGKTEDA 283
            P +IS   ++R L  +G  ++       + ++   L P++  Y++L+ S  R  +    
Sbjct: 78  HPSLIS---MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFV 134

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +        + P  Y+++ LI + C+    D A++  + M   GC P+      ++  
Sbjct: 135 SWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRG 194

Query: 344 FCKNGNADQALEIFEKLSDVGCP-PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            C+ G   QALE+    ++  C   N   YNT+ S          A  ++  M   G+ P
Sbjct: 195 LCRAGLVKQALELVN--NNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLP 252

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDM----ESTRFRPTVISYNIIILGFCK------T 452
           D +T+NS IS LCR G V EA  +  DM    E    RP V+++N+++ GFCK       
Sbjct: 253 DVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDA 312

Query: 453 RRINESIE-----------------------------VLAAMFEKGCKPNETTYVLLIEG 483
           R + E+++                             VL  M  KG +PN  TY ++++G
Sbjct: 313 RGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDG 372

Query: 484 I 484
           +
Sbjct: 373 L 373



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%)

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P    YN L+    R         L  DM + R  P   ++N++I   C++R  + ++
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           ++   M +KGC PNE T  +L+ G+   G   +A+EL N   S    +R  +  L   F
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRF 229


>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
          Length = 375

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 194/378 (51%), Gaps = 54/378 (14%)

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
           + C+P  +TY ++I A                  MC++G V QA + + SL SR C+P+ 
Sbjct: 4   EGCEPNNVTYNVIIDA------------------MCREGDVDQARELLNSLPSRSCKPNT 45

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN +L+   ++ +W +  +++ E++S    PN  T ++ I++LCR G  +     L  
Sbjct: 46  VNYNTVLKGFCSIERWVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEK 105

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA------ 343
             + G T +  +Y+ +I   C+ G +D A+E L  M S GC PDIV YNT+L        
Sbjct: 106 MSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 165

Query: 344 -----------------------------FCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
                                        +C+ G   QALE+F+++ + GC PN ++Y+T
Sbjct: 166 WEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYST 225

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L  +    +AL +++EM +KG   D++ Y  L   L ++  ++E V ++  ++ + 
Sbjct: 226 IIGGLVKASKMEQALELLNEMANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQDSG 284

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P  + YN ++LG C+  + N +I+VLA M   GC P+E+TY++LIEG+ Y G+  EA 
Sbjct: 285 ISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEAR 344

Query: 495 ELANALVSMHAISRDTFK 512
           EL + L S   +S    K
Sbjct: 345 ELLSRLCSRDVLSNSLIK 362



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 188/366 (51%), Gaps = 20/366 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFCKANQ 121
           M A GC+P+ V    +I    +E   ++A  ++  L  +  +P+   YN ++ GFC   +
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              AN++LD + S    P+  T N+ I +LC +G+++   +  +++ +  C   V+TY  
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           +I                   G+C++G V  A + + +++S GC+PD+++YN +L+ L +
Sbjct: 121 IIG------------------GLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 162

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
             +WE+ E+LM +M       +  T++ +IS  C+ G    A++V +   EKG  P++ +
Sbjct: 163 ADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTT 222

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I    K  +++ A+E L+ M + G   D + Y  +  +  K    ++ +++  KL 
Sbjct: 223 YSTIIGGLVKASKMEQALELLNEMANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQ 281

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D G  P    YNT+   L  +G    A+ ++++M+S G  PDE TY  LI  L  +G + 
Sbjct: 282 DSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLK 341

Query: 422 EAVGLL 427
           EA  LL
Sbjct: 342 EARELL 347



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 2/280 (0%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M + G EPN VTY+++I ++CR+G  + A ++L +   +   P+  +Y+ ++  +C   R
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A E LD ++S+ C P+    N  +   C+ G   +     EK+S  GC  NV +YN 
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-EST 433
           +   L   G+   AL ++S M S G +PD +TYN+++  LC     ++A  L++ M ++ 
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R R    ++N II  +C+   I +++EV   M EKGC PN TTY  +I G+       +A
Sbjct: 181 RLRDNS-TFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQA 239

Query: 494 MELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
           +EL N + +    +   +  L ++    D  +E+  +  K
Sbjct: 240 LELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHK 279



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 52/337 (15%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G  D++   + S+ +  CKP+ V    ++K F    +   A  ++ E++ +   P+  
Sbjct: 22  REGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEILDEVVSENCPPNEA 81

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N  I+  C+   ++   + L+++   G + +VVTYN +IG LC +G ++SA ++   +
Sbjct: 82  TLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNM 141

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMV 210
               CKP ++TY  +++      + + A +L+ +M                   C+KG++
Sbjct: 142 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLI 201

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG----------- 259
            QA +  + +  +GC P+  +Y+ ++  L+   K E+  +L+ EM ++G           
Sbjct: 202 LQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLT 261

Query: 260 -----------------------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                                  + P  V Y+ ++  LCR+GKT  A+DVL      G  
Sbjct: 262 KSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCM 321

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           PD  +Y  LI     +G L  A E L  + S   L +
Sbjct: 322 PDESTYIILIEGLFYEGYLKEARELLSRLCSRDVLSN 358



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 150/308 (48%), Gaps = 30/308 (9%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
            ++ +V+  C P+       I    ++    K  R +E + K+G   +V  YNA+I G C
Sbjct: 67  ILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLC 126

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL-----LRDNC 172
           +   ++ A ++L  ++S G  PD+VTYN ++  LCS    E A ++  ++     LRDN 
Sbjct: 127 EQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNS 186

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
                T+  +I     +G   +A+++  +M                    +GC P+  +Y
Sbjct: 187 -----TFNTIISFWCQKGLILQALEVFKQM------------------PEKGCNPNSTTY 223

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + ++  L+   K E+  +L+ EM ++G   + + Y +L  SL ++ K E+ V V+   ++
Sbjct: 224 STIIGGLVKASKMEQALELLNEMANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQD 282

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G++P    Y+ ++   C++G+ + AI+ L  M+S GC+PD   Y  ++      G   +
Sbjct: 283 SGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKE 342

Query: 353 ALEIFEKL 360
           A E+  +L
Sbjct: 343 ARELLSRL 350



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 71/165 (43%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + F  +I    + G   ++L   + M   GC P+    + +I    +  K  +A+ ++  
Sbjct: 186 STFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNE 245

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +   G      Y  L     K ++IE   +V+ +L+  G SP  V YN ++  LC  G  
Sbjct: 246 MANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 305

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
             A  V   ++   C P   TY ILI+    EG   +A +LL  +
Sbjct: 306 NYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRL 350


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 209/451 (46%), Gaps = 18/451 (3%)

Query: 52   KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
            + +E L  IE+    GC P VV    LI  + +     + + ++  +E  G  P +  Y 
Sbjct: 1162 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYG 1221

Query: 111  ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            +LI+   K   +E    +   +R RGFSP+V  YN +I +LC       A  +  Q+   
Sbjct: 1222 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFAS 1281

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVGQA 213
             C P +IT+  LI     EG   KA   L E                  G C +G +  A
Sbjct: 1282 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1341

Query: 214  FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               +  +  RG  PDV+++  L+  L+  GK  E   +  +M  R + P+V  Y++LIS 
Sbjct: 1342 SDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 1401

Query: 274  LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            LC+      A ++L    EK + PD + Y  LI  + +   L  A +  ++M   G  PD
Sbjct: 1402 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPD 1461

Query: 334  IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            IV+ N ++  +C+ G   +A+     +  VGC P+  +Y T+ S     G+   AL  + 
Sbjct: 1462 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1521

Query: 394  EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            +M+ +  +P+ +TY+SLI+  C+ G  D A GL  +M++    P V++Y I+I    K  
Sbjct: 1522 DMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKD 1581

Query: 454  RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++  +      M    C PN+ T   L+ G+
Sbjct: 1582 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 202/423 (47%), Gaps = 19/423 (4%)

Query: 67   GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
            G  P+V  C +L+K   ++R+ + A ++  E+L K    D ++   L+ G C   ++E  
Sbjct: 1107 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 1166

Query: 126  NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             K+++     G  P VV YN++I   C RG +     +  ++      PT++TY  LI  
Sbjct: 1167 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINW 1226

Query: 186  TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
               +G  +K   L  EM                    RG  P+V  YN ++  L      
Sbjct: 1227 LGKKGDLEKIGSLFLEM------------------RKRGFSPNVQIYNSVIDALCKCRSA 1268

Query: 246  EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
             +   ++ +M + G +P+++T++ LI+ LC +G    A   LR A  + L P+  SY PL
Sbjct: 1269 TQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPL 1328

Query: 306  ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
            I  +C  G L +A + L  M+  G  PD+V +  ++      G   +AL + EK+++   
Sbjct: 1329 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1388

Query: 366  PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             P+V+ YN + S L        A  ++ EML K ++PDE  Y +LI    R   + +A  
Sbjct: 1389 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1448

Query: 426  LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            +   ME     P ++S N +I G+C+   ++E+I  ++ M + GC P+E TY  +I G  
Sbjct: 1449 IFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 1508

Query: 486  YGG 488
              G
Sbjct: 1509 KQG 1511



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 205/456 (44%), Gaps = 38/456 (8%)

Query: 55   ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALI 113
            +++  ++ M A+GC PD++    LI     E    KA   + E + +   P+  +Y  LI
Sbjct: 1270 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1329

Query: 114  SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
             GFC   ++ +A+ +L  +  RG +PDVVT+  +I  L   G +  A  V +++      
Sbjct: 1330 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1389

Query: 174  PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
            P V  Y +LI                   G+CKK M+  A   +  +  +  QPD   Y 
Sbjct: 1390 PDVNIYNVLIS------------------GLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1431

Query: 234  MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
             L+   +      +  K+   M  +G+ P++V+ + +I   C+ G   +A+  +   ++ 
Sbjct: 1432 TLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 1491

Query: 294  GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            G  PD ++Y  +IS Y K G L+ A+ +L  MI   C P++V Y++++  +CK G+ D A
Sbjct: 1492 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFA 1551

Query: 354  LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY----NS 409
              +F  +      PNV +Y  +  +L+     +RA      ML     P+++T     N 
Sbjct: 1552 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1611

Query: 410  LISCL--------CRDGMVDEAVGLLVDMESTRFR---PTVISYNIIILGFCKTRRINES 458
            L SC         C    V     LLV  +   F    P   +YN II   C+   + E+
Sbjct: 1612 LTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREA 1671

Query: 459  IEVLAAMFEKGCKPNETTYVLLIEGIGYGG----WR 490
            ++    M +KG  PN  T++ L+ G    G    WR
Sbjct: 1672 LDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1707



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 1/288 (0%)

Query: 208  GMVGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            GM+G+A +   R  E  G  P+V   N LL+ L+   +W++  KL  EM+ +    +  +
Sbjct: 1090 GMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYS 1149

Query: 267  YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
              +L+  LC + + E+ + ++ A    G  P    Y+ LI  YC+ G +   +  L  M 
Sbjct: 1150 TCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 1209

Query: 327  SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            + G LP +V Y +++    K G+ ++   +F ++   G  PNV  YN++  AL       
Sbjct: 1210 TKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSAT 1269

Query: 387  RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            +A+ ++ +M + G +PD IT+N+LI+ LC +G V +A   L +       P  +SY  +I
Sbjct: 1270 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1329

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             GFC    +  + ++L  M  +G  P+  T+  LI G+   G  +EA+
Sbjct: 1330 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1377



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
            +IK   + G   E++  + +M   GC PD    T +I  + ++   N A+R + +++++ 
Sbjct: 1468 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1527

Query: 102  GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             +P+V  Y++LI+G+CK    + A  +   +++   SP+VVTY I+IGSL  +  +  A 
Sbjct: 1528 CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1587

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV--RS 219
              F+ +L ++C P  +T   L+      G T     +++ +      + G+    V  + 
Sbjct: 1588 LYFETMLLNHCSPNDVTLHYLVN-----GLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1642

Query: 220  LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            L      P   +YN ++ +L       E       M  +G  PN +T+  L+   C  GK
Sbjct: 1643 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702

Query: 280  TEDAVDVL 287
            + +   +L
Sbjct: 1703 SVNWRTIL 1710


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 217/432 (50%), Gaps = 19/432 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F +L+    RAGK   ++  +  M  +GC PD+ +C   +       + +KA+   E +
Sbjct: 131 EFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 190

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G EPDV+ YN LI G C A ++  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 191 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 250

Query: 158 ESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG--- 203
           E    +  ++  D    P  +TY +LI      G  D+A++ L          DE+G   
Sbjct: 251 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 310

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C  G + +A + V  + S+GCQPDV++Y+ ++     +G+ ++  K+M  M    
Sbjct: 311 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 370

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN VT++ L++ LC+ GKT +A ++L  ++E+  TP   +Y  ++  + ++G+L  + 
Sbjct: 371 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 430

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N ++ A CK+G   +A +  E+    GC  NV ++ T+    
Sbjct: 431 DVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 490

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   AL ++ +M      PD +TY  ++  L + G + EA GL+  M +    PT 
Sbjct: 491 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTP 550

Query: 440 ISYNIIILGFCK 451
           ++Y  +I  +C+
Sbjct: 551 VTYRTVIHRYCE 562



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 196/430 (45%), Gaps = 54/430 (12%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           +  L+  + +A ++  A +VL  ++  G +PD+   N+ +  L   G ++ A +  +++ 
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R   +P V TY  LI+                  G+C    V  A + +  +   GC PD
Sbjct: 192 RVGVEPDVYTYNCLIK------------------GLCGARRVVDAMEMIGVMLQNGCPPD 233

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            ISY  ++  L    + EE   L+  M +  GL P+ VTY++LI  L + G  ++A++ L
Sbjct: 234 KISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFL 293

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R ++ K    D   Y  ++ ++C +GR+  A E +  MIS GC PD+V Y+T++  FC+ 
Sbjct: 294 RESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRI 353

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSAL--------------------WSSGDKIR 387
           G  DQA ++ + +    C PN  ++  + + L                    W+  D   
Sbjct: 354 GELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITY 413

Query: 388 ALGM---------------ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           ++ M               + +ML KG  P  +  N LI  LC+DG   EA   +   +S
Sbjct: 414 SVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQS 473

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                 V+++  +I GF +   +  ++ ++  M+     P+  TY ++++ +G  G   E
Sbjct: 474 KGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKE 533

Query: 493 AMELANALVS 502
           A  L   +++
Sbjct: 534 ATGLVEKMLN 543



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 169/340 (49%), Gaps = 10/340 (2%)

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE------MGMCKKGMVGQAFQFVRS 219
           +L+RD C+   +  +    +  LE Q    +++L        +    +G V +AF+F R 
Sbjct: 63  RLVRDTCRLLELRESW---SPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRW 119

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            + +        +  L+ +    GK     +++  M   G  P++   ++ ++ L   G+
Sbjct: 120 ADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGR 179

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + A++     +  G+ PD Y+Y+ LI   C   R+  A+E +  M+ +GC PD ++Y T
Sbjct: 180 VDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT 239

Query: 340 ILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++  CK    ++   + +++ +D G  P+  +YN +   L   G    AL  + E   K
Sbjct: 240 VMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGK 299

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
               DE+ Y++++   C +G + EA  ++ +M S   +P V++Y+ ++ GFC+   ++++
Sbjct: 300 RFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQA 359

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
            +++  M++  CKPN  T+  L+ G+   G  +EA EL N
Sbjct: 360 RKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 399



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 175/372 (47%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V E  +  ++      G+  E+   +  M++ GC+PDVV  + ++  F +  + ++A 
Sbjct: 301 FRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQAR 360

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K   +P+   + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 361 KMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGF 420

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G ++ +  V  Q+L+    PT +   +LI A                  +CK G   
Sbjct: 421 RREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA------------------LCKDGKPA 462

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F+   +S+GC  +V+++  ++      G  E    LM +M      P+VVTY++++
Sbjct: 463 EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVV 522

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L + G+ ++A  ++     +GL P   +Y  +I  YC+ G L+  +  L+ M++   +
Sbjct: 523 DALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM 582

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                YN ++   C  G  ++A  +  K+       +  + + +  +  + G  ++A  +
Sbjct: 583 KSA--YNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNV 640

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 641 ACRMFRRNLIPD 652



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 16/232 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R GK  ES   +  M+  G  P  V    LI    ++ K  +A   ME  +  G   +V 
Sbjct: 422 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVV 481

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I GF +   +E A  ++D +      PDVVTY +++ +L  +G ++ A  + +++
Sbjct: 482 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 541

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------GMCKKGMVGQ 212
           L     PT +TY  +I     +G  +  + LL++M                +C  G + +
Sbjct: 542 LNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNE 601

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           A+  +  +       D  + ++L+ + LN G   +   +   M  R L P+V
Sbjct: 602 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 653


>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
          Length = 975

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 20/509 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +V  + E   +   L   + E     L+    + G+ D+++     MV+ G   D+ M +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA----NKVLDR 131
            LI+   Q++   +AV++ + ++  G  PDV     +I  FC+     +     N+  + 
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEG 190
           L+S    P    YN+++  L   G +E+A+    QLLR   C    +   +   A ML  
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAY----QLLRSMVCGGQAVNNDVAGGAHMLHI 432

Query: 191 QTDKAMKLLDEM-----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
           + D A    D       G+CK   +  A    + + S GC+  ++ +N L+  L NM + 
Sbjct: 433 RED-AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRL 491

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           EEG  +  +M   GL P+  TY+ L   +CR    + A+D+LR  +  G  P   +   +
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEM 551

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +   C  GR+  A++FLD M+  G LPDIV Y+  +   C  G  D AL +F  +S    
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYY 611

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V ++N + +    S     A  ++ EML KG+ P  +TYN +I   C+ G +++A+ 
Sbjct: 612 LPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAIS 671

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L  M     +PTVI+Y  +I GFC   R +E+I++   M EKGC PN   Y   I G+ 
Sbjct: 672 YLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLR 731

Query: 486 YGGWRAEAMELANALVSMHAISRDTFKRL 514
             G    A+     +V+      DTF  L
Sbjct: 732 KCGRIETALTYFEEMVT-KGFELDTFSLL 759



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 23/387 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D +L   + M++ GCK  ++M   LI +     +  +   +   ++  G  P  F YN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +L  G C+    + A  +L  +++ G  P +     M+  LC  G +  A +  D +L+ 
Sbjct: 515 SLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P ++TY+  +                   GMC  G V  A    R +  +   PDV+
Sbjct: 575 GFLPDIVTYSAAMN------------------GMCNTGEVDDALHLFRDISCKYYLPDVV 616

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N+L+       K +E +K+M EM+ +GL P+VVTY+++I   C+ G+ E A+  L   
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +   P   +Y  LI  +C  GR D AI+    M   GC P+ + Y   +    K G  
Sbjct: 677 VYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRI 736

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL  FE++   G   +  S     + L S+G  ++   ++ E+L K    + +    L
Sbjct: 737 ETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLKEVLQKDTYGNNLKMVGL 796

Query: 411 IS----CLCRDGMVDEAVGLLVDMEST 433
           I+     L +DG+    +   VD   T
Sbjct: 797 INEAVVELSKDGITSSDILKFVDKAYT 823



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 163/334 (48%), Gaps = 17/334 (5%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+  ++N ++ G CK  ++++A  +   + S G    ++ +N +I  LC+   +E  +
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------M 204
            +F+Q+      P+  TY  L            A+ LL EM                  +
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A QF+  +   G  PD+++Y+  +  + N G+ ++   L  ++  +   P+V
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V ++ILI+   +  K ++A  ++    EKGL P   +Y+ +I   CK GR++ AI +LD 
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+ +   P ++ Y +++  FC  G  D+A++++ ++ + GC PN  +Y    + L   G 
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
              AL    EM++KG E D  +    I+ L  +G
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNG 769



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 177/448 (39%), Gaps = 74/448 (16%)

Query: 123 ELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           + A +  D  R S G +P+  TYN ++ +L   G  + A     +++      +V  YT+
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTL 214

Query: 182 --LIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESR 223
             L++     G+ D A  +   M                   K G V  A + + S+E+ 
Sbjct: 215 TSLLRCYCNAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEAL 274

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +    + ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      A
Sbjct: 275 GMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARA 334

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKD------------------------------- 312
           V + +  K  G+ PD      +I A+C++                               
Sbjct: 335 VKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLE 394

Query: 313 -----GRLDLAIEFLDYMISDG-------------------CLPDIVNYNTILAAFCKNG 348
                G ++ A + L  M+  G                     P+  ++N ++   CK  
Sbjct: 395 ELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVK 454

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D AL + + +  +GC   +  +N +   L +        G+ ++M   G+ P E TYN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SL   +CR      A+ LL +M++    P + +   ++   C + R+ E+++ L  M + 
Sbjct: 515 SLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G  P+  TY   + G+   G   +A+ L
Sbjct: 575 GFLPDIVTYSAAMNGMCNTGEVDDALHL 602



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/475 (19%), Positives = 182/475 (38%), Gaps = 83/475 (17%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           ++ NA+ S   +  +  L     D + +R   +P  + +  ++  L + G+ ++A + FD
Sbjct: 105 YSLNAMASLLPRHQRAHLDRLAADAISARCLMTPGALGF--LLRCLGAAGLPDTAVRAFD 162

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQ----------- 212
                  C P   TY  L+ A    G+ D A   L EM   C  G V +           
Sbjct: 163 AARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYC 222

Query: 213 -----------------------------------------AFQFVRSLESRGCQPDVIS 231
                                                    A + + S+E+ G +    +
Sbjct: 223 NAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKT 282

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      AV + +  K
Sbjct: 283 LSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMK 342

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFL----DYMISDGCLPDIVNYNTILAAFCKN 347
             G+ PD      +I A+C++G   +   F+    +Y+ S   +P    YN +L      
Sbjct: 343 SSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVP---LYNVVLEELVHC 399

Query: 348 GNADQALEIFEKL--------SDVG-----------CPPNVSSYNTMFSALWSSGDKIRA 388
           G  + A ++   +        +DV              PN  S+N +   L        A
Sbjct: 400 GEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMA 459

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +  +M+S G +   + +N LI  LC    ++E  G+   M+     P+  +YN +  G
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            C+ +    ++++L  M   G  P       +++ + + G   EA++  + ++ +
Sbjct: 520 ICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 243/499 (48%), Gaps = 57/499 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +++    RAG+  ++L  +  M   G +P++++C   I  F +  +  KA+R +E ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+V  YN +I G+C  +++E A ++L+ + S+G  PD V+Y  ++G LC    I 
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364

Query: 159 SAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG---- 203
               +  ++ +++   P  +TY  LI         D+A+  L          D++G    
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424

Query: 204 ---MCKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              +CK+G + +A   +  + S+G C PDV++Y  ++     +G+ ++ +KL+  M + G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484

Query: 260 LEPNVVTYSILISSLC-----------------------------------RDGKTEDAV 284
            +PN V+Y+ L++ +C                                   R+GK  +A 
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           DV+R    KG  P     + L+ + C+DGR   A +F++  ++ GC  ++VN+ T++  F
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C+N   D AL + + +  +    +V +Y T+   L   G    A  ++ +ML KGI+P  
Sbjct: 605 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY ++I   C+ G VD+ V +L  M S +   T+  YN +I   C   ++ E+  +L  
Sbjct: 665 VTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGK 722

Query: 465 MFEKGCKPNETTYVLLIEG 483
           +     + +  T   L+EG
Sbjct: 723 VLRTASRSDAKTCYALMEG 741



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 25/397 (6%)

Query: 93  RVMEILEK---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           RV+ ++++   Y  P+  A++ ++  + +A Q+  A KVL  ++  G  P+++  N  I 
Sbjct: 228 RVLVLMKRRGIYRTPE--AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
                  +E A +  +++      P V+TY  +I+                  G C    
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR------------------GYCDLHR 327

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYS 268
           V +A + +  + S+GC PD +SY  ++  L    +  E   LM +M    GL P+ VTY+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  L +    ++A+  L+ A+EKG   D   Y  ++ A CK+GR+  A + ++ M+S 
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447

Query: 329 G-CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           G C PD+V Y  ++  FC+ G  D+A ++ + +   G  PN  SY  + + +  +G  + 
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  M++        P+ ITY+ ++  L R+G + EA  ++ +M    F P  +  N+++ 
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             C+  R +E+ + +     KGC  N   +  +I G 
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 153/298 (51%), Gaps = 2/298 (0%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A + +  ++  G +P+++  N  +   +   + E+  + +  M   G+ PNVV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ +I   C   + E+A+++L     KG  PD  SY  ++   CK+ R+    + +  M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 326 ISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
             + G +PD V YNT++    K+ +AD+AL   +   + G   +   Y+ +  AL   G 
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433

Query: 385 KIRALGMISEMLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              A  +I+EMLSKG   PD +TY ++++  CR G VD+A  LL  M +   +P  +SY 
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ G C+T +  E+ E++    E    PN  TY +++ G+   G  +EA ++   +V
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 147/281 (52%), Gaps = 2/281 (0%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++ RG      +++ ++ +    G+  +  K++T M   G+EPN++  +  I    R  +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E A+  L   +  G+ P+  +Y+ +I  YC   R++ AIE L+ M S GCLPD V+Y T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352

Query: 340 ILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           I+   CK     +  ++ +K++ + G  P+  +YNT+   L        AL  + +   K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINE 457
           G   D++ Y++++  LC++G + EA  L+ +M S     P V++Y  ++ GFC+   +++
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           + ++L  M   G KPN  +Y  L+ G+   G   EA E+ N
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/413 (21%), Positives = 188/413 (45%), Gaps = 21/413 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           +  +  LI    +    DE+L+F++     G + D +  + ++    +E + ++A  ++ 
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442

Query: 96  EILEK-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+L K +  PDV  Y A+++GFC+  +++ A K+L  + + G  P+ V+Y  ++  +C  
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G    A ++ +        P  ITY++++     EG+  +A  ++ EM            
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                 +C+ G   +A +F+    ++GC  +V+++  ++       + +    ++ +M  
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
                +V TY+ L+ +L + G+  +A ++++    KG+ P   +Y  +I  YC+ G++D 
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
            +  L+ MIS      I  YN ++   C  G  ++A  +  K+       +  +   +  
Sbjct: 683 LVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
                G  + A  +   M ++ + PD      L   L   G VDEA  L++ +
Sbjct: 741 GYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRL 793



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 2/259 (0%)

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D + Y  +L  L      +   +++  M  RG+      +S ++ S  R G+  DA+ VL
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G+ P+    +  I  + +  RL+ A+ FL+ M   G +P++V YN ++  +C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEIT 406
              ++A+E+ E +   GC P+  SY T+   L      +    ++ +M  + G+ PD++T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+LI  L +    DEA+  L D +   FR   + Y+ I+   CK  R++E+ +++  M 
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 467 EKG-CKPNETTYVLLIEGI 484
            KG C P+  TY  ++ G 
Sbjct: 446 SKGHCPPDVVTYTAVVNGF 464



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 20/334 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           R G+ D++   ++ M  +G KP+ V  T L+    +  KS +A  +M + E+ +  P+  
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ ++ G  +  ++  A  V+  +  +GF P  V  N+++ SLC  G    A K  ++ 
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C   V+ +T +I       + D A+ +LD+M                  + KKG +
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 645

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + ++ +  +G  P  ++Y  ++     MGK ++   ++ +MISR  +     Y+ +
Sbjct: 646 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQV 703

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC  GK E+A  +L          DA +   L+  Y K G    A +    M +   
Sbjct: 704 IEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNL 763

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +PD+     +       G  D+A ++  +L + G
Sbjct: 764 IPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 26/238 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME---ILE 99
           L++   R G+  E+  F+E  +  GC  +VV  T +I  F Q  + + A+ V++   ++ 
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K+   DVF Y  L+    K  +I  A +++ ++  +G  P  VTY  +I   C  G ++ 
Sbjct: 625 KHA--DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682

Query: 160 AFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              + ++++ R  C+     Y  +I+   + G+ ++A  LL ++                
Sbjct: 683 LVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            G  KKG+   A++    + +R   PDV     L + L+  GK +E +KLM  ++ RG
Sbjct: 740 EGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 224/460 (48%), Gaps = 19/460 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            D+++     MV     P V+  +KL K     +  +  V +   +   G P      N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           + + +C  ++I+ A  VL      G   +VVT+N ++G L +   +  A  +F +L+R+ 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 172 -CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P  + Y  ++      G T+K + LL  M                  +CK   +  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              +  ++ +   P++ +YN L+  L  +G+WE+ + L++EM++  + PNV T+SILI  
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++GK EDA +V+R   EKG+ PD  +Y  ++  YC  G++D A    + +   G  P+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I +Y+ ++  +CK  N  +A+++F ++S  G  P+  +Y+T+   L   G    A  +  
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EML  G  PD   +++L+    + G+V+EA+ L   +E  R    +  Y ++I G CK  
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R+ E+  +   +   G  P+  TY ++I G    G   E 
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEV 502



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 225/445 (50%), Gaps = 22/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  L+   F   K  +++   + +V    C+P+ VM   ++    +   + K + ++ I+
Sbjct: 135 FNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIM 194

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           E+   +PDV  Y+ +I   CK   ++ A  +L+ ++ +   P++ TYN +I  LC  G  
Sbjct: 195 EQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQW 254

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E    +  +++  N  P V T++ILI                   G+CK+G V  A + +
Sbjct: 255 EKVKTLLSEMVNLNINPNVHTFSILID------------------GLCKEGKVEDADEVM 296

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +  +G +PD+I+Y+ ++      G+ +   ++   +  +G++PN+ +YSILI+  C+ 
Sbjct: 297 RHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKK 356

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
                A+ +     +KGL PD  +Y  ++    + GR+  A +  D M+  G  PDI  +
Sbjct: 357 KNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLH 416

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML- 396
           +T+L  + K G  ++A+ +F KL       N+S Y  + + L  + D++R    I E L 
Sbjct: 417 STLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN-DRVREAHAIFEKLP 475

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G+ PD  TYN +I+  CR+G+ DE  G+L  ME        I+YN+I+ GF ++ +I+
Sbjct: 476 SIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKIS 535

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLI 481
           E +  +  M  +G   + TT  +LI
Sbjct: 536 EIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 207/420 (49%), Gaps = 22/420 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIEL 124
           G   +VV    L+   F E K   AV + + L  EK  EP+   Y  +++G  K    E 
Sbjct: 127 GIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEK 186

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
              +L  +      PDV TY+I+I +LC    +++A  + +++ + N  P + TY  LI 
Sbjct: 187 TLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLID 246

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                GQ +K   LL EM                   +    P+V ++++L+  L   GK
Sbjct: 247 GLCKLGQWEKVKTLLSEM------------------VNLNINPNVHTFSILIDGLCKEGK 288

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            E+ +++M  MI +G+EP+++TYS ++   C  G+ + A  V    ++KG+ P+ +SY  
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           LI+ YCK   L  A++    +   G  PD V Y+TIL    + G    A +IF+++  VG
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT-YNSLISCLCRDGMVDEA 423
             P++  ++T+    +  G    A+ + S+ L +  E   I+ Y  +I+ LC++  V EA
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSK-LERNREDTNISFYTVVINGLCKNDRVREA 467

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +   + S    P V +YN++I GFC+    +E   +L  M + GC  N  TY ++++G
Sbjct: 468 HAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQG 527



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 186/384 (48%), Gaps = 18/384 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G  +++L  +  M     KPDV   + +I    ++   + A+ ++ E+ +K   P++F
Sbjct: 180 KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF 239

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G CK  Q E    +L  + +   +P+V T++I+I  LC  G +E A +V   +
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P +ITY+ ++    L GQ D+A ++ + +                 G CKK  +
Sbjct: 300 IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNL 359

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A Q    +  +G +PD ++Y+ +L  L+ +G+  + +K+  EM+  G  P++  +S L
Sbjct: 360 AKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTL 419

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +    + G  E+A+ +    +      +   Y  +I+  CK+ R+  A    + + S G 
Sbjct: 420 LFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGL 479

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD+  YN ++  FC+ G  D+   I  K+ D GCP N  +YN +    + S      + 
Sbjct: 480 IPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVS 539

Query: 391 MISEMLSKGIEPDEITYNSLISCL 414
            + EM  +G   D  T   LI+ L
Sbjct: 540 FMKEMAGRGFSFDATTTGVLINVL 563



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 62/312 (19%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H  S          LI    + GK +++   +  M+  G +PD++  + ++  +   
Sbjct: 271 PNVHTFSI---------LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            + ++A RV  +L   G +P++F+Y+ LI+G+CK   +  A ++   +  +G  PD VTY
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           + ++  L   G I  A K+FD++LR    P +  ++ L+      G  ++AM L  ++  
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 203 --------------------------------------------------GMCKKGMVGQ 212
                                                             G C++G+  +
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDE 501

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
               +R +E  GC  + I+YN++++      K  E    M EM  RG   +  T  +LI+
Sbjct: 502 VKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561

Query: 273 SLCRDGKTEDAV 284
            L  +    D +
Sbjct: 562 VLKENPSIVDMI 573



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 1/257 (0%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++   L   M+     P+V+ +S L  ++         V + R  +  G+       + +
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVG 364
            ++YC   R+D A   L   +  G   ++V +NT+L           A+ +F+KL  +  
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C PN   Y T+ + L   G   + L ++  M     +PD  TY+ +I  LC+D  +D A+
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL +M+     P + +YN +I G CK  +  +   +L+ M      PN  T+ +LI+G+
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 485 GYGGWRAEAMELANALV 501
              G   +A E+   ++
Sbjct: 284 CKEGKVEDADEVMRHMI 300



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 1/168 (0%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N +  ++C     D A  +       G P NV ++NT+   L++      A+ +  +++ 
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 398 KGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           + I EP+E+ Y ++++ L + G  ++ + LL  ME    +P V +Y+I+I   CK   ++
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            +I +L  M +K   PN  TY  LI+G+   G   +   L + +V+++
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 236/486 (48%), Gaps = 40/486 (8%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNK 90
           F      F  +I++    G+ D   Y ++ M   G  C  D+ +   +I  + Q   + +
Sbjct: 71  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAER 128

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV +   ++++G +P V  YN ++      N+I++   V   ++  GF P+V TYN+++ 
Sbjct: 129 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 188

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
           +LC    ++ A K+  ++    C P  ++YT +I +                  MC+ GM
Sbjct: 189 ALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISS------------------MCEVGM 230

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +  Q     E     P V  YN L+  L     ++ G +LM+EM+ +G+ PNV++YS 
Sbjct: 231 VKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYST 285

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD- 328
           LI+ L   G+ E A  +L    ++G  P+ ++   L+      G    A++  + MI   
Sbjct: 286 LINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF 345

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT++  FC +GN D+A+ +F  + ++GC PN+ +Y ++ +     G    A
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + + ++ML+ G  P+ + Y S++  LCR     EA  L+  M      P+V ++N  I G
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465

Query: 449 FCKTRRINESIEVLAAMFEK-GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
            C   R++ + +V   M ++  C PN  TY  L++G+            AN +   + ++
Sbjct: 466 LCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAK----------ANRIEEAYGLT 515

Query: 508 RDTFKR 513
           R+ F R
Sbjct: 516 REIFMR 521



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 25/431 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   +  K D +   +  M   GC P+ V  T +I    +     +  ++ E  E   
Sbjct: 186 LLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE--- 242

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P V  YNALI+G CK    +   +++  +  +G SP+V++Y+ +I  L + G IE AF 
Sbjct: 243 -PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GM 204
           +  Q+L+  C P + T + L++   + G T  A+ + ++M                  G 
Sbjct: 302 LLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGF 361

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G + +A      +E  GC P++ +Y  L+      G  E    +  +M++ G  PNV
Sbjct: 362 CSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNV 421

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y+ ++ +LCR  K ++A  ++    ++   P   +++  I   C  GRLD A +    
Sbjct: 422 VVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 481

Query: 325 MISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
           M     C P+IV YN +L    K    ++A  +  ++   G   + S+YNT+     ++G
Sbjct: 482 MEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAG 541

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL--VDMESTRFRPTVIS 441
               AL ++ +M+  G  PDEIT N +I   C+ G  + AV +L  V     ++RP VIS
Sbjct: 542 LPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVIS 601

Query: 442 YNIIILGFCKT 452
           Y  +I G C++
Sbjct: 602 YTNVIWGLCRS 612



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 170/344 (49%), Gaps = 24/344 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI     +G+ + +   +  M+  GC P++   + L+K  F    +  A+ +  +++
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             +G +P+V AYN L+ GFC    I+ A  V   +   G SP++ TY  +I     RG +
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A  +++++L   C P V+ YT +++A     +  +A  L++ M               
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 462

Query: 203 --GMCKKGMVGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
             G+C  G +  A +  R +E +  C P++++YN LL  L    + EE   L  E+  RG
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           +E +  TY+ L+   C  G    A+ ++      G +PD  + + +I AYCK G+ + A+
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV 582

Query: 320 EFLDYMISDG---CLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           + LD ++S G     PD+++Y  ++   C++   +  + +FE++
Sbjct: 583 QMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 261/562 (46%), Gaps = 66/562 (11%)

Query: 10  PKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFD--ESLYFIESMVANG 67
           P SN ++   SSA    + H LS  +     + +   + + G     ++L F + M+ + 
Sbjct: 35  PSSNPQI---SSANHPKSLHALSERISLQHGLPMFIHNCKKGNITSTQALQFFDLMMRS- 90

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
               ++    L+    + +  ++   + + +   G  P+ F  N LI+  C  N++    
Sbjct: 91  ----IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGL 146

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
             +  +  RG+ PDVVTY  +I  LC    I  A ++F ++ +  C P V+TY  LI+  
Sbjct: 147 SAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGL 206

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
              G  + A+KL  EM      + G       S  +  C+P++ SYN+++  L  +GKW+
Sbjct: 207 CRTGNINLALKLHQEM------LNGT------SPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E ++L  EM+ +G+ P+VVT+S LI +LC++G   +A   L     +G+ PD +++  LI
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
             +C  G LD A E    M S G  PD+++Y  ++  +CK  N ++A++++ ++  VG  
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 367 PNVSSYNTMFSALWSSGDK-----------------------------------IRALGM 391
           P++ ++  +   L+ +G                                       A+ +
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
            +E+ S  ++ D  ++N LI  LC+   ++ A  L   +     +P V++Y I+I GFCK
Sbjct: 435 FNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK 494

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV--------SM 503
             +++ +  +   M E GC PN  TY  L+ G        E ++L + ++        S+
Sbjct: 495 NGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASI 554

Query: 504 HAISRDTFKRLNRTFPLLDVYK 525
           + I  D   +  +    LD+ +
Sbjct: 555 YTIVEDMVSKDEKCREWLDILQ 576


>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
 gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
          Length = 1070

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 20/509 (3%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +V  + E   +   L   + E     L+    + G+ D+++     MV+ G   D+ M +
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA----NKVLDR 131
            LI+   Q++   +AV++ + ++  G  PDV     +I  FC+     +     N+  + 
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEG 190
           L+S    P    YN+++  L   G +E+A+    QLLR   C    +   +   A ML  
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAY----QLLRSMVCGGQAVNNDVAGGAHMLHI 432

Query: 191 QTDKAMKLLDEM-----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
           + D A    D       G+CK   +  A    + + S GC+  ++ +N L+  L NM + 
Sbjct: 433 RED-AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRL 491

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           EEG  +  +M   GL P+  TY+ L   +CR    + A+D+LR  +  G  P   +   +
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEM 551

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +   C  GR+  A++FLD M+  G LPDIV Y+  +   C  G  D AL +F  +S    
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYY 611

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V ++N + +    S     A  ++ EML KG+ P  +TYN +I   C+ G +++A+ 
Sbjct: 612 LPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAIS 671

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            L  M     +PTVI+Y  +I GFC   R +E+I++   M EKGC PN   Y   I G+ 
Sbjct: 672 YLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLR 731

Query: 486 YGGWRAEAMELANALVSMHAISRDTFKRL 514
             G    A+     +V+      DTF  L
Sbjct: 732 KCGRIETALTYFEEMVT-KGFELDTFSLL 759



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 163/334 (48%), Gaps = 17/334 (5%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+  ++N ++ G CK  ++++A  +   + S G    ++ +N +I  LC+   +E  +
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------M 204
            +F+Q+      P+  TY  L            A+ LL EM                  +
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G V +A QF+  +   G  PD+++Y+  +  + N G+ ++   L  ++  +   P+V
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V ++ILI+   +  K ++A  ++    EKGL P   +Y+ +I   CK GR++ AI +LD 
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+ +   P ++ Y +++  FC  G  D+A++++ ++ + GC PN  +Y    + L   G 
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
              AL    EM++KG E D  +    I+ L  +G
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNG 769



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 23/386 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D +L   + M++ GCK  ++M   LI +     +  +   +   ++  G  P  F YN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +L  G C+    + A  +L  +++ G  P +     M+  LC  G +  A +  D +L+ 
Sbjct: 515 SLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P ++TY+  +                   GMC  G V  A    R +  +   PDV+
Sbjct: 575 GFLPDIVTYSAAMN------------------GMCNTGEVDDALHLFRDISCKYYLPDVV 616

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N+L+       K +E +K+M EM+ +GL P+VVTY+++I   C+ G+ E A+  L   
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             +   P   +Y  LI  +C  GR D AI+    M   GC P+ + Y   +    K G  
Sbjct: 677 VYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRI 736

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + AL  FE++   G   +  S     + L S+G  ++   ++ E+L K    + +    L
Sbjct: 737 ETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKDTYGNNLKMVGL 796

Query: 411 IS----CLCRDGMVDEAVGLLVDMES 432
           I+     L +DG+    +   VD  S
Sbjct: 797 INEAVVELSKDGITSSDILKFVDKGS 822



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/448 (20%), Positives = 177/448 (39%), Gaps = 74/448 (16%)

Query: 123 ELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           + A +  D  R S G +P+  TYN ++ +L   G  + A     +++      +V  YT+
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTL 214

Query: 182 --LIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVGQAFQFVRSLESR 223
             L++     G+ D A  +   M                   K G V  A + + S+E+ 
Sbjct: 215 TSLLRCYCNAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEAL 274

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +    + ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      A
Sbjct: 275 GMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARA 334

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKD------------------------------- 312
           V + +  K  G+ PD      +I A+C++                               
Sbjct: 335 VKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLE 394

Query: 313 -----GRLDLAIEFLDYMISDG-------------------CLPDIVNYNTILAAFCKNG 348
                G ++ A + L  M+  G                     P+  ++N ++   CK  
Sbjct: 395 ELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVK 454

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D AL + + +  +GC   +  +N +   L +        G+ ++M   G+ P E TYN
Sbjct: 455 KLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYN 514

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SL   +CR      A+ LL +M++    P + +   ++   C + R+ E+++ L  M + 
Sbjct: 515 SLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           G  P+  TY   + G+   G   +A+ L
Sbjct: 575 GFLPDIVTYSAAMNGMCNTGEVDDALHL 602



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/475 (19%), Positives = 182/475 (38%), Gaps = 83/475 (17%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           ++ NA+ S   +  +  L     D + +R   +P  + +  ++  L + G+ ++A + FD
Sbjct: 105 YSLNAMASLLPRHQRAHLDRLAADAISARCLMTPGALGF--LLRCLGAAGLPDTAVRAFD 162

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQ----------- 212
                  C P   TY  L+ A    G+ D A   L EM   C  G V +           
Sbjct: 163 AARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYC 222

Query: 213 -----------------------------------------AFQFVRSLESRGCQPDVIS 231
                                                    A + + S+E+ G +    +
Sbjct: 223 NAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKT 282

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            ++L+      G+ ++   +  +M+S G   ++  YS+LI  LC+      AV + +  K
Sbjct: 283 LSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMK 342

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFL----DYMISDGCLPDIVNYNTILAAFCKN 347
             G+ PD      +I A+C++G   +   F+    +Y+ S   +P    YN +L      
Sbjct: 343 SSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVP---LYNVVLEELVHC 399

Query: 348 GNADQALEIFEKL--------SDVG-----------CPPNVSSYNTMFSALWSSGDKIRA 388
           G  + A ++   +        +DV              PN  S+N +   L        A
Sbjct: 400 GEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMA 459

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +  +M+S G +   + +N LI  LC    ++E  G+   M+     P+  +YN +  G
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            C+ +    ++++L  M   G  P       +++ + + G   EA++  + ++ +
Sbjct: 520 ICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQI 574


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 224/520 (43%), Gaps = 82/520 (15%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV---ME 96
           +  LI    + GK  ++   ++ M  +G  P V      I       K  +A R+   M+
Sbjct: 220 YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ 279

Query: 97  ILEKYG--EPDVFAYNALISGFCKANQIELANKVLDRLRSR------------------- 135
           I E+ G   P+V  Y  ++ GFCK   +E A  ++D ++                     
Sbjct: 280 IDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN 339

Query: 136 ----------------GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
                           G  PD+ +YNI++  LC  GM+  A  +   ++R+   P  +TY
Sbjct: 340 GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTY 399

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           + L+                   G C KG V +A   +  + S  C P+  + N+LL +L
Sbjct: 400 STLLH------------------GYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG----- 294
              G+  E E L+ +M  +G   + VT +I+I++LC +G+ + A++++      G     
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALG 501

Query: 295 ------------------LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
                              TPD  +Y  +IS  CK GRLD A +    M+S G  PD   
Sbjct: 502 NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAI 561

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y+T + +FC+ G    A ++ + +   GC   + +YN++   L S        G+I EM 
Sbjct: 562 YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR 621

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            KG+ PD  TYN +++CLC  G +++A  +L +M      P + S+ I+I  FCK     
Sbjct: 622 EKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFK 681

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            S EV        C   E  Y L+   +  GG  AEA EL
Sbjct: 682 ASHEVFEIALNV-CGHKEALYTLMFNELLVGGKVAEAKEL 720



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 225/485 (46%), Gaps = 55/485 (11%)

Query: 49  RAGKFDESLYFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-----Y 101
           ++G F++++   +S+ +N    +P + +   L+K   +E +    V ++  L K      
Sbjct: 87  KSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENR----VELVSWLYKDMVLAR 142

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+ + +N LI   C +  +E A ++ D++ +RG  P+  T+ I++   C  G+     
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGL 202

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           ++  Q+      P  + Y  LI +   EG+T  A KL+D+M                  +
Sbjct: 203 ELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISAL 262

Query: 205 CKKGMVGQAFQFVRSL---ESRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           C  G + +A +  R +   E  G   P+VI+Y ++L      G  EE + L+  M     
Sbjct: 263 CGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             N+ +Y+I +  L R+GK  +A  VL+     G+ PD YSY+ ++   CK+G L  A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            +  MI +G LPD V Y+T+L  +C  G   +A  +  ++    C PN  + N +  +LW
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLW 442

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA----------------- 423
             G    A  ++ +M  KG   D +T N +I+ LC +G +D+A                 
Sbjct: 443 KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502

Query: 424 -----VGLLVD-MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
                +GL+ D +   +  P +++Y+ II G CK  R++++ +    M  KG +P+   Y
Sbjct: 503 LGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562

Query: 478 VLLIE 482
              I 
Sbjct: 563 DTFIH 567



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 202/402 (50%), Gaps = 22/402 (5%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P ++ YN L+    + N++EL + +   +     SP+  T+N++IG LC  G +E A +
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +FD++    C+P   T+ IL++                  G C+ G+  +  + +  + +
Sbjct: 169 LFDKMPARGCEPNEFTFGILVR------------------GYCRAGLASKGLELLGQMRT 210

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  P+ + YN L+ +    GK  + EKL+ +M   GL P+V T++  IS+LC  GK  +
Sbjct: 211 MGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILE 270

Query: 283 AVDVLRAAK---EKGL-TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           A  + R  +   E GL  P+  +Y  ++  +CK+G L+ A   +D M  +    ++ +YN
Sbjct: 271 ASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYN 330

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
             L    +NG   +A  + +++  +G  P++ SYN +   L  +G    A  ++  M+  
Sbjct: 331 IWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN 390

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           GI PD +TY++L+   C  G V EA  LL +M S    P   + N+++    K  RI+E+
Sbjct: 391 GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEA 450

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +L  M EKG   +  T  ++I  +   G   +A+E+ N +
Sbjct: 451 ENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 45/457 (9%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EPD+++YN ++ G CK   +  A  ++  +   G  PD VTY+ ++   CS+G +  A  
Sbjct: 358 EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANN 417

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +  +++ +NC P   T  +L+ +   EG+  +A  LL +M                  +C
Sbjct: 418 LLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALC 477

Query: 206 KKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNMLLRTLLNM 242
             G + +A + V  + + G                       C PD+++Y+ ++  L   
Sbjct: 478 NNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKA 537

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+ ++ +K   EM+S+GL+P+   Y   I S CR+GK   A  VL+  +++G      +Y
Sbjct: 538 GRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTY 597

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
           + LI       ++      +D M   G  PD+  YN +L   C+ G  + A  + +++  
Sbjct: 598 NSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQ 657

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  PN+SS+  +  A   + D  +A   + E+        E  Y  + + L   G V E
Sbjct: 658 KGISPNISSFRILIKAFCKACD-FKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAE 716

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  L        F      Y  +I   CK  ++  + +VL  + +KG + +  +++ +I+
Sbjct: 717 AKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVID 776

Query: 483 GIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFP 519
           G G  G +  A ELA  ++ M + S     + N+ +P
Sbjct: 777 GFGKMGNKHVADELAERMMEMASES----NKENKAYP 809



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 158/304 (51%), Gaps = 6/304 (1%)

Query: 204 MCKKGMVGQAFQFVRSLESR--GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + K G   +A    +SL S     QP +  YN+LL++ +   + E    L  +M+   + 
Sbjct: 85  LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P   T+++LI  LC  G  EDA ++      +G  P+ +++  L+  YC+ G     +E 
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M + G LP+ V YNT++++FCK G    A ++ +K+ + G  P+V ++N+  SAL  
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 382 SGDKIRALGMISEML---SKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           SG  + A  +  +M      G+  P+ ITY  ++   C++GM++EA  L+  M+      
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            + SYNI +LG  +  ++ E+  VL  M   G +P+  +Y ++++G+   G  ++A  L 
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 498 NALV 501
             ++
Sbjct: 385 GLMI 388



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNC---KPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           ++  L   G    A   F  L R N    +P++  Y +L+++ + E + +    L  +M 
Sbjct: 81  LVTVLAKSGFFNKAISHFKSL-RSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           + +                    P+  ++N+L+  L + G  E+  +L  +M +RG EPN
Sbjct: 140 LAR------------------VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPN 181

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             T+ IL+   CR G     +++L   +  G+ P+   Y+ LIS++CK+G+   A + +D
Sbjct: 182 EFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVD 241

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS---DVGCP-PNVSSYNTMFSAL 379
            M  DG +P +  +N+ ++A C +G   +A  IF  +    ++G P PNV +Y  M    
Sbjct: 242 KMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGF 301

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G    A  ++  M       +  +YN  +  L R+G + EA  +L +M      P +
Sbjct: 302 CKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDI 361

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            SYNI++ G CK   ++++  ++  M   G  P+  TY  L+ G    G   EA  L + 
Sbjct: 362 YSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHE 421

Query: 500 LVS 502
           ++S
Sbjct: 422 MIS 424



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 76/384 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   ++ G+  E+   ++ M   G   D V C  +I       + +KA+ ++  +  +G
Sbjct: 437 LLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496

Query: 103 E------------------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
                                    PD+  Y+ +ISG CKA +++ A K    + S+G  
Sbjct: 497 SAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQ 556

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           PD   Y+  I S C  G I SAF+V   + +  C  T+ TY  LI               
Sbjct: 557 PDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI--------------- 601

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              +G+  K  + + +  +  +  +G  PDV +YN +L  L   G+  +   ++ EM+ +
Sbjct: 602 ---LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQK 658

Query: 259 GLEPNVVTYSILISSLCR----------------------------------DGKTEDAV 284
           G+ PN+ ++ ILI + C+                                   GK  +A 
Sbjct: 659 GISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAK 718

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++   A ++      + Y  LI   CKD +L+ A + L  +I  G   D  ++  ++  F
Sbjct: 719 ELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGF 778

Query: 345 CKNGNADQALEIFEKLSDVGCPPN 368
            K GN   A E+ E++ ++    N
Sbjct: 779 GKMGNKHVADELAERMMEMASESN 802



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 22/308 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+ D++      M++ G +PD  +    I  F +E K + A +V++ +EK G    + 
Sbjct: 536 KAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQ 595

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI G    NQI     ++D +R +G SPDV TYN M+  LC  G I  A  V D++
Sbjct: 596 TYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L+    P + ++ ILI+A        KA         C      + F+   ++    C  
Sbjct: 656 LQKGISPNISSFRILIKAFC------KA---------CDFKASHEVFEIALNV----CGH 696

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
               Y ++   LL  GK  E ++L    + R  +     Y  LI  LC+D K E A DVL
Sbjct: 697 KEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVL 756

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN--YNTILAAFC 345
               +KG   D  S+ P+I  + K G   +A E  + M+      +  N  Y  +     
Sbjct: 757 HRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNVKGHIL 816

Query: 346 KNGNADQA 353
           +N N D  
Sbjct: 817 RNKNKDAG 824



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%)

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P    YN L+    R+  V+    L  DM   R  P   ++N++I   C +  + ++ E
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +   M  +GC+PNE T+ +L+ G    G  ++ +EL   + +M
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM 211


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 215/463 (46%), Gaps = 19/463 (4%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           +L+ R  ++ K   +L F + MV  G  P V     +I    +E     A  + E ++  
Sbjct: 221 ELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAK 280

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD+  YN+LI G+ K   +  A  V + ++  G  PDV+TYN +I   C    I  A
Sbjct: 281 GLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQA 340

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           F+    + +   +P V+TY+ LI A                   CK GM+ +A +F   +
Sbjct: 341 FEYLHGMKQRGLQPNVVTYSTLIDA------------------FCKAGMLLEANKFFVDM 382

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G QP+  +Y  L+     +G   E  KL +EM   G+  N+VTY+ L+  LC DG+ 
Sbjct: 383 IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A ++  A  + G T +   Y  L   Y K   ++ A++ L+ M      PD++ Y T 
Sbjct: 443 REAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   C+    + ++ +  ++ D G   N   Y T+  A +  G    A+ ++ EM   GI
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +   +TY  LI  LC+ G+V +AV     M     +P ++ Y  +I G CK   + E+  
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +   M +KG  P++  Y  LI+G    G   EA+ L N +V +
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEI 665



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 222/477 (46%), Gaps = 18/477 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  + +    E M A G +PD+V    LI  + +      AV V E ++  G EPDV 
Sbjct: 263 REGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVI 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI+ FCK  +I  A + L  ++ RG  P+VVTY+ +I + C  GM+  A K F  +
Sbjct: 323 TYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDM 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +R   +P   TYT LI A    G  ++A KL  EM                 G+C+ G +
Sbjct: 383 IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +   +L   G   +   Y  L    +     E+   ++ EM  + L+P+++ Y   
Sbjct: 443 REAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR  + ED++ V+R   + GLT ++Y Y  LI AY K G+   A+  L  M   G 
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
              +V Y  ++   CK G   QA+  F+ ++  G  PN+  Y  +   L  +     A  
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + +EML KGI PD++ Y SLI    + G   EA+ L   M        + +Y  +I GF 
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
           +  ++  +  +L  M  KG  P++   + L+      G   EA+ L + +     IS
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLIS 739



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 190/454 (41%), Gaps = 60/454 (13%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    ++ L +       +E A +   ++      P V + N ++  L        A   
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           F  ++     P+V TY ++I     EG  + A  L +EM                 G  K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            GM+  A      ++  GC+PDVI+YN L+       +  +  + +  M  RGL+PNVVT
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 267 YSILISSLCRDGKTEDA----VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           YS LI + C+ G   +A    VD++R     GL P+ ++Y  LI A CK G L+ A +  
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRV----GLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G   +IV Y  +L   C++G   +A E+F  L   G   N   Y ++F     +
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD------------------------- 417
               +A+ ++ EM  K ++PD + Y + I  LCR                          
Sbjct: 475 KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIY 534

Query: 418 ----------GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
                     G   EAV LL +M+    + TV++Y ++I G CK   + +++     M  
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            G +PN   Y  LI+G+       EA  L N ++
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML 628



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 141/277 (50%)

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+P    ++ L   L+++G  EE  +   +M    + P V + + L+  L +  K   A+
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
              +     GL+P  ++Y+ +I    ++G L+ A    + M + G  PDIV YN+++  +
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K G    A+ +FE++ D GC P+V +YN++ +         +A   +  M  +G++P+ 
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TY++LI   C+ GM+ EA    VDM     +P   +Y  +I   CK   +NE+ ++ + 
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           M + G   N  TY  L++G+   G   EA EL  AL+
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 34/363 (9%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC-TKLIKKFFQERKSNKA 91
           + + +  +  L     +A   ++++  +E M     KPD+++  TK+     Q    +  
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             + E+++     + + Y  LI  + K  +   A  +L  ++  G    VVTY ++I  L
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G+++ A + FD + R+  +P ++ YT LI                   G+CK   + 
Sbjct: 577 CKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID------------------GLCKNDCLE 618

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      +  +G  PD + Y  L+   +  G   E   L   M+  G+E ++  Y+ LI
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
               R G+ + A  +L     KG+ PD      L+  Y + G ++ A+   D M   G +
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738

Query: 332 --------PDIVNYNTILAAFCKNGN-------ADQALEIFEKLSDVGCPPNVSSYNTMF 376
                   P  +   T L   C + +       A+  L   E+ S  G P +   +  +F
Sbjct: 739 SGTIDITVPSCLTAVTKLHKLCASQSGTDFHRTANLYLADVEEFSHSGMPFSPLGHARLF 798

Query: 377 SAL 379
           + L
Sbjct: 799 TCL 801


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 221/454 (48%), Gaps = 29/454 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD + +N+LI G+C+ NQ+++A  + D++  RGF+ DVV+Y  +I  LC  G I+ A ++
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL---DEMGM--------------CK 206
           F ++     +P +  Y  L++      + ++ + +L    E+G               C+
Sbjct: 68  FGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +    +A + ++ +  +G  P V++   ++      G+  +  +++  M  RG +PNV T
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ L+   C +GK   A+ +L   +  G+ PDA +Y+ LI   C DG ++ A   L  M 
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
            DG + D   YN ++ A CK+G  DQA  +F+ L   G  PN  ++N++ + L  SG   
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A   + +M+S G  PD  TY+S I  LC+     E +  + +M     +P+ ++Y I+I
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA----MELANALVS 502
               K R           M   GC P+  TY   +      G   EA    ME++   V+
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 423

Query: 503 MHAISRDTF----KRLNRTFPLLDVYKEISHLAT 532
           +  ++ +T       + +T   + + K+++ +A+
Sbjct: 424 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 457



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 239/542 (44%), Gaps = 71/542 (13%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K  E+   ++ M   G  P VV CT +I  + +E + + A+RV+E+++  G +P+V+
Sbjct: 123 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNAL+ GFC   ++  A  +L+++R+ G +PD VTYN++I   C  G IESAF++   +
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             D       TY  LI A   +G+TD+A  L D +                 G+CK G  
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG---------------------- 248
             A++F+  + S GC PD  +Y+  +  L  M   +EG                      
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 362

Query: 249 -EKLMTE------------MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
             KL+ E            M+S G  P+VVTY+  + + C +G+  +A +VL    + G+
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL-------------- 341
           T D  +Y+ L+  +   G+ D A+  L  M S   +P+   Y  +L              
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 482

Query: 342 ---AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
              A   K         +F+ +      PN  +Y+++       G    A  ++S M   
Sbjct: 483 LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED 542

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I  +E  Y +L++C C+     +A  L+  M    F P ++SY  ++ G     + +++
Sbjct: 543 SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA 602

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA-ISRDTFKRLNRT 517
            E+      K   P+E  + ++I+G+   G    + E+   L  M+   S  T+  L   
Sbjct: 603 KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 662

Query: 518 FP 519
            P
Sbjct: 663 LP 664



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 218/506 (43%), Gaps = 39/506 (7%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F      +  LI+    AG+ DE++     M     +PD+ M   L+K      +  
Sbjct: 38  LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGE 93

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           + + ++  +++ G  P   AY A++   C+  + + A ++L  +  +G +P VVT   +I
Sbjct: 94  EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 153

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
            + C  G +  A +V + +    CKP V TY  L+Q    EG+  KAM LL++M      
Sbjct: 154 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 213

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                      G C  G +  AF+ +R +E  G   D  +YN L+  L   G+ ++   L
Sbjct: 214 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 273

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              + +RG++PN VT++ LI+ LC+ GK + A   L      G TPD Y+Y   I   CK
Sbjct: 274 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
                  + F+  M+     P  VNY  ++    K  N       + ++   GC P+V +
Sbjct: 334 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y T   A    G    A  ++ EM   G+  D + YN+L+      G  D AV +L  M 
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK-----------------PNE 474
           S    P   +Y I++    + R + + + +  A   K  +                 PN 
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            TY  ++EG    G   EA  L + +
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLM 539



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 22/349 (6%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ PD  T+N +I   C    ++ A  +FD++        V++Y  LI+     G+ D+A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++L  EM                       QPD+  Y  L++ L N  + EEG  ++  M
Sbjct: 65  VELFGEMD----------------------QPDMHMYAALVKGLCNAERGEEGLLMLRRM 102

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G  P+   Y+ ++   CR+ K ++A ++L+   EKGL P   +   +I+AYCK+GR+
Sbjct: 103 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 162

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+  L+ M   GC P++  YN ++  FC  G   +A+ +  K+   G  P+  +YN +
Sbjct: 163 SDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G    A  ++  M   G+  D+ TYN+LI+ LC+DG  D+A  L   +E+   
Sbjct: 223 IRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI 282

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +P  +++N +I G CK+ + + + + L  M   GC P+  TY   IE +
Sbjct: 283 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 331



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 4/229 (1%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+  G  P+  T++ LI   CR  + + A D+      +G   D  SY  LI   C+ GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A+E    M      PD+  Y  ++   C     ++ L +  ++ ++G  P+  +Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +            A  M+ EM  KG+ P  +T  ++I+  C++G + +A+ +L  M+   
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +P V +YN ++ GFC   ++++++ +L  M   G  P+  TY LLI G
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 225



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+  G  PD  T+NSLI   CR   VD A  L   M    F   V+SY  +I G C+  R
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I+E++E+   M +    P+   Y  L++G+
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGL 86



 Score = 41.6 bits (96), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M  + +RP   ++N +I+G+C+T +++ + ++   M  +G   +  +Y  LIEG+   G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 490 RAEAMEL 496
             EA+EL
Sbjct: 61  IDEAVEL 67


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 223/463 (48%), Gaps = 21/463 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            + R  +AG+ D S  F   MV  G  P V     +I    +E     A  + E ++K G
Sbjct: 103 FLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMG 162

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS-RGMIESA 160
             PD+  YN LI G+ K   ++ +  + + ++  G  PDV+TYN +I S C  +GM+  A
Sbjct: 163 LTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLR-A 221

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           F+ F ++   + KP VI+Y+ LI A                  +CK+GM+  A +F   +
Sbjct: 222 FEFFREMKDKDLKPNVISYSTLIDA------------------LCKEGMMQMAIKFFVDM 263

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P+  +Y+ L+      G   E   L  EM+   ++ N+VTY+ L+  LC +G  
Sbjct: 264 TRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMM 323

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A ++ RA  + G+TP+  +Y  LI  + K   +D A+E  + M      PDI+ + TI
Sbjct: 324 NEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTI 383

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   C     ++   I  ++ + G   N   Y T+  A + +G++  A+ ++ EM   G 
Sbjct: 384 VWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           E   +T+ +LI  LC+ G+V EA+     M     +P V  Y  +I G CK   I ++ +
Sbjct: 444 EVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK 503

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +   M +K   P++  Y  +I+G    G   EA+ + N ++ M
Sbjct: 504 LFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM 546



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 216/461 (46%), Gaps = 18/461 (3%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
             E M   G  PD+V    LI  + +    +++V + E ++  G EPDV  YNALI+ FC
Sbjct: 154 LFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFC 213

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K   +  A +    ++ +   P+V++Y+ +I +LC  GM++ A K F  + R    P   
Sbjct: 214 KFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY+ LI A    G   +A  L DEM                 G+C++GM+ +A +  R++
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P++ +Y  L+   + +   ++  +L  EM  + ++P+++ +  ++  LC + K 
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+   ++   KE G+  +   Y  L+ AY K G    AI  L+ M   G    +V +  +
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CK G   +A+  F ++ D    PNV+ Y  +   L  +     A  +  EM  K +
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD+I Y ++I    + G   EA+ +   M        + +Y  ++ G  +  ++ ++ +
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            LA M  KG  P+ET    L+      G   EA+EL N LV
Sbjct: 574 FLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELV 614



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 153/311 (49%), Gaps = 5/311 (1%)

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
           G  D    +L E+GM +    GQ F  +R  + R   P   S N  L  L   G+ +   
Sbjct: 63  GVFDALFSVLVELGMLEAA--GQCF--LRMTKFR-VLPKARSCNAFLHRLSKAGEGDLSR 117

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
               +M+  G+ P V TY+I+I  +C++G    A  +    K+ GLTPD  +Y+ LI  Y
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            K G LD ++   + M   GC PD++ YN ++ +FCK     +A E F ++ D    PNV
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            SY+T+  AL   G    A+    +M   G+ P+E TY+SLI   C+ G + EA  L  +
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M        +++Y  ++ G C+   +NE+ E+  AM + G  PN   Y  LI G      
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 490 RAEAMELANAL 500
             +AMEL N +
Sbjct: 358 MDKAMELFNEM 368



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 152/332 (45%)

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R   + T  +Y IL+           A  +L E+ +    + G     +       C P 
Sbjct: 2   RVGFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPG 61

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              ++ L   L+ +G  E   +    M    + P   + +  +  L + G+ + + D  R
Sbjct: 62  FGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFR 121

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G+ P  ++Y+ +I   CK+G +  A    + M   G  PDIV YNT++  + K G
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+++ +FE++  +GC P+V +YN + ++       +RA     EM  K ++P+ I+Y+
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI  LC++GM+  A+   VDM      P   +Y+ +I   CK   + E+  +   M ++
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               N  TY  L++G+   G   EA EL  A+
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 158/346 (45%), Gaps = 18/346 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI  + +AG   E+    + M+      ++V  T L+    +E   N+A  +  
Sbjct: 272 EFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFR 331

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + K G  P++ AY ALI G  K   ++ A ++ + +R +   PD++ +  ++  LCS  
Sbjct: 332 AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +E    +  ++         + YT L+ A    G   +A+ LL+EM             
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK+G+V +A  +   +     QP+V  Y  L+  L       + +KL  EM  +
Sbjct: 452 ALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDK 511

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            + P+ + Y+ +I    + G  ++A+++     E G+  D Y+Y  L+    + G++  A
Sbjct: 512 NMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQA 571

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
            +FL  MI  G +PD      +L    + GN D+A+E+  +L + G
Sbjct: 572 RKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 110/243 (45%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P    +  L S L   G  E A        +  + P A S +  +    K G  DL+ +F
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+  G  P +  YN ++   CK G+   A  +FE++  +G  P++ +YNT+      
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    ++ +  EM   G EPD ITYN+LI+  C+   +  A     +M+    +P VIS
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y+ +I   CK   +  +I+    M   G  PNE TY  LI+     G   EA  LA+ ++
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 502 SMH 504
             H
Sbjct: 300 QEH 302



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 33/335 (9%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           ++ E  R    A   PN            +  LI    +    D+++     M     KP
Sbjct: 325 EAEELFRAMGKAGVTPNLQ---------AYTALIHGHIKVRSMDKAMELFNEMREKDIKP 375

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           D+++   ++     E K  +   +M  +++ G   +   Y  L+  + KA     A  +L
Sbjct: 376 DILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLL 435

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           + +R  G    VVT+  +I  LC RG+++ A   F ++   + +P V  YT LI      
Sbjct: 436 EEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALID----- 490

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+CK   +G A +    ++ +   PD I+Y  ++   L  G ++E  
Sbjct: 491 -------------GLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            +  +M+  G+E ++  Y+ L+  L + G+ + A   L     KG+ PD      L+  +
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKH 597

Query: 310 CKDGRLDLAIEFLDYMISDGCL-----PDIVNYNT 339
            + G +D AIE  + ++  G +     P + N  T
Sbjct: 598 YELGNIDEAIELQNELVEKGLIHGNSNPAVPNIQT 632


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 221/447 (49%), Gaps = 20/447 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  L+    R   +  ++  ++ M ++ G + D +    +I    + +       V+  +
Sbjct: 79  FTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTM 138

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP V     LI+G C    +  A  + D +    +  DV TY ++I  LC  G  
Sbjct: 139 FKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDT 198

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A     ++   N KP V+ Y+ ++                   G+CK G+V +A    
Sbjct: 199 LAAVGWLRKMEERNWKPNVVVYSTIMD------------------GLCKDGLVSEALNLC 240

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +  +G +P++++Y  L++ L N G+W+E   L+ EM+  G+ P++   +IL+ + C++
Sbjct: 241 SEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKE 300

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK   A  V+      G  PD ++Y+ LI  YC   +++ A+     M+S G LPDIV +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVF 360

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            +++  +CK+ N ++A+ + E++S +G  P+V+++ T+      +G  + A  +   M  
Sbjct: 361 TSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHK 420

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  P+  T   ++  LC++ ++ EAV L   ME +     ++ Y+I++ G C   ++N 
Sbjct: 421 YGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNA 480

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGI 484
           + E+ +++  KG + N   Y ++I+G+
Sbjct: 481 AWELFSSLPGKGLQINVYIYTIMIKGL 507



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 203/440 (46%), Gaps = 18/440 (4%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCK 118
           + +M   G +P V+  T LI     +    +AV + + +EK   P DV+ Y  LI+G CK
Sbjct: 135 LGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCK 194

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
                 A   L ++  R + P+VV Y+ ++  LC  G++  A  +  ++     +P ++T
Sbjct: 195 TGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVT 254

Query: 179 YTILIQATMLEGQTDKAMKLLDEM---GM--------------CKKGMVGQAFQFVRSLE 221
           Y  LIQ     G+  +A  LLDEM   GM              CK+G V QA   +  + 
Sbjct: 255 YACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMI 314

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  PDV +YN L+       K  E  ++   M+SRG  P++V ++ LI   C+D    
Sbjct: 315 LTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNIN 374

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+ +L    + G  PD  ++  LI  +C+ GR   A E    M   G +P++     IL
Sbjct: 375 KAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVIL 434

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK     +A+ + + +       N+  Y+ +   + S+G    A  + S +  KG++
Sbjct: 435 DGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQ 494

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +   Y  +I  LC+ G +D+A  LL++ME     P   +YN+ + G    + I  SI+ 
Sbjct: 495 INVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKY 554

Query: 462 LAAMFEKGCKPNETTYVLLI 481
           L  M +KG   +  T   +I
Sbjct: 555 LTIMRDKGFSVDAATTEFII 574



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 172/407 (42%), Gaps = 56/407 (13%)

Query: 150 SLCSRGM---IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           +LC  G    I+ A  +F  + R    P+V  +T+L+ A +       A+ L+  M    
Sbjct: 47  NLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSL 106

Query: 203 -------------------------------------------------GMCKKGMVGQA 213
                                                            G+C +G V QA
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                 +E      DV +Y +L+  L   G        + +M  R  +PNVV YS ++  
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC+DG   +A+++      KG+ P+  +Y  LI   C  GR   A   LD M+  G  PD
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +   N ++ AFCK G   QA  +   +   G  P+V +YN++            A+ +  
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M+S+G  PD + + SLI   C+D  +++A+ LL +M    F P V ++  +I GFC+  
Sbjct: 347 LMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAG 406

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           R   + E+   M + G  PN  T  ++++G+      +EA+ LA A+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAM 453



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 19/367 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+L     M   G +P++V    LI+      +  +A  +++ + K G  PD+ 
Sbjct: 229 KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQ 288

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             N L+  FCK  ++  A  V+  +   G  PDV TYN +I   C +  +  A +VF  +
Sbjct: 289 MLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +     P ++ +T LI     +   +KAM LL+EM   K G V                P
Sbjct: 349 VSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMS--KMGFV----------------P 390

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV ++  L+      G+    ++L   M   G  PN+ T ++++  LC++    +AV + 
Sbjct: 391 DVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLA 450

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +A ++  L  +   Y  L+   C  G+L+ A E    +   G   ++  Y  ++   CK 
Sbjct: 451 KAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQ 510

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G+ D+A ++   + + GC PN  +YN     L +  +  R++  ++ M  KG   D  T 
Sbjct: 511 GSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATT 570

Query: 408 NSLISCL 414
             +I+ L
Sbjct: 571 EFIINYL 577



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 6/240 (2%)

Query: 269 ILISSLCRDGK---TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           I + +LC  GK    ++A+D+ +        P    +  L+ A  +      AI  + +M
Sbjct: 43  ISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHM 102

Query: 326 ISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            S  G   D +  N ++   C+         +   +  +G  P V +  T+ + L   G+
Sbjct: 103 FSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGN 162

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A+G+   M       D  TY  LI+ LC+ G    AVG L  ME   ++P V+ Y+ 
Sbjct: 163 VAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYST 222

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANALVSM 503
           I+ G CK   ++E++ + + M  KG +PN  TY  LI+G+  +G W+ EA  L + ++ M
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWK-EAGSLLDEMMKM 281


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 220/461 (47%), Gaps = 22/461 (4%)

Query: 46  RSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           +S      D ++     M+     P  V   KL+    + +  +  + +   ++ +G  P
Sbjct: 35  KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94

Query: 105 DVFAYNALISGFCKAN--QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +++  + LI+ FC  N  +I  A  + D++   GF PDVVTY  +I  LC  G   +A +
Sbjct: 95  NIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 154

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +   +++ NC+P V  Y  +I +                  +CK   V +AF     + +
Sbjct: 155 LLGSMVQKNCQPNVFAYNTIIDS------------------LCKDRQVTEAFNLFSEMVT 196

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G  PD+ +YN L+  L N+ +W+    L+ EM+   + P+VV+++ ++ +LC++GK  +
Sbjct: 197 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 256

Query: 283 AVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           A DV+ +  +  G  P+  SY+ LI+ YCK  R+D A+     M     +PD V Y+T++
Sbjct: 257 AHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 316

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C       A+ +F ++      PN+ +Y  +   L  +     A+ ++  +    ++
Sbjct: 317 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 376

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD    N  I  +CR G ++ A  L  ++ S   +P V +Y+I+I G C+   ++E+ ++
Sbjct: 377 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 436

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              M E GC  N   Y  +  G       + A++L   +V+
Sbjct: 437 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 477



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 213/432 (49%), Gaps = 30/432 (6%)

Query: 18  VSSSAETRPNTHLLSFDVKETQF--------MKLIKRSF---RAGKFDESLYFIESMVAN 66
           ++S A+ + ++ LLS   +   F        + ++  SF     GK  E+L+  + M+  
Sbjct: 68  LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGE 127

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +PDVV    LI    +   ++ A+R++  +++K  +P+VFAYN +I   CK  Q+  A
Sbjct: 128 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 187

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             +   + ++G SPD+ TYN +I +LC+    +    + ++++     P V+++  ++ A
Sbjct: 188 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 247

Query: 186 TMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESRGCQP 227
              EG+  +A  ++D+M                  G CK   + +A      +  +   P
Sbjct: 248 LCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 307

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D ++Y+ L+  L ++ + ++   L  EM++    PN+VTY IL+  LC++    +A+ +L
Sbjct: 308 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 367

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +A +   L PD    +  I   C+ G L+ A +    + S G  PD+  Y+ ++   C+ 
Sbjct: 368 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 427

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  D+A ++F ++ + GC  N   YNT+      + +  RA+ ++ EM+++G   D  T 
Sbjct: 428 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTM 487

Query: 408 NSLISCLCRDGM 419
              +  L  DG+
Sbjct: 488 TLFVKMLSDDGL 499



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 3/283 (1%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR--DGKTEDAV 284
           P  + +N LL ++  M        L  +M S G+ PN+ T  ILI+S C    GK  +A+
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +      +G  PD  +Y  LI+  CK G    AI  L  M+   C P++  YNTI+ + 
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+    +A  +F ++   G  P++ +YN++  AL +  +      +++EM+   I PD 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           +++N+++  LC++G V EA  ++  M +     P VISYN +I G+CK +RI++++ +  
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            M  +   P+  TY  LI G+ +     +A+ L + +V+   I
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 211/461 (45%), Gaps = 19/461 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI      GK DE+L     M  +GC PDV   T L+  F +  K  +A++  E
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + + G EP+V+ Y  LI  FCK  +++   ++L  +  +G    VV +N +I   C RG
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           M+E A  V D +  +   P   TY  LI                   G C+K  + +A  
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSRTYNELI------------------CGFCRKKSMDRAMA 421

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +      P++++YN L+  L      +   +L   MI  G  P+  T+   I  LC
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + GK E A  V  + KEK    + + Y  LI  YCK  +   A      M+ +GC P+ +
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +N +L    K G  + A+ + + +      P V +Y  +   +    D  RA   + +M
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S G +P+ +TY + I   CR G + EA  ++V ++          Y++++  +    ++
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + +  VL  MF+ GC+P+  TY +L++ + +  +  E M L
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL 702



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 238/532 (44%), Gaps = 63/532 (11%)

Query: 11  KSNERVRVS------SSAETRPNTHLLS---FDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           ++ E VR S      SS E R   +LL+   F +  T + +L     R G  DE     +
Sbjct: 120 RAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFK 179

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKAN 120
            M+ +G +P+++    ++    +      A      L K+G   D F Y +LI G+CK +
Sbjct: 180 DMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIH 239

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           ++  A KV + +   G   + V+Y  +I   C  G I+ A ++F Q+  D C P V TYT
Sbjct: 240 ELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYT 299

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           +L+ A                   C+ G   +A +F   +   G +P+V +Y +L+    
Sbjct: 300 VLVAA------------------FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFC 341

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
            +GK +EG ++++ M+ +GL  +VV ++ LI   C+ G  EDA+ VL + K   + P++ 
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSR 401

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN------------- 347
           +Y+ LI  +C+   +D A+  L+ M  +   P++V YNT++   CK              
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461

Query: 348 ----------------------GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
                                 G  +QA ++FE L +     N   Y  +      +   
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKF 521

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +   ML +G  P+ IT+N L+  L ++G V++A+ L+  M     +PTV +Y I+
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           I    +    + +   L  M   GC+PN  TY   I+     G   EA E+ 
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMV 633



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 230/505 (45%), Gaps = 44/505 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    + G  ++++  ++SM  N   P+     +LI  F +++  ++A+ ++ ++ 
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY 427

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    P++  YN LI G CKA  ++ A ++   +   GF PD  T+   I  LC  G +E
Sbjct: 428 ENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVE 487

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VF+ L   + +     YT LI       +   A  L   M                
Sbjct: 488 QAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL 547

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K+G V  A   V  +     +P V +Y +L+  +L    ++     + +MIS G +
Sbjct: 548 DGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQ 607

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PNVVTY+  I + CR G+  +A +++   KE+G+  D++ YD L++AY   G+LD A   
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 322 LDYMISDGCLPDIVNYNTILAAF---------------CKNGNADQA-------LEI--- 356
           L  M   GC P    Y+ +L                    N + D A        EI   
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 357 -FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
            FEK+ + GC PNV++Y+ +   L        A  + + M   GI P E  +NSL+S  C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + GM +EA+ LL  M        + SY +++ G  +     ++ E+  ++   G   +E 
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 476 TYVLLIEGIGYGGWRAEAMELANAL 500
            + +L++G+   G+  E  +L + +
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIM 872



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 184/385 (47%), Gaps = 7/385 (1%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             GF   V +Y  ++  L   G + +A  V + +++ +C  +     +L   T  E    
Sbjct: 96  QHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIK-SCVSSHEARFVLNLLTHHEFSLS 154

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                   M + + G++ +     + + + G +P++IS+N ++     +G     +    
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
            ++  G   +  TY+ LI   C+  +  DA  V     ++G   +  SY  LI  +C+ G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           ++D A+E    M  DGC PD+  Y  ++AAFC+ G   +AL+ FE++ + G  PNV +Y 
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +       G     + M+S ML KG+    + +N+LI   C+ GM+++A+ +L  M+  
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLN 394

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +  P   +YN +I GFC+ + ++ ++ +L  M+E    PN  TY  LI G+       +A
Sbjct: 395 KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL------CKA 448

Query: 494 MELANALVSMHAISRDTFKRLNRTF 518
             + +A    H + +D F    RTF
Sbjct: 449 RVVDSAWRLHHLMIKDGFVPDQRTF 473



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 196/438 (44%), Gaps = 44/438 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI    +A   D +      M+ +G  PD       I    +  K  +A +V E L EK+
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            E + F Y ALI G+CKA +   A+ +  R+   G  P+ +T+N+++  L   G +E A 
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAM 560

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + D + + + KPTV TYTILI+  + E   D+A   LD+M                   
Sbjct: 561 SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C++G + +A + V  ++  G   D   Y++L+     +G+ +    ++  M   G EP+ 
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR 680

Query: 265 VTYSILISSLCRDGKTE--------------DAVDVLRAAK------------EKGLTPD 298
            TYSIL+  L  +   +              D  ++ + A             E+G  P+
Sbjct: 681 QTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPN 740

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  LI   CK   L LA    ++M   G  P    +N++L++ CK G  ++AL + +
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
            + +     ++ SY  +   L+  G++ +A  +   +LS G   DE+ +  L+  L R G
Sbjct: 801 SMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKG 860

Query: 419 MVDEAVGLLVDMESTRFR 436
            VDE   L   ME T  R
Sbjct: 861 YVDECSQLRDIMEKTGCR 878



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 175/381 (45%), Gaps = 18/381 (4%)

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A  VL+ L    FS  V +YN +   L   G+I+    +F  +L D  +P +I++  ++ 
Sbjct: 139 ARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVN 198

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           A                   CK G V  A  +   L   G   D  +Y  L+     + +
Sbjct: 199 AH------------------CKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
             +  K+   M   G   N V+Y+ LI   C  GK ++A+++    KE G  PD  +Y  
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L++A+C+ G+   A++F + M+ +G  P++  Y  ++  FCK G  D+ +E+   + + G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              +V  +N +       G    A+ ++  M    + P+  TYN LI   CR   +D A+
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAM 420

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL  M   +  P +++YN +I G CK R ++ +  +   M + G  P++ T+   I+ +
Sbjct: 421 ALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCL 480

Query: 485 GYGGWRAEAMELANALVSMHA 505
              G   +A ++  +L   HA
Sbjct: 481 CKMGKVEQAHQVFESLKEKHA 501



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++E+   P+V  Y+ LI G CK   + LA ++ + ++  G SP    +N ++ S C  G
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLG 790

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL----------DEM--- 202
           M E A ++ D ++  N    + +Y +L+     +G  +KA ++           DE+   
Sbjct: 791 MHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWK 850

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
               G+ +KG V +  Q    +E  GC+    ++ ML + L
Sbjct: 851 VLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 36/173 (20%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           ++   F+      E MV  GC P+V   +KLIK   +    + A R+   +++ G  P  
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776

Query: 107 FAYNALISGFCKANQIELANKVLDR----------------------------------- 131
             +N+L+S  CK    E A ++LD                                    
Sbjct: 777 NIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRS 836

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           L S G++ D V + +++  L  +G ++   ++ D + +  C+    T+T+L Q
Sbjct: 837 LLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 226/464 (48%), Gaps = 17/464 (3%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AGKFDE+   +E   A G  P V+    ++    +  K ++A++V E ++K   P++  Y
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTY 380

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C+A +++ A ++ D ++  G  P+V T NIM+  LC    ++ A  +F+++  
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  IT+  LI      G+ D A K+ ++M                      G    
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
             +  + + ++ C PD+   N  +  +   G+ E+G  +  E+ +R   P+  +YSILI 
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            L + G   +  ++  + KE+G   D  +Y+ +I  +CK G+++ A + L+ M + G  P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y +++    K    D+A  +FE+        NV  Y+++       G    A  ++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E++ KG+ P+  T+NSL+  L +   ++EA+     M+  +  P  ++Y I+I G CK 
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           R+ N++      M ++G KP+  +Y  +I G+   G  AEA  L
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 225/466 (48%), Gaps = 19/466 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +A K  E    ++ M     +P     T LI  F     S+  + + + +++ G EP V 
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  LI GF K  +++ A  +LD ++S     D+V YN+ I S    G ++ A+K F ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMV 210
             +  KP  +TYT +I       + D+A+++ +                  MG    G  
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A+  +    ++G  P VI+YN +L  L  MGK +E  K+  EM  +   PN+ TY+IL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNIL 383

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR GK + A ++  + ++ GL P+  + + ++   CK  +LD A    + M    C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD + + +++    K G  D A +++EK+ D  C  N   Y ++    ++ G K     
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  +M+++   PD    N+ + C+ + G  ++   +  ++++ RF P   SY+I+I G  
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K    NE+ E+  +M E+GC  +   Y ++I+G    G   +A +L
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 20/446 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + GK D +  F   + ANG KPD V  T +I    +  + ++AV + E LEK    P  +
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN +I G+  A + + A  +L+R R++G  P V+ YN ++  L   G ++ A KVF+++
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            +D   P + TY ILI                    +C+ G +  AF+   S++  G  P
Sbjct: 370 KKD-AAPNLSTYNILIDM------------------LCRAGKLDTAFELRDSMQKAGLFP 410

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V + N+++  L    K +E   +  EM  +   P+ +T+  LI  L + G+ +DA  V 
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               +     ++  Y  LI  +   GR +   +    MI+  C PD+   NT +    K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++   +FE++      P+  SY+ +   L  +G       +   M  +G   D   Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I   C+ G V++A  LL +M++  F PTV++Y  +I G  K  R++E+  +      
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
           K  + N   Y  LI+G G  G   EA
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEA 676



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 190/401 (47%), Gaps = 19/401 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V     ++ G  KAN++     V+  +R   F P    Y  +IG+  +    +    +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F Q+     +PTV  +T LI+    EG+ D A+ LLDEM                  +S 
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM------------------KSS 232

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
               D++ YN+ + +   +GK +   K   E+ + GL+P+ VTY+ +I  LC+  + ++A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V++    ++    P  Y+Y+ +I  Y   G+ D A   L+   + G +P ++ YN IL  
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             K G  D+AL++FE++      PN+S+YN +   L  +G    A  +   M   G+ P+
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             T N ++  LC+   +DEA  +  +M+     P  I++  +I G  K  R++++ +V  
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
            M +  C+ N   Y  LI+     G + +  ++   +++ +
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 188/406 (46%), Gaps = 18/406 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVM 95
           E  F  LI    + G+ D++    E M+ + C+ + ++ T LIK FF   RK +      
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +++ +   PD+   N  +    KA + E    + + +++R F PD  +Y+I+I  L   G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
                +++F  +    C      Y I+I      G+ +KA +LL+EM             
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+ K   + +A+      +S+  + +V+ Y+ L+     +G+ +E   ++ E++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL PN+ T++ L+ +L +  +  +A+   ++ KE   TP+  +Y  LI+  CK  + + A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
             F   M   G  P  ++Y T+++   K GN  +A  +F++    G  P+ + YN M   
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           L +    + A  +  E   +G+     T   L+  L ++  +++A 
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 1/288 (0%)

Query: 210 VGQAFQFVRSLESRGCQPDVI-SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           V +A ++ R  E R   P    SYN LL  +     ++  ++++ EM   G  P+V T  
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++    +  K  +  DV++  ++    P   +Y  LI A+      D+ +     M   
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P +  + T++  F K G  D AL + +++       ++  YN    +    G    A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                E+ + G++PDE+TY S+I  LC+   +DEAV +   +E  R  P   +YN +I+G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +    + +E+  +L     KG  P+   Y  ++  +   G   EA+++
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 1/286 (0%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           Q +  +   G  P V +   ++   +   K  EG  ++  M      P    Y+ LI + 
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
                ++  + + +  +E G  P  + +  LI  + K+GR+D A+  LD M S     DI
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V YN  + +F K G  D A + F ++   G  P+  +Y +M   L  +     A+ M   
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +      P    YN++I      G  DEA  LL    +    P+VI+YN I+    K  +
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++E+++V   M +K   PN +TY +LI+ +   G    A EL +++
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 18/264 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           + GK +++   +E M   G +P VV    +I    +  + ++A  + E  + K  E +V 
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y++LI GF K  +I+ A  +L+ L  +G +P++ T+N ++ +L     I  A   F  +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
               C P  +TY ILI       + +KA     EM                 G+ K G +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A       ++ G  PD   YN ++  L N  +  +   L  E   RGL  +  T  +L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKG 294
           + +L ++   E A  V    +E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 229/474 (48%), Gaps = 46/474 (9%)

Query: 51  GKFDESLYFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           GK  ++   ++ M    C+ P+ V    ++  + ++ +   A+R+++ +EK G E D++ 
Sbjct: 244 GKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYT 301

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I   CK  +   A  +L R+R    +PD  +YN +I      G I  A  +F+Q+L
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--CKKGMVGQAFQFVRSLESRGCQ 226
           R + KP+V TYT LI      G+TD+A ++L EM +   +   V +A Q ++ + + G  
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGID 421

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDVI+Y+     L+N G   E E+    M    +  +V +++ +I S C+ G   +A  V
Sbjct: 422 PDVITYS----ALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 477

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  PD  +Y  L+   C+ G L  A EF+ Y++   C  D    NT+L   CK
Sbjct: 478 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 537

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +G  D+AL++ EK+      P+  +Y  +       G  + AL ++  ML KG+ PD I 
Sbjct: 538 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 597

Query: 407 YNSLISCL-----------------CRDGM-------------------VDEAVGLLVDM 430
           Y  L++ L                 C++G+                   ++E   L+ +M
Sbjct: 598 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 657

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                 P+  SYNI++ G+ K  +++ ++ +   M ++G KP+  TY LLI G+
Sbjct: 658 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 711



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 218/455 (47%), Gaps = 20/455 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +SFDV    F  +I    + G   E+    ++MV +G  PD+     L++   Q     +
Sbjct: 451 ISFDV--ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 508

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A   M  +LEK    D    N L+ G CK   ++ A  + +++ +R   PD  TY I++ 
Sbjct: 509 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 568

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             C RG +  A  +   +L     P  I YT L+   + EGQ   A  +  E+ +CK+G+
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI-ICKEGL 627

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                             D I+YN ++   L  G+  E E+LM  M    + P+  +Y+I
Sbjct: 628 YA----------------DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 671

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+    + G+    + + R   ++G+ PD  +Y  LI   C+ G +++A++FL+ M+ +G
Sbjct: 672 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEG 731

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PD + ++ ++ AF +      AL++F  +  +   P+  +Y  M + L       ++ 
Sbjct: 732 VFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSY 791

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ +M+  G++P    Y +LI+  CR G +D A  L  DM++    P+ ++ + I+ G 
Sbjct: 792 EILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 851

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           CK  ++ E+I V +++   G  P   T+  L+ G+
Sbjct: 852 CKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGL 886



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 212/446 (47%), Gaps = 45/446 (10%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+  + +E K   A   +  +++ G +  +F+ N +++     N+ E     L     R 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKA 195
           F  DV T NI++ SLC++G +  A  +  ++   NC+ P  +TY  ++   + +G+   A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +++LD+M                  +CK     +A+  ++ +      PD  SYN L+  
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL----------- 287
               GK      +  +M+ + L+P+V TY+ LI   CR+G+T++A  VL           
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 288 RAAKEK---------GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +K K         G+ PD  +Y  LI+    +G +  A +F  YM       D+ ++N
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFN 459

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            I+ ++C+ GN  +A  +++ +   G PP++ +Y ++   L   G  ++A   +  +L K
Sbjct: 460 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 519

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
               DE T N+L+  +C+ G +DEA+ L   M +    P   +Y I++ GFCK  ++  +
Sbjct: 520 ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 579

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           + +L  M EKG  P+   Y  L+ G+
Sbjct: 580 LILLQMMLEKGLVPDTIAYTCLLNGL 605



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 203/444 (45%), Gaps = 19/444 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYGEPDVF 107
           + G  DE+L   E MV     PD    T L+  F +  K   A+ ++++ LEK   PD  
Sbjct: 537 KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTI 596

Query: 108 AYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           AY  L++G     Q++ A+ +   +  + G   D + YN M+      G I    ++   
Sbjct: 597 AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 656

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +  +   P+  +Y IL+   + +GQ  + + L  +M                 G+C+ G+
Sbjct: 657 MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 716

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +F+  +   G  PD +++++L++      K     +L + M    + P+  TY  
Sbjct: 717 IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVA 776

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++ L R    + + ++L    E GL P    Y  LI+A C+ G +D A E  + M + G
Sbjct: 777 MVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 836

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P  V  ++I+   CK G  ++A+ +F  +   G  P ++++ T+   L        A 
Sbjct: 837 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 896

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   M S G++ D +TYN LI+ LC    + +A+ L  +M+S    P + +Y  +    
Sbjct: 897 HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 956

Query: 450 CKTRRINESIEVLAAMFEKGCKPN 473
             T  + +  ++L  + ++G  P+
Sbjct: 957 YATGTMQDGEKLLKDIEDRGIVPS 980


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 211/461 (45%), Gaps = 25/461 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   R GK D++   I  M      PDV     +I    + R+ ++A+   E  E   
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI---EFFETMP 72

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           EPDV  YN L+ G CK  ++  A  +   +   G +P  VTY  +I   C     E+A+ 
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +   +    C PTV +Y  +I                   G+CK   V QA+Q    ++ 
Sbjct: 133 LLQLMASRKCSPTVYSYCSIIN------------------GLCKNRKVDQAYQLFEEMKL 174

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC+PD ++YN L+  L    +  E + L+T M+    +P+ +T++ LI  LC   + ++
Sbjct: 175 AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKE 234

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-DYMISDGCLPDIVNYNTIL 341
           A  + +   ++G  PD  ++  L+S  C   +L  A+  + +Y     C   ++ Y  I 
Sbjct: 235 AFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY---PACPEAVILYTPIF 291

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               +    D+A  + +K++  G  PNV +Y   F  L    + +RA      ML +GIE
Sbjct: 292 RELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIE 351

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD + YN L+   C+   +D A  ++  M+ +   P +++YN ++   C+  ++    E+
Sbjct: 352 PDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 411

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           L  M  +G +P+  T+  L+ G+   G    A    N  +S
Sbjct: 412 LHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMS 452



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 172/364 (47%), Gaps = 21/364 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  LI    +  +F+ +   ++ M +  C P V     +I    + RK ++A ++ E
Sbjct: 111 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 170

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G +PD   YN LI G C   ++  A  +L  +    F PD +T+  +I  LC+  
Sbjct: 171 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTD 230

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            I+ AF +F  + +  C P ++T+T+L+                    +C +  +  A  
Sbjct: 231 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSK------------------LCIRRKLRPALS 272

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            VR+  +  C   VI Y  + R L     ++   +L+ +M  RG+ PNVVTY+     L 
Sbjct: 273 VVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLG 330

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              +   A    R   E+G+ PD  +Y+ L+  +CK  RLD+A + + YM   G  P+IV
Sbjct: 331 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIV 390

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT++   C+ G  +   E+   +   G  P+V++++T+ + L+  G    A   ++  
Sbjct: 391 TYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLA 450

Query: 396 LSKG 399
           +S+G
Sbjct: 451 MSQG 454



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 4/260 (1%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S+ C+P+ +SY  L++ L   GK ++    + EM    L P+V TY+++I +LC+  +  
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A++      E    PD  +Y+ L+   CK+GR+  A      M   G  P  V Y T++
Sbjct: 63  RAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             FCK    + A  + + ++   C P V SY ++ + L  +    +A  +  EM   G +
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD +TYN+LI  LC    + EA  LL  M    F+P  I++  +I G C T RI E+  +
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 462 LAAMFEKGCKPNETTYVLLI 481
              M ++GC P+  T+ +L+
Sbjct: 239 FQGMAKQGCAPDLVTHTVLV 258



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 176/420 (41%), Gaps = 56/420 (13%)

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           S+   P+ ++Y  ++ +LC  G I+ A     ++ R+   P V TY ++I       +  
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 194 KAMKLLDEM-------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           +A++  + M             G+CK G V QA     S+E  G  P  ++Y  L+    
Sbjct: 63  RAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
            M ++E    L+  M SR   P V +Y  +I+ LC++ K + A  +    K  G  PD  
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ LI   C   RL  A + L  M+ +   PD + +  ++   C      +A  +F+ +
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 361 SDVGCPPNVSS---------------------------------YNTMFSALWSSGDKIR 387
           +  GC P++ +                                 Y  +F  L       R
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDR 302

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-----FRPTVISY 442
           A  ++ +M  +G+ P+ +TY +        G+ D   G+    E  R       P +++Y
Sbjct: 303 AARLLQKMARRGVAPNVVTYTAFFK-----GLGDWKEGMRAYREFRRMLEQGIEPDMVAY 357

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           N+++ GFCK  R++ + +++  M + G  PN  TY  L+      G      EL + +VS
Sbjct: 358 NVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS 417



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 57/357 (15%)

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +   +CKP  ++Y  L++A    G+ DKA   + EM   ++ +V                
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMA--REKLV---------------- 42

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PDV +YN+++ TL    +     +    M     EP+VVTY+ L+  LC++G+   A  +
Sbjct: 43  PDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSL 98

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
             + +  G+TP   +Y  LI  +CK  + + A   L  M S  C P + +Y +I+   CK
Sbjct: 99  FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 158

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           N   DQA ++FE++   GC P+  +YNT+   L        A  +++ M+    +PD+IT
Sbjct: 159 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKIT 218

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV----- 461
           + +LI  LC    + EA  L   M      P ++++ +++   C  R++  ++ V     
Sbjct: 219 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP 278

Query: 462 ----------------------------LAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                                       L  M  +G  PN  TY    +G+  G W+
Sbjct: 279 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL--GDWK 333



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 19/263 (7%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           SF   +  F  LI+      +  E+    + M   GC PD+V  T L+ K    RK   A
Sbjct: 211 SFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPA 270

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           + V+       E  V  Y  +     +    + A ++L ++  RG +P+VVTY      L
Sbjct: 271 LSVVRNYPACPEA-VILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL 329

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
                   A++ F ++L    +P ++ Y +L+       + D A K+             
Sbjct: 330 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKM------------- 376

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                VR ++  G  P++++YN L+      GK E   +L+  M+SRG +P+V T+S L+
Sbjct: 377 -----VRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 431

Query: 272 SSLCRDGKTEDAVDVLRAAKEKG 294
           + L R G+ + A   L  A  +G
Sbjct: 432 AGLFRVGQVDAAYSFLNLAMSQG 454


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 252/486 (51%), Gaps = 23/486 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSN 89
           +S DVK   F  L+      GK +++L  +E MV+     PD V    ++K   ++ + +
Sbjct: 200 VSLDVK--TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLS 257

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
               ++  +++ G  P+   YN L+ G+CK   ++ A ++++ ++     PD+ TYNI+I
Sbjct: 258 DVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILI 317

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
             +C+ G I    ++ D +     +P V+TY  LI      G + +A KL+++M      
Sbjct: 318 NGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVK 377

Query: 203 -----------GMCKKGMVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       +CK+    +  + V+ L E  G  PD+++Y+ L++  L +G      +
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           +M EM  +G++ N +T + ++ +LC++ K ++A ++L +A ++G   D  +Y  LI  Y 
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYF 497

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           ++ +++ A E  D M      P +  +N+++   C +G  + A+E F++L++ G  P+  
Sbjct: 498 REEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDC 557

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N++       G   +A    +E +    +PD  T N L++ LC++GM ++A+     +
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
            + R   TV +YN +I  FCK +++ E+ ++L+ M EK  +P+  TY  +I  +   G  
Sbjct: 618 ITEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKL 676

Query: 491 AEAMEL 496
           +EA EL
Sbjct: 677 SEADEL 682



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 237/520 (45%), Gaps = 30/520 (5%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
            PN HL S    +  F   +     AGK   +L   + M+    KP+++ C  L+    +
Sbjct: 120 HPNLHL-SPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVR 178

Query: 85  ERKSNKAVRVMEILE---KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSP 139
              S       E+ +   K G   DV  +N L++G+C   ++E A  +L+R+ S    +P
Sbjct: 179 YPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNP 238

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           D VTYN ++ ++  +G +     +   + R+   P  +TY  L+      G   +A +++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298

Query: 200 DEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           + M                 G+C  G + +  + +  ++S   QPDV++YN L+     +
Sbjct: 299 ELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFEL 358

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE----KGLTPD 298
           G   E +KLM +M + G++PN VT++I +  LC++ K E+   V R  KE     G +PD
Sbjct: 359 GLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREE---VTRKVKELVEMHGFSPD 415

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  LI AY K G L  A+E +  M   G   + +  NTIL A CK    D+A  + +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD 475

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
                G   +  +Y T+    +      +A  M  EM    I P   T+NSLI  LC  G
Sbjct: 476 SAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG 535

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
             + A+    ++  +   P   ++N IILG+CK  R+ ++ E      +   KP+  T  
Sbjct: 536 KTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
           +L+ G+   G   +A+   N L++   +   T+  +   F
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAF 635



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 19/275 (6%)

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIEL 124
           +G  PD+V    LIK + +    + A+ +M E+ +K  + +    N ++   CK  +++ 
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDE 469

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A+ +LD    RG+  D VTY  +I        +E AF+++D++ R    PTV T+  LI 
Sbjct: 470 AHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIG 529

Query: 185 ATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQP 227
                G+T+ AM+  DE+                 G CK+G V +AF+F         +P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D  + N+LL  L   G  E+       +I+   E + VTY+ +IS+ C+D K ++A D+L
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
              +EK L PD ++Y+ +I++  +DG+L  A E L
Sbjct: 649 SEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELL 683



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 178/400 (44%), Gaps = 34/400 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
           LI   F  G   E+   +E M  +G KP+ V     +K   +E K  +  R V E++E +
Sbjct: 351 LIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH 410

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD+  Y+ LI  + K   +  A +++  +  +G   + +T N ++ +LC    ++ A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
             + D   +       +TY  LI     E + +KA ++ DEM                 G
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C  G    A +    L   G  PD  ++N ++      G+ E+  +   E I    +P+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRA-AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
             T +IL++ LC++G TE A++       E+ +  D  +Y+ +ISA+CKD +L  A + L
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLL 648

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M      PD   YN+I+ +  ++G   +A E+ +K S          + +M   L   
Sbjct: 649 SEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFS--------GKFGSMKRNLHLE 700

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            +K  A     E L    + + I Y+ +I+ LC  G + E
Sbjct: 701 TEKNPATSESKEEL----KTEAIAYSDVINELCSRGRLKE 736


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 229/489 (46%), Gaps = 54/489 (11%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P +     LI  + + R+ +  + V   L + G  PDVF+YNALI GF K  +++ A+ +
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++  +G  P+VVTY+ +I  LC    ++ A +V  Q++    +P  +TY  LI     
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G   +++++  EM                  +CK G + +A     S+  +G +PDVIS
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 232 YNMLLR-------------------------------TLLN----MGKWEEGEKLMTEMI 256
           Y  LL                                TL+N    +G  ++   +  +M 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +G+ P+++T+S +IS+ CR G+ +DA++      + G+ PD   Y  LI   C    L 
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 317 LAIEFLDYMISDGCLPDIVNYNT-ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
            A E +  M+S G  P  + + T I+   CK G   +  ++ + +   G  PN+ ++N++
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 475

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G+   A+G++  M S G+EPD  TYN+L+   C+ G +D+A+ L  DM   R 
Sbjct: 476 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 535

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
             T +SYNII+ G  + RR   + E+   M E G   +  TY  ++ G+       EA  
Sbjct: 536 TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANM 595

Query: 496 LANALVSMH 504
           L   L SM+
Sbjct: 596 LLEKLFSMN 604



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 214/467 (45%), Gaps = 19/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G+  E+    +SMV  G KPDV+    L+  +           +  ++   G  PD  
Sbjct: 270 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 329

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI+ + +   ++ +  + + +  +G +PD++T++ +I + C  G ++ A + F+ +
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +     P    Y+ LIQ         KA +L+ +M                   +CK+G 
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +    V  +   G +P++I++N L+     +G  +E   L+  M S G+EP++ TY+ 
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+   C+ G+ +DA+ + R    K +T  + SY+ ++    +  R  +A E    MI  G
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 569

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               I  Y T+L   C+N   D+A  + EKL  +    ++ ++N +  A++  G +  A 
Sbjct: 570 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 629

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + + + + G+ P  +TY  +I+ L ++   ++A  L   ME +   P     N II   
Sbjct: 630 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 689

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                + ++   L+ + +KG  P  TT  LLI      G   E ++L
Sbjct: 690 LNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 736



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 18/323 (5%)

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           FK  D+       PT+ TY ILI       + D  + +                 F R L
Sbjct: 103 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPV-----------------FGRLL 145

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            + G  PDV SYN L+      G+ ++   L  +M  +G+ PNVVTYS LI+ LC+  + 
Sbjct: 146 RT-GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEM 204

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  VLR     G+ P+  +Y+ LI  Y   G    ++     M S   +PD+ N N+ 
Sbjct: 205 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 264

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + A CK+G   +A +IF+ +   G  P+V SY  +     ++G       + + M+ +G+
Sbjct: 265 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 324

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD   +N+LI+   R GM+D+++ +  DM      P +I+++ +I  FC+  R+++++E
Sbjct: 325 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 384

Query: 461 VLAAMFEKGCKPNETTYVLLIEG 483
               M + G  P+   Y  LI+G
Sbjct: 385 KFNHMIDTGVPPDTAVYSCLIQG 407



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 186/425 (43%), Gaps = 20/425 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LI    R G  D+SL   E M   G  PD++  + +I  F +  + + A+ +   ++
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY-NIMIGSLCSRGMI 157
           +    PD   Y+ LI G C    +  A +++  + S+G  P  + +   +I +LC  G +
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
                V D ++    +P +IT+  L+    L G   +A+ LLD                 
Sbjct: 451 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD----------------- 493

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            S+ES G +PD+ +YN L+      G+ ++   L  +M+ + +    V+Y+I++  L + 
Sbjct: 494 -SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 552

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +T  A ++     E G+    ++Y  ++   C++   D A   L+ + S     DI+ +
Sbjct: 553 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 612

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A  K G   +A E+F  +S  G  P + +Y  M + L        A  + S M  
Sbjct: 613 NIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 672

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
               PD    N +I  L   G V +A   L  ++     P   + +++I  F    +  E
Sbjct: 673 SSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 732

Query: 458 SIEVL 462
            I++L
Sbjct: 733 YIKLL 737



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 18/224 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+ D++L     M+        V    ++   FQ R++  A  +  E++E      + 
Sbjct: 516 KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH 575

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++ G C+ N  + AN +L++L S     D++T+NI+I ++   G  + A ++F  +
Sbjct: 576 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 635

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
                 PT++TY ++I   + E   + A  L   M                  +  KG V
Sbjct: 636 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 695

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
            +A  ++  ++ +G  P+  + ++L+      GK+ E  KL+ E
Sbjct: 696 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 218/486 (44%), Gaps = 55/486 (11%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           +E  F KL     +   +  ++  I+ + + G KPDV   T +I        +     V+
Sbjct: 70  REKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVL 129

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            ++ K G +P V  +  LI+G C    +  A +  D L   G   +  TY  +I  LC  
Sbjct: 130 GVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKA 189

Query: 155 GMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           G    A    +++   NC    VI Y+ ++ +                  +CK GMV +A
Sbjct: 190 GDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS------------------LCKDGMVCEA 231

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                 + S+G QPD+++YN L+  L N G+W+E   L+  M+ +G+ PNV T+++L+ +
Sbjct: 232 LNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDN 291

Query: 274 LCRDG-----------------------------------KTEDAVDVLRAAKEKGLTPD 298
            C+DG                                   +  DAV V      KG  P+
Sbjct: 292 FCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPN 351

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
             +Y  LI  +CK   ++ A+  L  M++ G  PD+V ++T++  FCK G  + A E+F 
Sbjct: 352 LVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFC 411

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
            + +    PN+ +   +   L+       A+ +  EM    +E + + YN ++  +C  G
Sbjct: 412 TMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFG 471

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +++A  L   + S   +  V++Y  +I G CK   ++++  +L  M E GC PNE TY 
Sbjct: 472 KLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYN 531

Query: 479 LLIEGI 484
           + + G+
Sbjct: 532 VFVRGL 537



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 200/438 (45%), Gaps = 19/438 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M   G  P VV    LI     E    +A R  + LE  G + + + Y A+I+G CKA  
Sbjct: 132 MFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGD 191

Query: 122 IELANKVLDRLRSRGFSPDVV-TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
              A   L++++ R    DVV  Y+ ++ SLC  GM+  A  +F  +     +P ++ Y 
Sbjct: 192 TSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYN 251

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            LI      G+  +A  LL  M                   CK GM+ +A   +  +   
Sbjct: 252 SLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHV 311

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +PDV++YN ++     + +  +  K+   MI +G  PN+VTYS LI   C+      A
Sbjct: 312 GVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKA 371

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L      GL PD  ++  LI  +CK G+ + A E    M      P++     IL  
Sbjct: 372 LFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDG 431

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             K     +A+ +F ++  +    NV  YN +   + S G    A  + S + SKGI+ D
Sbjct: 432 LFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKID 491

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            + Y ++I  LC++G++D+A  LL+ ME     P   +YN+ + G  +   I+ S + L 
Sbjct: 492 VVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLL 551

Query: 464 AMFEKGCKPNETTYVLLI 481
            M  KG   + TT  LLI
Sbjct: 552 LMKGKGLSADATTTELLI 569



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 197/422 (46%), Gaps = 53/422 (12%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           ++  + S G  PDV T  I+I  LC        F V   + +    PTV+T+  LI    
Sbjct: 93  LIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLC 152

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV- 229
            EG   +A +  D +                 G+CK G    A  ++  ++ R C  DV 
Sbjct: 153 AEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVV 212

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           I+Y+ ++ +L   G   E   L + M S+G++P++V Y+ LI  LC  G+ ++A  +L  
Sbjct: 213 IAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGN 272

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              KG+ P+  +++ L+  +CKDG +  A   + +M+  G  PD+V YN++++  C    
Sbjct: 273 MMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQ 332

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A+++FE +   G  PN+ +Y+++      + +  +AL ++ EM++ G+ PD +T+++
Sbjct: 333 MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWST 392

Query: 410 LISCLCR------------------------------DGMV-----DEAVGLLVDMESTR 434
           LI   C+                              DG+       EA+ L  +ME   
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
               V+ YNI++ G C   ++N++ E+ + +  KG K +   Y  +I+G+   G   +A 
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 495 EL 496
            L
Sbjct: 513 NL 514



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 19/383 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMC-TKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           +AG    ++ ++E +    C  DVV+  + ++    ++    +A+ +   +   G +PD+
Sbjct: 188 KAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDL 247

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            AYN+LI G C   + + A  +L  +  +G  P+V T+N+++ + C  GMI  A  +   
Sbjct: 248 VAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGF 307

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           ++    +P V+TY  +I    L  Q   A+K+ + M                 G CK   
Sbjct: 308 MVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKN 367

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   +  + + G  PDV++++ L+      GK E  ++L   M      PN+ T +I
Sbjct: 368 INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAI 427

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++  L +     +A+ + R  ++  L  +   Y+ ++   C  G+L+ A E    + S G
Sbjct: 428 ILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKG 487

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              D+V Y T++   CK G  D A  +  K+ + GC PN  +YN     L    D  R+ 
Sbjct: 488 IKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRST 547

Query: 390 GMISEMLSKGIEPDEITYNSLIS 412
             +  M  KG+  D  T   LIS
Sbjct: 548 KYLLLMKGKGLSADATTTELLIS 570



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 158/325 (48%), Gaps = 19/325 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G++ E+   + +M+  G  P+V     L+  F ++   ++A  +M  +   G EPDV  Y
Sbjct: 261 GRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N++ISG C  +Q+  A KV + +  +GF P++VTY+ +I   C    I  A  +  +++ 
Sbjct: 321 NSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVN 380

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+T++ LI      G+ + A +L   M                 G+ K     +
Sbjct: 381 SGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSE 440

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    R +E    + +V+ YN++L  + + GK  + ++L + + S+G++ +VV Y+ +I 
Sbjct: 441 AISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIK 500

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC++G  +DA ++L   +E G  P+ ++Y+  +    +   +  + ++L  M   G   
Sbjct: 501 GLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSA 560

Query: 333 DIVNYNTILAAFCKNGNADQALEIF 357
           D      +++ F  N   + AL +F
Sbjct: 561 DATTTELLISYFSAN-KENSALHVF 584



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 36/307 (11%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV-------- 264
           A  F   +      P    +  L   ++ M  +     L+  + S G++P+V        
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 265 ---------------------------VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                                      VT++ LI+ LC +G    A     + ++ G   
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV-NYNTILAAFCKNGNADQALEI 356
           ++Y+Y  +I+  CK G    AI +L+ +    C  D+V  Y+TI+ + CK+G   +AL +
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           F  ++  G  P++ +YN++   L + G    A  ++  M+ KGI P+  T+N L+   C+
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK 294

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           DGM+  A  ++  M      P V++YN +I G C   ++ ++++V   M  KG  PN  T
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354

Query: 477 YVLLIEG 483
           Y  LI G
Sbjct: 355 YSSLIHG 361



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/220 (18%), Positives = 80/220 (36%), Gaps = 37/220 (16%)

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+ F   M+    LP   ++  +     K  +    + + + +  +G  P+V +   + +
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L      +    ++  M   G++P  +T+ +LI+ LC +G V  A      +E    + 
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 438 TVISYNIIILGFCKT------------------------------------RRINESIEV 461
              +Y  II G CK                                       + E++ +
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 462 LAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAMELANAL 500
            + M  KG +P+   Y  LI G+  +G W+     L N +
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMM 274



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 45/116 (38%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           AL    +M+     P E  +  L   + +       + L+  + S   +P V +  III 
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             C          VL  MF+ G  P   T+  LI G+   G  A A   A++L  M
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDM 170


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 208/456 (45%), Gaps = 53/456 (11%)

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           VR M   E    PD F+YN +I+G  ++ +   A KV D +   G  P+ +TYN MI   
Sbjct: 2   VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 61

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
              G +E+ F++ DQ+L D  KP ++TY +L+      G+ D+   L+DEM         
Sbjct: 62  VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 121

Query: 203 -------------------------------------------GMCKKGMVGQAFQFVRS 219
                                                      G+CK G V +A Q +  
Sbjct: 122 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 181

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L   G  P  + YN L+     +        +  +M SR + P+ +TY+ LI+ LC+   
Sbjct: 182 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 241

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
              A D++   ++ G+ P   +++ LI AY   G+L+     L  M   G   D++++ +
Sbjct: 242 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 301

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++ AFCKNG   +A+ I + +      PN   YN++  A   SGD  +A  ++ +M + G
Sbjct: 302 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 361

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           +    +TYN L+  LCR   +DEA  L+  + +   RP V+SYN II   C     ++++
Sbjct: 362 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 421

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           E+L  M + G +P   TY  L+  +   G R   ME
Sbjct: 422 ELLQEMNKYGIRPTLRTYHTLVSALASAG-RVHDME 456



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 236/486 (48%), Gaps = 25/486 (5%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           VR    +E  P     S++V       +I   +R+GK  ++L   + MV  G  P+ +  
Sbjct: 2   VRRMGRSEGAPPPDAFSYNV-------VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITY 54

Query: 76  TKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
             +I    +        R+  ++L    +P++  YN L+SG C+A +++    ++D + S
Sbjct: 55  NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS 114

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               PD  TY+I+   L   G   +   +F + L+        T +IL+     +G+  K
Sbjct: 115 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 174

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A ++L+ +                 G C+   +  AF     ++SR  +PD I+YN L+ 
Sbjct: 175 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 234

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L  +    + E L+ EM   G++P+V T++ LI +    G+ E    VL   ++KG+  
Sbjct: 235 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 294

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D  S+  ++ A+CK+G++  A+  LD MI     P+   YN+I+ A+ ++G+ +QA  + 
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           EK+ + G   ++ +YN +   L  S     A  +I  + ++G+ PD ++YN++IS  C  
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G  D+A+ LL +M     RPT+ +Y+ ++       R+++   +   M  K  +P+ + Y
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474

Query: 478 VLLIEG 483
            ++++ 
Sbjct: 475 GIMVDA 480



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 26/451 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P  ++++++V       L+    RAG+ DE+   ++ M ++   PD    + L     + 
Sbjct: 82  PKPNIVTYNV-------LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 86  RKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +S   + +  E L+K      +  + L++G CK  ++  A +VL+ L   G  P  V Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N +I   C    +  AF +F+Q+   + +P  ITY  LI                   G+
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN------------------GL 236

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK  MV +A   V  +E  G  P V ++N L+      G+ E+   ++++M  +G++ +V
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 296

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +++  ++ + C++GK  +AV +L     K + P+A  Y+ +I AY + G  + A   ++ 
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 356

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M + G    IV YN +L   C++   D+A E+   L + G  P+V SYNT+ SA  + GD
Sbjct: 357 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +AL ++ EM   GI P   TY++L+S L   G V +   L   M      P+   Y I
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 476

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           ++  + +    ++   +   M EKG   ++T
Sbjct: 477 MVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 229/489 (46%), Gaps = 54/489 (11%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           P +     LI  + + R+ +  + V   L + G  PDVF+YNALI GF K  +++ A+ +
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
             ++  +G  P+VVTY+ +I  LC    ++ A +V  Q++    +P  +TY  LI     
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 189 EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            G   +++++  EM                  +CK G + +A     S+  +G +PDVIS
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 232 YNMLLR-------------------------------TLLN----MGKWEEGEKLMTEMI 256
           Y  LL                                TL+N    +G  ++   +  +M 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +G+ P+++T+S +IS+ CR G+ +DA++      + G+ PD   Y  LI   C    L 
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 317 LAIEFLDYMISDGCLPDIVNYNT-ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
            A E +  M+S G  P  + + T I+   CK G   +  ++ + +   G  PN+ ++N++
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 546

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G+   A+G++  M S G+EPD  TYN+L+   C+ G +D+A+ L  DM   R 
Sbjct: 547 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
             T +SYNII+ G  + RR   + E+   M E G   +  TY  ++ G+       EA  
Sbjct: 607 TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANM 666

Query: 496 LANALVSMH 504
           L   L SM+
Sbjct: 667 LLEKLFSMN 675



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 214/467 (45%), Gaps = 19/467 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G+  E+    +SMV  G KPDV+    L+  +           +  ++   G  PD  
Sbjct: 341 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 400

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI+ + +   ++ +  + + +  +G +PD++T++ +I + C  G ++ A + F+ +
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
           +     P    Y+ LIQ         KA +L+ +M                   +CK+G 
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +    V  +   G +P++I++N L+     +G  +E   L+  M S G+EP++ TY+ 
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+   C+ G+ +DA+ + R    K +T  + SY+ ++    +  R  +A E    MI  G
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 640

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               I  Y T+L   C+N   D+A  + EKL  +    ++ ++N +  A++  G +  A 
Sbjct: 641 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 700

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + + + + G+ P  +TY  +I+ L ++   ++A  L   ME +   P     N II   
Sbjct: 701 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 760

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
                + ++   L+ + +KG  P  TT  LLI      G   E ++L
Sbjct: 761 LNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 807



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 18/323 (5%)

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           FK  D+       PT+ TY ILI       + D  + +                 F R L
Sbjct: 174 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPV-----------------FGRLL 216

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            + G  PDV SYN L+      G+ ++   L  +M  +G+ PNVVTYS LI+ LC+  + 
Sbjct: 217 RT-GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEM 275

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A  VLR     G+ P+  +Y+ LI  Y   G    ++     M S   +PD+ N N+ 
Sbjct: 276 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 335

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + A CK+G   +A +IF+ +   G  P+V SY  +     ++G       + + M+ +G+
Sbjct: 336 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 395

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PD   +N+LI+   R GM+D+++ +  DM      P +I+++ +I  FC+  R+++++E
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455

Query: 461 VLAAMFEKGCKPNETTYVLLIEG 483
               M + G  P+   Y  LI+G
Sbjct: 456 KFNHMIDTGVPPDTAVYSCLIQG 478



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 186/425 (43%), Gaps = 20/425 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV-RVMEIL 98
           F  LI    R G  D+SL   E M   G  PD++  + +I  F +  + + A+ +   ++
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY-NIMIGSLCSRGMI 157
           +    PD   Y+ LI G C    +  A +++  + S+G  P  + +   +I +LC  G +
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 521

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
                V D ++    +P +IT+  L+    L G   +A+ LLD                 
Sbjct: 522 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD----------------- 564

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            S+ES G +PD+ +YN L+      G+ ++   L  +M+ + +    V+Y+I++  L + 
Sbjct: 565 -SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 623

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +T  A ++     E G+    ++Y  ++   C++   D A   L+ + S     DI+ +
Sbjct: 624 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 683

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++ A  K G   +A E+F  +S  G  P + +Y  M + L        A  + S M  
Sbjct: 684 NIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 743

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
               PD    N +I  L   G V +A   L  ++     P   + +++I  F    +  E
Sbjct: 744 SSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE 803

Query: 458 SIEVL 462
            I++L
Sbjct: 804 YIKLL 808



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 18/224 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+ D++L     M+        V    ++   FQ R++  A  +  E++E      + 
Sbjct: 587 KHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIH 646

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++ G C+ N  + AN +L++L S     D++T+NI+I ++   G  + A ++F  +
Sbjct: 647 TYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAI 706

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMV 210
                 PT++TY ++I   + E   + A  L   M                  +  KG V
Sbjct: 707 STYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 766

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
            +A  ++  ++ +G  P+  + ++L+      GK+ E  KL+ E
Sbjct: 767 AKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 52/445 (11%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  +N +I    K     +A  +L ++  +G +P + T +I I   C  G +  AF V
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK----------LLDEM-------GMCK 206
              +L+   +P  IT T +++   + G+  KAM           LLDE+       G+CK
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 207 KGMVGQAFQFVRSLESR-----------------------------------GCQPDVIS 231
            G    AFQ ++ +E +                                   G  PD+++
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y  L+R     G+W E ++LM EM+++ + PNV T+++LI + CR GK  +A  +     
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G  PD  +++ LIS +C  G +  A +  D +   G LPD+ +Y  ++  +CK    D
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A+ +F ++       ++  Y+++   L  SG    A  + S + + G  P+ ITYN LI
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C+   +D  + L   M      PTV++YNI+I G+CK++RI E++ +L+ M  K   
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P+  TY  L +G+   G  ++A EL
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWEL 526



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 196/406 (48%), Gaps = 19/406 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAY 109
           G+  +++ F +++ A G   D V    LI    +  +S  A ++++ +E +  +P++  Y
Sbjct: 168 GEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIY 227

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N +I  FCK      A  +  ++   G  PD++TY  +I   C  G      ++  +++ 
Sbjct: 228 NMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVN 287

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            N  P V T+ +LI A                   C+KG + +A      +  RG QPD+
Sbjct: 288 KNINPNVYTFNVLIDA------------------FCRKGKMIEAQGMFNLMVKRGQQPDI 329

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +++N L+      G   E  KL   +  RG+ P+V +Y+ILI   C+  + ++AV +   
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE 389

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            + K +  D   Y  LI   CK GR+  A E    + +DG  P+++ YN ++ AFCK  +
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD 449

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D  +E+F+ +   G  P V +YN + +    S     A+ ++S M SK + PD ITYNS
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L   LC+ G + +A  L   M        V +YN+++  FCK + +
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 181/366 (49%), Gaps = 18/366 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-M 95
           E  +  LI    + G+  ++   ++ M     KP++V+   +I  F ++  + KA  + +
Sbjct: 189 EVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +I++   +PD+  Y +LI GFC+  Q     +++  + ++  +P+V T+N++I + C +G
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-------------- 201
            +  A  +F+ +++   +P ++T+  LI    L G   +A KL D               
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368

Query: 202 ---MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
              +G CK   + +A      +  +    D++ Y+ L+  L   G+     +L + + + 
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  PNV+TY+ILI + C+    +  +++ +    KGLTP   +Y+ LI+ YCK  R+  A
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +  L  M S    PD + YN++    CK+G    A E+F+ +   G P +V++YN +  A
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548

Query: 379 LWSSGD 384
              + D
Sbjct: 549 FCKAQD 554



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 184/381 (48%), Gaps = 18/381 (4%)

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           N I+ A  + + L +    P V+ +N +IGS+        A  +  Q++     P++ T 
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +I I                     C  G +G AF  +  +  RG QP+ I+   +++ L
Sbjct: 123 SIWINC------------------YCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGL 164

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
              G+ ++       + ++G+  + V Y  LI+ LC+ G++ DA  +L+  + + + P+ 
Sbjct: 165 CINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNI 224

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
             Y+ +I ++CKD     A +    ++  G  PDI+ Y +++  FC+ G   +  ++  +
Sbjct: 225 VIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE 284

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + +    PNV ++N +  A    G  I A GM + M+ +G +PD +T+N+LIS  C  G 
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           V EA  L   +      P V SY I+I+G+CK +RI+E++ +   M  K    +   Y  
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404

Query: 480 LIEGIGYGGWRAEAMELANAL 500
           LI+G+   G  + A EL + +
Sbjct: 405 LIDGLCKSGRISYAWELFSTI 425



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 123/256 (48%)

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           ++   L   +I+    P+V+ ++ +I S+ +      A+ +L+    KG+TP  ++    
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I+ YC  G +  A   L  ++  G  P+ +   T++   C NG   +A++  + ++  G 
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +   Y T+ + L   G  I A  ++ EM  + ++P+ + YN +I   C+D +  +A  
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L + +      P +++Y  +I GFC+T +  E  +++  M  K   PN  T+ +LI+   
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 486 YGGWRAEAMELANALV 501
             G   EA  + N +V
Sbjct: 306 RKGKMIEAQGMFNLMV 321



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 103/218 (47%), Gaps = 3/218 (1%)

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A+   +++I+   LP ++ +NTI+ +  K  +   A+ + +++   G  P++ + + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
             +     G+   A  ++  +L +G +P+ IT  +++  LC +G V +A+    ++ +  
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
                + Y  +I G CK  R  ++ ++L  M  +  KPN   Y ++I+         +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 495 ELANALVSMHAISRD--TFKRLNRTFPLLDVYKEISHL 530
           +L   +V M  I  D  T+  L R F     + E+  L
Sbjct: 245 DLYLKIVDM-GIDPDILTYTSLIRGFCRTGQWGEVKQL 281


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 35/477 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+  ++L  ++ MV  G +PD V    ++       K    V  + +L 
Sbjct: 13  FTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMC---KLGDTVSALNMLR 69

Query: 100 KYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           K  E     +V  Y+A++   CK      A  +   +  +G  P+V+TYN MI   CS G
Sbjct: 70  KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYG 129

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
               A ++   ++  N  P V+T++ LI A + EG+   A +L  EM             
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL-------RTLLN----MGKWEE 247
               G CK   +  A      + S+GC PD+I+ N L+       R L++    +G    
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNV 249

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            + L  EMIS G+ P++VT + L++ LC +GK E A+++ +  ++  +  D  + + +I+
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK  ++D A +  + +  +G   D+V YN ++  F K GN  +A +I+ ++   G  P
Sbjct: 310 GMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  +YN+M            A  M+  M+S+G  PD +T+++LI   C+ G VD+ + L 
Sbjct: 370 STVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF 429

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +M         I+YN +I GFCK   +N + ++   M   G  P+  T+  ++ G+
Sbjct: 430 SEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 209/461 (45%), Gaps = 63/461 (13%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V  +  L++G C+  ++  A  ++DR+   G  PD VTY  ++  +C  G   SA  + 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
            ++     K  V+ Y+ ++     +G   KA  +  EM                 G C  
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSY 128

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G    A Q +R +  R   PDV++++ L+   +  GK    E+L  EM+ R + P  +TY
Sbjct: 129 GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP-----------LISAYCKDGRLD 316
           S +I   C+  + EDA  +      KG +PD  + +            LI  +C+ G ++
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVN 248

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE------------------ 358
           +A +    MIS+G  PDIV  NT+LA  C+NG  ++ALE+F+                  
Sbjct: 249 VAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIII 308

Query: 359 -----------------KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
                             L   G   +V +YN +       G+ +RA  +  EML KGI 
Sbjct: 309 NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           P  +TYNS++   C+   ++EA  ++  M S    P V++++ +I G+CK  R+++ +E+
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            + M ++G   +  TY  LI G    G    A ++   +VS
Sbjct: 429 FSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVS 469



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 189/428 (44%), Gaps = 98/428 (22%)

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           ++   C   V+T+T L+     EG+  +A+ L+D M                 GMCK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 210 VGQAFQFVRSLE-----------------------------------SRGCQPDVISYNM 234
              A   +R ++                                    +G  P+V++YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++    + GKW + E+L+ +MI R ++P+VVT+S LI++  ++GK   A ++ R    + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT-----------ILAA 343
           + P   +Y  +I  +CK  RL+ A    D M+S GC PDI+  NT           ++  
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM------------ 391
           FC+ GN + A ++F+++   G  P++ + NT+ + L  +G   +AL M            
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 392 -----------------------ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
                                   + +   G+E D +TYN LI    ++G    A  + +
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M      P+ ++YN ++ GFCK  R+ E+ +++ +M  +GC P+  T+  LI+G    G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 489 WRAEAMEL 496
              + +EL
Sbjct: 421 RVDDGLEL 428



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 105/211 (49%)

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           E G   +  ++  L++  C++GR+  A+  +D M+ +G  PD V Y TI+   CK G+  
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            AL +  K+ +     NV  Y+ +   L   G+ I+A  + +EM  KGI P+ +TYN +I
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C  G   +A  LL DM      P V++++ +I  F K  +++ + E+   M  +   
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P   TY  +I+G        +A  + + +VS
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVS 213


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 227/451 (50%), Gaps = 20/451 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMV-ANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           E  F  LI+  F   K  ++++  + +V  N C+P+ VM   ++    ++  + KA  ++
Sbjct: 142 EVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLL 201

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
            ++E+   +P+   Y  +I  FCK   ++ A  +L+ ++ +   PD+ TY+ +I +LC  
Sbjct: 202 RLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKL 261

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              E+   +F +++  N  P V T+  +I                   G+CK+G V  A 
Sbjct: 262 SQWENVRTLFLEMIHLNIYPNVCTFNSVID------------------GLCKEGKVEDAE 303

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + +R +  +G  PDVI+YNM++      G+ +   ++   MI++ +EP++++Y+ILI+  
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGY 363

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            R  K ++A+ V R   +KGL P   + + L+    + GR   A  F D M+S G +PD+
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             + T+L  + KNG  ++A+  F KL       N+  Y  +   L  +G   +A     +
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +   G+ PD ITY ++IS  C++G++DEA  +L  ME         +YN+I+ GF ++ +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNK 543

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           ++E    L  +  K       T  LL++ I 
Sbjct: 544 VSEMKAFLEEIAGKSFSFEAATVELLMDIIA 574



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 222/467 (47%), Gaps = 27/467 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            D++      MV     P V   +KL+K     +  +  V +   + K   P   F  + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +++  C  ++ +L   VL     +G   + VT+  +I  L +   ++ A  +F +L+R+N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 172 -CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P  + Y  ++     +G T KA  LL  M                   CK GM+  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              +  ++ +   PD+ +Y+ L+  L  + +WE    L  EMI   + PNV T++ +I  
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++GK EDA +++R   EKG+ PD  +Y+ +I  Y   G++D A E  D MI+    PD
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I++YN ++  + +    D+A+++  ++S  G  P++ + N +   L+  G    A     
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EMLS G  PD  T+ +L+    ++G+V+EA+     +E  R    +  Y  +I G CK  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 454 RINESIEVLAAMFEK----GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +++++     A FEK    G  P+  TY  +I G    G   EA ++
Sbjct: 473 KLDKA----HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 18/364 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           ++ AF +F Q++R    P+V +++ L++A +        + L  E+              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C        F  +     +G   + +++  L+R L    K ++   L  +++   
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 260 L-EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           + EPN V Y  +++ LC+ G T+ A D+LR  ++    P+  +Y  +I A+CKDG LD A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L+ M      PDI  Y+T++ A CK    +    +F ++  +   PNV ++N++   
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L   G    A  ++  M+ KG++PD ITYN +I      G VD A  +   M +    P 
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +ISYNI+I G+ + ++I+E+++V   + +KG KP+  T  +L+ G+   G    A    +
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 499 ALVS 502
            ++S
Sbjct: 413 EMLS 416



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 185/408 (45%), Gaps = 28/408 (6%)

Query: 11  KSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKP 70
           K+ + +R+     T+PNT   +          +I    + G  D +   +  M      P
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTI---------VIDAFCKDGMLDGATSLLNEMKQKSIPP 246

Query: 71  DVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           D+   + LI    +  +  N     +E++     P+V  +N++I G CK  ++E A +++
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +  +G  PDV+TYN++I     RG ++ A ++FD ++  + +P +I+Y ILI     +
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQ 366

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
            + D+AM                  Q  R +  +G +P +++ N+LL  L  +G+ +  +
Sbjct: 367 KKIDEAM------------------QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
               EM+S G  P++ T+  L+    ++G  E+A+      + +    +   Y  +I   
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK+G+LD A    + +   G  PD++ Y  +++ +C+ G  D+A ++  K+ D GC  + 
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN 528

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            +YN +      S         + E+  K    +  T   L+  +  D
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 26/409 (6%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +IL+   EPD       I GFC   QI  A    D++ + GF  D V+Y  +I  LC  G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 156 MIESAFKVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
             ++A     +LLR N     +P V+ Y  +I                   GMCK   V 
Sbjct: 313 ETKAAL----ELLRRNDGKLVQPDVVMYNTIID------------------GMCKDKHVN 350

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            AF       S+   PDV +YN L+     +GK ++   L  +M S+ + P+V T+SIL+
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILV 410

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C+DG  ++A +VL    ++ + PD  +Y  L+  YC    ++ A    + M   G  
Sbjct: 411 DGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVT 470

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            ++ +YN ++  FCK    D+A+++F+++      P+V +Y+++   L  SG    AL +
Sbjct: 471 ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALEL 530

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  +G +PD ITYNS++  LC+   VD+A+ LL  ++    RP + +Y I++ G C+
Sbjct: 531 VDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQ 590

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + ++ ++ +V   +  KG   +   Y ++I+G    G   EA+ L + +
Sbjct: 591 SGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKM 639



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 224/475 (47%), Gaps = 19/475 (4%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDV 72
           +R+ +    ++R    L SF +        IK+      F+ S+ Y    ++ NG +PD 
Sbjct: 204 KRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDT 263

Query: 73  VMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDR 131
           +  T  IK F  + + ++A+   + +   G   D  +Y  LI+G CK  + + A ++L R
Sbjct: 264 ITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRR 323

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
              +   PDVV YN +I  +C    +  AF ++ + +     P V TY  LI    + G+
Sbjct: 324 NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK 383

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              A+ L ++M                 G CK G + +A   +  +  +  +PDV++Y+ 
Sbjct: 384 LKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+     + +  + E +   M  RG+  NV +Y+I+I+  C+    ++A+ + +    K 
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  +Y  LI   CK GR+  A+E +D M   G  PDI+ YN+IL A CK  + D+A+
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +  KL   G  P++++Y  +   L  SG    A  +  ++L KG   D   Y  +I   
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           C  G+ DEA+ LL  ME     P   +Y IIIL   +    + + ++L  M  +G
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 200/425 (47%), Gaps = 27/425 (6%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLD-RLRSRG 136
            +K F Q R  N  +   +IL +Y       +   I   C     E++ +    ++   G
Sbjct: 207 FLKDFLQSRLFN-VLHSFKILIEY-------HKTFIKQKCLLKSFEISIEYTPPKILKNG 258

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           + PD +T    I   C +G I  A    D+++        ++Y  LI             
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLIN------------ 306

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G    A + +R  + +  QPDV+ YN ++  +       +   L +E +
Sbjct: 307 ------GLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+ + P+V TY+ LIS  C  GK +DA+D+      K + PD Y++  L+  +CKDG + 
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   L  M+     PD+V Y++++  +C     ++A  IF  +S  G   NV SYN M 
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           +          A+ +  EM  K I PD ITY+SLI  LC+ G +  A+ L+ +M     +
Sbjct: 481 NGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ 540

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P +I+YN I+   CK   ++++I +L  +  +G +P+  TY +L++G+   G   +A ++
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600

Query: 497 ANALV 501
              L+
Sbjct: 601 FEDLL 605



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 196/388 (50%), Gaps = 18/388 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + F + +  +  LI    + G+   +L  +        +PDVVM   +I    +++  N 
Sbjct: 292 MGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVND 351

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E + K   PDVF YNALISGFC   +++ A  + +++ S+   PDV T++I++ 
Sbjct: 352 AFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C  G I+ A  V   +++ + KP V+TY+ L+    L  + +KA  + + M       
Sbjct: 412 GFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTA 471

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                     G CK  MV +A +  + +  +   PDVI+Y+ L+  L   G+     +L+
Sbjct: 472 NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELV 531

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM  RG +P+++TY+ ++ +LC+    + A+ +L   K +G+ PD  +Y  L+   C+ 
Sbjct: 532 DEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQS 591

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+L+ A +  + ++  G   D+  Y  ++  FC  G  D+AL +  K+ + GC P+  +Y
Sbjct: 592 GKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
             +  +L+   +   A  ++ EM+ +G+
Sbjct: 652 EIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 152/300 (50%), Gaps = 18/300 (6%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
            GK  +++     M +    PDV   + L+  F ++    +A  V+ ++ K   +PDV  
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y++L+ G+C  N++  A  + + +  RG + +V +YNIMI   C   M++ A K+F ++ 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
                P VITY+ LI      G+   A++L+DEM                  +CKK  V 
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A   +  L+ +G +PD+ +Y +L++ L   GK E+  K+  +++ +G   +V  Y+++I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C  G  ++A+ +L   +E G  PDA +Y+ +I +  +    D+A + L  MI  G L
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 18/306 (5%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F R L      PD I +  +L +L+    +     L  +M  +G++ N +  +ILI+S C
Sbjct: 98  FYRLLRQNPTPPD-IEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFC 156

Query: 276 RDGKTEDAVDVL-RAAKEKGLTPDAYSYDPL--ISAYCKDGRL--DLAIEFL-DYMISDG 329
           + G    A  VL R      +  D +    L      C    +  D    FL D++ S  
Sbjct: 157 QLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSR- 215

Query: 330 CLPDIVNYNTILAAFCKNGNADQAL-EIFE--------KLSDVGCPPNVSSYNTMFSALW 380
            L ++++   IL  + K     + L + FE        K+   G  P+  +  T      
Sbjct: 216 -LFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFC 274

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G   +AL    ++++ G   D+++Y +LI+ LC+ G    A+ LL   +    +P V+
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVV 334

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            YN II G CK + +N++ ++ +    K   P+  TY  LI G    G   +A++L N +
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 501 VSMHAI 506
            S + I
Sbjct: 395 TSKNII 400


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 236/481 (49%), Gaps = 23/481 (4%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
           T+  C++ K   R    +  + R       F +    +  LI    ++    E++     
Sbjct: 160 TIFKCLSVKGGLRQAPFALRKMRE----FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 215

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M+ +G +P +   + L+    + R     + +++ +E  G +P+V+ +   I    +A +
Sbjct: 216 MILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 275

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           I  A ++L R+   G  PDVVTY ++I +LC+   ++ A +VF ++     KP  +TY  
Sbjct: 276 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYI- 334

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
               T+L+  +D   + LD +            QF   +E  G  PDV+++ +L+  L  
Sbjct: 335 ----TLLDRFSDN--RDLDSVN-----------QFWSEMEKDGHVPDVVTFTILVDALCK 377

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G + E    +  M  +G+ PN+ TY+ LI  L R  + +DA+++    +  G+ P AY+
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y   I  Y K G    A+E  + M + G  P+IV  N  L +  K G   +A +IF  L 
Sbjct: 438 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 497

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D+G  P+  +YN M       G+   A+ ++SEM+    EPD I  NSLI+ L +   VD
Sbjct: 498 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVD 557

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  + + M+  + +PTV++YN ++ G  K  +I E+IE+   M +KGC PN  T+  L 
Sbjct: 558 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 617

Query: 482 E 482
           +
Sbjct: 618 D 618



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 244/544 (44%), Gaps = 92/544 (16%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
            + G+ DE++  +  MV N C+PDV++   LI   ++  + ++A ++ M + E   +P V 
Sbjct: 517  KVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 576

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN L++G  K  +I+ A ++ + +  +G  P+ +T+N +   LC    +  A K+  ++
Sbjct: 577  TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
            +   C P V TY  +I   +  GQ  +AM    +M                G+ K G++ 
Sbjct: 637  MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIE 696

Query: 212  QAFQFVRS-LESRGCQPDVISYNMLLRTLL------NMGKWEE----------------- 247
             A++ + + L S   QP  + +  L+ ++L      N   + E                 
Sbjct: 697  DAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 756

Query: 248  ------------GEKLMTEMISR--GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
                        G +++ E  ++  G++P + TY++LI  L      E A DV    K  
Sbjct: 757  IIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNT 816

Query: 294  GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            G  PD  +Y+ L+ AY K G++D   E    M +  C P+ + +N +++   K GN D A
Sbjct: 817  GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDA 876

Query: 354  L------------------------------------EIFEKLSDVGCPPNVSSYNTMFS 377
            L                                    ++FE +SD GC PN + YN + +
Sbjct: 877  LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILIN 936

Query: 378  ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                +G+   A  +   M+ +G+ PD  TY+ L+ CLC  G VDE +    +++ +   P
Sbjct: 937  GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNP 996

Query: 438  TVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             V+ YN+II G  K  R+ E++ +   M + +G  P+  TY  LI  +G  G   EA ++
Sbjct: 997  DVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1056

Query: 497  ANAL 500
             N +
Sbjct: 1057 YNEI 1060



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 208/434 (47%), Gaps = 54/434 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLI------------KKFFQERKS--NKAVRV 94
           RAGK +E+   ++ M   GC PDVV  T LI            K+ F + K+  +K  RV
Sbjct: 272 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRV 331

Query: 95  MEI---------------------LEKYGE-PDVFAYNALISGFCKANQIELANKVLDRL 132
             I                     +EK G  PDV  +  L+   CKA     A   LD +
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVM 391

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R +G  P++ TYN +I  L     ++ A ++FD +     KPT  TY + I      G +
Sbjct: 392 RDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDS 451

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
             A++  ++M                  + K G   +A Q    L+  G  PD ++YNM+
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 511

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           ++    +G+ +E  KL++EM+    EP+V+  + LI++L +  + ++A  +    KE  L
Sbjct: 512 MKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 571

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P   +Y+ L++   K+G++  AIE  + M+  GC P+ + +NT+    CKN     AL+
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 631

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+ D+GC P+V +YNT+   L  +G    A+    +M  K + PD +T  +L+  + 
Sbjct: 632 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVV 690

Query: 416 RDGMVDEAVGLLVD 429
           + G++++A  ++ +
Sbjct: 691 KAGLIEDAYKIIAN 704



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 22/379 (5%)

Query: 54   DESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YG-EPDVFAYN 110
            D ++ F E +VANG C+    +   +I+  F+   ++ A  + E   K  G +P +  YN
Sbjct: 732  DNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYN 791

Query: 111  ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             LI G  +A+ IE+A  V  ++++ G  PDV TYN ++ +    G I+  F+++ ++   
Sbjct: 792  LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851

Query: 171  NCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQ 212
             C+P  IT+ I+I   +  G  D A+ L  ++                  G+ K G + +
Sbjct: 852  ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911

Query: 213  AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            A Q    +   GC+P+   YN+L+      G+ +    L   M+  G+ P++ TYS+L+ 
Sbjct: 912  AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971

Query: 273  SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCL 331
             LC  G+ ++ +   R  KE GL PD   Y+ +I+   K  RL+ A+   + M  S G  
Sbjct: 972  CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGIT 1031

Query: 332  PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            PD+  YN+++      G  ++A +I+ ++   G  PNV ++N +      SG    A  +
Sbjct: 1032 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1091

Query: 392  ISEMLSKGIEPDEITYNSL 410
               M++ G  P+  TY  L
Sbjct: 1092 YQTMVTGGFSPNTGTYEQL 1110



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 228/513 (44%), Gaps = 61/513 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            + GK  E++   E MV  GC P+ +    L     +  +   A++++ ++++    PDVF
Sbjct: 587  KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 646

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN +I G  K  Q++ A     +++   + PD VT   ++  +   G+IE A+K+    
Sbjct: 647  TYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKAGLIEDAYKIIANF 705

Query: 168  LRDNC--KPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKG-------------- 208
            L  +C  +P  + +  L+ + + E   D A+   + +   G+C+ G              
Sbjct: 706  LY-SCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKH 764

Query: 209  -------------------------------------MVGQAFQFVRSLESRGCQPDVIS 231
                                                 M+  A      +++ GC PDV +
Sbjct: 765  NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVAT 824

Query: 232  YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AA 290
            YN LL      GK +E  ++  EM +   EPN +T++I+IS L + G  +DA+D+     
Sbjct: 825  YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884

Query: 291  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
             ++  +P A +Y PLI    K GRL  A +  + M   GC P+   YN ++  F K G A
Sbjct: 885  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944

Query: 351  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            D A  +F+++   G  P++ +Y+ +   L   G     L    E+   G+ PD + YN +
Sbjct: 945  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004

Query: 411  ISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
            I+ L +   ++EA+ L  +M+ +R   P + +YN +IL       + E+ ++   +   G
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1064

Query: 470  CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +PN  T+  LI G    G    A  +   +V+
Sbjct: 1065 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1097



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 236/545 (43%), Gaps = 64/545 (11%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  + E   N   L        ++  I    ++G    +L   E M   G  P++V C 
Sbjct: 415 RLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 474

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
             +    +  +  +A ++   L+  G  PD   YN ++  + K  +I+ A K+L  +   
Sbjct: 475 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVEN 534

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
              PDV+  N +I +L     ++ A+K+F ++     KPTV+TY  L+      G+  +A
Sbjct: 535 CCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 594

Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           ++L + M                  +CK   V  A + +  +   GC PDV +YN ++  
Sbjct: 595 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 654

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV----LRAAKEKG 294
           L+  G+ +E      +M  + + P+ VT   L+  + + G  EDA  +    L +  ++ 
Sbjct: 655 LVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQ- 712

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL----------------------- 331
             P    ++ L+ +   +  +D A+ F + ++++G                         
Sbjct: 713 --PANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGA 770

Query: 332 --------------PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                         P +  YN ++    +    + A ++F ++ + GC P+V++YN +  
Sbjct: 771 RMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLD 830

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FR 436
           A   SG       +  EM +   EP+ IT+N +IS L + G VD+A+ L  D+ S R F 
Sbjct: 831 AYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 890

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           PT  +Y  +I G  K+ R+ E+ ++   M + GC+PN   Y +LI G G  G    A  L
Sbjct: 891 PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACAL 950

Query: 497 ANALV 501
              +V
Sbjct: 951 FKRMV 955



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 18/353 (5%)

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           T N M+ +L   G IE    VFD                L+Q  +++  T+  + +   +
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFD----------------LMQKRIIKRDTNTYLTIFKCL 165

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +  KG + QA   +R +   G   +  SYN L+  LL      E  ++   MI  G  P
Sbjct: 166 SV--KGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRP 223

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TYS L+  L +    E  + +L+  +  GL P+ Y++   I    + G+++ A E L
Sbjct: 224 SLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 283

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M  +GC PD+V Y  ++ A C     D A E+F K+      P+  +Y T+      +
Sbjct: 284 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDN 343

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            D        SEM   G  PD +T+  L+  LC+ G   EA   L  M      P + +Y
Sbjct: 344 RDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTY 403

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           N +I G  +  R+++++E+   M   G KP   TY++ I+  G  G    A+E
Sbjct: 404 NTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 456



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 28/288 (9%)

Query: 20   SSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKL 78
            S+ E  PNT  ++ ++       +I    +AG  D++L  + + M      P       L
Sbjct: 849  SAHECEPNT--ITHNI-------VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899

Query: 79   IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
            I    +  +  +A ++ E +  YG  P+   YN LI+GF KA + + A  +  R+   G 
Sbjct: 900  IDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 959

Query: 138  SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
             PD+ TY++++  LC  G ++     F +L      P V+ Y ++I       + ++A+ 
Sbjct: 960  RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALV 1019

Query: 198  LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
            L +EM                  +SRG  PD+ +YN L+  L   G  EE  K+  E+  
Sbjct: 1020 LFNEMK-----------------KSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062

Query: 258  RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
             GLEPNV T++ LI      GK E A  V +     G +P+  +Y+ L
Sbjct: 1063 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N +L A   +G  ++   +F+ +       + ++Y T+F  L   G   +A   + +M  
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G   +  +YN LI  L +     EA+ +   M    FRP++ +Y+ +++G  K R I  
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + +L  M   G KPN  T+ + I  +G  G   EA E+
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 214/473 (45%), Gaps = 53/473 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G  DE+      M+  G  P       +IK   ++++   A+ +++++   G
Sbjct: 332 LIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG 391

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDVF Y  LI   CK  ++  A  + D+++  G  P +VTY+ ++   C +G ++ A K
Sbjct: 392 VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALK 451

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           ++ ++      P  +TYT L++  + +   D A  LL+EM                    
Sbjct: 452 LYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM------------------RQ 493

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G      +YN+L+  L  + +  E ++++   +S G  P  +TY+ +I+   + G    
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  + R  ++KG+TP+  +Y   I  YC+    DLA++ L Y+  DG  PDI  YN  + 
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYN----------------------------- 373
            FCK GN  +AL     L   G  P+V+ YN                             
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 374 ------TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
                 T+       G+   AL + SEM++  + PD+ T+ +L   LCR G +D A  LL
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            DM      P +++YN++I    +  ++ E+ ++   M   G  P++TTY +L
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 233/530 (43%), Gaps = 64/530 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +I+   R G   +++   + M   G KPD  +    I    + R +++A++V+  + + G
Sbjct: 191 VIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAG 250

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
            EP    Y++++    K  +++ A ++ D+ L + G   DVV   +++   C  G +  A
Sbjct: 251 FEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKA 310

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             +FD+++ D   PT +TY +LI+    EG TD+  KL                   R +
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKL------------------CRQM 352

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             +G  P    +N++++ LL   +W++   L+  ++  G+ P+V TY  LI  LC+  K 
Sbjct: 353 IEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKL 411

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +AV++    KE G+ P   +Y  L+  YC+ GR+D A++    M   G  P+ V Y T+
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471

Query: 341 LAAFCKNGNADQAL-----------------------------------EIFEKLSDVGC 365
           +  + K    D A                                    E+ ++    G 
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P   +YN++ +    +G    A GM  +M  KGI P+ +TY S I   CR    D AV 
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           LL+ +     +P + +YN  I  FCK   ++ ++  L  + + G  P+ T Y   + G  
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651

Query: 486 YGGWRAEAMELANALVSMHAISR--------DTFKRLNRTFPLLDVYKEI 527
                AEA +   +++    ++         D F ++      L++Y E+
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 202/440 (45%), Gaps = 20/440 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           MV  G  PD    T L+        +  A+ + + +   G   D   Y+ +I    +   
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A ++ D +   G  PD   Y I I  LC     + A +V  ++     +P  +TY+ 
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 182 LIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESR 223
           ++   +   + D+A++L D+M                  G C  G VG+A      + S 
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P  ++Y +L++     G  +E  KL  +MI +GL P+   ++++I  L RD + +DA
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L+   + G+ PD ++Y  LI   CK  +L  A+   D M   G  P IV Y+++L  
Sbjct: 381 IGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG 439

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +C+ G  D+AL+++ ++ D G PPN  +Y T+            A  +++EM   G+   
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           + TYN LI+ L     V E   +L    S  F PT ++YN II GF K   +  +  +  
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYR 559

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M +KG  PN  TY   I+G
Sbjct: 560 QMRKKGITPNIVTYTSFIDG 579



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 55/356 (15%)

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           + +++     P   + T L+  T L      A+ L DEM                    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEM------------------RGK 179

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC  D   Y++++R  +  G   +  +L  EM   G++P+   Y+I IS LC+    + A
Sbjct: 180 GCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRA 239

Query: 284 VDVLRAAKEKGLTPDAYSYDP------------------------------------LIS 307
           + VL   +E G  P   +Y                                      L+ 
Sbjct: 240 LQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMH 299

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            YC +G +  A++  D ++SDG  P  V Y  ++      G  D+  ++  ++ + G  P
Sbjct: 300 GYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLP 359

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +   +N +   L        A+G++  ++  G+ PD  TY  LI  LC+   + EAV L 
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             M+    +P++++Y+ ++LG+C+  R++E++++ + M +KG  PNE TY  L++G
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 43/284 (15%)

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           + M++RG+ P+  + + L+ +        DA+ +    + KG   DA  YD +I A  + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G    A+   D M   G  PD   Y   ++  CK  +AD+AL++  K+ + G  P   +Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 373 NTMFSA-----------------LWSSGDKI-------------------RALGMISEML 396
           +++                    L ++G K+                   +AL +  E++
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           S G+ P  +TY  LI     +GM DE   L   M      P+   +N++I G  + +R  
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++I +L  + + G  P+  TY  LI       W  +  +L  A+
Sbjct: 379 DAIGLLKLVVDTGV-PDVFTYGCLIH------WLCKHQKLHEAV 415



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 1/210 (0%)

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+ PDA S   L+           A+   D M   GC  D   Y+ ++ A  + G    
Sbjct: 144 RGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCD 203

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ +F++++  G  P+   Y    S L    D  RAL ++ +M   G EP E+TY+S++ 
Sbjct: 204 AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVD 263

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
            L +   +DEA+ L   M  +T  +  V+   +++ G+C    + +++++   +   G  
Sbjct: 264 VLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVT 323

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P   TY +LI+G    G   E  +L   ++
Sbjct: 324 PTNVTYGVLIKGCDAEGMTDETYKLCRQMI 353



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 1/179 (0%)

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M++ G +PD  +   +L       +A  AL +F+++   GC  +   Y+ +  A    G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+ +  EM   G++PDE  Y   IS LC+    D A+ +L  M    F P  ++Y+ 
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 445 IILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++    K RR++E++ +   M    G K +     +L+ G    G   +A++L + +VS
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVS 319



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 19/191 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    +L+F+  ++ +G  PDV +    +  +   +   +A +    ++++    D  
Sbjct: 617 KQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI GF K   +  A ++   + +    PD  T+  +   LC  G I+ A ++ D +
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R +  P ++TY +LI A + +G+  +A +L DEM                   S G  P
Sbjct: 737 RRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM------------------LSSGVVP 778

Query: 228 DVISYNMLLRT 238
           D  +Y++L RT
Sbjct: 779 DDTTYDILPRT 789


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 216/445 (48%), Gaps = 30/445 (6%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
           ++M  +G  P+V     L++   Q  +   A ++++ + + G  PD   Y  ++S  CK 
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 207

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           ++++ A +VL  +      P   +YN ++ +LC    ++  F V   ++    +P VITY
Sbjct: 208 DRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITY 262

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           T ++ A                   CK G +  A   +  +   GC P+V+++  L+R L
Sbjct: 263 TTIVDA------------------FCKAGELRMACAILARMVITGCTPNVVTFTALVRGL 304

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            + G+  +   +   M++ G  P+ V+Y+ILI  LC  G  + A  +L + ++ G  P+ 
Sbjct: 305 FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 364

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y  LI  + K G L  AI   + M   GC P++V Y  ++  FCK    +QA  + +K
Sbjct: 365 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 424

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +    CPPN  ++NT+  +L       RALG+  EM   G  P+  TYN LI  L R+G 
Sbjct: 425 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 484

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
             +A+ ++ +M+S     ++++YN ++ G C+TR   E++  +  M  +G +PN  T+  
Sbjct: 485 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSA 544

Query: 480 LIEG------IGYGGWRAEAMELAN 498
           +I        +    W   AM + N
Sbjct: 545 IIHAYCKEGEVRMAAWMLGAMNVVN 569



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 22/423 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
            ++ M   GC PD V    ++    +  + ++A  V+  +     P   +YNA++   C+
Sbjct: 181 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP----PVAASYNAIVLALCR 236

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             +++    V+  +  RG  P+V+TY  ++ + C  G +  A  +  +++   C P V+T
Sbjct: 237 EFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 296

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +T L++                  G+   G V  A    R + + G  P  +SYN+L+R 
Sbjct: 297 FTALVR------------------GLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 338

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L ++G  +    ++  M   G  PNV TYS LI    + G    A+ +       G  P+
Sbjct: 339 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 398

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
              Y  ++  +CK    + A   +D M+ + C P+ V +NT++ + C      +AL +F 
Sbjct: 399 VVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH 458

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++   GC PN  +YN +   L+  G+   AL M++EM S GIE   +TYN+++S LC+  
Sbjct: 459 EMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTR 518

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           M  EA+  +  M     +P   +++ II  +CK   +  +  +L AM    C  N   Y 
Sbjct: 519 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYT 578

Query: 479 LLI 481
           +L+
Sbjct: 579 ILM 581



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 24/390 (6%)

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           C  N +     V D +R  G  P+V TYN+++ +LC    + +A K+ D++ R  C P  
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           +TY  ++       + D+A ++L  M                        P   SYN ++
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAM-----------------------PPVAASYNAIV 231

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L    + +E   ++++M+ RGL+PNV+TY+ ++ + C+ G+   A  +L      G T
Sbjct: 232 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 291

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  ++  L+     DGR+  A++   +M+++G  P  V+YN ++   C  G+   A  I
Sbjct: 292 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 351

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
              +   GC PNV +Y+T+      +GD   A+ + ++M   G +P+ + Y +++   C+
Sbjct: 352 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 411

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
             M ++A  L+  M      P  +++N +I   C  RR+  ++ V   M   GC PN  T
Sbjct: 412 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 471

Query: 477 YVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           Y  LI G+   G   +A+ +   + S H I
Sbjct: 472 YNELIHGLFREGNCGDALHMVTEMQS-HGI 500



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 174/370 (47%), Gaps = 19/370 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+   +   +  MV  GC P+VV  T L++  F + + + A+ +   +   G  P   
Sbjct: 271 KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTV 330

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI G C    ++ A+ +L+ +   G  P+V TY+ +I      G +  A  +++ +
Sbjct: 331 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 390

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R  CKP V+ YT ++                     CKK M  QA   +  +    C P
Sbjct: 391 SRSGCKPNVVVYTNMVDV------------------FCKKLMFNQAKSLIDKMLLENCPP 432

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +++N L+R+L +  +      +  EM   G  PN  TY+ LI  L R+G   DA+ ++
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G+     +Y+ ++S  C+      A+ F+  MI  G  P+   ++ I+ A+CK 
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 552

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A  +   ++ V C  N+  Y  + + L +    + A+  + +ML +GI P+ +T+
Sbjct: 553 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 612

Query: 408 NSLISCLCRD 417
           N L+  + R+
Sbjct: 613 NVLVRGVFRN 622



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 19/306 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G    +   + SM  +GC P+V   + LI  F +      A+ +   + + G
Sbjct: 335 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y  ++  FCK      A  ++D++      P+ VT+N +I SLC    +  A 
Sbjct: 395 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRAL 454

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            VF ++ R  C P   TY  LI                   G+ ++G  G A   V  ++
Sbjct: 455 GVFHEMRRHGCVPNGRTYNELIH------------------GLFREGNCGDALHMVTEMQ 496

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S G +  +++YN ++  L       E    + +MI +G++PN  T+S +I + C++G+  
Sbjct: 497 SHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVR 556

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +L A        +   Y  L++  C   +L  A+ +L  M+ +G  P+ V +N ++
Sbjct: 557 MAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 616

Query: 342 AAFCKN 347
               +N
Sbjct: 617 RGVFRN 622



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 19/268 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    +AG    ++     M  +GCKP+VV+ T ++  F ++   N+A  +++ +L
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P+   +N LI   C   ++  A  V   +R  G  P+  TYN +I  L   G   
Sbjct: 427 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++     + +++TY  ++                   G+C+  M  +A  FV 
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVS------------------GLCQTRMSREAMVFVG 528

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G QP+  +++ ++      G+      ++  M       N++ Y+IL++ LC   
Sbjct: 529 KMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQD 588

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           K  DA+  L     +G+ P+  +++ L+
Sbjct: 589 KLVDAMTYLLKMLYEGIYPNTVTWNVLV 616


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 200/394 (50%), Gaps = 17/394 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C A +++L    L  +  +GF  + + +N ++  LC+    + A   
Sbjct: 88  PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V   +    C P V ++TI+++    E ++ +A++LL  M                + + 
Sbjct: 148 VLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMM----------------ADDG 191

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P+V+SY+ +   LL  G  ++      EM+ R + PNVVTYS +I++LC+    + 
Sbjct: 192 GGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDK 251

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++V     + G+TP+ ++Y  L+  +C  G+L  AI+FL+ M S+G  P++V Y++ + 
Sbjct: 252 AMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMD 311

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A +IF  +   G  P++++Y+++       G  +   G+   M+   ++P
Sbjct: 312 YLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQP 371

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N+LI    + G VDEA+ +   M     +P  ++YN +I G+CK  R+  ++ + 
Sbjct: 372 DHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALF 431

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M   G  PN  TY ++++G+   G    A E 
Sbjct: 432 QEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEF 465



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 22/356 (6%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            F V+   F  L+K      + D+++   +  M   GC P+V   T ++K    E +S +
Sbjct: 120 GFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQE 179

Query: 91  AVRVMEILEKYGE---PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           A+ ++ ++   G    P+V +Y+ +  G  K    + A      +  R   P+VVTY+ +
Sbjct: 180 ALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSI 239

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I +LC    ++ A +V D+++++   P   TYT L+                   G C  
Sbjct: 240 IAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVH------------------GFCSS 281

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G + +A +F+  + S G +P+V++Y+  +  L   G+  E  K+   M+ RGL+P++ TY
Sbjct: 282 GQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTY 341

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S L+     +G   +   +     +  + PD Y ++ LI A  K G++D A+     M  
Sbjct: 342 SSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRH 401

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            G  P+ V YNT++  +CK    + AL +F+++   G  PN  +YN M   L+ +G
Sbjct: 402 QGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTG 457



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 166/355 (46%), Gaps = 29/355 (8%)

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G  E A  VFD+LLR      + +    + A +       A+   + M      MV    
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGAL-ADVARDNPAAAVSRFNRMARAGASMV---- 86

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                       P V +Y +L+    + G+ + G   +  ++ +G     + ++ L+  L
Sbjct: 87  -----------TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL 135

Query: 275 CRDGKTEDAVD-VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CL 331
           C D +T+DA+D VLR   E G  P+ +S+  ++   C + R   A+E L  M  DG  CL
Sbjct: 136 CADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL 195

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P++V+Y+T+     K G+ D+A   + ++ D    PNV +Y+++ +AL       +A+ +
Sbjct: 196 PNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEV 255

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+  G+ P+  TY SL+   C  G + EA+  L  M S    P V++Y+  +   CK
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             R  E+ ++  +M ++G KP+ TTY  L+ G    G          ALV MH +
Sbjct: 316 NGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEG----------ALVEMHGL 360



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 149/313 (47%), Gaps = 21/313 (6%)

Query: 55  ESLYFIESMV--ANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNA 111
           E+L  +  M     GC P+VV  + +     +    +KA     E+L++   P+V  Y++
Sbjct: 179 EALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSS 238

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  CK   ++ A +V DR+   G +P+  TY  ++   CS G +  A K  +++  + 
Sbjct: 239 IIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNG 298

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+TY+  +                    +CK G   +A +   S+  RG +PD+ +
Sbjct: 299 VEPNVVTYSSFMDY------------------LCKNGRCTEARKIFYSMVKRGLKPDITT 340

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ LL      G   E   L   M+   ++P+   ++ LI +  + GK ++A+ V    +
Sbjct: 341 YSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMR 400

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            +GL P+  +Y+ LI+ YCK  R++ A+     M+S+G  P+ + YN +L    + G   
Sbjct: 401 HQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTG 460

Query: 352 QALEIFEKLSDVG 364
            A E + ++   G
Sbjct: 461 TAKEFYVQIIKSG 473



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     +G+  E++ F+E M +NG +P+VV  +  +    +  +  +A ++   + 
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMV 330

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD+  Y++L+ G+     +   + + D +      PD   +N +I +   +G ++
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VF ++     KP  +TY  LI                   G CK   +  A    +
Sbjct: 391 EAMLVFSKMRHQGLKPNCVTYNTLIN------------------GYCKITRMENALALFQ 432

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            + S G  P+ I+YN++L+ L   G+    ++   ++I  G
Sbjct: 433 EMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 23/448 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  LI+    AG+ DE+L     M     +PD+     L+K      +  + +
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGL 250

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +++ +++ G  P   AY AL+  +C+  + E A K+L+ +   G  P VVT  I++ + 
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G +  A +VF+ +    C+P V TY  ++Q     G+  KAM LLD+M  C      
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMREC------ 364

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                       G +PDV++YN+L+R     G      +L+  M   GL  +  TY++LI
Sbjct: 365 ------------GVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +LC+ GK ++A  +    + +G+ P++ +++ +I+  CK G+ D+A  FL+ MIS G  
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD   Y+  +   CK   + + L   +++      P+  +Y  + + L++  +   A  +
Sbjct: 473 PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRI 532

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +M+S+G  PD +TY + +   C +G +DEA  ++ +M+  R     ++YN +I G   
Sbjct: 533 WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTS 592

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVL 479
             + + ++ +L  M      PN  T+ +
Sbjct: 593 IGQTDRAVTILKHMTGVASMPNHFTFFI 620



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 202/405 (49%), Gaps = 23/405 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+   +      A R + ++ + G  PD F +N+LI G+C+  Q+E+A+ +  ++  RG
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           FS D V+Y  +I   C  G I+ A ++F    R+  +P + T+  L++            
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELF----REMTQPDMYTHAALVK------------ 238

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C  G   +    ++ ++  G +P   +Y  L+       K EE EK++ EM 
Sbjct: 239 ------GLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMF 292

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             GL P VVT +I++++ CR+G+   AV V  + + KG  P+ ++Y+ ++  +C  G++ 
Sbjct: 293 DSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVY 352

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A+  LD M   G  PD+V YN ++   C +G+   A  +   +   G   +  +YN + 
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            AL  +G    A  +   +  +GI P+ +T+N++I+ LC+ G  D A   L +M S  + 
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           P   +Y+  I   CKT+   E +  +  M +K  KP+   Y ++I
Sbjct: 473 PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVI 517



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 22/381 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YNALI   C+   +  A + L  +   G+ PD  T+N +I   C    +E A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++         ++Y  LI+                  G C+ G + +A +  R +   
Sbjct: 187 FCKMPFRGFSQDAVSYAALIE------------------GFCEAGRIDEALELFREMT-- 226

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
             QPD+ ++  L++ L + G+ EEG  ++ +M   G  P    Y+ L+   CR+ K E+A
Sbjct: 227 --QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEA 284

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L    + GL P   +   +++AYC++GR+  A+   + M   GC P++  YN I+  
Sbjct: 285 EKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG 344

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC  G   +A+ + +++ + G  P+V +YN +       G    A  ++  M   G+  D
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           + TYN LI  LC+ G VDEA  L   +E    RP  +++N +I G CK  + + +   L 
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
            M   G  P+  TY   IE +
Sbjct: 465 NMISAGYAPDTYTYSPFIENL 485



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 235/550 (42%), Gaps = 70/550 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    R  K +E+   +  M  +G  P VV CT ++  + +E + + AVRV E + 
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMR 327

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V+ YNA++ GFC A ++  A  +LD++R  G  PDVVTYN++I   C  G I 
Sbjct: 328 FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIG 387

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           SAF++   +  +       TY +LI A    G+ D+A  L D +                
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G    A  F+ ++ S G  PD  +Y+  +  L      +EG   + EM+ + ++
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVK 507

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ V Y+I+I+ L  +     A  +      +G +PD  +Y   + AYC +GRLD A   
Sbjct: 508 PSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENV 567

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN------------- 368
           +  M     + D + YNT++      G  D+A+ I + ++ V   PN             
Sbjct: 568 VTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQ 627

Query: 369 -----------------------------------VSSYNTMFSALWSSGDKIR---ALG 390
                                               SS  T  S L    ++ R      
Sbjct: 628 RRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTS 687

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++S M  + +  +E  YN+L++C C+  M  +A  LL  M    F P +I Y  ++ G  
Sbjct: 688 LVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLT 747

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD- 509
              + + + E+  +   K    +E  + ++I+G    G      ++ + L  M     D 
Sbjct: 748 AEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDE 807

Query: 510 TFKRLNRTFP 519
           T+  L    P
Sbjct: 808 TYAMLTEELP 817



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 23/381 (6%)

Query: 109 YNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           + +L++ F +     L  ++   + R    +P   TYN +I +LC R  +  A +    +
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +R   +P   T+  LI                  +G C+   +  A      +  RG   
Sbjct: 156 VRSGWRPDAFTFNSLI------------------LGYCRTQQLEVAHDLFCKMPFRGFSQ 197

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D +SY  L+      G+ +E  +L  EM     +P++ T++ L+  LC  G+ E+ + +L
Sbjct: 198 DAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCML 253

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  KE G  P   +Y  L+  +C++ + + A + L+ M   G +P +V    ++ A+C+ 
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCRE 313

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A+ +FE +   GC PNV +YN +     ++G   +A+ ++ +M   G+EPD +TY
Sbjct: 314 GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI   C DG +  A  LL  ME         +YN++I   CKT +++E+  +   +  
Sbjct: 374 NLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 468 KGCKPNETTYVLLIEGIGYGG 488
           +G +PN  T+  +I G+   G
Sbjct: 434 RGIRPNSVTFNTVINGLCKAG 454



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-----PDEI 405
           D +L +  +L  +  PP    ++  F +L +   +     ++  + +         P   
Sbjct: 71  DISLPVVLRLHALSPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGA 130

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN+LI  LCR   +  A   L  M  + +RP   ++N +ILG+C+T+++  + ++   M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +G   +  +Y  LIEG    G   EA+EL
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALEL 221


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 237/495 (47%), Gaps = 53/495 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +++    RAG+  ++L  +  M   G +P++++C   I  F +  +  KA+R +E ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+V  YN +I G+C  +++E A ++L+ + S+G  PD V+Y  ++G LC    I 
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364

Query: 159 SAFKVFDQLLRDN-CKPTVITYTILIQ--------------------------------- 184
               +  ++ +++   P  +TY  LI                                  
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424

Query: 185 --ATMLEGQTDKAMKLLDEM--------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
             A   EG+  +A  L++EM              G C+ G V +A + ++ + + G +P+
Sbjct: 425 VHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 484

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            +SY  LL  +   GK  E  ++M         PN +TYS+++  L R+GK  +A DV+R
Sbjct: 485 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 544

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               KG  P     + L+ + C+DGR   A +F++  ++ GC  ++VN+ T++  FC+N 
Sbjct: 545 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 604

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D AL + + +  +    +V +Y T+   L   G    A  ++ +ML KGI+P  +TY 
Sbjct: 605 ELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYR 664

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++I   C+ G VD+ V +L  M S +   T+  YN +I   C   ++ E+  +L  +   
Sbjct: 665 TVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRT 722

Query: 469 GCKPNETTYVLLIEG 483
             + +  T   L+EG
Sbjct: 723 ASRSDAKTCYALMEG 737



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 189/396 (47%), Gaps = 27/396 (6%)

Query: 93  RVMEILEK---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           RV+ ++++   Y  P+  A++ ++  + +A Q+  A KVL  ++  G  P+++  N  I 
Sbjct: 228 RVLVLMKRRGIYRTPE--AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
                  +E A +  +++      P V+TY  +I+                  G C    
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR------------------GYCDLHR 327

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYS 268
           V +A + +  + S+GC PD +SY  ++  L    +  E   LM +M    GL P+ VTY+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI  L +    ++A+  L+ A+EKG   D   Y  ++ A CK+GR+  A + ++ M   
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM--- 444

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C PD+V Y  ++  FC+ G  D+A ++ + +   G  PN  SY  + + +  +G  + A
Sbjct: 445 DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 504

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             M++        P+ ITY+ ++  L R+G + EA  ++ +M    F P  +  N+++  
Sbjct: 505 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 564

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            C+  R +E+ + +     KGC  N   +  +I G 
Sbjct: 565 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 600



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 147/280 (52%), Gaps = 4/280 (1%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++ RG      +++ ++ +    G+  +  K++T M   G+EPN++  +  I    R  +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E A+  L   +  G+ P+  +Y+ +I  YC   R++ AIE L+ M S GCLPD V+Y T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352

Query: 340 ILAAFCKNGNADQALEIFEKLS-DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           I+   CK     +  ++ +K++ + G  P+  +YNT+   L        AL  + +   K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G   D++ Y++++  LC++G + EA  L+ +M+     P V++Y  ++ GFC+   ++++
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCP---PDVVTYTAVVNGFCRLGEVDKA 469

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
            ++L  M   G KPN  +Y  L+ G+   G   EA E+ N
Sbjct: 470 KKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 509



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 149/297 (50%), Gaps = 4/297 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A + +  ++  G +P+++  N  +   +   + E+  + +  M   G+ PNVV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ +I   C   + E+A+++L     KG  PD  SY  ++   CK+ R+    + +  M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 326 ISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
             + G +PD V YNT++    K+ +AD+AL   +   + G   +   Y+ +  AL   G 
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I+EM      PD +TY ++++  CR G VD+A  LL  M +   +P  +SY  
Sbjct: 434 MSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 490

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           ++ G C+T +  E+ E++    E    PN  TY +++ G+   G  +EA ++   +V
Sbjct: 491 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 547



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/411 (21%), Positives = 184/411 (44%), Gaps = 21/411 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +  +  LI    +    DE+L+F++     G + D +  + ++    +E + ++A  +  
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL-- 440

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           I E    PDV  Y A+++GFC+  +++ A K+L  + + G  P+ V+Y  ++  +C  G 
Sbjct: 441 INEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 500

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              A ++ +        P  ITY++++     EG+  +A  ++ EM              
Sbjct: 501 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 560

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C+ G   +A +F+    ++GC  +V+++  ++       + +    ++ +M    
Sbjct: 561 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 620

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
              +V TY+ L+ +L + G+  +A ++++    KG+ P   +Y  +I  YC+ G++D  +
Sbjct: 621 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 680

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L+ MIS      I  YN ++   C  G  ++A  +  K+       +  +   +    
Sbjct: 681 AILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 738

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
              G  + A  +   M ++ + PD      L   L   G VDEA  L++ +
Sbjct: 739 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRL 789



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 20/334 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           R G+ D++   ++ M  +G KP+ V  T L+    +  KS +A  +M + E+ +  P+  
Sbjct: 462 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 521

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ ++ G  +  ++  A  V+  +  +GF P  V  N+++ SLC  G    A K  ++ 
Sbjct: 522 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 581

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C   V+ +T +I       + D A+ +LD+M                  + KKG +
Sbjct: 582 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 641

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + ++ +  +G  P  ++Y  ++     MGK ++   ++ +MISR  +     Y+ +
Sbjct: 642 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQV 699

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC  GK E+A  +L          DA +   L+  Y K G    A +    M +   
Sbjct: 700 IEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNL 759

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +PD+     +       G  D+A ++  +L + G
Sbjct: 760 IPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 793



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 26/238 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME---ILE 99
           L++   R G+  E+  F+E  +  GC  +VV  T +I  F Q  + + A+ V++   ++ 
Sbjct: 561 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 620

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K+   DVF Y  L+    K  +I  A +++ ++  +G  P  VTY  +I   C  G ++ 
Sbjct: 621 KHA--DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 678

Query: 160 AFKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              + ++++ R  C+     Y  +I+   + G+ ++A  LL ++                
Sbjct: 679 LVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 735

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            G  KKG+   A++    + +R   PDV     L + L+  GK +E +KLM  ++ RG
Sbjct: 736 EGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 793


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 220/449 (48%), Gaps = 19/449 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF  L+    RAGK   ++  ++ M  +GC PD+ +C   +       + +KA+   + +
Sbjct: 163 QFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRM 222

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G EPDV  YN LI G C   ++  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 223 RRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRV 282

Query: 158 ESAFKVFDQLLRDNCKPT-VITYTILIQATMLEGQTDKAMKLL----------DEMG--- 203
                +   +  D    T  +TY +LI      G  D+A++ L          DE+G   
Sbjct: 283 SEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSA 342

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C  G + +A + V  + S+ C PDV++Y+ ++     +G+ ++  K+M  M   G
Sbjct: 343 VVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNG 402

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN+VT++ L++ LC+ GK+ +A ++L  + E   TP   +Y  ++  + ++G+L  + 
Sbjct: 403 CKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESC 462

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N ++ A CK G   +A E  E+    GC  NV ++ T+    
Sbjct: 463 DVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGF 522

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   AL ++ ++      PD +TY  +++ L R G + EA GL+  M +    PT+
Sbjct: 523 SRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTL 582

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++Y  +I  +C+   + E +++L  M  +
Sbjct: 583 VTYRTVIHRYCEKGTVEELVDLLDKMLAR 611



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 180/372 (48%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V E  +  ++      G+  E+   +  M++  C PDVV  + ++  F +  + ++A 
Sbjct: 333 FRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQAR 392

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K G +P++  + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 393 KMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGF 452

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G ++ +  V  Q+L+    PT +   +LI A                  +CK+G   
Sbjct: 453 RREGKLKESCDVVAQMLQKGFFPTTVEINLLIHA------------------LCKEGKPA 494

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +F+   +S+GC  +V+++  ++      G  E    L+ ++      P+VVTY++++
Sbjct: 495 EAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVV 554

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           ++L R G+ ++A  ++     +GL P   +Y  +I  YC+ G ++  ++ LD M++   L
Sbjct: 555 NALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQEL 614

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
             +  YN ++   C  G  ++A  +  K+       +  + + +  +  + G  I+A  +
Sbjct: 615 KSV--YNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNV 672

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 673 ACRMFQRNLIPD 684



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 123/300 (41%), Gaps = 71/300 (23%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++  L R    + A  V+R    +G+      +  L+ +Y + G+L  A+  L  M +DG
Sbjct: 132 MLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDG 191

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PDI   N  +      G  D+AL   +++  VG  P+V +YN +   L S    + AL
Sbjct: 192 CAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEAL 251

Query: 390 GMISEMLSKGIEPDEI------------------------------------TYNSLISC 413
            MI  ML  G  PD+I                                    TYN LI  
Sbjct: 252 EMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHV 311

Query: 414 LCRDGMVDEAVGLLVDMESTRFR-----------------------------------PT 438
           L + G  DEA+  L + E  RFR                                   P 
Sbjct: 312 LAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPD 371

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V++Y+ ++ GFC+   I+++ +++  M++ GCKPN  T+  L+ G+   G  +EA EL N
Sbjct: 372 VVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLN 431



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 5/262 (1%)

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           R L   G W    +     + R L P  V   +   +    G    A +  R A  +   
Sbjct: 66  RLLEQRGSWTPKLEAQLRHLLRVLSPPQVRAVLRAQA---QGDARAAFEFFRWADRQWQY 122

Query: 297 PDAYS-YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             A   +D ++    +    D A   +  MI  G       +  ++ ++ + G    A+ 
Sbjct: 123 RHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMR 182

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + + +   GC P++S  N   + L  +G   +ALG    M   G+EPD +TYN LI  LC
Sbjct: 183 VLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLC 242

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKPNE 474
               V EA+ ++  M      P  ISY  ++   CK +R++E   +LA M  + G   ++
Sbjct: 243 SVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQ 302

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY +LI  +   G   EA+E 
Sbjct: 303 VTYNMLIHVLAKHGHADEALEF 324


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 205/394 (52%), Gaps = 17/394 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  Y  LI   C A +++L    L  +  +GF  + + +N ++  LC+    + A  +
Sbjct: 88  PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147

Query: 164 FDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
             + + + +C P V ++TI+++    E ++ +A++LL  M                + + 
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMM----------------ADDG 191

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC P+V+SY+ ++  LL  G  ++      EM+ R + PNVV YS +I++LC+    + 
Sbjct: 192 GGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDK 251

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A++V     + G+TP+ ++Y  L+  +C  G+L  AI+FL+ M S+G  P++V Y++ + 
Sbjct: 252 AMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMD 311

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CKNG   +A +IF+ +   G  P++++Y+++       G  +   G+   M+   ++P
Sbjct: 312 YLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQP 371

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D   +N+LI    + G VDEA+ +   M     +P  ++Y+ +I G+CK  R+  ++ + 
Sbjct: 372 DHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALF 431

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M   G  PN  TY ++++G+   G  A A E 
Sbjct: 432 QEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEF 465



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 29/355 (8%)

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G  E A  VFD+LLR      + +    + A +       A+   + M      MV    
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGAL-ADVARDNPAAAVSRFNRMARAGASMV---- 86

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                       P V +Y +L+    + G+ + G   +  ++ +G     + ++ L+  L
Sbjct: 87  -----------TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL 135

Query: 275 CRDGKTEDAVD-VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CL 331
           C D +T+DA+D VLR   E    P+ +S+  ++   C + R   A+E L  M  DG  CL
Sbjct: 136 CADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL 195

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P++V+Y+T++    K G+ D+A   + ++ D    PNV  Y+++ +AL       +A+ +
Sbjct: 196 PNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEV 255

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+  G+ P+  TY SL+   C  G + EA+  L  M S    P V++Y+  +   CK
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             R  E+ ++  +M ++G KP+ TTY  L+ G    G          ALV MH +
Sbjct: 316 NGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEG----------ALVEMHGL 360



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 21/313 (6%)

Query: 55  ESLYFIESMV--ANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNA 111
           E+L  +  M     GC P+VV  + +I    +    +KA     E+L++   P+V  Y++
Sbjct: 179 EALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSS 238

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  CK   ++ A +V DR+   G +P+  TY  ++   CS G +  A K  +++  + 
Sbjct: 239 IIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNG 298

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            +P V+TY+  +                    +CK G   +A +   S+  RG +PD+ +
Sbjct: 299 VEPNVVTYSSFMDY------------------LCKNGRCTEARKIFDSMVKRGLKPDITT 340

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ LL      G   E   L   M+   ++P+   ++ LI +  + GK ++A+ V    +
Sbjct: 341 YSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMR 400

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++GL P+  +Y  LI+ YCK  R++ A+     M+S+G  P+ + YN +L    + G   
Sbjct: 401 QQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTA 460

Query: 352 QALEIFEKLSDVG 364
            A E + ++   G
Sbjct: 461 TAKEFYVQIIKSG 473



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 19/221 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     +G+  E++ F+E M +NG +P+VV  +  +    +  +  +A ++ + + 
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G +PD+  Y++L+ G+     +   + + D +      PD   +N +I +   +G ++
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VF ++ +   KP  +TY+ LI                   G CK   +  A    +
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLIN------------------GYCKITRMENALALFQ 432

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            + S G  P+ I+YN++L+ L   G+    ++   ++I  G
Sbjct: 433 EMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           T +  L+      G   E     + MV +  +PD  +   LI    ++ K ++A+ V   
Sbjct: 339 TTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSK 398

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + + G +P+   Y+ LI+G+CK  ++E A  +   + S G SP+ +TYNIM+  L   G 
Sbjct: 399 MRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGR 458

Query: 157 IESAFKVFDQLLRDNCK 173
             +A + + Q+++   K
Sbjct: 459 TATAKEFYVQIIKSGKK 475


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 224/451 (49%), Gaps = 35/451 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           RAG+ D     + ++V  G + D +  T L+K    +++++ A+ +  +L +  E    P
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI--VLRRMTELGCIP 161

Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGM----- 156
           DVF+YN L+ G C  N+ + A ++L  +   R  G  PDVV+YN ++      G+     
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221

Query: 157 ---IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
              ++ A +V + ++++   P  +TY  ++                   G C  G   +A
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILH------------------GYCSSGQPKEA 263

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              ++ + S G +P+V++Y+ L+  L   G+  E  K+   M  RGLEP++ TY  L+  
Sbjct: 264 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 323

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C++G+  ++  +       G+ PD  +Y+ LI   C  G++D A + L  M+S G  PD
Sbjct: 324 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 383

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           IV Y T++  +C+    D AL +F+++   G  PN+ +YN +   L+ +     A  +  
Sbjct: 384 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 443

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            +   G + +  TYN ++  LC++ + DEA+ +  ++  T  +    ++NI+I    K  
Sbjct: 444 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 503

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           R++E+ ++ AA    G  P+  TY L+ E +
Sbjct: 504 RMDEAKDLFAAHSANGLVPDVRTYSLMAENL 534



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 202/402 (50%), Gaps = 24/402 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           P V  Y  LI   C+A +++L    L  +  +GF  D +T+  ++  LC+      A   
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++    C P V +Y  L++    E ++ +A++LL  M   + G              
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG-------------- 195

Query: 223 RGCQPDVISYNMLL--------RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            G  PDV+SYN +L        +T L     ++  +++  M+  G+ P+ +TY+ ++   
Sbjct: 196 -GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 254

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C  G+ ++A+  L+  +  G+ P+  +Y  L++  CK+GR   A +  D M   G  PDI
Sbjct: 255 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 314

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             Y T+L   CK G   ++ ++F+ +  +G  P++ +YNT+      +G    A  +++ 
Sbjct: 315 ATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 374

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+S G++PD +TY +LI+  CR   +D+A+ L  +M S+   P +I+YNII+ G   TRR
Sbjct: 375 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 434

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              + E+  ++ + G +   +TY +++ G+       EA+ +
Sbjct: 435 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 476



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 185/386 (47%), Gaps = 27/386 (6%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQE--------RKSNKAVRVMEILEKYG-EPD 105
           E L+ +      G  PDVV    ++  FF+E        +  +KA+ V+  + K G  PD
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPD 243

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              YN+++ G+C + Q + A   L ++RS G  P+VVTY+ ++  LC  G    A K+FD
Sbjct: 244 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 303

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            + +   +P + TY  L+Q    EG+  ++ KL D M              VR     G 
Sbjct: 304 SMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM--------------VRI----GV 345

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +PD+I+YN L+      GK +E  KL+  M+S G++P++VTY  LI+  CR  + +DA+ 
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           + +     G++P+  +Y+ ++       R   A E    +   G   ++  YN IL   C
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           KN   D+AL +F+ L          ++N M  AL   G    A  + +   + G+ PD  
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 525

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDME 431
           TY+ +   L   G ++E   L + ME
Sbjct: 526 TYSLMAENLIEQGSLEELDDLFLSME 551



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 12/289 (4%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
           P V +Y +L+      G+ + G   +  ++ +G   + +T++ L+  LC D +T DA+D 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
           VLR   E G  PD +SY+ L+   C + R   A+E L  M  D   G  PD+V+YNT+L 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 343 AFCKNG--------NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            F K G          D+A+E+   +   G  P+  +YN++     SSG    A+G + +
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M S G+EP+ +TY+SL++ LC++G   EA  +   M      P + +Y  ++ G CK  R
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + ES ++   M   G KP+  TY  LI+G    G   EA +L  ++VS+
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 378



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 186/401 (46%), Gaps = 27/401 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F + I+    A   D+++  + +MV NG  PD +    ++  +    +  +A+  ++ + 
Sbjct: 212 FKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 271

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP+V  Y++L++  CK  +   A K+ D +  RG  PD+ TY  ++   C  G + 
Sbjct: 272 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVI 331

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            + K+FD ++R   KP +ITY  LI    L G+ D+A KLL                   
Sbjct: 332 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL------------------A 373

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
           S+ S G +PD+++Y  L+     + + ++   L  EM+S G+ PN++TY+I++  L    
Sbjct: 374 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 433

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV--- 335
           +T  A ++  +  + G   +  +Y+ ++   CK+   D A+     M  + CL D+    
Sbjct: 434 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR----MFQNLCLTDLQLET 489

Query: 336 -NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             +N ++ A  K G  D+A ++F   S  G  P+V +Y+ M   L   G       +   
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 549

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
           M   G   D    NS++  L + G +  A   L  ++   F
Sbjct: 550 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 590



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 34/395 (8%)

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC---KPTVITY 179
           E A  V D L  RG    +   N  +  + +R    +A   ++++ R       PTV TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADV-ARHSPAAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            ILI                     C+ G +   F  + ++  +G + D I++  LL+ L
Sbjct: 96  AILIGCC------------------CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGL 137

Query: 240 LNMGKWEEG-EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK---GL 295
               +  +  + ++  M   G  P+V +Y+ L+  LC + ++++A+++L    +    G 
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197

Query: 296 TPDAYSYDPLISAYCKDG--------RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            PD  SY+ +++ + K+G         +D A+E L+ M+ +G +PD + YN+IL  +C +
Sbjct: 198 PPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 257

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A+   +K+   G  PNV +Y+++ + L  +G    A  +   M  +G+EPD  TY
Sbjct: 258 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 317

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L+   C++G V E+  L   M     +P +I+YN +I G C   +++E+ ++LA+M  
Sbjct: 318 RTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 377

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            G KP+  TY  LI G        +A+ L   +VS
Sbjct: 378 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 412


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 230/500 (46%), Gaps = 54/500 (10%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G+ ++ +  IES    GC P++V    LI  + ++ +   A ++ + L+  G  P +  +
Sbjct: 222 GRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTF 281

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFS------------------------------- 138
            +L++GFCK    E  + +L  ++ RG S                               
Sbjct: 282 GSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSE 341

Query: 139 ----PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               PD+VTYN +I   CSRG +E A K+ +Q +R    P  +TYT L+           
Sbjct: 342 NCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVH---------- 391

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK+G   +A  ++  + + G + D+ISY  L+  L+  G+ +    +   
Sbjct: 392 --------GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M++RG+ P+   Y++L++ L + GK   A  +L    ++ + PDA+ Y  L+  + + G 
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A +    +I  G  P +V YN ++  F K+G  D A+   +K+      P++ +++T
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +        +    L +   M+ +  +P+ +TY SLI+  CR G    A  L   M S  
Sbjct: 564 IIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            +P+V++Y+I+I  FCK  ++ +++     M    C PN+  +  L+ G       A + 
Sbjct: 624 LKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSR 683

Query: 495 ELANALVSMHAISRDTFKRL 514
           E  N   +  ++  D F R+
Sbjct: 684 EPNNLHENSRSMFEDFFSRM 703



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 218/477 (45%), Gaps = 27/477 (5%)

Query: 50  AGKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDV- 106
            G  D++L     +V  +   P    C  L+    + R+   A ++  E++++    D+ 
Sbjct: 146 VGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDIC 205

Query: 107 ---FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
              +  + ++ G C   +IE   K+++    +G  P++V YN +I   C +G +ESA+K+
Sbjct: 206 VDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKL 265

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMC--------------K 206
           F +L      PT+ T+  L+      G  +    LL EM   G+               K
Sbjct: 266 FKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYK 325

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G   +A   ++ +    C+PD+++YN L+    + G+ EE EKL+ + I RGL PN +T
Sbjct: 326 LGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLT 385

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ L+   C+ G+   A D L      GL  D  SY  LI      G +D A+   D M+
Sbjct: 386 YTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMM 445

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G LPD   YN ++    K G    A  +  ++ D    P+   Y T+       G+  
Sbjct: 446 NRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLD 505

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +   ++ KG++P  + YN +I    + GM+D A+  +  M      P + +++ II
Sbjct: 506 EAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTII 565

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            G+ K   +N  +++   M ++ CKPN  TY  LI G      R    ++A  L SM
Sbjct: 566 DGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGY----CRKGETKMAEKLFSM 618



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 33/422 (7%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
             +V    +  LI     AG+ D +L   + M+  G  PD  +   L+   F++ K + A
Sbjct: 413 GLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMA 472

Query: 92  -VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            V + E+L++   PD F Y  L+ GF +   ++ A K+   +  +G  P VV YN+MI  
Sbjct: 473 KVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKG 532

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
               GM+++A    D++ R +  P + T++ +I   + +   +  +K+    G+    MV
Sbjct: 533 FSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIF---GL----MV 585

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            Q            C+P+V++Y  L+      G+ +  EKL + M S GL+P+VVTYSIL
Sbjct: 586 KQ-----------NCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE---------- 320
           I S C++ K   AV           TP+  ++  L++ +       ++ E          
Sbjct: 635 IGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRS 694

Query: 321 ----FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
               F   MI DG       YN IL   C+      AL++  K+   G   +  S+  + 
Sbjct: 695 MFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALI 754

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             +   G+      MIS  L++G     + Y+  +     +G + EA G+L  M      
Sbjct: 755 HGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVS 814

Query: 437 PT 438
           P 
Sbjct: 815 PN 816



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 96/272 (35%), Gaps = 75/272 (27%)

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE-------------------------- 320
           L   K K   P   +   ++ AY   G +D A+E                          
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 321 ----------FLDYMISDGCLPDIV--NYNT--ILAAFCKNGNADQALEIFEKLSDVGCP 366
                       D MI      DI   NY T  ++   C  G  +  +++ E     GC 
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           PN+  YNT+       G+   A  +  ++  KG  P   T+ SL++  C+ GM +    L
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 427 LVDME---------------STRFR--------------------PTVISYNIIILGFCK 451
           L++M+                 R++                    P +++YN +I  FC 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
              + E+ ++L     +G  PN+ TY  L+ G
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHG 392


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 243/497 (48%), Gaps = 45/497 (9%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           +G+F+++    + M   GC+P+      L++ + +   S +A+ +++ +  +G +P+   
Sbjct: 164 SGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVI 223

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LIS FC+  + E A ++++R+R  G  PDVVT+N  I +LCS G I  A ++F  + 
Sbjct: 224 YNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQ 283

Query: 169 RDN----CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
            D      +P + T+ ++++    EG  ++A  L++ M                 G+ + 
Sbjct: 284 IDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN 343

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G + +A   ++ +  +G +P++ S+N ++  L   G   +   +M  MIS G+ P+ VTY
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S L+   C  GK   A ++L     +G +P+ Y+ + L+ +  K+GR+  A + L  M  
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNE 463

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFE--------KLSDVG--------------- 364
                D V  N ++   CK+G  D+A+EI E         L ++G               
Sbjct: 464 RSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKK 523

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C P++ +Y+ + + L  +G    A     EM+ K + PD I Y++ I   C+ G +  A 
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF 583

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +L DME      ++ +YN +ILG     +I E   +L  M EKG  PN  TY  +I  +
Sbjct: 584 RVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCL 643

Query: 485 GYGGWRAEAMELANALV 501
             GG   +A  L + ++
Sbjct: 644 CEGGRIKDATSLLDEML 660



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 247/555 (44%), Gaps = 90/555 (16%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPN         E  F  L++   RAG    +L  ++ M + G +P+ V+   LI  F +
Sbjct: 183 RPN---------EFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 85  ERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLR---SRGFS-P 139
           E ++ +A R++E + + G  PDV  +N+ IS  C A +I  A+++   ++     G   P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           ++ T+N+M+   C  GM+E A  + + + R+     + +Y I +   +  G+  +A   L
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 200 DEM-----------------GMCKKGMVG------------------------------- 211
            EM                 G+CK G++                                
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 212 ----QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
               +A   +  +  RGC P+  + N+LL +L   G+  E EKL+ +M  R  + + VT 
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 268 SILISSLCRDGKTEDAVDVLR-----------------------AAKEKGLTPDAYSYDP 304
           +I+I  LC+ GK ++AV+++                        ++  K   PD  +Y  
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +I+  CK GRLD A +    M+     PD + Y+T + +FCK+G    A  + + +   G
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  ++ +YN++   L S        G++ +M  KGI P+  TYN++ISCLC  G + +A 
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDAT 653

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            LL +M      P + S+ ++I  FCK        EV        C   E  Y L+   +
Sbjct: 654 SLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI-CGHKEALYSLMFNEL 712

Query: 485 GYGGWRAEAMELANA 499
             GG  +EA EL +A
Sbjct: 713 LIGGEVSEAKELFDA 727



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 212/468 (45%), Gaps = 46/468 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +++ S R  K D   +  + MV  G  P+      LI       +   A  V + +   G
Sbjct: 122 VLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKG 181

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+ F++  L+ G+C+A     A ++LD + S G  P+ V YN +I S C  G  E A 
Sbjct: 182 CRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAE 241

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL- 220
           ++ +++  D   P V+T+   I A                  +C  G + +A +  R + 
Sbjct: 242 RLVERMREDGLFPDVVTFNSRISA------------------LCSAGKILEASRIFRDMQ 283

Query: 221 --ESRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             E  G  +P++ ++N++L      G  EE + L+  M   G    + +Y+I +  L R+
Sbjct: 284 IDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN 343

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           GK  +A   L+   +KG+ P+ YS++ ++   CK+G +  A   +  MIS G  PD V Y
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           +T+L   C  G   +A  I  ++   GC PN  + N +  +LW  G    A  ++ +M  
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNE 463

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGL---------------------LVDMEST--R 434
           +  + D +T N +I  LC+ G +DEAV +                     LVD  S   +
Sbjct: 464 RSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKK 523

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             P +I+Y+III G CK  R++E+ +    M  K   P+   Y   I 
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIH 571



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 229/510 (44%), Gaps = 48/510 (9%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVME 96
           T F  +++   + G  +E+   +ESM  NG   ++      +    +  K  +A + + E
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +++K  EP+++++N ++ G CK   I  A  ++  + S G  PD VTY+ ++   CS G 
Sbjct: 356 MVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  A  +  +++R  C P   T  IL+ +   EG+  +A KLL +M              
Sbjct: 416 VLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNI 475

Query: 203 ---GMCKKGMVGQAFQFVRSLESRG-----------------------CQPDVISYNMLL 236
              G+CK G + +A + V  +   G                       C PD+I+Y++++
Sbjct: 476 VIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIII 535

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L   G+ +E  K   EM+ + L P+ + Y   I S C+ GK   A  VL+  +++G  
Sbjct: 536 NGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCN 595

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
               +Y+ LI       ++      LD M   G  P+I  YN +++  C+ G    A  +
Sbjct: 596 KSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSL 655

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE---PDEITYNSLISC 413
            +++   G  PN+SS+  +  A   + D     G++ E+    +      E  Y+ + + 
Sbjct: 656 LDEMLQKGISPNISSFRLLIKAFCKASD----FGVVKEVFEIALSICGHKEALYSLMFNE 711

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           L   G V EA  L        F      YN +I   CK   +  + ++L  M +KG + +
Sbjct: 712 LLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFD 771

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +++ +I+G+G  G + +A ELA  ++ M
Sbjct: 772 PASFMPVIDGLGKRGKKHDADELAERMMDM 801



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 205/401 (51%), Gaps = 22/401 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V+ YN ++    + ++++  + +   +   G SP+  T N++I  LC  G  E A +V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           FD++    C+P   ++ IL++     G + +A++LLD MG                  S 
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMG------------------SF 215

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G QP+ + YN L+ +    G+ EE E+L+  M   GL P+VVT++  IS+LC  GK  +A
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA 275

Query: 284 VDVLRAAK---EKGLT-PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             + R  +   E GL  P+  +++ ++  +CK+G L+ A   ++ M  +G L ++ +YN 
Sbjct: 276 SRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNI 335

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
            L    +NG   +A    +++ D G  PN+ S+NT+   L  +G    A  ++  M+S G
Sbjct: 336 WLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSG 395

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I PD +TY++L+   C  G V +A  +L +M      P   + NI++    K  RI E+ 
Sbjct: 396 IGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAE 455

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++L  M E+    +  T  ++I+G+   G   EA+E+   +
Sbjct: 456 KLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 204 MCKKGMVGQAFQFVRSLESR--GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + K G+   AF   +S  S+     P V  YNM+L + L   K +    L  +M+  G+ 
Sbjct: 89  LAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVS 148

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P   T ++LI+ LC  G+ EDA +V      KG  P+ +S+  L+  YC+ G    A+E 
Sbjct: 149 PETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL 208

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M S G  P+ V YNT++++FC+ G  ++A  + E++ + G  P+V ++N+  SAL S
Sbjct: 209 LDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS 268

Query: 382 SGDKIRALGMISEML---SKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +G  + A  +  +M      G+  P+  T+N ++   C++GM++EA  L+  M+      
Sbjct: 269 AGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLM 328

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            + SYNI +LG  +  ++ E+   L  M +KG +PN  ++  +++G+   G  ++A  + 
Sbjct: 329 ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 498 NALVSMHAISRDT 510
             ++S   I  DT
Sbjct: 389 GLMIS-SGIGPDT 400



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 80/425 (18%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+++G  PD V  + L+       K  KA  ++ E++ +   P+ +  N L+    K  +
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGR 450

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL-------------- 167
           I  A K+L ++  R +  D VT NI+I  LC  G ++ A ++ + +              
Sbjct: 451 IFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNS 510

Query: 168 ---LRDN------CKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
              L D+      C P +ITY+I+I      G+ D+A K   EM                
Sbjct: 511 FIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFI 570

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              CK G +  AF+ ++ +E RGC   + +YN L+  L +  +  E   L+ +M  +G+ 
Sbjct: 571 HSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGIT 630

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN+ TY+ +IS LC  G+ +DA  +L    +KG++P+  S+  LI A+CK     +  E 
Sbjct: 631 PNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEV 690

Query: 322 LDYMIS---------------------------------DGCLPDIVN--YNTILAAFCK 346
            +  +S                                 D C  D+ N  YN ++   CK
Sbjct: 691 FEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCF-DLGNFQYNDLIEKLCK 749

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML---SKGIEPD 403
           +   + A +I  K+ D G   + +S+  +   L   G K  A  +   M+   S+G+  +
Sbjct: 750 DEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVEN 809

Query: 404 EITYN 408
           +IT N
Sbjct: 810 KITRN 814


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 18/438 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFA 108
           AG   E+L     M  +G +PD+V    L K F      N A  +++ +L K   P++  
Sbjct: 329 AGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVT 388

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI G C+   +E A K+   + S GF   +++  +++GSLC    ++ AFK+F ++ 
Sbjct: 389 YTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEME 448

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            +  +P +ITY+ LI     +G+  +A+ L ++M                 G+C+KG + 
Sbjct: 449 ANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKIS 508

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           QA  +   L +     D+I YN+++   +  G   E  KL  ++  +G+ P +VT++ L+
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
              C + K   A  +L   K  GL P+A +Y  L++ YC++G +   +E L  M +    
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P  + Y  ++   CK     ++ ++ E +  VG  P+  SYNT+  A   + D  +A  +
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +ML   +EP  +TYN LI+  C  G + +A  LLV +++ +      +Y  II   C 
Sbjct: 689 YDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCA 748

Query: 452 TRRINESIEVLAAMFEKG 469
              +++++     M EKG
Sbjct: 749 KGDVDKAVVYFRQMVEKG 766



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 222/436 (50%), Gaps = 19/436 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R  +F +++ F +       +P VV    ++ ++ +    + A     ++ K+G  PD +
Sbjct: 258 RQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAY 317

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI G C A  +  A  + + + + G  PD+VTYNI+       G+I  A+ +  ++
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKM 377

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L     P ++TYT+LI                   G C+ G V +A +  + + S G Q 
Sbjct: 378 LIKGPNPNLVTYTVLI------------------CGHCQIGNVEEALKLYKEMISHGFQL 419

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +IS  +LL +L    + +   KL  EM + GL P+++TYS LI  LC+ G+ + A+ + 
Sbjct: 420 SIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY 479

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                  + P++  +  ++   C+ G++  A  + DY+I+     DI+ YN ++  + K 
Sbjct: 480 EKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A++++++L + G  P + ++N++      +    +A  ++  +   G+EP+ +TY
Sbjct: 540 GNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTY 599

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L++  C +G +   + LL +M++    PT I+Y ++I G CK  ++ ES ++L  M  
Sbjct: 600 TTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDA 659

Query: 468 KGCKPNETTYVLLIEG 483
            G  P++ +Y  +I+ 
Sbjct: 660 VGLTPDQVSYNTIIQA 675



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 219/462 (47%), Gaps = 25/462 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN +L+++ V       LI    + G  +E+L   + M+++G +  ++  T L+    + 
Sbjct: 382 PNPNLVTYTV-------LICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKS 434

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           R+ + A ++   +E  G  PD+  Y+ LI G CK  +++ A  + +++ S    P+ + +
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIH 494

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG- 203
             ++  LC +G I  A   FD L+  N    +I Y I+I   +  G T +A+KL  ++G 
Sbjct: 495 GAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGE 554

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                            C    + QA + + +++  G +P+ ++Y  L+      G  + 
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L++EM ++ + P  +TY+++I  LC+  K +++  +L      GLTPD  SY+ +I 
Sbjct: 615 LLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQ 674

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+CK   +  A +  D M+     P  V YN ++  FC  G+   A  +   L +     
Sbjct: 675 AFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNL 734

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  +Y T+  A  + GD  +A+    +M+ KG E     Y+++I  LC+  +V EA    
Sbjct: 735 NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
             M S    P    + +++  F +   +N   E+LA M + G
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 191/401 (47%), Gaps = 18/401 (4%)

Query: 84  QERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           Q R  +  +   +   K  +P V ++N ++S +CK   +++A      +   G  PD  +
Sbjct: 259 QSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYS 318

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YNI+I  LC  G +  A  + + +     +P ++TY IL           K  +LL    
Sbjct: 319 YNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA----------KGFRLL---- 364

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
               G++  A+  ++ +  +G  P++++Y +L+     +G  EE  KL  EMIS G + +
Sbjct: 365 ----GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLS 420

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +++ ++L+ SLC+  + + A  +    +  GL PD  +Y  LI   CK G +  AI   +
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYE 480

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M S+  +P+ + +  IL   C+ G   QA   F+ L       ++  YN M       G
Sbjct: 481 KMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRG 540

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
           +   A+ +  ++  KGI P  +T+NSL+   C +  + +A  LL  ++     P  ++Y 
Sbjct: 541 NTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYT 600

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            ++  +C+   +   +E+L+ M  K   P   TY ++I+G+
Sbjct: 601 TLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 183/393 (46%), Gaps = 21/393 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            ++ L   + ++  +  A  VL +++   F   + TYN ++ +L    ++   + V++++
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIM---WDVYNEI 237

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                  +  T +I++                   G+C++     A  F +  E +  QP
Sbjct: 238 KVSGTPQSEYTSSIVVD------------------GLCRQSRFQDAVLFFQDTEGKEFQP 279

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V+S+N ++     +G  +  +     M+  GL P+  +Y+ILI  LC  G   +A+D+ 
Sbjct: 280 SVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLK 339

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  GL PD  +Y+ L   +   G ++ A   +  M+  G  P++V Y  ++   C+ 
Sbjct: 340 NDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQI 399

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN ++AL++++++   G   ++ S   +  +L  S     A  +  EM + G+ PD ITY
Sbjct: 400 GNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITY 459

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           ++LI  LC+ G V +A+ L   M S R  P  + +  I++G C+  +I+++      +  
Sbjct: 460 STLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLIT 519

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
                +   Y ++I+G    G   EA++L   L
Sbjct: 520 SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 148/298 (49%), Gaps = 5/298 (1%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG-KWEEGEKLMTEMISRGLEPNV 264
           +  MV  A   +  ++       + +YN LL  L +    W+    +  E+   G   + 
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD----VYNEIKVSGTPQSE 246

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T SI++  LCR  + +DAV   +  + K   P   S++ ++S YCK G +D+A  F   
Sbjct: 247 YTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCM 306

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G LPD  +YN ++   C  G+  +AL++   + + G  P++ +YN +       G 
Sbjct: 307 MLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGL 366

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I +ML KG  P+ +TY  LI   C+ G V+EA+ L  +M S  F+ ++IS  +
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++   CK+R+++ + ++   M   G +P+  TY  LI G+   G   +A+ L   + S
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCS 484



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 133/278 (47%), Gaps = 8/278 (2%)

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +  +P+VV+++ ++S  C+ G  + A        + GL PDAYSY+ LI   C  G +  
Sbjct: 275 KEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGE 334

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A++  + M + G  PD+V YN +   F   G  + A  I +K+   G  PN+ +Y  +  
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                G+   AL +  EM+S G +   I+   L+  LC+   VD A  L  +ME+   RP
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            +I+Y+ +I G CK   + ++I +   M      PN   +  ++ G+   G  ++A    
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514

Query: 498 NALVS--------MHAISRDTFKRLNRTFPLLDVYKEI 527
           + L++        ++ I  D + +   T   + +YK++
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 233/487 (47%), Gaps = 40/487 (8%)

Query: 13  NERVRVSSSAETRPNTHLL---SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK 69
           NE +  SS + T    HL+    F V    F+ +++  FR  KF     + +++ A    
Sbjct: 510 NEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF----MYGKAIQAAVKL 565

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
            DV    +L  +   +R S               P VF YN LI G CK  Q++ A ++ 
Sbjct: 566 SDVGKGLELFNRMKHDRIS---------------PTVFIYNVLIDGLCKVRQMKDAEQLF 610

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D + +R   P ++TYN +I   C  G  E +FKV +++  DN +P++IT+  L++     
Sbjct: 611 DEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK----- 665

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+ K GMV  A   +  ++ +G  PD  ++++L     +  K +   
Sbjct: 666 -------------GLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            +    +  GL+ N  T SIL+++LC++G+ E A ++L     KGL P+   Y+ +I  Y
Sbjct: 713 GVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGY 772

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            + G L  A   +D M   G  PD + YN ++  FC+ G+ + A +   K+   G  P+V
Sbjct: 773 SRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSV 832

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YN +        +  +   ++ EM   G  P+ ++Y +LI+CLC+   + EA  +  D
Sbjct: 833 ETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 892

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           ME     P V  YN++I G C   +I ++      MF+KG + N  TY  LI+G+   G 
Sbjct: 893 MEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGK 952

Query: 490 RAEAMEL 496
            AEA ++
Sbjct: 953 LAEAEDM 959



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 205/422 (48%), Gaps = 23/422 (5%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            + G+ +++   +   +A G  P+ V+   +I  + ++     A   ++ +EK G +PD  
Sbjct: 739  KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            AYN LI  FC+   +E A + +++++ +G SP V TYNI+IG    +   +  F +  ++
Sbjct: 799  AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              +   P V++Y  LI                    +CK   + +A    R +E RG  P
Sbjct: 859  EDNGTMPNVVSYGTLINC------------------LCKGSKLLEAQIVKRDMEDRGVSP 900

Query: 228  DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +V  YNML+    + GK E+  +   EM  +G+E N+VTY+ LI  L  +GK  +A D+L
Sbjct: 901  NVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDML 960

Query: 288  RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 KGL PD ++Y+ LIS Y   G +   I   + M + G  P +  Y+ +L + C  
Sbjct: 961  LEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTK 1019

Query: 348  GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +   +IF ++S     P++  YN +       GD  +A  +  +M+ K I  D+ TY
Sbjct: 1020 EGIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTY 1076

Query: 408  NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            NSLI    + G + E   L+ +M++    P   +Y+II+ G C+ +    +      M E
Sbjct: 1077 NSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQE 1136

Query: 468  KG 469
            KG
Sbjct: 1137 KG 1138



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 222/509 (43%), Gaps = 84/509 (16%)

Query: 59   FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
              + M+A    P ++    LI  + ++    K+ +V E ++    EP +  +N L+ G  
Sbjct: 609  LFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLF 668

Query: 118  KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
            KA  +E A  VL  ++ +GF PD  T++I+     S    ++A  V++  +    K    
Sbjct: 669  KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728

Query: 178  TYTILIQATMLEGQTDKAMKLLD-EM----------------GMCKKGMVGQAFQFVRSL 220
            T +IL+ A   EGQ +KA ++L  EM                G  +KG +  A   + ++
Sbjct: 729  TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788

Query: 221  ESRGCQPDVISYNMLLRTLLNMGKWEEGEK------------------------------ 250
            E +G +PD ++YN L+RT   +G  E  E+                              
Sbjct: 789  EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848

Query: 251  -----LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
                 L+ EM   G  PNVV+Y  LI+ LC+  K  +A  V R  +++G++P+   Y+ L
Sbjct: 849  DKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNML 908

Query: 306  ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
            I   C  G+++ A  F + M   G   ++V YNT++     NG   +A ++  ++S  G 
Sbjct: 909  IDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGL 968

Query: 366  PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI------------------------- 400
             P+V +YN++ S    +G+  R + +  EM + GI                         
Sbjct: 969  KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKI 1028

Query: 401  ------EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
                  +PD + YN ++ C    G +D+A  L   M          +YN +ILG  K  +
Sbjct: 1029 FGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 1088

Query: 455  INESIEVLAAMFEKGCKPNETTYVLLIEG 483
            + E   ++  M  +  +P   TY ++++G
Sbjct: 1089 LCEVRSLIDEMKAREMEPEADTYDIIVKG 1117



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 9/364 (2%)

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA--MKLLDEMGMCKKG 208
           L  +  IE+A  V   LLR +  P   +   L  A  L   + K     LL  + + +  
Sbjct: 438 LLQQNRIETARGVLYSLLRSDSAP-FTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESK 496

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           M+ +A     +L + G  P   S  +LL  L+   ++     +   ++     P+   Y 
Sbjct: 497 MISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 556

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
             I +  +       +++    K   ++P  + Y+ LI   CK  ++  A +  D M++ 
Sbjct: 557 KAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLAR 616

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             LP ++ YNT++  +CK+GN +++ ++ E++      P++ ++NT+   L+ +G    A
Sbjct: 617 RLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDA 676

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +++EM  +G  PD  T++ L      +   D A+G+      +  +    + +I++  
Sbjct: 677 ENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNA 736

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
            CK  +I ++ E+L     KG  PNE  Y  +I+G    G      +L  A + + A+ +
Sbjct: 737 LCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKG------DLVGARMKIDAMEK 790

Query: 509 DTFK 512
              K
Sbjct: 791 QGMK 794



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 23/265 (8%)

Query: 51   GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVFAY 109
            GK +++  F E M   G + ++V    LI       K  +A   ++EI  K  +PDVF Y
Sbjct: 916  GKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTY 975

Query: 110  NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            N+LISG+  A  ++    + + +++ G  P + TY+++I SLC++  IE   K+F ++  
Sbjct: 976  NSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM-- 1032

Query: 170  DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             + +P ++ Y  ++    + G  DKA  L       +K M+ ++              D 
Sbjct: 1033 -SLQPDLLVYNGVLHCYAVHGDMDKAFNL-------QKQMIEKSIGL-----------DK 1073

Query: 230  ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
             +YN L+   L +GK  E   L+ EM +R +EP   TY I++   C       A    R 
Sbjct: 1074 TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYRE 1133

Query: 290  AKEKGLTPDAYSYDPLISAYCKDGR 314
             +EKGL  D    D L+S   ++ R
Sbjct: 1134 MQEKGLLLDVCIGDELVSGLKEEWR 1158


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 232/460 (50%), Gaps = 20/460 (4%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCK 118
           +E M  NG  P VV     I    +      A+R++  L    +P + + YNA+I  FC+
Sbjct: 276 LEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCR 335

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             ++  A ++L+ +RS G SP   +Y+I+I  LC +G +E A  + +++++ N KP+++T
Sbjct: 336 NGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVT 395

Query: 179 YTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMV-----GQAFQFVRSLE 221
           Y+ L       G T+ ++ +   +G                G V     G A + V  + 
Sbjct: 396 YSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMR 455

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G  P+  ++N L+       + ++  ++ T M+  G++ N+ T +I+     R+G   
Sbjct: 456 MNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFW 515

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+ ++   ++ G+ P++Y+Y+ +I   CK+ + + A E L  M+ +   P  ++YNT++
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLI 575

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGI 400
             + K  N  +AL ++ K+  VG PP++ +Y TM   ++S+  K++ A  +  EM+ KG+
Sbjct: 576 DGYAKQSNPTKALLLYAKMLKVGIPPSIVTY-TMLINMFSNRSKMQEAYYLFKEMIKKGL 634

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            PDEI +  +I+  C+ G +  A  L  +M      P V++Y  +I G+ K +R++++  
Sbjct: 635 VPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADF 694

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +   M      P+  TY  LI G    G+     E+ N +
Sbjct: 695 LFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEM 734



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 208/433 (48%), Gaps = 23/433 (5%)

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLD 130
           +++   LIK F +      A  V     ++G E ++ + N L++ F +ANQ E    + +
Sbjct: 178 IIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFE 237

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGM-----IESAFKVFDQLLRDNCKPTVITYTILIQA 185
            L+  G SP+V TY IM+   C         I  A +V +++  +   PTV+TY   I  
Sbjct: 238 ELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 186 TMLEGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPD 228
               G  + A++L+ ++ +                 C+ G + +AF+ +  + S G  P 
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
             SY++L+  L   G+ E+   L+ EM+   ++P++VTYS L   LC+ G TE ++ +  
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G   D  SY+ LI+ +     +  A + +  M  +G +P+   +N ++  FCK  
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+ALE+F  +  VG   N+ + N M       G    AL +I+E+   GI P+  TYN
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I  LC++   ++A  +L  M      P  I YN +I G+ K     +++ + A M + 
Sbjct: 538 IVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKV 597

Query: 469 GCKPNETTYVLLI 481
           G  P+  TY +LI
Sbjct: 598 GIPPSIVTYTMLI 610



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/490 (23%), Positives = 207/490 (42%), Gaps = 60/490 (12%)

Query: 37  ETQFMKLIKRSFRAGKFDESLY----FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
            T F K +  SF    F  S+Y     I  + + G + +V +  + I  +++E   + + 
Sbjct: 105 HTNFFKAV--SFHG--FSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSE 160

Query: 93  RVMEILEKYGEPD----VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
               +L+   +      +   N LI  F + N +  A  V  + R  G   ++++ N ++
Sbjct: 161 LFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLL 220

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
                    E    +F++L      P V TYTI++     +G   K + ++         
Sbjct: 221 NCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMN-YYCKGSFGKNIDIV--------- 270

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A + +  +E  G  P V++Y   +  L   G  E   +L+ ++  R    N   Y+
Sbjct: 271 ---KATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYN 327

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            +I   CR+G+  +A ++L   +  G++P AYSY  LI   CK G+++ A++ ++ M+  
Sbjct: 328 AVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQS 387

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              P +V Y+++    CK+G  + +L +F  L   G   +V SYNT+ +      D   A
Sbjct: 388 NVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSA 447

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLC--------------------------------- 415
             ++ EM   G  P+  T+N LI   C                                 
Sbjct: 448 CKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507

Query: 416 --RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             R+G   EA+ L+ +++     P   +YNI+I   CK ++  ++ EVL  M +    P 
Sbjct: 508 FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567

Query: 474 ETTYVLLIEG 483
              Y  LI+G
Sbjct: 568 AIHYNTLIDG 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 23/381 (6%)

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           EL + +LD  +       ++  N++I       M+  A  VF Q  R   +  +++   L
Sbjct: 160 ELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFL 219

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL-- 240
           +       QT+    L +E                  L+  G  P+V +Y +++      
Sbjct: 220 LNCFAEANQTEFIRSLFEE------------------LKDSGPSPNVFTYTIMMNYYCKG 261

Query: 241 NMGK---WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           + GK     +  +++ EM   G  P VVTY   I  LCR G  E A+ ++R  + +    
Sbjct: 262 SFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPL 321

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           ++Y Y+ +I  +C++G L  A E L+ M S G  P   +Y+ ++   CK G  ++AL++ 
Sbjct: 322 NSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLI 381

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
           E++      P++ +Y+++F  L  SG    +L M   + ++G + D I+YN+LI+     
Sbjct: 382 EEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQ 441

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             +  A  L+ +M      P   ++N +I GFCK +R+++++EV   M + G + N  T 
Sbjct: 442 RDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC 501

Query: 478 VLLIEGIGYGGWRAEAMELAN 498
            ++ +     G   EA++L N
Sbjct: 502 NIMADEFNREGHFWEALKLIN 522



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 18/293 (6%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            F +++   G    + ++ +++  L + G   E +  + ++IS   E N+   S L S+L
Sbjct: 107 NFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNL-DVSELFSTL 165

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
                       L + ++  +       + LI  + ++  L  A +        G   +I
Sbjct: 166 ------------LDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNI 213

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS-----ALWSSGDKIRAL 389
           ++ N +L  F +    +    +FE+L D G  PNV +Y  M +     +   + D ++A 
Sbjct: 214 LSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKAT 273

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            ++ EM   G  P  +TY + I  LCR G V+ A+ L+ D+           YN +I  F
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           C+   ++E+ E+L  M   G  P   +Y +LI+G+   G   +A++L   +V 
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQ 386


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 222/455 (48%), Gaps = 25/455 (5%)

Query: 49  RAGKFDESL-YFIESMVANGCK-PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPD 105
           RAG  D +L  F  +    GC  P V +   L+    +E      V V + + K G EP+
Sbjct: 102 RAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPN 161

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V+ YN LI   C+ +++  A ++LD +  +G  PD V++  +I +LC    ++ A  +  
Sbjct: 162 VYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILA 221

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++      P   +Y  ++ A   + +  +   ++DEM                   CK  
Sbjct: 222 EM-----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAR 276

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            +  A   +  + + GC P+V ++ +L++   + GK  +   +   M++ G  P+ ++Y+
Sbjct: 277 ELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYN 336

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LI  LC  G  + A+ V     +    PD  +Y  LI  + K G LD+A+   + M + 
Sbjct: 337 VLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC P++V Y  ++   CK    DQA  + +K+S   CPPN  ++NT+  +L   G   RA
Sbjct: 397 GCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRA 456

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L +   M   G  P++ TYN L+  L R+G  ++A+ +L +M +  F  +++SYN  I G
Sbjct: 457 LNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISG 516

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            C+ R I E++ +L  M  +G +P+  T+  +I  
Sbjct: 517 LCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHA 551



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 206/442 (46%), Gaps = 22/442 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK   +  +   +   ++ M   GC+PD V  T +I    +  + ++A  ++  +   G
Sbjct: 168 LIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                +YNA++   C   ++     V+D +  RG  PD V Y  ++G+ C    +  A  
Sbjct: 228 A----SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACA 283

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +  +++ + C P V T+T+L++    +G+   A+ + + M                   +
Sbjct: 284 ILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWM------------------VA 325

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G  P  ISYN+L+R L ++G  +    + + M      P+V TYS LI    + G  + 
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ +       G  P+   Y  ++   CK    D A   +D M  + C P+ + +NT++ 
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           + C  G A +AL +F  +   GCPPN  +YN +   L+  G+   AL M++EML+ G E 
Sbjct: 446 SLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
             ++YN+ IS LC+  M+ EA+ LL  M     +P   ++N II  +CK   +  +  +L
Sbjct: 506 SLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWML 565

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M    C  N   Y  L+ G+
Sbjct: 566 GRMDAVNCPRNIVAYTSLMSGL 587



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 204/444 (45%), Gaps = 26/444 (5%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK--- 100
           ++R   AG  D   Y ++ M   G           I  F +   +++A++          
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P V  YN L+    + N +     V D +R  G  P+V TYN++I +LC    + +A
Sbjct: 122 CAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAA 181

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
            ++ D++ R  C+P  +++T +I A     + D+A  +L EM                  
Sbjct: 182 RRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM------------------ 223

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
                 P   SYN ++  L    +  E   ++ EM+ RGL P+ V Y+ ++ + C+  + 
Sbjct: 224 -----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAREL 278

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
             A  +L     +G  P+  ++  L+  +  DG++  A+   ++M+++G  P  ++YN +
Sbjct: 279 RMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVL 338

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   C  G+  +AL +F  +    C P+V +Y+T+      +GD   A+ + ++M + G 
Sbjct: 339 IRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGC 398

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P+ + Y +++  LC+  M D+A  L+  M      P  +++N +I   C   R   ++ 
Sbjct: 399 KPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALN 458

Query: 461 VLAAMFEKGCKPNETTYVLLIEGI 484
           V   M   GC PN+ TY  L+ G+
Sbjct: 459 VFHGMRRYGCPPNDRTYNELLHGL 482



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 19/358 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+K  F  GK  ++L     MVA G  P  +    LI+         +A+ V   + 
Sbjct: 300 FTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMG 359

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K    PDV  Y+ LI GF KA  +++A  + + + + G  P+VV Y  M+  LC + M +
Sbjct: 360 KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFD 419

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  + D++  +NC P  +T+  LI++                  +C  G  G+A     
Sbjct: 420 QAENLIDKMSLENCPPNTLTFNTLIRS------------------LCDLGRAGRALNVFH 461

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   GC P+  +YN LL  L   G  E+  +++TEM++ G E ++V+Y+  IS LC+  
Sbjct: 462 GMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMR 521

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A+ +L     +G+ PDA++++ +I AYCK+G +  A   L  M +  C  +IV Y 
Sbjct: 522 MIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYT 581

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           ++++  C     D A+    K+   G  PN +++N +   +++    I  + +I  ++
Sbjct: 582 SLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHII 639



 Score = 45.8 bits (107), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 23/117 (19%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALI 113
           E++  +  M+  G +PD      +I  + +E     A  ++  ++    P ++ AY +L+
Sbjct: 525 EAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLM 584

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           SG C  ++++ A   L ++   G  P+  T+N+++  + +         + D ++ D
Sbjct: 585 SGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIED 641


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 19/432 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF +L+    RAGK   ++  +  M  +GC PD+ +C   +       + +KA+   E +
Sbjct: 164 QFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G EPDV+ YN LI G C A ++  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283

Query: 158 ESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG--- 203
           E    +  ++  D    P  +TY +LI      G  D+A++ L          DE+G   
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C  G + +A + V  + S+GCQPDV++Y+ ++     +G+ ++  K+M  M    
Sbjct: 344 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 403

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN VT++ L++ LC+ GKT +A ++L  ++E+  TP   +Y  ++  + ++G+L  + 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N ++ A CK+    +A +  E+    GC  NV ++ T+    
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   AL ++ +M      PD +TY  ++  L + G + EA GL+  M +    PT 
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583

Query: 440 ISYNIIILGFCK 451
           ++Y  +I  +C+
Sbjct: 584 VTYRTVIHRYCE 595



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 204/451 (45%), Gaps = 18/451 (3%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            D +   +  M+  G +       +L+  + +  K   A+RV+ +++K G  PD+   N 
Sbjct: 143 HDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNM 202

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
            ++    A +++ A +  +R+R  G  PDV TYN +I  LC    +  A ++   +L++ 
Sbjct: 203 AVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNG 262

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           C P  I+Y  ++     E + ++   LL  M                     G  PD ++
Sbjct: 263 CPPDKISYYTVMSFLCKEKRVEEVRGLLQRM-----------------RNDAGLFPDQVT 305

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+L+  L   G  +E  + + E   +    + V YS ++ S C +G+  +A +++    
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG  PD  +Y  ++  +C+ G LD A + + +M  + C P+ V +  +L   CK G   
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+  K  +    P+  +Y+ +       G    +  ++ +ML KG  P  +  N LI
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLI 485

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+D    EA   +   +S      V+++  +I GF +   +  ++ ++  M+     
Sbjct: 486 HALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRH 545

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY ++++ +G  G   EA  L   +++
Sbjct: 546 PDVVTYTVVVDALGKKGRLKEATGLVEKMLN 576



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 15/329 (4%)

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE------MGMCKKGMVGQAFQFVRS 219
           +L+RD C+   +  +    +  LE Q    +++L        +    +G V +AF+F R 
Sbjct: 60  RLVRDTCRLLELRESW---SPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRW 116

Query: 220 LESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +      P+V  ++ +L  L N    +   +++  MI RG+      ++ L+ S  R
Sbjct: 117 ADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSR 174

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GK   A+ VL   ++ G  PD    +  ++     GR+D A+EF + M   G  PD+  
Sbjct: 175 AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYT 234

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   C       A+E+   +   GCPP+  SY T+ S L          G++  M 
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMR 294

Query: 397 S-KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G+ PD++TYN LI  L + G  DEA+  L + E  RFR   + Y+ I+  FC   R+
Sbjct: 295 NDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRM 354

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            E+ E++  M  KGC+P+  TY  +++G 
Sbjct: 355 AEAKEIVGEMISKGCQPDVVTYSTVVDGF 383



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 174/372 (46%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V E  +  ++      G+  E+   +  M++ GC+PDVV  + ++  F +  + ++A 
Sbjct: 334 FRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQAR 393

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K   +P+   + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 394 KMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGF 453

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G ++ +  V  Q+L+    PT +   +LI A                  +CK     
Sbjct: 454 RREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA------------------LCKDRKPA 495

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F+   +S+GC  +V+++  ++      G  E    LM +M      P+VVTY++++
Sbjct: 496 EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVV 555

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L + G+ ++A  ++     +G+ P   +Y  +I  YC+ G L+  +  L+ M++   +
Sbjct: 556 DALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM 615

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                YN ++   C  G  ++A  +  K+       +  + + +  +  + G  ++A  +
Sbjct: 616 KSA--YNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNV 673

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 674 ACRMFRRNLIPD 685



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 16/232 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R GK  ES   +  M+  G  P  V    LI    ++RK  +A   ME  +  G   +V 
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVV 514

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I GF +   +E A  ++D +      PDVVTY +++ +L  +G ++ A  + +++
Sbjct: 515 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 574

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------GMCKKGMVGQ 212
           L     PT +TY  +I     +G  +  + LL++M                +C  G + +
Sbjct: 575 LNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNE 634

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           A+  +  +       D  + ++L+ + LN G   +   +   M  R L P+V
Sbjct: 635 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 233/467 (49%), Gaps = 26/467 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMV-ANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  L++  F   K  ++++  + +V  N C+P+ VM   ++    ++  + KA  ++ ++
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           E+   +P+   Y+ +I  FCK   ++ A  +L+ ++ +   PD+ TY+ +I +LC     
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW 264

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E+   +F +++  N  P V T+  +I                   G+CK+G V  A + +
Sbjct: 265 ENVRTLFLEMIHLNIYPNVCTFNSVID------------------GLCKEGKVEDAEEIM 306

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +  +G  PDVI+YNM++      G+ +   ++   MI++ +EPN+++Y+ILI+   R 
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQ 366

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            K ++A+ V R   +KGL P   + + L+    + GR   A  F D M+S G +PD+  +
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH 426

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T+L  + KNG  ++A+  F KL       N+  Y  +   L  +G   +A     ++  
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPL 486

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ PD ITY ++IS  C++G++DEA  +L  ME         +YN+I+ GF ++ +++E
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
               L  +  K       T  LL++ I      AE   L N +   H
Sbjct: 547 MKAFLEEIAGKSFSFEAATVELLMDII------AEDPSLLNMIPEFH 587



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 223/467 (47%), Gaps = 27/467 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNA 111
            D++      MV     P VV  +KL+K     +  +  V +   + K   P   F  + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +++  C  ++ +L   VL     +G   + V +N ++  L +   ++ A  +F +L+R+N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 172 -CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
            C+P  + Y  ++     +G T KA  LL  M                   CK GM+  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
              +  ++ +   PD+ +Y+ L+  L  + +WE    L  EMI   + PNV T++ +I  
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC++GK EDA +++R   EKG+ PD  +Y+ +I  Y   G++D A E  D MI+    P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I++YN ++  + +    D+A+++  ++S  G  P++ + N +   L+  G    A     
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EMLS G  PD  T+ +L+    ++G+V+EA+     +E  R    +  Y  +I G CK  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 454 RINESIEVLAAMFEK----GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +++++     A FEK    G  P+  TY  +I G    G   EA ++
Sbjct: 473 KLDKA----HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 219/433 (50%), Gaps = 26/433 (6%)

Query: 75  CTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
           C  L+  + + R+   A    +  ++   EPD  +YN L++GF KA  ++ A  +   ++
Sbjct: 105 CNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
             G +  + ++NI++  LCS G I  A++VF  +      P +I+YTI+I          
Sbjct: 165 DSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMID--------- 213

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK   V +A    + +  +   PDV++Y  L+  L    + +E   L  
Sbjct: 214 ---------GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AAKEKGLTPDAYSYDPLISAYCKD 312
           E  ++G  P VVTY+ +I  LC+ G+ E+A+ +     +E  L PD ++Y  LI+     
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVS 370
            R + A E  + M+  GC PD+V YNT+L   CK+G  D+A+EIF K+  VG  C PNV 
Sbjct: 325 NRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG-VGNVCDPNVI 383

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y  +            A+ +  EM  + + PD +T+ ++I  LC++  +DEA  L   +
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
             T  +P  + +N ++ G+CK  RI+++ ++   M + GC P   TY  L+ G    G  
Sbjct: 444 GKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRY 502

Query: 491 AEAMELANALVSM 503
           ++A+ + + ++ M
Sbjct: 503 SDALIMYHEMIEM 515



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 189/391 (48%), Gaps = 23/391 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI-KKFFQERKSNKA 91
           F+  E  +  L+   F+AG   ++L     M  +G    V+    ++ +      K + A
Sbjct: 133 FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA--VLRSHNIVLRGLCSGGKISMA 190

Query: 92  VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             V + +     P++ +Y  +I G CK+ +++ A  +  ++  +   PDVVTY  +I  L
Sbjct: 191 WEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGL 250

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
             +  ++ A+ +F++     C PTV+TY  +I      G+ + A+ L D+M         
Sbjct: 251 GKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPD 310

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+       +A++    +   GC PDV++YN LL  L   G  ++  ++  
Sbjct: 311 MFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFR 370

Query: 254 EM-ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           +M +    +PNV+TY++LI   C+  +  DAV + +  + + L PDA ++  +I   CK+
Sbjct: 371 KMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKE 430

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R+D A E  +  I   C PD V +NT+LA +CK    D A ++ +++ D GC P +++Y
Sbjct: 431 SRIDEAHELFE-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATY 489

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             + +    +G    AL M  EM+  G  P+
Sbjct: 490 TALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 172/366 (46%), Gaps = 22/366 (6%)

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           F+ +  T N ++        +E A   F   +++  +P  ++Y  L+      G   KA+
Sbjct: 98  FTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKAL 157

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            L  EM              +RS            +N++LR L + GK     ++  +M 
Sbjct: 158 ALFGEMK-------DSGIAVLRS------------HNIVLRGLCSGGKISMAWEVFKDM- 197

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S    PN+++Y+I+I  LC+  K + A+ + +   +K + PD  +Y  LI    K  R+ 
Sbjct: 198 SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVK 257

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTM 375
            A +  +   + GC P +V YNT++   CK G  + AL +++ +  +    P++ +Y+ +
Sbjct: 258 EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            + L  S    +A  +  EML  G  PD +TYN+L+  LC+ G  D+A+ +   M     
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNV 377

Query: 436 -RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P VI+Y ++I  FCK  R+ +++++   M  +   P+  T+  +I+ +       EA 
Sbjct: 378 CDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAH 437

Query: 495 ELANAL 500
           EL  ++
Sbjct: 438 ELFESI 443



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 21/269 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDVFAY 109
           +  E+    E   A GC P VV    +I    +  +   A+ + +  + E + +PD+F Y
Sbjct: 255 RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTY 314

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           +ALI+G   +N+ E A ++ + +   G SPDVVTYN ++  LC  G  + A ++F ++  
Sbjct: 315 SALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374

Query: 170 DN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            N C P VITYT+LI       +   A+KL  EM                  +CK+  + 
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRID 434

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A +   S+  + C+PD + +N +L     + + ++ +KL   M+  G  P + TY+ L+
Sbjct: 435 EAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
           +  CR G+  DA+ +     E G  P+ +
Sbjct: 494 TGFCRTGRYSDALIMYHEMIEMGFPPERH 522



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 10/280 (3%)

Query: 234 MLLRTLLNMGKWEEG-EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AAK 291
           ++LR +++  +  EG EK      S GL  +++   ++   + R      A +V + A K
Sbjct: 41  IILRQVVDSKRAGEGIEK------SLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGK 94

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           +   T + ++ + L+S Y K  R++ A  F    + +   PD V+YNT++  F K G+  
Sbjct: 95  QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVK 154

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL +F ++ D G    + S+N +   L S G KI     + + +S    P+ I+Y  +I
Sbjct: 155 KALALFGEMKDSGIAV-LRSHNIVLRGLCSGG-KISMAWEVFKDMSGIFSPNLISYTIMI 212

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+   VD+A+ L   M      P V++Y  +I G  K RR+ E+ ++      KGC 
Sbjct: 213 DGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCH 272

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           P   TY  +I+G+   G    A+ L + +V    +  D F
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF 312


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 238/496 (47%), Gaps = 55/496 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LIK S +  +F+++  F+  M   G KPDV   + +I    +  K + A+ +  E+ E+ 
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF K    ++A ++ D+L       P+V T+NIMI  L   G ++  
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            K++D++ ++  +  + TY+ LI     EG  DKA  + +E+                 G
Sbjct: 275 LKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGG 334

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C+ G + ++ +  R +E R    +++SYN+L++ LL  GK +E   +   M ++G   +
Sbjct: 335 FCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL- 322
             TY I I  LC +G    A+ V++  + KG   D Y+Y  +I   CK  RL+ A   + 
Sbjct: 394 NTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVK 453

Query: 323 -----------------------DYMISD-----------GCLPDIVNYNTILAAFCKNG 348
                                  D  +SD           GCLP +V+YN ++   C+ G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAG 513

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A    +++ + G  P++ +Y+ +   L        AL +  + L  G+EPD + +N
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI  LC  G +D+A+ ++ +ME       +++YN ++ G+ K R  N +  +   M++ 
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM 633

Query: 469 GCKPNETTYVLLIEGI 484
           G +P+  +Y  +++G+
Sbjct: 634 GLQPDIISYNTILKGL 649



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 206/437 (47%), Gaps = 20/437 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P +     L+  F + ++  K   +    E  G  P++  YN LI   CK  + E A
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              L+ +   GF PDV +Y+ +I  L   G ++ A ++FD++      P V  Y ILI  
Sbjct: 169 RGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDG 228

Query: 186 TMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESRGCQP 227
            + E     AM+L D++                  G+ K G V    +    ++    + 
Sbjct: 229 FLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK 288

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D+ +Y+ L+  L + G  ++ E +  E++ R    +VVTY+ ++   CR GK ++++++ 
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           R  +++  + +  SY+ LI    ++G++D A      M + G   D   Y   +   C N
Sbjct: 349 RIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++AL + +++   G   +V +Y ++   L        A  ++ EM   G+E +    
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI  L RD  + +A  L+  M      PTV+SYNI+I G C+  +  E+   +  M E
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 468 KGCKPNETTYVLLIEGI 484
            G KP+  TY +L+ G+
Sbjct: 528 NGLKPDLKTYSILLGGL 544



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 205/487 (42%), Gaps = 90/487 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL---------- 98
           + GK D++L   + M      PDV     LI  F +E+    A+++ + L          
Sbjct: 196 KTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNV 255

Query: 99  ---------------------------EKYGEPDVFAYNALISGFCKANQIELANKVLDR 131
                                      +   E D++ Y++LI G C    ++ A  V + 
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNE 315

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           L  R    DVVTYN M+G  C  G I+ + +++ +++       +++Y ILI+  +  G+
Sbjct: 316 LVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLENGK 374

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            D+A  +   M                 G+C  G V +A   ++ +ES+G   DV +Y  
Sbjct: 375 IDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYAS 434

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLE--------------------------------- 261
           ++  L    + EE   L+ EM   G+E                                 
Sbjct: 435 IIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNG 494

Query: 262 --PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             P VV+Y+ILI  LC  GK  +A   ++   E GL PD  +Y  L+   C+D +++LA+
Sbjct: 495 CLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELAL 554

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E     +  G  PD++ +N ++   C  G  D A+ +   +    C  N+ +YNT+    
Sbjct: 555 ELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGY 614

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +   D  RA  +   M   G++PD I+YN+++  LC    V  A+    D  +    PTV
Sbjct: 615 FKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTV 674

Query: 440 ISYNIII 446
            ++NI++
Sbjct: 675 YTWNILV 681



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 26/374 (6%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C   K  E + +    E R + +++S+++       LIK     GK DE+      M A 
Sbjct: 336 CRCGKIKESLELWRIMEQRNSVNIVSYNI-------LIKGLLENGKIDEATMIWRLMPAK 388

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVFAYNALISGFCKANQIELA 125
           G   D       I         NKA+ VM+ +E K G  DV+AY ++I   CK  ++E A
Sbjct: 389 GYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEA 448

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
           + ++  +   G   +    N +IG L     +  A  +   + ++ C PTV++Y ILI  
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILI-- 506

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G+C+ G  G+A  FV+ +   G +PD+ +Y++LL  L    K 
Sbjct: 507 ----------------CGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKI 550

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E   +L  + +  GLEP+V+ ++ILI  LC  GK +DA+ V+   + +  T +  +Y+ L
Sbjct: 551 ELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +  Y K    + A     YM   G  PDI++YNTIL   C       A+E F+   + G 
Sbjct: 611 MEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGI 670

Query: 366 PPNVSSYNTMFSAL 379
            P V ++N +  A+
Sbjct: 671 FPTVYTWNILVRAV 684



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 21/354 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R  G++   V Y+ ++  L    M+    ++ + +    CK                   
Sbjct: 35  RHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKC----------------DE 78

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           D A+ ++   G  K  M  +A   F R  E  GC+P + SYN LL   +   +W + E L
Sbjct: 79  DVALSVIKTYG--KNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESL 136

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
                + G+ PN+ TY++LI   C+  + E A   L    ++G  PD +SY  +I+   K
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAK 196

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVS 370
            G+LD A+E  D M      PD+  YN ++  F K  +   A+++++K L D    PNV 
Sbjct: 197 TGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVK 256

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N M S L   G     L +   M     E D  TY+SLI  LC +G VD+A  +  ++
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNEL 316

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              +    V++YN ++ GFC+  +I ES+E+   M E+    N  +Y +LI+G+
Sbjct: 317 VERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM-EQRNSVNIVSYNILIKGL 369



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 18/217 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKY 101
           LI    R  +  ++   +  M  NGC P VV    LI    +  K  +A   V E+LE  
Sbjct: 470 LIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENG 529

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+  Y+ L+ G C+  +IELA ++  +    G  PDV+ +NI+I  LCS G ++ A 
Sbjct: 530 LKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAM 589

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V   +   NC   ++TY  L++       +++A  +   M                 G+
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGL 649

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           C    V  A +F     + G  P V ++N+L+R ++N
Sbjct: 650 CLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK D+++  + +M    C  ++V    L++ +F+ R SN+A  +   + K G +PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISY 642

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           N ++ G C  +++  A +  D  R+ G  P V T+NI++ ++ +R M
Sbjct: 643 NTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 36/159 (22%)

Query: 339 TILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           +++  + KN   D+AL++F+++ ++ GC P + S                          
Sbjct: 83  SVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRS-------------------------- 116

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
                    YN+L++         +   L    E+    P + +YN++I   CK +   +
Sbjct: 117 ---------YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +   L  M+++G KP+  +Y  +I  +   G   +A+EL
Sbjct: 168 ARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALEL 206


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 19/432 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF +L+    RAGK   ++  +  M  +GC PD+ +C   +       + +KA+   E +
Sbjct: 164 QFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERM 223

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G EPDV+ YN LI G C A ++  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283

Query: 158 ESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG--- 203
           E    +  ++  D    P  +TY +LI      G  D+A++ L          DE+G   
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C  G + +A + V  + S+GCQPDV++Y+ ++     +G+ ++  K+M  M    
Sbjct: 344 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 403

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN VT++ L++ LC+ GKT +A ++L  ++E+  TP   +Y  ++  + ++G+L  + 
Sbjct: 404 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESC 463

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N ++ A CK+    +A +  E+    GC  NV ++ T+    
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   AL ++ +M      PD +TY  ++  L + G + EA GL+  M +    PT 
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583

Query: 440 ISYNIIILGFCK 451
           ++Y  +I  +C+
Sbjct: 584 VTYRTVIHRYCE 595



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 204/451 (45%), Gaps = 18/451 (3%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            D +   +  M+  G +       +L+  + +  K   A+RV+ +++K G  PD+   N 
Sbjct: 143 HDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNM 202

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
            ++    A +++ A +  +R+R  G  PDV TYN +I  LC    +  A ++   +L++ 
Sbjct: 203 AVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNG 262

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           C P  I+Y  ++     E + ++   LL  M                     G  PD ++
Sbjct: 263 CPPDKISYYTVMSFLCKEKRVEEVRGLLQRM-----------------RNDAGLFPDQVT 305

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+L+  L   G  +E  + + E   +    + V YS ++ S C +G+  +A +++    
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            KG  PD  +Y  ++  +C+ G LD A + + +M  + C P+ V +  +L   CK G   
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A E+  K  +    P+  +Y+ +       G    +  ++ +ML KG  P  +  N LI
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLI 485

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC+D    EA   +   +S      V+++  +I GF +   +  ++ ++  M+     
Sbjct: 486 HALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRH 545

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY ++++ +G  G   EA  L   +++
Sbjct: 546 PDVVTYTVVVDALGKKGRLKEATGLVEKMLN 576



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 15/329 (4%)

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE------MGMCKKGMVGQAFQFVRS 219
           +L+RD C+   +  +    +  LE Q  + +++L        +    +G V +AF+F R 
Sbjct: 60  RLVRDTCRLLELRESW---SPKLEAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRW 116

Query: 220 LESRG---CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
            + +      P+V  ++ +L  L N    +   +++  MI RG+      ++ L+ S  R
Sbjct: 117 ADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSR 174

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            GK   A+ VL   ++ G  PD    +  ++     GR+D A+EF + M   G  PD+  
Sbjct: 175 AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYT 234

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YN ++   C       A+E+   +   GCPP+  SY T+ S L          G++  M 
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMR 294

Query: 397 S-KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G+ PD++TYN LI  L + G  DEA+  L + E  RFR   + Y+ I+  FC   R+
Sbjct: 295 NDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRM 354

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            E+ E++  M  KGC+P+  TY  +++G 
Sbjct: 355 AEAKEIVGEMISKGCQPDVVTYSTVVDGF 383



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 174/372 (46%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V E  +  ++      G+  E+   +  M++ GC+PDVV  + ++  F +  + ++A 
Sbjct: 334 FRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQAR 393

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K   +P+   + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 394 KMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGF 453

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G ++ +  V  Q+L+    PT +   +LI A                  +CK     
Sbjct: 454 RREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA------------------LCKDRKPA 495

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F+   +S+GC  +V+++  ++      G  E    LM +M      P+VVTY++++
Sbjct: 496 EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVV 555

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L + G+ ++A  ++     +G+ P   +Y  +I  YC+ G L+  +  L+ M++   +
Sbjct: 556 DALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM 615

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                YN ++   C  G  ++A  +  K+       +  + + +  +  + G  ++A  +
Sbjct: 616 KSA--YNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNV 673

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 674 ACRMFRRNLIPD 685



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 16/232 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R GK  ES   +  M+  G  P  V    LI    ++RK  +A   ME  +  G   +V 
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVV 514

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I GF +   +E A  ++D +      PDVVTY +++ +L  +G ++ A  + +++
Sbjct: 515 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 574

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------GMCKKGMVGQ 212
           L     PT +TY  +I     +G  +  + LL++M                +C  G + +
Sbjct: 575 LNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNE 634

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           A+  +  +       D  + ++L+ + LN G   +   +   M  R L P+V
Sbjct: 635 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 246/478 (51%), Gaps = 24/478 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F++++    RAG+  ++L  +  M   G +P++++C   I  F +  +  KA+R +E ++
Sbjct: 248 FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 307

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+V  YN +I G+C  +++E A ++LD + S+G  PD V+Y  ++G LC    I 
Sbjct: 308 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIV 367

Query: 159 SAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG---- 203
               +  ++ +++      +TY  LI         D+A+  L          D++G    
Sbjct: 368 EVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAI 427

Query: 204 ---MCKKGMVGQAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              +CK+G + +A   +  + S+G C PDV++Y  ++     +G+ ++ +KL+  M + G
Sbjct: 428 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHG 487

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN V+Y+ L++ LCR GK+ +A +++  ++E+  +P++ +Y  L+    K+G+L  A 
Sbjct: 488 YKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEAC 547

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N +L + C++G   +A +  E+  + GC  NV ++ T+    
Sbjct: 548 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 607

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             + +   AL ++ +M       D  TY +L+  L + G + EA  L+  M      PT 
Sbjct: 608 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTP 667

Query: 440 ISYNIIILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++Y  +I  +C+  ++++ + +L  M   + CK   T Y  +IE +   G   EA +L
Sbjct: 668 VTYRTVIHRYCQMEKVDDLVAILEKMILRQKCK---TIYNQVIEKLCGLGKLEEADKL 722



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 201/415 (48%), Gaps = 23/415 (5%)

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A++V+ ++++ G EP++   N  I  F +AN++E A + L+R++  G  P+VVTYN MI 
Sbjct: 264 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 323

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-MCKKG 208
             C    +E A ++ D +    C P  ++Y  +                   MG +CK+ 
Sbjct: 324 GYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTI-------------------MGYLCKEK 364

Query: 209 MVGQAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            + +    ++ + +  G   D ++YN L+  L      +E    + +   +G   + V Y
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           S ++ +LC++G+  +A D++     KG   PD  +Y  +++ +C+ G +D A + L  M 
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G  P+ V+Y  +L   C+ G + +A E+     +    PN  +Y+ +   L   G   
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLS 544

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  ++ EM+ KG  P  +  N L+  LCRDG   EA   + +  +      V+++  +I
Sbjct: 545 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 604

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            GFC+   ++ ++ VL  M+      +  TY  L++ +G  G  AEA EL   ++
Sbjct: 605 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKML 659



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 191/398 (47%), Gaps = 25/398 (6%)

Query: 91  AVRVMEILEK---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           A RV+ ++++   Y  P+ F    ++  + +A Q+  A KVL  ++  G  P+++  N  
Sbjct: 229 ARRVLVLMKRRGIYRTPEAFL--RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTT 286

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I        +E A +  +++      P V+TY  +I+                  G C  
Sbjct: 287 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR------------------GYCDL 328

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVT 266
             V +A + +  + S+GC PD +SY  ++  L    +  E   LM +M    GL  + VT
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI  L +    ++A+  L+ A+EKG   D   Y  ++ A CK+GR+  A + ++ M+
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 327 SDG-CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           S G C PD+V Y  ++  FC+ G  D+A ++ + +   G  PN  SY  + + L  +G  
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           + A  M++    +   P+ ITY+ L+  L ++G + EA  ++ +M    F P  +  N++
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   C+  R +E+ + +     KGC  N   +  +I G
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 606



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 154/298 (51%), Gaps = 2/298 (0%)

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           + G +  A + +  ++  G +P+++  N  +   +   + E+  + +  M   G+ PNVV
Sbjct: 257 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 316

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY+ +I   C   + E+A+++L     KG  PD  SY  ++   CK+ R+    + +  M
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 376

Query: 326 ISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
             + G + D V YNT++    K+ +AD+AL   +   + G   +   Y+ +  AL   G 
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436

Query: 385 KIRALGMISEMLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
              A  +I+EMLSKG   PD +TY ++++  CR G VD+A  LL  M +  ++P  +SY 
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ G C+T +  E+ E++    E+   PN  TY +L+ G+   G  +EA ++   +V
Sbjct: 497 ALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMV 554



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 2/258 (0%)

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D + Y  +L  L      +   +++  M  RG+      +  ++ S  R G+  DA+ VL
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G+ P+    +  I  + +  RL+ A+ FL+ M   G +P++V YN ++  +C  
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEIT 406
              ++A+E+ + +   GC P+  SY T+   L      +    ++ +M  + G+  D++T
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+LI  L +    DEA+  L D E   FR   + Y+ I+   CK  R++E+ +++  M 
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 467 EKG-CKPNETTYVLLIEG 483
            KG C P+  TY  ++ G
Sbjct: 449 SKGHCPPDVVTYTAVVNG 466



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 20/304 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           R G+ D++   ++ M  +G KP+ V  T L+    +  KS +A  +M + E ++  P+  
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSI 528

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ L+ G  K  ++  A  V+  +  +GF P  V  N+++ SLC  G    A K  ++ 
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 588

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L   C   V+ +T +I       + D A+ +LD+M                  + KKG +
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRI 648

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + ++ +  +G  P  ++Y  ++     M K ++   ++ +MI R  +     Y+ +
Sbjct: 649 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILR--QKCKTIYNQV 706

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC  GK E+A  +L          DA +   L+  Y K G   LA +    M +   
Sbjct: 707 IEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNL 766

Query: 331 LPDI 334
           +PD+
Sbjct: 767 IPDV 770



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 7/163 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--I 97
           +  L+    + G+  E+   ++ M+  G  P  V    +I ++ Q  K +  V ++E  I
Sbjct: 635 YTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMI 694

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSRGM 156
           L +  +     YN +I   C   ++E A+K+L + LR+   S     Y +M G L   G+
Sbjct: 695 LRQKCKT---IYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYL-KIGV 750

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
              A+KV  ++   N  P V     L +  ++EG  +    LL
Sbjct: 751 PLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNMLL 793


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 227/460 (49%), Gaps = 24/460 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            IK   R G F+E++     M   G  P+ V C+  I+     ++S+     +  L    
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292

Query: 103 EP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            P D FAY A+I GFC   +++ A  V   + + G +PD   Y  +I + C  G +  A 
Sbjct: 293 WPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK----------LLDEM-------GM 204
            + + ++ +  K   +  + ++Q     G   + +            LDE+        +
Sbjct: 353 ALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDAL 412

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G V +A + +  ++ R    DV+ Y  L+      GK  + + +  EM  RG+EP++
Sbjct: 413 CKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDI 472

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+IL+    R+G  ++A+++L     +GL P++ +++ +I   C  G++  A  FL+ 
Sbjct: 473 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLN- 531

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            + D CL    NY+ ++  +CK     +A E+F +LS  G      S   + S+L   G+
Sbjct: 532 TLEDKCLE---NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGE 588

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYN 443
             +AL ++  ML+  +EP++I Y  LI   CRDG +  A  L+ DM   R   P VI+Y 
Sbjct: 589 YDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRA-QLVFDMLVERGITPDVITYT 647

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++I G+C+   + E+ ++   M E+G KP+  TY ++++G
Sbjct: 648 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 687



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 64/478 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVV-------------MCTKLIKKFFQERKSN 89
           LI    +AG   +++     MV+NG K + V             M ++++ +F + R S 
Sbjct: 338 LIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSG 397

Query: 90  ----------------KAVRVMEILEKYGEP-------DVFAYNALISGFCKANQIELAN 126
                           K  +V E +E   E        DV  Y  LI+G+C   ++  A 
Sbjct: 398 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAK 457

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            + + ++ RG  PD+VTYNI++G     G+ + A ++ D +     KP   T+  +I+  
Sbjct: 458 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 517

Query: 187 MLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
            + G+  +A   L+ +             G CK     +A++    L  +G      S  
Sbjct: 518 CMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            LL +L   G++++   L+  M++  +EPN + Y  LI + CRDG  + A  V     E+
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK------- 346
           G+TPD  +Y  +I+ YC+   L  A +  + M   G  PD++ Y  +L    K       
Sbjct: 638 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMAR 697

Query: 347 -----NGNADQALE---IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
                 G+ ++ ++    + ++ ++G  P+V  Y  +  +   + +   A+ +  EM+++
Sbjct: 698 SLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
           G++PD +TY +L+S  C  G +D A+ L+ +M      P   + +++  G  K R++ 
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 185/395 (46%), Gaps = 18/395 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +   + L+  + +    + A   L + + RGF P +++ N ++  L   G I+ A  ++ 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            L R    P   TY I I+A                  +C+KG   +A    R +E  G 
Sbjct: 217 HLKRLGLNPNDYTYGIFIKA------------------LCRKGNFEEAVDVFREMEEAGV 258

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P+ ++ +  +  L +  + + G + +  + +     +   Y+ +I   C + K ++A D
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           V      +G+ PD Y Y  LI AYCK G L  A+   + M+S+G   + V  ++IL   C
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLC 378

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           + G A + ++ F++  D G   +   YN +  AL   G    A+ +++EM  + +  D +
Sbjct: 379 EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 438

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y +LI+  C  G + +A  +  +M+     P +++YNI++ GF +     E++E+L  +
Sbjct: 439 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 498

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             +G KPN  T+  +IEG+   G   EA    N L
Sbjct: 499 GTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 533



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 185/427 (43%), Gaps = 49/427 (11%)

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           N+  LA     +L+  GF  +V TY  +I  LC   +      +  +++    K +V+ +
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLGF 132

Query: 180 TILIQATMLE--------GQTDKAMKLLDEM--GMCKKGMVGQAFQFVRSLESRGCQPDV 229
            I     +L           +   + +LD +     + GM  +A   +   + RG  P +
Sbjct: 133 DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHI 192

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +S N L+  L+  GK +    +   +   GL PN  TY I I +LCR G  E+AVDV R 
Sbjct: 193 MSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFRE 252

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIE----------------------------- 320
            +E G+ P+A +    I   C   R DL  E                             
Sbjct: 253 MEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMK 312

Query: 321 -------FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
                  F+D M+++G  PD   Y  ++ A+CK GN  QA+ +   +   G   N    +
Sbjct: 313 LKEAEDVFID-MVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVS 371

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           ++   L   G     +    E    GI  DE+ YN ++  LC+ G V+EAV LL +M+  
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           R    V+ Y  +I G+C   ++ ++  +   M E+G +P+  TY +L+ G    G + EA
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491

Query: 494 MELANAL 500
           +EL + +
Sbjct: 492 LELLDCI 498



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 34/263 (12%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           VK+    KL+      G++D++L  +E M+A   +P+ +M  KLI  F ++    +A  V
Sbjct: 571 VKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLV 630

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC- 152
            ++L + G  PDV  Y  +I+G+C+ N +  A  + + ++ RG  PDV+TY +++     
Sbjct: 631 FDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 690

Query: 153 -----------SRGMIES---AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
                      S+G  E    A   + ++     KP V+ YT+LI +         A+ L
Sbjct: 691 VNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINL 750

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
            DEM                   +RG QPD+++Y  LL +  + G  +    L+ EM  +
Sbjct: 751 YDEM------------------IARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFK 792

Query: 259 GLEPNVVTYSILISSLCRDGKTE 281
           G+EP+    S+L   + +  K +
Sbjct: 793 GIEPDSRAMSVLHRGILKARKVQ 815



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 26/278 (9%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCR---DGKTEDAVDVLRAAKEKGLTPDAYS------ 301
             T++   G + NV TY+ LI  LCR   + K +  +  +  +KE  L  D  +      
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLR 142

Query: 302 -----------------YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
                             D L+ AY + G  D AI+ L      G +P I++ N ++   
Sbjct: 143 EGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRL 202

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            ++G  D A+ I+  L  +G  PN  +Y     AL   G+   A+ +  EM   G+ P+ 
Sbjct: 203 IEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNA 262

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +T ++ I  LC     D     L  + +  +     +Y  +I GFC   ++ E+ +V   
Sbjct: 263 VTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFID 322

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           M  +G  P+   Y  LI      G   +A+ L N +VS
Sbjct: 323 MVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 222/465 (47%), Gaps = 34/465 (7%)

Query: 87  KSNKAVRVMEILEKY-GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           ++  AV+    ++++   P  F YN ++     +  I LA  + +R+ + G +P+  TYN
Sbjct: 152 RNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
           +++  LC +GM   A K+FD++L     P V  YT+L+ +    G+ D+A++LL  M   
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G V +AFQ +  L+  G    +  Y+ L+  L    +++EG
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEG 331

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
                 M+ R + P+VV Y+I+I      G+ EDA+  L   K+KG  PD + Y+ ++  
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C  G L+ A      M+ +  + D      ++   CK G  D+A++IF+++ + GC P 
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP--------------DEITYNSLISCL 414
           V +YN +    +  G ++    M+   +  G  P              D  +   L+  +
Sbjct: 452 VMTYNALIDGFYREG-RLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDM 510

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G V +A  LL  +  +   P V++YN +I G CK R ++ ++ +   +  KG  P+E
Sbjct: 511 CQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE 570

Query: 475 TTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTF 518
            TY  LI+G+       +AM L  N L S  + S   +  + R+ 
Sbjct: 571 ITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 207/483 (42%), Gaps = 70/483 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVV--------MC-------------------------- 75
           AGK DE++  + SM   GC PD V        +C                          
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 76  -TKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
            + LI   FQ R+ ++     + +LE+   PDV  Y  +I G  +A +IE A   LD ++
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +GF PD   YN ++  LC  G +E A  +  ++L++N      T TI+I          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI---------- 424

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G+V +A Q    +   GC P V++YN L+      G+ EE   L  
Sbjct: 425 --------CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFH 476

Query: 254 EMISRGLEPNVV--------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           +M   G  P++               +   L+  +C+ G+   A  +LR+  + G+ PD 
Sbjct: 477 KM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ LI+  CK   LD A+     +   G  PD + Y T++    +    + A+ +F+ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-PDEITYNSLISCLCRDG 418
           +   G  P++S YN+M  +L       +A+ +  + L K    P E    +       DG
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +D+ V  L+ ++      +   Y I ++G C+ RR ++++ +   + E G         
Sbjct: 656 SLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCA 715

Query: 479 LLI 481
           LLI
Sbjct: 716 LLI 718



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 67/440 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   F+A +FDE   + ++M+     PDVV+ T +I+   +  +   A+  +++++K G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD F YN ++   C    +E A+ +   +       D  T  IMI  LC RG+++ A 
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD--EMG---------------- 203
           ++FD++    C PTV+TY  LI     EG+ ++A  L    EMG                
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQV 497

Query: 204 ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       MC+ G V +A++ +RS+   G  PDV++YN L+  L      +   +L
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             E+  +G+ P+ +TY  LI  L R  +  DA+ + +   + G +P    Y+ ++ + C+
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617

Query: 312 DGRLDLAIE-FLDYM-------------------ISDGCLPDIVN--------------- 336
             +L  AI  +LDY+                   I DG L D V                
Sbjct: 618 MKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 337 -YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y   L   C+    D AL IF  L + G     +    + + L    +   A+ ++   
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYA 737

Query: 396 LSKGIEPDEITYNSLISCLC 415
           LSK I   +   N L+  LC
Sbjct: 738 LSKSIILSQPVGNRLLRWLC 757



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 24/372 (6%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R+ G       +  ++ +  S G    A + F ++     +PT   Y  +++A       
Sbjct: 129 RAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKA------- 181

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +   G++  A      + + GC P+  +YN+L+  L   G   +  K+ 
Sbjct: 182 -----------LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM+ RG+ PNV  Y++L+SSLC  GK ++AV +L + K+KG  PD  +Y+  +S  CK 
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR++ A + L  +   G    +  Y+ ++    +    D+    ++ + +    P+V  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             M      +G    AL  +  M  KG  PD   YN+++  LC  G ++ A  L  +M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                   +  I+I G CK   ++E++++   M E GC P   TY  LI+G    G   E
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470

Query: 493 A------MELAN 498
           A      ME+ N
Sbjct: 471 ARMLFHKMEMGN 482



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 122/242 (50%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL  +   ++ L+++    G+  DAV       E    P A+ Y+ ++ A    G + LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +   + M++ GC P+   YN ++   CK G A  AL++F+++ D G  PNV  Y  + S+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L ++G    A+ ++  M  KG  PDE+TYN+ +S LC+ G V+EA   LV ++   F   
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +  Y+ +I G  + RR +E       M E+   P+   Y ++I G    G   +A+   +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 499 AL 500
            +
Sbjct: 372 VM 373



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 4/228 (1%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           SR L  + V+  + +SS       E   D L  A+  GL   + ++  L++A+   GR  
Sbjct: 99  SRPLHAHAVSLLLRLSS----HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNA 154

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    M      P    YNTIL A   +G    AL ++ ++   GC PN ++YN + 
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L   G    AL M  EML +GI P+   Y  L+S LC  G +DEAV LL  M+     
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P  ++YN  + G CK  R+NE+ + L  + + G       Y  LI+G+
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 20/256 (7%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           KL+    ++G+  ++   + S++ +G  PDVV    LI    + R  + AVR+ + L+  
Sbjct: 505 KLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLK 564

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD   Y  LI G  +A++   A  +   +   G SP +  YN M+ SLC    +  A
Sbjct: 565 GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624

Query: 161 FKVF-DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
             ++ D L +    P            + +G  D  ++ L +        + Q + ++ S
Sbjct: 625 INLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIK--------IDQEYGYISS 676

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                  P    Y + L  L  + + ++  ++   +   G++      ++LI+ LC D  
Sbjct: 677 ------NP----YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRN 726

Query: 280 TEDAVDVLRAAKEKGL 295
              AVD++  A  K +
Sbjct: 727 LNAAVDIMLYALSKSI 742



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 52/110 (47%)

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +++  + G+      + +L++     G   +AV     M+  + RPT   YN I+     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  I  ++ +   M   GC PN  TY +L++G+   G   +A+++ + ++
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 225/487 (46%), Gaps = 47/487 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE---KYG--E 103
           + G  +E+   +E M   G  P+VV     I    +  +   A R+ + ++   ++G   
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPR 278

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD   ++ ++SGFC A  ++ A  ++D +R  GF   V +YN  +  L   G +  A ++
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++  +  +P   TY I++     EG+   A ++ + +                   C 
Sbjct: 339 LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           KG +  A + +  +  +GC P+  +YN+LL++L   G+  E E+L+  M  +G   +   
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKG-----------------------LTPDAYSYD 303
            +I+I  LCR+ + + A+D++    E+G                         PD  +Y 
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LISA CK+GR D A + L  MI     PD V Y+T +  +CK+G    A+++   +   
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P+  +YN +             + ++SEM  KGI P+ +TYNSLI   C+ GMV++A
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKA 638

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL-IE 482
           + LL +M      P + S++++I  +CK      +  V  A   + C   E  Y L+  E
Sbjct: 639 MPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAAL-RTCGQKEVLYCLMCTE 697

Query: 483 GIGYGGW 489
              YG W
Sbjct: 698 LTTYGKW 704



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 249/558 (44%), Gaps = 102/558 (18%)

Query: 40  FMKLIKRSFRAGKFD--ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           + +LI  + R  + D  E+LY  + ++ +G +PDV     L++      +   A RV + 
Sbjct: 113 YNRLILAALRESRLDLVEALY--KDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDA 170

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           +    E   F++  L  G+C+A +   A KVLD + S     ++V  N ++   C  G++
Sbjct: 171 MPARNE---FSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCNTVVAGFCKEGLV 223

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           E A ++ +++      P V+T+   I A                  +CK G V  A++  
Sbjct: 224 EEAERLVERMRVQGLAPNVVTFNARISA------------------LCKAGRVLDAYRIF 265

Query: 218 RSLE---SRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
           + ++     G  +PD ++++++L    + G  +E   L+  M   G    V +Y+  +S 
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L R+G+  +A ++LR    +G+ P++Y+Y+ ++S  CK+G+   A    +++ S    PD
Sbjct: 326 LVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y ++L A+C  GN   A  I ++++  GC PN  +YN +  +LW +G    A  ++ 
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 394 EMLSKGIEPDEITYNSLISCLCR-----------DGMVDEAVGLLVDME----------- 431
            M  KG   D    N +I  LCR           DGM +E  G L  +            
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505

Query: 432 -STRFRPTVISYNIIILGFCKTRRINE--------------------------------- 457
            S R  P  I+Y+I+I   CK  R +E                                 
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565

Query: 458 --SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL----VSMHAISRDTF 511
             +I+VL  M +KGC P+  TY LLI G        E M+L + +    +S + ++ ++ 
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625

Query: 512 KR-------LNRTFPLLD 522
            +       +N+  PLLD
Sbjct: 626 IKSFCQQGMVNKAMPLLD 643



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 20/273 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+FDE+   +  M+     PD V+    I  + +  K++ A++V+  +EK G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P    YN LI GF + ++ E   K++  ++ +G SP+V+TYN +I S C +GM+  A 
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + D++L++   P + ++ +LI+A                   CK      A Q V    
Sbjct: 640 PLLDEMLQNELVPNITSFDLLIKA------------------YCKITDFPSA-QMVFDAA 680

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            R C    + Y ++   L   GKW E + ++   +   +      Y  +IS LC  G+ +
Sbjct: 681 LRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVD 740

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
            A  +L+    K    D  ++ P+I A    G+
Sbjct: 741 HAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGK 773


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 34/474 (7%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKY-GEPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+       +   AV+    ++++   P  F YN ++     +  I LA  + +R+ + G
Sbjct: 143 LVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
            +P+  TYN+++  LC +GM   A K+FD++L     P V  YT+L+ +    G+ D+A+
Sbjct: 203 CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAV 262

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +LL  M                 G+CK G V +AFQ +  L+  G    +  Y+ L+  L
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
               +++EG      M+ R + P+VV Y+I+I      G+ EDA+  L   K+KG  PD 
Sbjct: 323 FQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           + Y+ ++   C  G L+ A      M+ +  + D      ++   CK G  D+A++IF++
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE 442

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP--------------DEI 405
           + + GC P V +YN +    +  G ++    M+   +  G  P              D  
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREG-RLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSE 501

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           +   L+  +C+ G V +A  LL  +  +   P V++YN +I G CK R ++ ++ +   +
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTF 518
             KG  P+E TY  LI+G+       +AM L  N L S  + S   +  + R+ 
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 207/483 (42%), Gaps = 70/483 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVV--------MC-------------------------- 75
           AGK DE++  + SM   GC PD V        +C                          
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 76  -TKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
            + LI   FQ R+ ++     + +LE+   PDV  Y  +I G  +A +IE A   LD ++
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +GF PD   YN ++  LC  G +E A  +  ++L++N      T TI+I          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI---------- 424

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G+V +A Q    +   GC P V++YN L+      G+ EE   L  
Sbjct: 425 --------CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFH 476

Query: 254 EMISRGLEPNVV--------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           +M   G  P++               +   L+  +C+ G+   A  +LR+  + G+ PD 
Sbjct: 477 KM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ LI+  CK   LD A+     +   G  PD + Y T++    +    + A+ +F+ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-PDEITYNSLISCLCRDG 418
           +   G  P++S YN+M  +L       +A+ +  + L K    P E    +       DG
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +D+ V  L+ ++      +   Y I ++G C+ RR ++++ +   + E G         
Sbjct: 656 SLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCA 715

Query: 479 LLI 481
           LLI
Sbjct: 716 LLI 718



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 67/440 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   F+A +FDE   + ++M+     PDVV+ T +I+   +  +   A+  +++++K G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD F YN ++   C    +E A+ +   +       D  T  IMI  LC RG+++ A 
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD--EMG---------------- 203
           ++FD++    C PTV+TY  LI     EG+ ++A  L    EMG                
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQV 497

Query: 204 ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       MC+ G V +A++ +RS+   G  PDV++YN L+  L      +   +L
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             E+  +G+ P+ +TY  LI  L R  +  DA+ + +   + G +P    Y+ ++ + C+
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617

Query: 312 DGRLDLAIE-FLDYM-------------------ISDGCLPDIVN--------------- 336
             +L  AI  +LDY+                   I DG L D V                
Sbjct: 618 MKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 337 -YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y   L   C+    D AL IF  L + G     +    + + L    +   A+ ++   
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYA 737

Query: 396 LSKGIEPDEITYNSLISCLC 415
           LSK I   +   N L+  LC
Sbjct: 738 LSKSIILSQPVGNRLLRWLC 757



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 24/372 (6%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R+ G       +  ++ +  S G    A + F ++     +PT   Y  +++A       
Sbjct: 129 RAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA------- 181

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +   G++  A      + + GC P+  +YN+L+  L   G   +  K+ 
Sbjct: 182 -----------LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM+ RG+ PNV  Y++L+SSLC  GK ++AV +L + K+KG  PD  +Y+  +S  CK 
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR++ A + L  +   G    +  Y+ ++    +    D+    ++ + +    P+V  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             M      +G    AL  +  M  KG  PD   YN+++  LC  G ++ A  L  +M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                   +  I+I G CK   ++E++++   M E GC P   TY  LI+G    G   E
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470

Query: 493 A------MELAN 498
           A      ME+ N
Sbjct: 471 ARMLFHKMEMGN 482



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 122/242 (50%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL  +   ++ L+++    G+  DAV       E    P A+ Y+ ++ A    G + LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +   + M++ GC P+   YN ++   CK G A  AL++F+++ D G  PNV  Y  + S+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L ++G    A+ ++  M  KG  PDE+TYN+ +S LC+ G V+EA   LV ++   F   
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +  Y+ +I G  + RR +E       M E+   P+   Y ++I G    G   +A+   +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 499 AL 500
            +
Sbjct: 372 VM 373



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 4/228 (1%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           SR L  + V+  + +SS       E   D L  A+  GL   + ++  L++A+   GR  
Sbjct: 99  SRPLHAHAVSLLLRLSS----HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHA 154

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    M      P    YNTIL A   +G    AL ++ ++   GC PN ++YN + 
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L   G    AL M  EML +GI P+   Y  L+S LC  G +DEAV LL  M+     
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P  ++YN  + G CK  R+NE+ + L  + + G       Y  LI+G+
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 20/256 (7%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           KL+    ++G+  ++   + S++ +G  PDVV    LI    + R  + AVR+ + L+  
Sbjct: 505 KLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLK 564

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD   Y  LI G  +A++   A  +   +   G SP +  YN M+ SLC    +  A
Sbjct: 565 GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624

Query: 161 FKVF-DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
             ++ D L +    P            + +G  D  ++ L +        + Q + ++ S
Sbjct: 625 INLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIK--------IDQEYGYISS 676

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                  P    Y + L  L  + + ++  ++   +   G++      ++LI+ LC D  
Sbjct: 677 ------NP----YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRN 726

Query: 280 TEDAVDVLRAAKEKGL 295
              AVD++  A  K +
Sbjct: 727 LNAAVDIMLYALSKSI 742



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 52/110 (47%)

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +++  + G+      + +L++     G   +AV     M+  + RPT   YN I+     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  I  ++ +   M   GC PN  TY +L++G+   G   +A+++ + ++
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 221/465 (47%), Gaps = 34/465 (7%)

Query: 87  KSNKAVRVMEILEKY-GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           +   AV+    ++++   P  F YN ++     +  I LA  + +R+ + G +P+  TYN
Sbjct: 152 RHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
           +++  LC +GM   A K+FD++L     P V  YT+L+ +    G+ D+A++LL  M   
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK 271

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G V +AFQ +  L+  G    +  Y+ L+  L    +++EG
Sbjct: 272 GCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEG 331

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
                 M+ R + P+VV Y+I+I      G+ EDA+  L   K+KG  PD + Y+ ++  
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C  G L+ A      M+ +  + D      ++   CK G  D+A++IF+++ + GC P 
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP--------------DEITYNSLISCL 414
           V +YN +    +  G ++    M+   +  G  P              D  +   L+  +
Sbjct: 452 VMTYNALIDGFYREG-RLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDM 510

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G V +A  LL  +  +   P V++YN +I G CK R ++ ++ +   +  KG  P+E
Sbjct: 511 CQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE 570

Query: 475 TTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTF 518
            TY  LI+G+       +AM L  N L S  + S   +  + R+ 
Sbjct: 571 ITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 207/483 (42%), Gaps = 70/483 (14%)

Query: 50  AGKFDESLYFIESMVANGCKPDVV--------MC-------------------------- 75
           AGK DE++  + SM   GC PD V        +C                          
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 76  -TKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
            + LI   FQ R+ ++     + +LE+   PDV  Y  +I G  +A +IE A   LD ++
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            +GF PD   YN ++  LC  G +E A  +  ++L++N      T TI+I          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI---------- 424

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CK+G+V +A Q    +   GC P V++YN L+      G+ EE   L  
Sbjct: 425 --------CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFH 476

Query: 254 EMISRGLEPNVV--------------TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           +M   G  P++               +   L+  +C+ G+   A  +LR+  + G+ PD 
Sbjct: 477 KM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ LI+  CK   LD A+     +   G  PD + Y T++    +    + A+ +F+ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-PDEITYNSLISCLCRDG 418
           +   G  P++S YN+M  +L       +A+ +  + L K    P E    +       DG
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +D+ V  L+ ++      +   Y I ++G C+ RR ++++ +   + E G         
Sbjct: 656 SLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCA 715

Query: 479 LLI 481
           LLI
Sbjct: 716 LLI 718



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 190/440 (43%), Gaps = 67/440 (15%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   F+A +FDE   + ++M+     PDVV+ T +I+   +  +   A+  +++++K G
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD F YN ++   C    +E A+ +   +       D  T  IMI  LC RG+++ A 
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD--EMG---------------- 203
           ++FD++    C PTV+TY  LI     EG+ ++A  L    EMG                
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQV 497

Query: 204 ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       MC+ G V +A++ +RS+   G  PDV++YN L+  L      +   +L
Sbjct: 498 RDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             E+  +G+ P+ +TY  LI  L R  +  DA+ + +   + G +P    Y+ ++ + C+
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617

Query: 312 DGRLDLAIE-FLDYM-------------------ISDGCLPDIVN--------------- 336
             +L  AI  +LDY+                   I DG L D V                
Sbjct: 618 MKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSN 677

Query: 337 -YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y   L   C+    D AL IF  L + G     +    + + L    +   A+ ++   
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYA 737

Query: 396 LSKGIEPDEITYNSLISCLC 415
           LSK I   +   N L+  LC
Sbjct: 738 LSKSIILSQPVGNRLLRWLC 757



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 24/372 (6%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R+ G       +  ++ +  S G    A + F ++     +PT   Y  +++A       
Sbjct: 129 RAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA------- 181

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      +   G++  A      + + GC P+  +YN+L+  L   G   +  K+ 
Sbjct: 182 -----------LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMF 230

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM+ RG+ PNV  Y++L+SSLC  GK ++AV +L + K+KG  PD  +Y+  +S  CK 
Sbjct: 231 DEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKV 290

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           GR++ A + L  +   G    +  Y+ ++    +    D+    ++ + +    P+V  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             M      +G    AL  +  M  KG  PD   YN+++  LC  G ++ A  L  +M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                   +  I+I G CK   ++E++++   M E GC P   TY  LI+G    G   E
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470

Query: 493 A------MELAN 498
           A      ME+ N
Sbjct: 471 ARMLFHKMEMGN 482



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 122/242 (50%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL  +   ++ L+++    G+  DAV       E    P A+ Y+ ++ A    G + LA
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +   + M++ GC P+   YN ++   CK G A  AL++F+++ D G  PNV  Y  + S+
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L ++G    A+ ++  M  KG  PDE+TYN+ +S LC+ G V+EA   LV ++   F   
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           +  Y+ +I G  + RR +E       M E+   P+   Y ++I G    G   +A+   +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 499 AL 500
            +
Sbjct: 372 VM 373



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 4/228 (1%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           SR L  + V+  + +SS       E   D L  A+  GL   + ++  L++A+   GR  
Sbjct: 99  SRPLHAHAVSLLLRLSS----HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHA 154

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++    M      P    YNTIL A   +G    AL ++ ++   GC PN ++YN + 
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L   G    AL M  EML +GI P+   Y  L+S LC  G +DEAV LL  M+     
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P  ++YN  + G CK  R+NE+ + L  + + G       Y  LI+G+
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 20/256 (7%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           KL+    ++G+  ++   + S++ +G  PDVV    LI    + R  + AVR+ + L+  
Sbjct: 505 KLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLK 564

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD   Y  LI G  +A++   A  +   +   G SP +  YN M+ SLC    +  A
Sbjct: 565 GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624

Query: 161 FKVF-DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
             ++ D L +    P            + +G  D  ++ L +        + Q +  + S
Sbjct: 625 INLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIK--------IDQEYGSISS 676

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                  P    Y + L  L  + + ++  ++   +   G++      ++LI+ LC D  
Sbjct: 677 ------NP----YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRN 726

Query: 280 TEDAVDVLRAAKEKGL 295
              AVD++  A  K +
Sbjct: 727 LNAAVDIMLYALSKSI 742



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 52/110 (47%)

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           +++  + G+      + +L++     G   +AV     M+  + RPT   YN I+     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  I  ++ +   M   GC PN  TY +L++G+   G   +A+++ + ++
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 243/466 (52%), Gaps = 21/466 (4%)

Query: 51  GKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           GK +++L  +E MV+     PD V    ++K   ++ + +    ++  ++K G  P+   
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN L+ G+CK   ++ A ++++ ++     PD+ TYNI+I  LC+ G +    ++ D + 
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
               +P V+TY  LI      G + +A KL+++M                  +CK+    
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397

Query: 212 QAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
              + V+ L +  G  PD+++Y+ L++  L +G      ++M EM  +G++ N +T + +
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + +LC++ K ++A ++L +A ++G   D  +Y  LI  + ++ +++ A+E  D M     
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +  +N+++   C +G  + A+E F++L++ G  P+ S++N++       G   +A  
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
             +E +    +PD  T N L++ LC++GM ++A+     +   R   TV +YN +I  FC
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFC 636

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           K +++ E+ ++L+ M EKG +P+  TY   I  +   G  +E  EL
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 211/465 (45%), Gaps = 27/465 (5%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDVFAYNALISGFC 117
            + MV  G   +V     L+  +  E K   A+ ++E  + E    PD   YN ++    
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  ++    ++L  ++  G  P+ VTYN ++   C  G ++ AF++ + + + N  P + 
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY ILI                   G+C  G + +  + + +++S   QPDV++YN L+ 
Sbjct: 312 TYNILIN------------------GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE----K 293
               +G   E  KLM +M + G++ N VT++I +  LC++ K E    V R  KE     
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA---VTRKVKELVDMH 410

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G +PD  +Y  LI AY K G L  A+E +  M   G   + +  NTIL A CK    D+A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +       G   +  +Y T+    +      +AL M  EM    I P   T+NSLI  
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           LC  G  + A+    ++  +   P   ++N IILG+CK  R+ ++ E      +   KP+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
             T  +L+ G+   G   +A+   N L+    +   T+  +   F
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAF 635



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 197/439 (44%), Gaps = 55/439 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K   + G+  +    +  M  NG  P+ V    L+  + +     +A +++E++++  
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+  YN LI+G C A  +    +++D ++S    PDVVTYN +I      G+   A 
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365

Query: 162 KVFDQLLRDNCK------------------------------------PTVITYTILIQA 185
           K+ +Q+  D  K                                    P ++TY  LI+A
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425

Query: 186 TMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPD 228
            +  G    A++++ EMG                 +CK+  + +A   + S   RG   D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            ++Y  L+       K E+  ++  EM    + P V T++ LI  LC  GKTE A++   
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              E GL PD  +++ +I  YCK+GR++ A EF +  I     PD    N +L   CK G
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++AL  F  L +      V+ YNTM SA         A  ++SEM  KG+EPD  TYN
Sbjct: 606 MTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664

Query: 409 SLISCLCRDGMVDEAVGLL 427
           S IS L  DG + E   LL
Sbjct: 665 SFISLLMEDGKLSETDELL 683



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 32/399 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
           LI   F  G   E+   +E M  +G K + V     +K   +E K     R V E+++ +
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD+  Y+ LI  + K   +  A +++  +  +G   + +T N ++ +LC    ++ A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
             + +   +       +TY  LI     E + +KA+++ DEM                 G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C  G    A +    L   G  PD  ++N ++      G+ E+  +   E I    +P+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             T +IL++ LC++G TE A++      E+    D  +Y+ +ISA+CKD +L  A + L 
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLS 649

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G  PD   YN+ ++   ++G   +  E+ +K S          + +M   L    
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS--------GKFGSMKRDLQVET 701

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
           +K  A     E L+     + I Y+ +I  LC  G + E
Sbjct: 702 EKNPATSESKEELNT----EAIAYSDVIDELCSRGRLKE 736



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 4/211 (1%)

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA---DQA 353
           P    +D  +SAY  +G+  +A++    MI     P+++  NT+L    +  ++     A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEITYNSLIS 412
            E+F+ +  +G   NV ++N + +     G    ALGM+  M+S+  + PD +TYN+++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            + + G + +   LL+DM+     P  ++YN ++ G+CK   + E+ +++  M +    P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +  TY +LI G+   G   E +EL +A+ S+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSL 339


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 235/513 (45%), Gaps = 53/513 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LI    +AG+  E L  +  MV+ G   D+V  T L+    ++ K+++    + 
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368

Query: 97  I-LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             L     P+   Y  LI   CKA+ ++ A +VL  +  +  SP+VVT++ +I     RG
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILI--------QATMLE------------------ 189
           +++ A +    +      P V+TY  LI        Q   LE                  
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 190 ---------GQTDKAMKL----------LDEM-------GMCKKGMVGQAFQFVRSLESR 223
                    G+ ++AM L          LD +       G+ K G +  AF+F + L  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD + YN+ +  L  +GK++E +  +TEM + GL+P+  TY+ +I S CR G+T  A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L   K   + P+  +Y+ L++     G ++ A   L+ M+S G  P  + +  +L A
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             ++   D  L+I E + + G   +++ YNT+   L   G   +A  ++ EML  GI PD
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N+LI   C+   +D A      M      P + ++N ++ G     RI E+  VL 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M + G +PN  TY +L  G G    + EAM L
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 223/485 (45%), Gaps = 53/485 (10%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           DV+    LI  + +   +  A+ V + +   G P DV  YN L++GFC+A Q++ A  VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D ++  G  P+V TY   I   C    +E AF +++ ++R+     V+T + L+     +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+  +A  L  EM                  + K G   +    +  + SRG   D+++Y
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+  L   GK +E +  +   +S  L PN VTY++LI +LC+    ++A  VL   +E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK------ 346
           K ++P+  ++  +I+ + K G LD A E+   M   G  P++V Y T++  F K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 347 -----------------------------NGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                                        NG  ++A+ +F+  S  G   +  +Y T+  
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L+ +GD   A     E++ + + PD + YN  I+CLC  G   EA   L +M +   +P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              +YN +I+  C+     +++++L  M     KPN  TY  L+ G+   G   +A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 498 NALVS 502
           N +VS
Sbjct: 648 NEMVS 652



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 210/463 (45%), Gaps = 23/463 (4%)

Query: 35  VKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           VK  +F+   L+    + GK +E++   +    +G   D V  T LI   F+      A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 93  RV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +   E++++   PD   YN  I+  C   + + A   L  +R+ G  PD  TYN MI S 
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C +G    A K+  ++   + KP +ITY  L+      G  +KA  LL+E  M   G   
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE--MVSAGFSP 657

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            +    R L++        S +  L  +L++ +W         M++ GL  ++  Y+ L+
Sbjct: 658 SSLTHRRVLQA-------CSQSRRLDVILDIHEW---------MMNAGLHADITVYNTLL 701

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC  G T  A  VL      G+ PD  +++ LI  +CK   LD A      M+     
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+I  +NT+L      G   +A  +  ++   G  PN  +Y+ + +      +K+ A+ +
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM+ KG  P   TYN+LIS   + GM+ +A  L  DM+     PT  +Y+I++ G+ +
Sbjct: 822 YCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSR 881

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG--WRAE 492
            R   E  + L  M EKG  P++ T   +       G  W+A+
Sbjct: 882 IRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQ 924



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 18/462 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  +I    + G  D++  +   M   G  P+VV    LI  FF+ +  + A+ V  ++L
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  + + F  ++L++G  +  +IE A  +       G S D V Y  +I  L   G + 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AFK   +L+  N  P  + Y + I    + G+  +A   L EM                
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C+KG   +A + +  ++    +P++I+YN L+  L   G  E+ + L+ EM+S G  
Sbjct: 597 VSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T+  ++ +  +  + +  +D+       GL  D   Y+ L+   C  G    A   
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+  G  PD + +N ++   CK+ + D A   + ++      PN++++NT+   L S
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  ++ EM   G+EP+ +TY+ L +   +     EA+ L  +M    F P V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +I  F K   + ++ E+   M ++G  P   TY +L+ G
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 35/400 (8%)

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           ++   D  + NAL+   C+   + L    +  LRS    P  V YNI++ +L       +
Sbjct: 67  RFRPADPASLNALLYSHCR---LRLLRPAIALLRSS--RPTTVAYNILLAALSDHAHAPA 121

Query: 160 AFKVFDQLLRDNCKPTV----ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
                  +L + CK  V    +T   L+      GQ D A  L D  G            
Sbjct: 122 -------VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG------------ 162

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            + +L       DVI +N L+     +G       +   M ++GL  +VV Y+ L++  C
Sbjct: 163 GIHAL-------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G+ + A  VL   KE G+ P+  +Y P I  YC+   ++ A +  + M+ +G L D+V
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             + ++A  C++G   +A  +F ++  VG  PN  +Y T+  +L  +G     L ++ EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S+G+  D +TY +L+  L + G  DE    L    S    P  ++Y ++I   CK   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +E+ +VL  M EK   PN  T+  +I G    G   +A E
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 22/386 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L +   P   AYN L++          A  VL  +  RG   D VT N ++  LC  G +
Sbjct: 95  LLRSSRPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A  + D+    +    VI +  LI      G T  A+ + D M               
Sbjct: 152 DAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM--------------- 195

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               ++G   DV+ YN L+      G+ +    ++  M   G++PNV TY+  I   CR 
Sbjct: 196 ---TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E+A D+       G+  D  +   L++  C+DGR   A      M   G  P+ V Y
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++ +  K G   + L +  ++   G   ++ +Y  +   L   G        +   LS
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             + P+ +TY  LI  LC+   VDEA  +L++ME     P V++++ +I GF K   +++
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
           + E    M E+G  PN  TY  LI+G
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDG 458



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 18/255 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + D  L   E M+  G   D+ +   L++       + KA  V+E +   G  PD   +N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI G CK++ ++ A     ++  +  SP++ T+N ++G L S G I  A  V  ++ + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             +P  +TY IL      +    +AM+L  EM                    K GM+ QA
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  + ++ RG  P   +Y++L+     +    E +K + +M  +G  P+  T S +  +
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 274 LCRDGKTEDAVDVLR 288
             + G T  A  +L+
Sbjct: 914 FSKPGMTWQAQRLLK 928



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E++     MV  G  P V     LI  F +     +A  + + ++K G  P    Y+ L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           SG+ +        K L  ++ +GFSP   T + +  +    GM   A ++   L R
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 235/513 (45%), Gaps = 53/513 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LI    +AG+  E L  +  MV+ G   D+V  T L+    ++ K+++    + 
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368

Query: 97  I-LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             L     P+   Y  LI   CKA+ ++ A +VL  +  +  SP+VVT++ +I     RG
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILI--------QATMLE------------------ 189
           +++ A +    +      P V+TY  LI        Q   LE                  
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 190 ---------GQTDKAMKL----------LDEM-------GMCKKGMVGQAFQFVRSLESR 223
                    G+ ++AM L          LD +       G+ K G +  AF+F + L  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD + YN+ +  L  +GK++E +  +TEM + GL+P+  TY+ +I S CR G+T  A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L   K   + P+  +Y+ L++     G ++ A   L+ M+S G  P  + +  +L A
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             ++   D  L+I E + + G   +++ YNT+   L   G   +A  ++ EML  GI PD
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N+LI   C+   +D A      M      P + ++N ++ G     RI E+  VL 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M + G +PN  TY +L  G G    + EAM L
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 223/485 (45%), Gaps = 53/485 (10%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           DV+    LI  + +   +  A+ V + +   G P DV  YN L++GFC+A Q++ A  VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D ++  G  P+V TY   I   C    +E AF +++ ++R+     V+T + L+     +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+  +A  L  EM                  + K G   +    +  + SRG   D+++Y
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+  L   GK +E +  +   +S  L PN VTY++LI +LC+    ++A  VL   +E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK------ 346
           K ++P+  ++  +I+ + K G LD A E+   M   G  P++V Y T++  F K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 347 -----------------------------NGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                                        NG  ++A+ +F+  S  G   +  +Y T+  
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L+ +GD   A     E++ + + PD + YN  I+CLC  G   EA   L +M +   +P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              +YN +I+  C+     +++++L  M     KPN  TY  L+ G+   G   +A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 498 NALVS 502
           N +VS
Sbjct: 648 NEMVS 652



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 18/462 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  +I    + G  D++  +   M   G  P+VV    LI  FF+ +  + A+ V  ++L
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  + + F  ++L++G  +  +IE A  +       G S D V Y  +I  L   G + 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AFK   +L+  N  P  + Y + I    + G+  +A   L EM                
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C+KG   +A + +  ++    +P++I+YN L+  L   G  E+ + L+ EM+S G  
Sbjct: 597 VSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T+  ++ +  +  + +  +D+       GL  D   Y+ L+   C  G    A   
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+  G  PD + +N ++   CK+ + D A   + ++      PN++++NT+   L S
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  ++ EM   G+EP+ +TY+ L +   +     EA+ L  +M    F P V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +I  F K   + ++ E+   M ++G  P   TY +L+ G
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 194/427 (45%), Gaps = 21/427 (4%)

Query: 35  VKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           VK  +F+   L+    + GK +E++   +    +G   D V  T LI   F+      A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 93  RV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +   E++++   PD   YN  I+  C   + + A   L  +R+ G  PD  TYN MI S 
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C +G    A K+  ++   + KP +ITY  L+      G  +KA  LL+E  M   G   
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE--MVSAGFSP 657

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            +    R L++        S +  L  +L++ +W         M++ GL  ++  Y+ L+
Sbjct: 658 SSLTHRRVLQA-------CSQSRRLDVILDIHEW---------MMNAGLHADITVYNTLL 701

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC  G T  A  VL      G+ PD  +++ LI  +CK   LD A      M+     
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+I  +NT+L      G   +A  +  ++   G  PN  +Y+ + +      +K+ A+ +
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM+ KG  P   TYN+LIS   + GM+ +A  L  DM+     PT  +Y+I++ G+  
Sbjct: 822 YCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYD 881

Query: 452 TRRINES 458
             R  +S
Sbjct: 882 LAREQKS 888



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 35/400 (8%)

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           ++   D  + NAL+   C+   + L    +  LRS    P  V YNI++ +L       +
Sbjct: 67  RFRPADPASLNALLYSHCR---LRLLRPAIALLRSS--RPTTVAYNILLAALSDHAHAPA 121

Query: 160 AFKVFDQLLRDNCKPTV----ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
                  +L + CK  V    +T   L+      GQ D A  L D  G            
Sbjct: 122 -------VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGG----------- 163

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            + +L       DVI +N L+     +G       +   M ++GL  +VV Y+ L++  C
Sbjct: 164 -IHAL-------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G+ + A  VL   KE G+ P+  +Y P I  YC+   ++ A +  + M+ +G L D+V
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             + ++A  C++G   +A  +F ++  VG  PN  +Y T+  +L  +G     L ++ EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S+G+  D +TY +L+  L + G  DE    L    S    P  ++Y ++I   CK   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +E+ +VL  M EK   PN  T+  +I G    G   +A E
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 22/386 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L +   P   AYN L++          A  VL  +  RG   D VT N ++  LC  G +
Sbjct: 95  LLRSSRPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A  + D+    +    VI +  LI      G T  A+ + D M               
Sbjct: 152 DAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM--------------- 195

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               ++G   DV+ YN L+      G+ +    ++  M   G++PNV TY+  I   CR 
Sbjct: 196 ---TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E+A D+       G+  D  +   L++  C+DGR   A      M   G  P+ V Y
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++ +  K G   + L +  ++   G   ++ +Y  +   L   G        +   LS
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             + P+ +TY  LI  LC+   VDEA  +L++ME     P V++++ +I GF K   +++
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
           + E    M E+G  PN  TY  LI+G
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDG 458



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           ++++   ++ + D  L   E M+  G   D+ +   L++       + KA  V+E +   
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  PD   +NALI G CK++ ++ A     ++  +  SP++ T+N ++G L S G I  A
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
             V  ++ +   +P  +TY IL      +    +AM+L  EM                  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
             K GM+ QA +  + ++ RG  P   +Y++L+    ++ + ++ +
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQ 889


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 235/513 (45%), Gaps = 53/513 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LI    +AG+  E L  +  MV+ G   D+V  T L+    ++ K+++    + 
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368

Query: 97  I-LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             L     P+   Y  LI   CKA+ ++ A +VL  +  +  SP+VVT++ +I     RG
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILI--------QATMLE------------------ 189
           +++ A +    +      P V+TY  LI        Q   LE                  
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488

Query: 190 ---------GQTDKAMKL----------LDEM-------GMCKKGMVGQAFQFVRSLESR 223
                    G+ ++AM L          LD +       G+ K G +  AF+F + L  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD + YN+ +  L  +GK++E +  +TEM + GL+P+  TY+ +I S CR G+T  A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L   K   + P+  +Y+ L++     G ++ A   L+ M+S G  P  + +  +L A
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             ++   D  L+I E + + G   +++ YNT+   L   G   +A  ++ EML  GI PD
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N+LI   C+   +D A      M      P + ++N ++ G     RI E+  VL 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M + G +PN  TY +L  G G    + EAM L
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 215/465 (46%), Gaps = 53/465 (11%)

Query: 91  AVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A+ V + +   G P DV  YN L++GFC+A Q++ A  VLD ++  G  P+V TY   I 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
             C    +E AF +++ ++R+     V+T + L+     +G+  +A  L  EM       
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      + K G   +    +  + SRG   D+++Y  L+  L   GK +E +  +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
              +S  L PN VTY++LI +LC+    ++A  VL   +EK ++P+  ++  +I+ + K 
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK-------------------------- 346
           G LD A E+   M   G  P++V Y T++  F K                          
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487

Query: 347 ---------NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
                    NG  ++A+ +F+  S  G   +  +Y T+   L+ +GD   A     E++ 
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + + PD + YN  I+CLC  G   EA   L +M +   +P   +YN +I+  C+     +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++++L  M     KPN  TY  L+ G+   G   +A  L N +VS
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 210/463 (45%), Gaps = 23/463 (4%)

Query: 35  VKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           VK  +F+   L+    + GK +E++   +    +G   D V  T LI   F+      A 
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 93  RV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           +   E++++   PD   YN  I+  C   + + A   L  +R+ G  PD  TYN MI S 
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C +G    A K+  ++   + KP +ITY  L+      G  +KA  LL+E  M   G   
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE--MVSAGFSP 657

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            +    R L++        S +  L  +L++ +W         M++ GL  ++  Y+ L+
Sbjct: 658 SSLTHRRVLQA-------CSQSRRLDVILDIHEW---------MMNAGLHADITVYNTLL 701

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             LC  G T  A  VL      G+ PD  +++ LI  +CK   LD A      M+     
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+I  +NT+L      G   +A  +  ++   G  PN  +Y+ + +      +K+ A+ +
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM+ KG  P   TYN+LIS   + GM+ +A  L  DM+     PT  +Y+I++ G+ +
Sbjct: 822 YCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSR 881

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG--WRAE 492
            R   E  + L  M EKG  P++ T   +       G  W+A+
Sbjct: 882 IRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQ 924



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 18/462 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  +I    + G  D++  +   M   G  P+VV    LI  FF+ +  + A+ V  ++L
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  + + F  ++L++G  +  +IE A  +       G S D V Y  +I  L   G + 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AFK   +L+  N  P  + Y + I    + G+  +A   L EM                
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C+KG   +A + +  ++    +P++I+YN L+  L   G  E+ + L+ EM+S G  
Sbjct: 597 VSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T+  ++ +  +  + +  +D+       GL  D   Y+ L+   C  G    A   
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+  G  PD + +N ++   CK+ + D A   + ++      PN++++NT+   L S
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  ++ EM   G+EP+ +TY+ L +   +     EA+ L  +M    F P V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +I  F K   + ++ E+   M ++G  P   TY +L+ G
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 168/389 (43%), Gaps = 21/389 (5%)

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+GF        A  V DR+ ++G   DVV YN ++   C  G +++A  V D +     
Sbjct: 179 IAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P V TYT  I                  +  C+   V +AF     +   G   DV++ 
Sbjct: 236 DPNVATYTPFI------------------VYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + L+  L   G++ E   L  EM   G  PN VTY  LI SL + G+ ++ + +L     
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+  D  +Y  L+    K G+ D   + L + +SD   P+ V Y  ++ A CK  N D+
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDE 397

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A ++  ++ +    PNV +++++ +     G   +A      M  +GI P+ +TY +LI 
Sbjct: 398 AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLID 457

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
              +    D A+ +  DM     +      + ++ G  +  +I E++ +       G   
Sbjct: 458 GFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSL 517

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           +   Y  LI+G+   G    A +    L+
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELM 546



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 18/255 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + D  L   E M+  G   D+ +   L++       + KA  V+E +   G  PD   +N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI G CK++ ++ A     ++  +  SP++ T+N ++G L S G I  A  V  ++ + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             +P  +TY IL      +    +AM+L  EM                    K GM+ QA
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  + ++ RG  P   +Y++L+     +    E +K + +M  +G  P+  T S +  +
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 274 LCRDGKTEDAVDVLR 288
             + G T  A  +L+
Sbjct: 914 FSKPGMTWQAQRLLK 928



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 37/149 (24%)

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD----- 421
           P   +YN + +AL    D   A  +++EM  +G+  D +T N+L++ LCR+G VD     
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 422 -----------EAVGLLVDMESTRFRPT------------------VISYNIIILGFCKT 452
                       + G L  ++   F  T                  V+ YN ++ GFC+ 
Sbjct: 158 ADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLI 481
            +++ +  VL  M E G  PN  TY   I
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFI 246



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E++     MV  G  P V     LI  F +     +A  + + ++K G  P    Y+ L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           SG+ +        K L  ++ +GFSP   T + +  +    GM   A ++   L R
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 246/509 (48%), Gaps = 31/509 (6%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF  L+    RAGK   ++  ++ M  +GC PD+ +C   +       + +KA+   E +
Sbjct: 165 QFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERM 224

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G +PDV  YN LI G C A +I  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 225 RRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRV 284

Query: 158 ESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG--- 203
              + + +++  D    P  ITY +LI      G  D+A+  L          D++G   
Sbjct: 285 AEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSA 344

Query: 204 ----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C  G + +A + +  + S+GC+PDV++Y+ ++     +G+ ++  K+M  M   G
Sbjct: 345 IVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNG 404

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PN VT++ L++ LC+ GK+ +A ++L  ++E+  TP   +Y  ++  + ++G+L  + 
Sbjct: 405 CKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESC 464

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +  M+  G  P  V  N ++ A CK     +A +  E+    GC  NV ++ T+    
Sbjct: 465 DVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGF 524

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   AL ++ +M      PD +TY  ++  L R G + EA  L+  M +    PT 
Sbjct: 525 SRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTP 584

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y  +I  +C+   + + + +L  M  K  +   + Y  +IE +   G  +EA  L + 
Sbjct: 585 VTYRTVIHRYCEKGAVEDLLNLLDKMLTK--QGFSSAYNQVIEKLCAFGKLSEAYNLLSK 642

Query: 500 LVSMHA--------ISRDTFKRLNRTFPL 520
           ++   +        I  D+F  LNR  PL
Sbjct: 643 VLRSASKRDAQTCHILMDSF--LNRGLPL 669



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 222/468 (47%), Gaps = 22/468 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV  + E       +  D     +  LIK    A +  E+L  I SM+ NGC PD +   
Sbjct: 213 RVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYF 272

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRS 134
            ++    +E++  +   ++E +       PD   YN LI G  K    + A   L     
Sbjct: 273 TVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEG 332

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           + F  D V Y+ ++ S C  G +  A ++  +++   C+P V+TY+ ++           
Sbjct: 333 KRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVD---------- 382

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C+ G + QA + ++ +   GC+P+ +++  LL  L  +GK  E  +L+ +
Sbjct: 383 --------GFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNK 434

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
                  P+ +TYS+++    R+GK  ++ DV+    +KG  P A   + LI A CK+ +
Sbjct: 435 SEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQK 494

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
              A +F++   S GC  ++VN+ T++  F + G+ + AL + + +      P+V +Y  
Sbjct: 495 PARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTV 554

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +  AL   G    A  ++ +ML++G+ P  +TY ++I   C  G V++ + LL  M + +
Sbjct: 555 VVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQ 614

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
              +  +YN +I   C   +++E+  +L+ +     K +  T  +L++
Sbjct: 615 GFSS--AYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMD 660



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 173/372 (46%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V +  +  ++      G+  E+   I  M++ GC+PDVV  + ++  F +  + ++A 
Sbjct: 335 FRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQAR 394

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K G +P+   + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 395 KMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGF 454

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G +  +  V  Q+L+    PT +   +LI A                  +CK+    
Sbjct: 455 RREGKLVESCDVVMQMLQKGFFPTAVEINLLIHA------------------LCKEQKPA 496

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F+   +S+GC  +V+++  ++      G  E    L+ +M      P+VVTY++++
Sbjct: 497 RAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVV 556

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L R GK ++A  ++     +GL P   +Y  +I  YC+ G ++  +  LD M++    
Sbjct: 557 DALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQGF 616

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                YN ++   C  G   +A  +  K+       +  + + +  +  + G  +++  +
Sbjct: 617 SSA--YNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSFLNRGLPLQSYNV 674

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 675 ACRMFQRNLIPD 686



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 36/226 (15%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +++ L R    + A  V+R    +G+      +  L+ +Y + G+L  A+  L  M  DG
Sbjct: 134 MLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDG 193

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PDI   N  +      G  D+ALE  E++  VG                         
Sbjct: 194 CAPDICICNVAVNVLVVAGRVDKALEFAERMRRVG------------------------- 228

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
                     ++PD +TYN LI  LC    + EA+ ++  M      P  ISY  ++   
Sbjct: 229 ----------VDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFL 278

Query: 450 CKTRRINESIEVLAAMF-EKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           CK +R+ E   +L  M  + G  P++ TY +LI G+   G   EA+
Sbjct: 279 CKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEAL 324


>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 696

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 238/487 (48%), Gaps = 19/487 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI  S RAG  D +    + M A+GC+PD      L+    +    ++AVR++  +E
Sbjct: 191 YNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQME 250

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+VF Y  L+ GFC A ++E A ++LD+++ +G +P   TY  ++  +      +
Sbjct: 251 GEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERD 310

Query: 159 SAFKVF-DQLLRDNCKPTVITYTILI---------QATMLEGQTDKAMKLLDE------M 202
            A+++  D L  +        +T+L          +A   E +      LLD       M
Sbjct: 311 KAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVM 370

Query: 203 GMCKKGM-VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K + V    + + S    G  P    Y M++++LLN   + +    +  M+ +GL 
Sbjct: 371 SCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLL 430

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +V++Y+++I    + G  + A ++++  ++KG  P+  +++ LIS Y K G +  A   
Sbjct: 431 SSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVV 490

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  ++  G +PDI+ + +++   C     D A   FE++++ G  PN  +YN +   L S
Sbjct: 491 LKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCS 550

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G   +A+ ++++M   G+ PD  ++N+LI   CR   VD+A  +  DM      P   +
Sbjct: 551 AGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYT 610

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCK-PNETTYVLLIEGIGYGGWRAEAMELANAL 500
           YN +I   C  RR+N++ E+L A    GC   N  +Y  ++  +   G  +EA EL +  
Sbjct: 611 YNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKY 670

Query: 501 VSMHAIS 507
           +S +A S
Sbjct: 671 LSRNAQS 677



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 129/282 (45%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            + ++G V  + + V  +   GC+        L+ +   +G      ++  +M   GL P
Sbjct: 127 ALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRP 186

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +   Y+ LI++  R G  + A    +     G  PD ++Y+ L+   C+ G +D A+  +
Sbjct: 187 STAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLV 246

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M  +G  P++  Y  ++  FC  G  ++A  + +K+ + G  P+ ++Y T+   ++  
Sbjct: 247 RQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRC 306

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            ++ +A  M+S+ L           ++++ CL +  M  EAV     M +  +     ++
Sbjct: 307 LERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAF 366

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            I++    K   +++  E+L +  + G  P    Y+++I+ +
Sbjct: 367 GIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSL 408



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +  ALW  G  + +  +++E+   G E  E    +L+    R G+   A  + V M   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             RP+   YN +I    +   ++ +      M   GC+P+  TY  L+ G+   G   EA
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242

Query: 494 MELANAL--------VSMHAISRDTF---KRLNRTFPLLDVYKE 526
           + L   +        V  + +  D F    R+   F +LD  KE
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE 286


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 210/430 (48%), Gaps = 21/430 (4%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
           A K +  L  IE M   G KP+      +I    +  K  +A RV+ E++ +   PD   
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI GFCK   +  A ++ D ++ R  SPD +TY  +I  LC  G +  A K+F +++
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
               +P  +TYT LI                   G CK+G + +AF     +   G  P+
Sbjct: 321 CKRLEPDEVTYTALID------------------GYCKEGKMKEAFSLHNQMLQMGLTPN 362

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++Y  L   L   G+ +   +L+ EM  +GLE N+ TY+ L++ LC+ G  + AV +++
Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  G  PDA +Y  L+ AYCK   +  A E L  M+     P +V +N ++  FC +G
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 482

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE-MLSKGIEPDEITY 407
             +   ++ + + + G  PN ++YN++    +   + +RA   I   M +KG+ PD  TY
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQ-YCIRNNMRATTEIYRGMCAKGVVPDGNTY 541

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI   C+   + EA  L  DM    F  TV SYN +I GF K ++  E+ E+   M  
Sbjct: 542 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601

Query: 468 KGCKPNETTY 477
           +G   +   Y
Sbjct: 602 EGLVADREIY 611



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 181/361 (50%), Gaps = 18/361 (4%)

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E   K+++ ++ +G  P+  TYN +I  LC  G +  A +V  +++ +   P  + YT L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I                   G CK G V  A++    ++ R   PD I+Y  ++  L   
Sbjct: 265 ID------------------GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 306

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G+  E +KL  EM+ + LEP+ VTY+ LI   C++GK ++A  +     + GLTP+  +Y
Sbjct: 307 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 366

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
             L    CK G +D A E L  M   G   +I  YN+++   CK GN DQA+++ + +  
Sbjct: 367 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 426

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            G  P+  +Y T+  A   S + +RA  ++ +ML + ++P  +T+N L++  C  GM+++
Sbjct: 427 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 486

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
              LL  M      P   +YN +I  +C    +  + E+   M  KG  P+  TY +LI+
Sbjct: 487 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 546

Query: 483 G 483
           G
Sbjct: 547 G 547



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 18/378 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK  E+   +  M++ G  PD V+ T LI  F +    + A R+ + ++K    PD  
Sbjct: 235 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 294

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y A+I G C+  ++  A+K+   +  +   PD VTY  +I   C  G ++ AF + +Q+
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L+    P ++TYT L       G+ D A +LL EM                 G+CK G +
Sbjct: 355 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 414

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA + ++ +E  G  PD ++Y  L+       +     +L+ +M+ R L+P VVT+++L
Sbjct: 415 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 474

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C  G  ED   +L+   EKG+ P+A +Y+ LI  YC    +    E    M + G 
Sbjct: 475 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 534

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +PD   YN ++   CK  N  +A  +   +   G    VSSYN +    +     + A  
Sbjct: 535 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594

Query: 391 MISEMLSKGIEPDEITYN 408
           +  +M  +G+  D   YN
Sbjct: 595 LFEQMRREGLVADREIYN 612



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 166/332 (50%), Gaps = 11/332 (3%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A K+FD++L          Y +LI             + LD + +  KG      + 
Sbjct: 162 VSFARKLFDKML---------NYGLLISVDSCNLFISHLSEDLDGIKIALKG--EWVLKL 210

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +  ++ +G +P+  +YN ++  L   GK  E E+++ EMIS G+ P+ V Y+ LI   C+
Sbjct: 211 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 270

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G    A  +    +++ ++PD  +Y  +I   C+ GR+  A +    M+     PD V 
Sbjct: 271 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 330

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  ++  +CK G   +A  +  ++  +G  PN+ +Y  +   L   G+   A  ++ EM 
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 390

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            KG+E +  TYNSL++ LC+ G +D+AV L+ DME   F P  ++Y  ++  +CK+R + 
Sbjct: 391 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 450

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            + E+L  M ++  +P   T+ +L+ G    G
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 482



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 19/339 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  +  LI    + GK  E+      M+  G  P++V  T L     +  + + A  ++ 
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+  K  E +++ YN+L++G CKA  I+ A K++  +   GF PD VTY  ++ + C   
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A ++  Q+L    +PTV+T+ +L+                   G C  GM+    +
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMN------------------GFCMSGMLEDGEK 489

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            ++ +  +G  P+  +YN L++            ++   M ++G+ P+  TY+ILI   C
Sbjct: 490 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +    ++A  + R    KG      SY+ LI  + K  +   A E  + M  +G + D  
Sbjct: 550 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 609

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            YN         G  +  LE+ ++  +     ++ + NT
Sbjct: 610 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 42/260 (16%)

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDG-------KTEDAVDVLRAAKEKGLTPDAY 300
             KL  +M++ GL  +V + ++ IS L  D        K E  + ++   + KGL P+ Y
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ +I   CK G++  A   L  MIS+G  PD V Y T++  FCK GN           
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN----------- 273

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
                   VSS                A  +  EM  + I PD ITY ++I  LC+ G V
Sbjct: 274 --------VSS----------------AYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 309

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            EA  L  +M   R  P  ++Y  +I G+CK  ++ E+  +   M + G  PN  TY  L
Sbjct: 310 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 369

Query: 481 IEGIGYGGWRAEAMELANAL 500
            +G+   G    A EL + +
Sbjct: 370 ADGLCKCGEVDTANELLHEM 389



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)

Query: 305 LISAYCKDGRLDLAIEF----LDYMISDGCLPDIVNYNTILAAFCKNGNA-------DQA 353
           LI  +  +  LD+ + F     D M++ G L  + + N  ++   ++ +        +  
Sbjct: 148 LIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWV 207

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L++ E++   G  PN  +YN +   L  +G    A  ++ EM+S+GI PD + Y +LI  
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            C+ G V  A  L  +M+  +  P  I+Y  +I G C+T R+ E+ ++   M  K  +P+
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           E TY  LI+G    G   EA  L N ++ M
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQM 357


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 219/445 (49%), Gaps = 24/445 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R G+ D+ L  ++ +   G KPD  +   +I    +  +  +A +++  + K+G  PD  
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  +ISGFCK   +  A K+ D +R +   PD+VTY  +I  +C  G +  A ++F+++
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L    +P  +TYT LI                   G CK G + +AF     +  +G  P
Sbjct: 409 LVKGLEPDEVTYTALID------------------GYCKAGEMKEAFSVHNQMVQKGLTP 450

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++Y  L   L   G+ +   +L+ EM  +GL+PNV TY+ +++ LC+ G  E  V ++
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLM 510

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 G  PD  +Y  L+ AYCK G +  A E L  M++    P +V +N ++  FC +
Sbjct: 511 EEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMS 570

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE-MLSKGIEPDEIT 406
           G  +    + E + + G  PN +++N++    +   + +RA   I + M  +G+ PD  T
Sbjct: 571 GMLEDGERLIEWMLEKGIMPNATTFNSLMKQ-YCIKNNMRATTEIYKAMHDRGVMPDSNT 629

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN LI   C+   + EA  L  +M    +  T  +Y+ +I GF K ++  E+ ++   M 
Sbjct: 630 YNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689

Query: 467 EKGCKPNETTYVLLIEGIGY--GGW 489
           + G    +  Y + ++ + Y  G W
Sbjct: 690 KHGLVAEKDIYDIFVD-VNYEEGNW 713



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 209/416 (50%), Gaps = 19/416 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV +Y  ++SG+C+  +++   K++D L+ +G  PD   YN +I  LC  G +  A ++
Sbjct: 275 PDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL 334

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              + +    P  + YT +I                   G CK G V  A +    +  +
Sbjct: 335 LRGMRKWGVFPDNVVYTTVIS------------------GFCKLGNVSAACKLFDEMRRK 376

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD+++Y  ++  +   GK  E  ++  EM+ +GLEP+ VTY+ LI   C+ G+ ++A
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             V     +KGLTP+  +Y  L    CK+G +D+A E L  M   G  P++  YNTI+  
Sbjct: 437 FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK GN +Q +++ E++   G  P+  +Y T+  A    G+  +A  ++  ML+K ++P 
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+N L++  C  GM+++   L+  M      P   ++N ++  +C    +  + E+  
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYK 616

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HAISRDTFKRLNRTF 518
           AM ++G  P+  TY +LI+G        EA  L   +V   ++++  T+  L R F
Sbjct: 617 AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 190/378 (50%), Gaps = 17/378 (4%)

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
           C    I++A KV +     G   + V+ NI++  LC  G +  A  +  Q+      P V
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRS 219
           ++Y +++      G+ DK +KL+DE+                  +CK G V +A Q +R 
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           +   G  PD + Y  ++     +G      KL  EM  + + P++VTY+ +I  +C+ GK
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
             +A ++      KGL PD  +Y  LI  YCK G +  A    + M+  G  P++V Y  
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +    CKNG  D A E+  ++S  G  PNV +YNT+ + L   G+  + + ++ EM   G
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
             PD ITY +L+   C+ G + +A  LL  M + R +PT++++N+++ GFC +  + +  
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 460 EVLAAMFEKGCKPNETTY 477
            ++  M EKG  PN TT+
Sbjct: 578 RLIEWMLEKGIMPNATTF 595



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 167/351 (47%), Gaps = 19/351 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           ++GK  E+      M+  G +PD V  T LI  + +  +  +A  V  ++++K   P+V 
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y AL  G CK  +I++AN++L  +  +G  P+V TYN ++  LC  G IE   K+ +++
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  ITYT L+ A                   CK G + +A + +R + ++  QP
Sbjct: 514 DLAGFYPDTITYTTLMDA------------------YCKMGEMAKAHELLRIMLNKRLQP 555

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            ++++N+L+      G  E+GE+L+  M+ +G+ PN  T++ L+   C         ++ 
Sbjct: 556 TLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIY 615

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +A  ++G+ PD+ +Y+ LI  +CK   +  A      M+  G       Y+ ++  F K 
Sbjct: 616 KAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKR 675

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
               +A ++FE++   G       Y+      +  G+    L +  E +++
Sbjct: 676 KKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 7/306 (2%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL-LNMGKWEEGEKLMTEMISRGLEP 262
           + + G V +A +    L   G    V S N+ L  L  N    +   K+  E    G+  
Sbjct: 181 LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCW 240

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N V+ +I++  LC+ GK  +A ++L    ++G  PD  SY  ++S YC+ G LD  ++ +
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D +   G  PD   YN I+   CKNG   +A ++   +   G  P+   Y T+ S     
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G+   A  +  EM  K I PD +TY S+I  +C+ G + EA  +  +M      P  ++Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +I G+CK   + E+  V   M +KG  PN  TY  L +G+   G     +++AN L  
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG----EIDVANEL-- 474

Query: 503 MHAISR 508
           +H +SR
Sbjct: 475 LHEMSR 480



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 19/321 (5%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI    +AG+  E+      MV  G  P+VV  T L     +  + + A  ++ 
Sbjct: 417 EVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLH 476

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + + G +P+V+ YN +++G CK   IE   K+++ +   GF PD +TY  ++ + C  G
Sbjct: 477 EMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMG 536

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  A ++   +L    +PT++T+ +L+                   G C  GM+    +
Sbjct: 537 EMAKAHELLRIMLNKRLQPTLVTFNVLMN------------------GFCMSGMLEDGER 578

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            +  +  +G  P+  ++N L++            ++   M  RG+ P+  TY+ILI   C
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           +    ++A  + +   EKG +  A +YD LI  + K  +   A +  + M   G + +  
Sbjct: 639 KARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKD 698

Query: 336 NYNTILAAFCKNGNADQALEI 356
            Y+  +    + GN +  LE+
Sbjct: 699 IYDIFVDVNYEEGNWEITLEL 719


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 234/494 (47%), Gaps = 55/494 (11%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+  G   +V     L+K   +  +  KAV ++ E+      PDVF+YN +I GFC+  +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A ++ + ++  G S  +VT+ I+I + C  G ++ A     ++     +  ++ YT 
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI+     G+ D+   L DE+                 G CK G + +A +    +  RG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +P+V +Y  L+  L  +GK +E  +L+  MI +  EPN VTY+I+I+ LC+DG   DAV
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTILA 342
           +++   K++   PD  +Y+ L+   C  G LD A + L  M+ D     PD+++YN ++ 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 343 AFCKN-----------------------------------GNADQALEIFEKLSDVGCPP 367
             CK                                    G+ ++A+E+++++SD     
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N  +Y  M      +G    A G++ +M    ++P    YN L+S LC++G +D+A  L 
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+     P V+S+NI+I G  K   I  +  +L  M   G  P+  TY  LI      
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612

Query: 488 GWRAEAMELANALV 501
           G+  EA+   + +V
Sbjct: 613 GYLDEAISFFDKMV 626



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 237/488 (48%), Gaps = 30/488 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +K + R+   GK   ++  +  M  N   PDV     +I+ F + ++  KA+ +   ++
Sbjct: 148 LLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G    +  +  LI  FCKA +++ A   L  ++  G   D+V Y  +I   C  G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
               +FD++L     P  ITY  LI+                  G CK G + +A +   
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIR------------------GFCKLGQLKEASEIFE 306

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  RG +P+V +Y  L+  L  +GK +E  +L+  MI +  EPN VTY+I+I+ LC+DG
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVN 336
              DAV+++   K++   PD  +Y+ L+   C  G LD A + L  M+ D     PD+++
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426

Query: 337 YNTILAAFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           YN ++   CK     QAL+I++ L + +G    V++ N + ++   +GD  +A+ +  ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQI 485

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
               I  +  TY ++I   C+ GM++ A GLL  M  +  +P+V  YN ++   CK   +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF---K 512
           +++  +   M      P+  ++ ++I+G    G    A  L   + S   +S D F   K
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSK 604

Query: 513 RLNRTFPL 520
            +NR   L
Sbjct: 605 LINRFLKL 612



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 208/416 (50%), Gaps = 22/416 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ--ERKSNKAVRVMEILEK 100
           LI    +AGK DE++ F++ M   G + D+V+ T LI+ F    E    KA+   E+LE+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL-FDEVLER 276

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P    YN LI GFCK  Q++ A+++ + +  RG  P+V TY  +I  LC  G  + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            ++ + ++  + +P  +TY I+I     +G    A+++++ M                 G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 204 MCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           +C KG + +A + +  +  +S    PDVISYN L+  L    +  +   +   ++ +   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VT +IL++S  + G    A+++ +   +  +  ++ +Y  +I  +CK G L++A   
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M      P + +YN +L++ CK G+ DQA  +FE++      P+V S+N M      
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +GD   A  ++  M   G+ PD  TY+ LI+   + G +DEA+     M  + F P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 206/441 (46%), Gaps = 22/441 (4%)

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           AV V +     G    FA N L++   ++   ELA     ++       + V+ + ++  
Sbjct: 57  AVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
                    AF V   +L+      V  + IL++                  G+C+    
Sbjct: 117 YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK------------------GLCRNLEC 158

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G+A   +R +      PDV SYN ++R      + E+  +L  EM   G   ++VT+ IL
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + C+ GK ++A+  L+  K  GL  D   Y  LI  +C  G LD      D ++  G 
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P  + YNT++  FCK G   +A EIFE + + G  PNV +Y  +   L   G    AL 
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++ M+ K  EP+ +TYN +I+ LC+DG+V +AV ++  M+  R RP  I+YNI++ G C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 451 KTRRINESIEVLAAMFEKG--CKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMHAIS 507
               ++E+ ++L  M +      P+  +Y  LI G+       +A+++ + LV  + A  
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 508 RDTFK-RLNRTFPLLDVYKEI 527
           R T    LN T    DV K +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAM 479



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 191/404 (47%), Gaps = 25/404 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI+   + G+  E+    E M+  G +P+V   T LI       K+ +A++++ ++ EK 
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+   YN +I+  CK   +  A ++++ ++ R   PD +TYNI++G LC++G ++ A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 162 KVFDQLLRDN--CKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           K+   +L+D+    P VI+Y  LI     E +  +A+ + D +                 
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
              K G V +A +  + +       +  +Y  ++      G     + L+ +M    L+P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V  Y+ L+SSLC++G  + A  +    +     PD  S++ +I    K G +  A   L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G  PD+  Y+ ++  F K G  D+A+  F+K+ D G  P+    +++     S 
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           G+  +    ++E++ K ++ D I  +  ++C   D M + +  +
Sbjct: 648 GETDK----LTELVKKLVDKD-IVLDKELTCTVMDYMCNSSANM 686



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 151/341 (44%), Gaps = 21/341 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-- 100
           +I +  + G   +++  +E M     +PD +    L+     +   ++A +++ ++ K  
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 101 -YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y +PDV +YNALI G CK N++  A  + D L  +  + D VT NI++ S    G +  
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A +++ Q+          TYT +I      G  + A  LL +M                 
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK+G + QA++    ++     PDV+S+N+++   L  G  +  E L+  M   GL P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TYS LI+   + G  ++A+       + G  PDA+  D ++      G  D   E +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657

Query: 323 DYMISDGCLPDIVNYNTILAAFCK-NGNADQALEIFEKLSD 362
             ++    + D     T++   C  + N D A  +     D
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 249/548 (45%), Gaps = 85/548 (15%)

Query: 41  MKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++L   +F  AG   E+L  +  +  +G  P +     L++  F+  + + A  V E + 
Sbjct: 152 LRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMA 211

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P +  +NA+I GFC    + +A+ +L  +   G  P+V +YNI+I   C  G   
Sbjct: 212 ARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSR 271

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AFK+F+++ R  C+PTV+TY IL+     EG+  +A +L DEM                
Sbjct: 272 DAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLI 331

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK----------------- 244
            G  K G + QA    R +++RG  PD  ++N++       G                  
Sbjct: 332 DGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLA 391

Query: 245 -----------W----EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                      W    ++  +L+   I +G   +V  ++ LI++  ++G  E+A ++ R 
Sbjct: 392 DGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRI 451

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CL----------------- 331
             + GL P + +++ LI   C  GRLD A   L++M+S G CL                 
Sbjct: 452 MNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNA 511

Query: 332 ----------------PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                           PD + ++  +   C+    ++A + F +++  G  PN  +YN++
Sbjct: 512 VCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSI 571

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            SAL  +G+   AL +   M   G+ PD  T N LI  LCR+G ++    LL+DM S   
Sbjct: 572 ISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGL 631

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P  ++YN II  +C+ + +N ++  +  M   GC+P+  TY + +  +       +A +
Sbjct: 632 TPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGK 691

Query: 496 LANALVSM 503
           + + LV+M
Sbjct: 692 VLDELVAM 699



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 204/395 (51%), Gaps = 30/395 (7%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
           F   M+A+G   D+++C     +   + + + A  ++    + G P  V  +NALI+ + 
Sbjct: 385 FGSHMLADGM--DMLVC-----RLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYS 437

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTV 176
           K    E A ++   +   G +P   T+N +I  LC++G ++ A  + + ++ +  C  T 
Sbjct: 438 KEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST- 496

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
            ++TI + A+  EG    A+K  D+MG                    G QPD I+++  +
Sbjct: 497 -SFTICLDASFREGNAVCALKCWDDMG------------------KLGLQPDFIAFSAYI 537

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L  +    E  +   EM +RG+ PN  TY+ +IS+LCR G   +A+ + +  ++ GL 
Sbjct: 538 NGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLV 597

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD Y+ + LI   C++G+L++    L  M S+G  PD V YNTI+ A+C+  + + A+  
Sbjct: 598 PDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNF 657

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             K+   GC P++ +YN    +L S+    +A  ++ E+++ G  PD +TYN+L+  +C 
Sbjct: 658 MNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICS 717

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           D ++D A+ L   +    F+P  I+ N+ +  FCK
Sbjct: 718 D-VLDRAMILTGRLIKMAFQPNTITLNVFLSHFCK 751



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 213/464 (45%), Gaps = 30/464 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G   ++    E M  +GC+P VV    L+     E +  +A R+ + + + G
Sbjct: 260 LIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVG 319

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + +   +N LI G+ K  +++ A      +++RG  PD  T+NI+       G      
Sbjct: 320 IQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLV 379

Query: 162 KVFD----QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD---EMGM---------- 204
              D     +L D          +L+     + + D A +LL    E G           
Sbjct: 380 HDHDMFGSHMLADG-------MDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNAL 432

Query: 205 ----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
                K+G+  +AF+  R +   G  P   ++N L+  L N G+ +E + L+  M+S+G 
Sbjct: 433 IAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY 492

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             +  +++I + +  R+G    A+       + GL PD  ++   I+  C+   ++ A +
Sbjct: 493 CLST-SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQ 551

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M + G +P+   YN+I++A C+ GN  +AL++ + +   G  P++ + N +   L 
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLC 611

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G       ++ +M S G+ PD +TYN++I+  CR   ++ A+  +  M +    P + 
Sbjct: 612 REGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIF 671

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +YNI +   C    +N++ +VL  +   GC P+  TY  L++GI
Sbjct: 672 TYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGI 715



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 189/443 (42%), Gaps = 59/443 (13%)

Query: 109 YNAL---ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           Y AL   +  F  A     A  VL R+R  G +P +     ++  L   G + +A+ VF+
Sbjct: 149 YGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFE 208

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++     +P++ T+  +I      G    A  LL  M                 G C  G
Sbjct: 209 EMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFG 268

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
               AF+    +   GC+P V++YN+L+  L + G+  E  +L  EM   G++ N +T++
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFN 328

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPD----------AYSY---------------- 302
           +LI    + G+ + A    R  K +GL PD          AY +                
Sbjct: 329 VLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSH 388

Query: 303 ------DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
                 D L+   C D RLD A E L   I  G    +  +N ++AA+ K G  ++A E+
Sbjct: 389 MLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFEL 448

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL-- 414
           +  ++ +G  P+ S++N +   L + G    A  ++  M+SKG         S   CL  
Sbjct: 449 YRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY----CLSTSFTICLDA 504

Query: 415 -CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
             R+G    A+    DM     +P  I+++  I G C+   +NE+ +  A M  +G  PN
Sbjct: 505 SFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPN 564

Query: 474 ETTYVLLIEGIGYGGWRAEAMEL 496
             TY  +I  +   G   EA++L
Sbjct: 565 NFTYNSIISALCRAGNMTEALKL 587



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 25/335 (7%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKS 88
           L      + F  LI      G+ DE+   +E MV+ G        +C   +   F+E  +
Sbjct: 455 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTIC---LDASFREGNA 511

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             A++  + + K G +PD  A++A I+G C+ + +  A +    + +RG  P+  TYN +
Sbjct: 512 VCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSI 571

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I +LC  G +  A K+   + ++   P + T  ILI                   G+C++
Sbjct: 572 ISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILID------------------GLCRE 613

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +      +  + S G  PD ++YN ++               M +M++ G EP++ TY
Sbjct: 614 GKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTY 673

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +I + SLC +     A  VL      G  PD+ +Y+ L+   C D  LD A+     +I 
Sbjct: 674 NIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSD-VLDRAMILTGRLIK 732

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
               P+ +  N  L+ FCK G   +AL   EKL +
Sbjct: 733 MAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLRE 767



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 2/133 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    RA   + ++ F+  M+A GC+PD+      +         N+A +V++ L 
Sbjct: 638 YNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELV 697

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD   YN L+ G C ++ ++ A  +  RL    F P+ +T N+ +   C +G  +
Sbjct: 698 AMGCPPDSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGK 756

Query: 159 SAFKVFDQLLRDN 171
            A    ++L  D+
Sbjct: 757 RALMWAEKLREDS 769


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 220/439 (50%), Gaps = 26/439 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G+  +   +++ M+  G   D   CT +I  F ++   N+A    +   + G  P++ 
Sbjct: 240 RMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLI 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +++LI+G CK   I+ A ++L+ +  +G+ P+V T+  +I  LC +G  E AF++F +L
Sbjct: 300 NFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 359

Query: 168 LR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +R DN KP V TYT +I     E + ++A  LL  M                 G CK G 
Sbjct: 360 VRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGN 419

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
            G+A++ +  +   G  P++ +YN ++  L   G++ E  KL+   +  GL  + VTY+I
Sbjct: 420 FGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTI 479

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LIS  CR    + A+ +     + GL PD ++Y+ LI+ +C+  +++ + +  +  +  G
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLG 539

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            LP    Y +++  +C++G+   A++ F K+ D GC P+  +Y  + S L +      A 
Sbjct: 540 LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEAC 599

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   M+  G+ P E+T  +L    C+ G  D A  +++ +E    +  + + N +I   
Sbjct: 600 QLYETMIDNGLSPCEVTRVTLAYEYCKQG--DSATAMII-LERLEKKLWIRTVNTLIRKL 656

Query: 450 CKTRRINESIEVLAAMFEK 468
           C  +++     V A  F K
Sbjct: 657 CSEKKVG----VAALFFHK 671



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 224/469 (47%), Gaps = 21/469 (4%)

Query: 36  KETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + T+ M+ + RSF   GK  E++  +  M  +G      +   +I         + A +V
Sbjct: 156 RATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKV 215

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
             E+L++   PD  +Y  ++ G+C+  +I   ++ L  +  RG++ D  T  +MI +   
Sbjct: 216 FDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           +G +  AF  F + ++    P +I ++ LI                   G+CK G + QA
Sbjct: 276 KGFVNRAFWYFKKWVQMGLNPNLINFSSLIN------------------GLCKIGSIKQA 317

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILIS 272
           F+ +  +  +G +P+V ++  L+  L   G  E+  +L  +++ S   +PNV TY+ +I+
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMIN 377

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C++ K   A  +L   KE+GL P+  +Y  LI  +CK G    A E +D M  +G  P
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTP 437

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +I  YN I+   CK G   +A ++  +    G   +  +Y  + S      D  +AL + 
Sbjct: 438 NIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIF 497

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           S M   G++PD  TYN LI+  CR   V+E+  L  +       PT  +Y  +I G+C+ 
Sbjct: 498 SRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRD 557

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             I+ +I+    M + GCKP+  TY  LI G+       EA +L   ++
Sbjct: 558 GHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMI 606


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 217/462 (46%), Gaps = 41/462 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK------------FFQERKSNK 90
           +I    ++   D S+Y+   MV  G  P       L+              FF E K   
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK--- 156

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            ++V+         DV+++  +I G C+A +IE +  +L  LR  GFSP+VV Y  +I  
Sbjct: 157 -IKVV--------LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------- 203
            C +G IE A  +F ++ +        TYT+LI      G   +  ++ ++M        
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 204 ----------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                     +CK G    AF+    +  RG   ++++YN L+  L    K  E  K+M 
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           +M S  + PN++TY+ LI   C  GK   A+ + R  K +GL+P   +Y+ L+S +C+ G
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
               A + +  M   G  P  V Y  ++  F ++ N + A+++   + ++G  P+V +Y+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYS 447

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +       G    A  +   M+ K +EP+E+ YN++I   C++G    A+ L  DME  
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
              P V SY+ +I   CK R++ E+ +++  M + G  P++T
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 201/407 (49%), Gaps = 19/407 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +IK    AG+ ++S   +  +   G  P+VV+ T LI    ++ +  KA  +   + 
Sbjct: 166 FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K+G   + + Y  LI G  K    +   ++ ++++  G  P++ TYN ++  LC  G  +
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTK 285

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            AFKVFD++        ++TY  LI     E + ++A K++D+M                
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM---------------- 329

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
             +S    P++I+YN L+    ++GK  +   L  ++ SRGL P++VTY++L+S  CR G
Sbjct: 330 --KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
            T  A  +++  +E+G+ P   +Y  LI  + +   ++ AI+    M   G +PD+  Y+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYS 447

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++  FC  G  ++A  +F+ + +    PN   YNTM       G   RAL +  +M  K
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            + P+  +Y+ LI  LC++  + EA  L+  M  +   P+    N+I
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 158/299 (52%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C+ G + ++F  +  L   G  P+V+ Y  L+      G+ E+ + L  EM   GL  
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  TY++LI  L ++G  +   ++    +E G+ P+ Y+Y+ +++  CKDGR   A +  
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M   G   +IV YNT++   C+   A++A ++ +++      PN+ +YNT+     S 
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G   +AL +  ++ S+G+ P  +TYN L+S  CR G    A  ++ +ME    +P+ ++Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            I+I  F ++  +  +I++ ++M E G  P+  TY +LI G    G   EA  L  ++V
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 127/312 (40%), Gaps = 54/312 (17%)

Query: 245 WEEGEKLMTEMISRGLEPNVVT--------------------YSILISSLCRDGKTEDAV 284
           +   + L+ ++IS  ++    T                    Y ++I++  +    + ++
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114

Query: 285 DVLRAAKEKGLTP----------------------------------DAYSYDPLISAYC 310
                  +KG  P                                  D YS+  +I   C
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCC 174

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G ++ + + L  +   G  P++V Y T++   CK G  ++A ++F ++   G   N  
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y  +   L+ +G K +   M  +M   G+ P+  TYN +++ LC+DG   +A  +  +M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                   +++YN +I G C+  + NE+ +V+  M      PN  TY  LI+G    G  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354

Query: 491 AEAMELANALVS 502
            +A+ L   L S
Sbjct: 355 GKALSLCRDLKS 366


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 216/453 (47%), Gaps = 20/453 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      F  L++    AG+   +L   + M   GC+P +  C +L+ K  Q      A 
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V   +   G  PD F    +   +C+  ++  A + ++ +   G   ++V Y+ ++   
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G  E A ++ + L R    P V+TYT+L++                  G CK G + 
Sbjct: 264 CGMGWTEDARRILESLQRKGLSPNVVTYTLLVK------------------GYCKDGRME 305

Query: 212 QAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           +A + V+ ++  G    D ++Y M++      G+ ++  ++  EM   G+  N+  Y+ +
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ LC+ G+ E+   VL+  ++ G+ PD YSY+ LI  YC++G +  A E    M+ +G 
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
               + YNT+L  FC     D AL ++  +   G  PN  S +T+   L+ +G   +AL 
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  E L++G+  + IT+N++I+ LC+ G + EA  LL  M+  R  P  ++Y  +  G+C
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K  ++  +  ++  M   G  P+   +   I G
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 230/472 (48%), Gaps = 20/472 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV+ + E       +  +V    +  ++      G  +++   +ES+   G  P+VV  T
Sbjct: 233 RVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYT 292

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRS 134
            L+K + ++ +  +A RV++ +++ G+   D  AY  +I+G+C+  +++ A +V + +R 
Sbjct: 293 LLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD 352

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G   ++  YN MI  LC  G +E   KV  ++     +P   +Y  LI           
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID---------- 402

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C++G + +AF+  R +   G     ++YN LL+   ++   ++  +L   
Sbjct: 403 --------GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ RG+ PN ++ S L+  L + GKTE A+++ +    +GL  +  +++ +I+  CK GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A E LD M    C PD + Y T+   +CK G    A  +  K+  +G  P+V  +N+
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
             +  + +    +   + SEM ++G+ P+ +TY +LI+  C++G + EA  L  +M +  
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             P V   + ++  F K  +++E+  VL  +      P  +   + I+ I +
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 226/530 (42%), Gaps = 60/530 (11%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           +R R+  +   R         V    +  +I    + G+ +E    ++ M   G +PD  
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395

Query: 74  MCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRL 132
               LI  + +E    KA  +  ++ + G       YN L+ GFC  + I+ A ++   +
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
             RG +P+ ++ + ++  L   G  E A  ++ + L       VIT+  +I      G+ 
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            +A +LLD M                 G CK G +G A   +  +E  G  P V  +N  
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +       +W +   + +EM +RGL PN+VTY  LI+  C++G   +A ++       G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI--------------------- 334
            P+ +    L+S + K+G++D A   L  +++   +P                       
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 335 -----VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
                V +N I+   CK+G    A  +FE L +    P+  +Y+++     +SG    A 
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   MLS G+ P+ ITYNSLI  LC+ G +  AV L   ++S    P  I+YN +I  +
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 450 CKTRR----------------INESIEVLAAMFEKGCKPNETTYVLLIEG 483
           CK  +                + E+I++L  M E    PN  TY  LI G
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 865



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 217/485 (44%), Gaps = 74/485 (15%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           +P +V   +L+    + R+ + A  ++  L  + EP +F + A +               
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEP-LFPHLAEVY-------------- 141

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ---- 184
                 R F+   V++++++ +    G + SA  VFD + +  C+P++ +   L+     
Sbjct: 142 ------RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 185 ------ATMLEGQTDKAMKLLDEM-------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
                 A M+ GQ   A  L DE          C+ G V QA +FV  +E  G + ++++
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ ++     MG  E+  +++  +  +GL PNVVTY++L+   C+DG+ E+A  V++  K
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 292 EKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           E G +  D  +Y  +I+ YC+ GR+D A    + M   G   ++  YNT++   CK G  
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++  ++ +++ DVG  P+  SYNT+       G   +A  M   M+  G+    +TYN+L
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTL 435

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           +   C    +D+A+ L   M      P                                 
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              VI++N +I G CK  R+ E+ E+L  M E  C P+  TY  L +G    G    A  
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555

Query: 496 LANAL 500
           L N +
Sbjct: 556 LMNKM 560



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 224/511 (43%), Gaps = 44/511 (8%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  +  +I    + G+ D++      M   G   ++ +   +I    +  +  +  +V
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +E  G  PD ++YN LI G+C+   +  A ++   +   G +   +TYN ++   CS
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
              I+ A +++  +L+    P  I+ + L+      G+T++A+ L  E            
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G + +A + +  ++   C PD ++Y  L      +G+      LM +M 
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+V  ++  I+      +     D+      +GL+P+  +Y  LI+ +CK+G L 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP--------- 367
            A      M+++G  P++   + +++ F K G  D+A  + +KL ++   P         
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 368 -------------NVSSYNTMFS----ALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
                        N  S N M++     L  SG    A  +   + +K   PD  TY+SL
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I      G +DEA  L   M S    P +I+YN +I G CK+ +++ ++ +   +  KG 
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            PN  TY  LI+     G   EA +L   +V
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 195/463 (42%), Gaps = 63/463 (13%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           D++L     M+  G  P+ + C+ L+   F+  K+ +A+ +  E L +    +V  +N +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+G CK  ++  A ++LDR++     PD +TY  +    C  G + +A  + +++     
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
            P+V  +   I    +  Q  K   +  EM                 G CK+G + +A  
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV----------- 264
               + + G  P+V   + L+      GK +E   ++ ++++  + P             
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 265 ---------------VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
                          V ++++I  LC+ G+  DA  +  + + K   PD ++Y  LI   
Sbjct: 686 HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
              G +D A    D M+S G  P+I+ YN+++   CK+G   +A+ +F KL   G  PN 
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YNT+       G    A  +  +M+                    +G ++EA+ LL  
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVE-------------------EGYMEEAIKLLDQ 846

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           M      P  I+Y  +I G+ K+  + E  ++   M  +G  P
Sbjct: 847 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 66/407 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G+  E+   ++ M    C PD +    L   + +  +   A  +M  +E
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P V  +N+ I+G   A Q    N +   + +RG SP++VTY  +I   C  G + 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  ++ +++ +   P V   + L+     EG+ D+A  +L ++                
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 203 ---------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
                                      G+CK G +  A     SL ++   PD  +Y+ L
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +      G  +E   L   M+S GL PN++TY+ LI  LC+ GK   AV++    + KG+
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 296 TPDAYSYDPLISAYCKDGR----------------LDLAIEFLDYMISDGCLPDIVNYNT 339
           +P+  +Y+ LI  YCK+G+                ++ AI+ LD MI +   P+ + Y T
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCT 861

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           ++  + K+GN ++  ++++++   G  P      T +   W   D +
Sbjct: 862 LIHGYIKSGNMEEISKLYDEMHIRGLLP------TNWIGNWKRSDPV 902


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 243/508 (47%), Gaps = 30/508 (5%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF  L+    RAGK   ++  ++ M  +GC PD+ +C   +       + +KA+   E +
Sbjct: 163 QFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERM 222

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            + G +PDV  YN LI G C A +I  A +++  +   G  PD ++Y  ++  LC    +
Sbjct: 223 RRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRV 282

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL----------DEMG---- 203
                + +++      P  +TY +LI      G  D+A+  L          DE+G    
Sbjct: 283 ADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSAT 342

Query: 204 ---MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
               C  G + +A + +  + S+GC+PDV++Y+ ++     +G+ ++  K+M  M   G 
Sbjct: 343 VHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGC 402

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +PN VT++ L++ LC+ GK+ +A ++L  ++E+  TP A +Y  ++  + ++G+L  + +
Sbjct: 403 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCD 462

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            +  M+  G  P  V  N ++ A C       A +  E+    GC  NV ++ T+     
Sbjct: 463 VVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFS 522

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             GD   AL ++ +M      PD +TY  ++  L R G + EA  L+  M +    PT +
Sbjct: 523 RQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPV 582

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y  +I  +C+   + + + +L  M  K  +   + Y  +IE +   G  +EA  L + +
Sbjct: 583 TYRTVIHRYCEKGAVEDLLNLLDKMLAK--EGFSSAYNQVIEKLCAFGKLSEANNLLSKV 640

Query: 501 VSMHA--------ISRDTFKRLNRTFPL 520
           +   +        I  D+F  LNR  PL
Sbjct: 641 LRTASKRDAQTCHILMDSF--LNRGLPL 666



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 196/412 (47%), Gaps = 19/412 (4%)

Query: 86  RKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           R  + A RVM ++ + G P     +  L+  + +A ++  A +VL  ++  G +PD+   
Sbjct: 140 RLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICIC 199

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N+ +  L   G I+ A +  +++ R    P V+TY  LI+                  G+
Sbjct: 200 NMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIK------------------GL 241

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C    +  A + + S+   GC PD ISY  ++  L    +  + + L+  M   G+ P+ 
Sbjct: 242 CGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQ 301

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY++LI  L + G  ++A+  LR ++ K    D   Y   + ++C +GR+  A E +  
Sbjct: 302 VTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGE 361

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           MIS GC PD+V Y+ ++  FC+ G  DQA ++ + +   GC PN  ++  + + L   G 
Sbjct: 362 MISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGK 421

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  ++++   +   P  ITY+ ++    R+G + E+  +++ M    F PT +  N+
Sbjct: 422 SSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINL 481

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I   C  R+  ++ + +     KGC  N   +  +I G    G    A+ L
Sbjct: 482 LIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSL 533



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 33/340 (9%)

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +VFD++L            +L+  T L     + M+L     M ++GM     QF  
Sbjct: 124 HAPEVFDEML------------VLLSRTRLHDPARRVMRL-----MIRRGMPRGTRQFAH 166

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +         +SY+         GK     +++  M   G  P++   ++ ++ L   G
Sbjct: 167 LM---------LSYS-------RAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAG 210

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + + A++     +  G+ PD  +Y+ LI   C   R+  A+E +  M+ +GCLPD ++Y 
Sbjct: 211 RIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYF 270

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T+++  CK         + E++SD G  P+  +YN +   L   G    AL  + E   K
Sbjct: 271 TVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGK 330

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
               DE+ Y++ +   C +G + EA  ++ +M S   RP V++Y+ ++ GFC+   ++++
Sbjct: 331 RFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQA 390

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
            +++  M++ GCKPN  T+  L+ G+   G  +EA EL N
Sbjct: 391 RKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLN 430



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 171/372 (45%), Gaps = 21/372 (5%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F V E  +   +      G+  E+   I  M++ GC+PDVV  + ++  F +  + ++A 
Sbjct: 332 FRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQAR 391

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++M+ + K G +P+   + AL++G CK  +   A ++L++     ++P  +TY++++   
Sbjct: 392 KMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGF 451

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
              G ++ +  V  Q+L+    PT +   +LI A                  +C +    
Sbjct: 452 RREGKLKESCDVVMQMLQKGFFPTTVEINLLIHA------------------LCNERKPA 493

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A  F+   +S+GC  +V+++  ++      G  E    L+ +M      P+VVTY++++
Sbjct: 494 DAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVV 553

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +L R GK ++A  ++     +GL P   +Y  +I  YC+ G ++  +  LD M++    
Sbjct: 554 DALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGF 613

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                YN ++   C  G   +A  +  K+       +  + + +  +  + G  +++  +
Sbjct: 614 SSA--YNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNV 671

Query: 392 ISEMLSKGIEPD 403
              M  + + PD
Sbjct: 672 ACRMFQRNLIPD 683



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 172/366 (46%), Gaps = 28/366 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G+ D++   ++ M  NGCKP+ V  T L+    +  KS++A  ++ +  E++  P   
Sbjct: 383 RIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAI 442

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ ++ GF +  +++ +  V+ ++  +GF P  V  N++I +LC+      A    +Q 
Sbjct: 443 TYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQC 502

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C   V+ +T +I     +G  + A+ LLD+M +  +                   P
Sbjct: 503 QSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNR------------------HP 544

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++Y +++  L   GK +E   L+ +M++RGL P  VTY  +I   C  G  ED +++L
Sbjct: 545 DVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLL 604

Query: 288 RAAKEKGLTPDAYS--YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
               +K L  + +S  Y+ +I   C  G+L  A   L  ++      D    + ++ +F 
Sbjct: 605 ----DKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFL 660

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI---EP 402
             G   Q+  +  ++      P++     + S L  +G+K  A  +I + + +G+     
Sbjct: 661 NRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALAGEKQAAGKLIIKFVERGVNMHNG 720

Query: 403 DEITYN 408
           +E+T N
Sbjct: 721 EEVTVN 726


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 216/453 (47%), Gaps = 20/453 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      F  L++    AG+   +L   + M   GC+P +  C +L+ K  Q      A 
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V   +   G  PD F    +   +C+  ++  A + ++ +   G   ++V Y+ ++   
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G  E A ++ + L R    P V+TYT+L++                  G CK G + 
Sbjct: 264 CGMGWTEDARRILESLQRKGLSPNVVTYTLLVK------------------GYCKDGRME 305

Query: 212 QAFQFVRSLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           +A + V+ ++  G    D ++Y M++      G+ ++  ++  EM   G+  N+  Y+ +
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ LC+ G+ E+   VL+  ++ G+ PD YSY+ LI  YC++G +  A E    M+ +G 
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
               + YNT+L  FC     D AL ++  +   G  PN  S +T+   L+ +G   +AL 
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  E L++G+  + IT+N++I+ LC+ G + EA  LL  M+  R  P  ++Y  +  G+C
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           K  ++  +  ++  M   G  P+   +   I G
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 230/472 (48%), Gaps = 20/472 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RV+ + E       +  +V    +  ++      G  +++   +ES+   G  P+VV  T
Sbjct: 233 RVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYT 292

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRS 134
            L+K + ++ +  +A RV++ +++ G+   D  AY  +I+G+C+  +++ A +V + +R 
Sbjct: 293 LLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD 352

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G   ++  YN MI  LC  G +E   KV  ++     +P   +Y  LI           
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID---------- 402

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C++G + +AF+  R +   G     ++YN LL+   ++   ++  +L   
Sbjct: 403 --------GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ RG+ PN ++ S L+  L + GKTE A+++ +    +GL  +  +++ +I+  CK GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A E LD M    C PD + Y T+   +CK G    A  +  K+  +G  P+V  +N+
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
             +  + +    +   + SEM ++G+ P+ +TY +LI+  C++G + EA  L  +M +  
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
             P V   + ++  F K  +++E+  VL  +      P  +   + I+ I +
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 211/457 (46%), Gaps = 45/457 (9%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           D++L     M+  G  P+ + C+ L+   F+  K+ +A+ +  E L +    +V  +N +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+G CK  ++  A ++LDR++     PD +TY  +    C  G + +A  + +++     
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P+V  +   I    +  Q  K   +  EM                   +RG  P++++Y
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEM------------------SARGLSPNLVTY 607

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+      G   E   L  EM++ G+ PNV   S L+S   ++GK ++A  VL+    
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN 667

Query: 293 KGLTP---------DAYS-----------------YDPLISAYCKDGRLDLAIEFLDYMI 326
             + P         D  S                 ++ +I   CK GR+  A    + + 
Sbjct: 668 IDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLR 727

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           +   LPD   Y++++     +G+ D+A  + + +   G  PN+ +YN++   L  SG   
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           RA+ + +++ SKGI P+ ITYN+LI   C++G   EA  L   M     +PTVI+Y+I+I
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            G C    + E+I++L  M E    PN  TY  LI G
Sbjct: 848 YGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 217/485 (44%), Gaps = 74/485 (15%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           +P +V   +L+    + R+ + A  ++  L  + EP +F + A +               
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEP-LFPHLAEVY-------------- 141

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ---- 184
                 R F+   V++++++ +    G + SA  VFD + +  C+P++ +   L+     
Sbjct: 142 ------RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 185 ------ATMLEGQTDKAMKLLDEM-------GMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
                 A M+ GQ   A  L DE          C+ G V QA +FV  +E  G + ++++
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ ++     MG  E+  +++  +  +GL PNVVTY++L+   C+DG+ E+A  V++  K
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 292 EKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           E G +  D  +Y  +I+ YC+ GR+D A    + M   G   ++  YNT++   CK G  
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++  ++ +++ DVG  P+  SYNT+       G   +A  M   M+  G+    +TYN+L
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTL 435

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           +   C    +D+A+ L   M      P                                 
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              VI++N +I G CK  R+ E+ E+L  M E  C P+  TY  L +G    G    A  
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555

Query: 496 LANAL 500
           L N +
Sbjct: 556 LMNKM 560



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 9/408 (2%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G+  E+   ++ M    C PD +    L   + +  +   A  +M  +E
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P V  +N+ I+G   A Q    N +   + +RG SP++VTY  +I   C  G + 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL------DEMGMCKKGMV-- 210
            A  ++ +++ +   P V   + L+     EG+ D+A  +L      D +  C    +  
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +    V ++         + +N+++  L   G+  + + L   + ++   P+  TYS L
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I      G  ++A  +       GLTP+  +Y+ LI   CK G+L  A+   + + S G 
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ + YNT++  +CK G   +A ++ +K+ + G  P V +Y+ +   L + G    A+ 
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           ++ +M+   ++P+ ITY +LI    + G ++E   L  +M      PT
Sbjct: 862 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 233/509 (45%), Gaps = 42/509 (8%)

Query: 42  KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEK 100
             + + F++ +F ++ +F+ S +    K + +  +     F      + AV +   +L +
Sbjct: 21  HFVPKKFQSFQFLKNTHFLISFLILLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQ 80

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI--- 157
              P  F +N ++    K+        +  ++  RG  P++   NI+I   C  G+I   
Sbjct: 81  NPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQ 140

Query: 158 -ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
              AF   D+L+        ++Y  LI      G+T  A+ LL  +              
Sbjct: 141 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNT 200

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              GMCK   V  AF     + S+G  P+V++Y+ L+     +GK ++   L  ++I   
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++P+  T++IL+   C+D K ++   V     ++G+ PD  +Y+ L+  YC    ++ A 
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
              + M   G  PDI +YN ++  FCK    D+A+ +F ++      PNV +YN++   L
Sbjct: 321 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 380

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP-- 437
             SG    AL ++ +M  +G+ P+ +TYNS+I  L +   VD+A+ L+   +    +P  
Sbjct: 381 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 440

Query: 438 ------------------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
                             TV +YN++I GFCK    +E++ +L+ M +  C PN  TY +
Sbjct: 441 YTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 500

Query: 480 LIEGIGYGGWRAEAMELANALVSMHAISR 508
            I  +       +A +L   +++   ++R
Sbjct: 501 TIRSLLDNNENDKAEKLFREMITRGLLNR 529



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 212/464 (45%), Gaps = 43/464 (9%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ----ERKSNKAVRV 94
           +F K++    ++  +   L   + M   G KP++  C  LI  F Q      + ++A   
Sbjct: 88  EFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLF 147

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            + L   G   D  +Y  LI G CK  +   A  +L R+  +    + V YN +I  +C 
Sbjct: 148 HDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCK 207

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
              +  AF ++ +++     P V+TY+ LI    + G+   A+ L +++ +         
Sbjct: 208 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL--------- 258

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                       +PD  ++N+L+       K +EG+ +   M+ +G+ P+VVTY+ L+  
Sbjct: 259 ---------ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG 309

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C   +   A  +     + G+ PD  SY+ LI+ +CK  ++D A+   + M     +P+
Sbjct: 310 YCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 369

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V YN+++    K+G    AL++ +++ D G PPN+ +YN++  AL+ +    +A+ +I+
Sbjct: 370 VVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALIT 429

Query: 394 EMLSKGIEPDEITY--------------------NSLISCLCRDGMVDEAVGLLVDMEST 433
           +   +GI+P   TY                    N +I   C+ G+ DEA+ LL  M+ +
Sbjct: 430 KFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDS 489

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
              P  ++Y I I         +++ ++   M  +G      +Y
Sbjct: 490 SCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 211/436 (48%), Gaps = 46/436 (10%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
            I + V +G  PD V C +L+ K                  K+  P +     L+    +
Sbjct: 182 LISAYVDSGFTPDAVQCFRLVTK-----------------NKFPVP-IRGCENLLRRVVR 223

Query: 119 ANQIELAN------KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
              +E+        +VLD     G+ P +  +N+++   C  G + +A  VFD++ +   
Sbjct: 224 LRPVEIERSWALYLEVLDS----GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGL 279

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +PTV+++  LI                   G CK G V + F+    +ES G  PDV ++
Sbjct: 280 RPTVVSFNTLIS------------------GCCKSGDVEEGFRLKGVMESEGVCPDVFTF 321

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + L+  L   G+ +EG  L  EM  RGL PN VT++ LI   C+ GK + A+   +    
Sbjct: 322 SALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLA 381

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+ PD  +Y+ LI+  CK G L  A   ++ M + G  PD + + T++   CK+G+ + 
Sbjct: 382 QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMES 441

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           ALEI  ++ + G   +  ++  + S L   G    A  M+++MLS G +PD+ TY  +I 
Sbjct: 442 ALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVID 501

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
           C C+ G V     LL +M+S    P V++YN ++ G CK  ++  +  +L AM   G  P
Sbjct: 502 CFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAP 561

Query: 473 NETTYVLLIEGIGYGG 488
           N+ TY +L++G    G
Sbjct: 562 NDITYNILLDGHSKHG 577



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 16/382 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKV----FDQLLRD--NCKPTVITYTILIQATMLE 189
           GF+PD V         C R + ++ F V     + LLR     +P  I  +  +   +L+
Sbjct: 190 GFTPDAVQ--------CFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLD 241

Query: 190 GQTDKAMKLLDEM--GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                 +   + +  G CK G VG A      +  RG +P V+S+N L+      G  EE
Sbjct: 242 SGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEE 301

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           G +L   M S G+ P+V T+S LI+ LC++G+ ++   +      +GL P+  ++  LI 
Sbjct: 302 GFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLID 361

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK G++DLA++    M++ G  PD+V YN ++   CK G+  +A  +  +++  G  P
Sbjct: 362 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKP 421

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  ++ T+       GD   AL +   M+ +GIE D++ + +LIS LCR+G V +A  +L
Sbjct: 422 DKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            DM S  F+P   +Y ++I  FCK   +    ++L  M   G  P   TY  L+ G+   
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541

Query: 488 GWRAEAMELANALVSMHAISRD 509
           G    A  L +A++++     D
Sbjct: 542 GQMKNAKMLLDAMLNVGVAPND 563



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 22/276 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK D +L   + M+A G +PD+V    LI    +     +A R++  + 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +PD   +  LI G CK   +E A ++  R+   G   D V +  +I  LC  G + 
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   +L    KP   TYT++I                     CKKG V   F+ ++
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDC------------------FCKKGDVKMGFKLLK 517

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++S G  P V++YN L+  L   G+ +  + L+  M++ G+ PN +TY+IL+    + G
Sbjct: 518 EMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
            + D VD+  +  EKGL  D  SY  L++   K  +
Sbjct: 578 SSVD-VDIFNS--EKGLVTDYASYTALVNESSKTSK 610


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 206/424 (48%), Gaps = 27/424 (6%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+     P ++   K++  F  + K    V +   LE  G +PD+F  N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSF-AKMKHYSTVSLSHRLELKGIQPDLFTLNIL 99

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+ FC   QI     VL ++  RG+ P  VT N +I  LC +G ++ A    D+LL    
Sbjct: 100 INCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 159

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +   + Y  LI                   G+CK G    A + ++ ++ R  +PDV+ Y
Sbjct: 160 QLNQVGYGTLIN------------------GVCKIGDTRAAIKLLKKIDGRLTKPDVVMY 201

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + ++  L       E   L +EM  +G+  +VVTY+ LI   C  GK ++A+ +L     
Sbjct: 202 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVL 261

Query: 293 KGLTPDAYSYDPLISAYCKDG-------RLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           K + PD Y+Y  L+ A CK+G       R+    + +D M   G   D++ Y++++   C
Sbjct: 262 KTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLC 321

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           KNG+ D+A+ +F K+ D G  PN+ ++  +   LW  G    A  +  ++L+KG   +  
Sbjct: 322 KNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVY 381

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN +I+  C+ G+++EA+ +L  ME     P   ++  II+   K    +++ ++L  M
Sbjct: 382 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441

Query: 466 FEKG 469
             +G
Sbjct: 442 IARG 445



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 177/397 (44%), Gaps = 47/397 (11%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N ++  F K       + +  RL  +G  PD+ T NI+I   C  G I   F V
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTVS-LSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++L+    P+ +T   LI+                  G+C KG V +A  F   L ++
Sbjct: 116 LAKILKRGYPPSTVTLNTLIK------------------GLCLKGQVKKALHFHDKLLAQ 157

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G Q + + Y  L+  +  +G      KL+ ++  R  +P+VV YS +I +LC+     +A
Sbjct: 158 GFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEA 217

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +      KG++ D  +Y+ LI  +C  G+L  AI  L+ M+     PD+  Y  ++ A
Sbjct: 218 YGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDA 277

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            CK G   +A                       S +W          +I EM  +G   D
Sbjct: 278 LCKEGKVKEA-------------------KRRISYVWD---------LIDEMRDRGQPAD 309

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY+SLI  LC++G +D A+ L   M+    RP + ++ I++ G  K  R+ ++ EV  
Sbjct: 310 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQ 369

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +  KG   N  TY ++I G    G   EA+ + + +
Sbjct: 370 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 406



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 155/292 (53%), Gaps = 11/292 (3%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           LE +G QPD+ + N+L+    +MG+   G  ++ +++ RG  P+ VT + LI  LC  G+
Sbjct: 84  LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 143

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNY 337
            + A+        +G   +   Y  LI+  CK G    AI+ L  +  DG L  PD+V Y
Sbjct: 144 VKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKI--DGRLTKPDVVMY 201

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           +TI+ A CK     +A  +F +++  G   +V +YNT+       G    A+G+++ M+ 
Sbjct: 202 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVL 261

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEA------VGLLVDMESTRFRPT-VISYNIIILGFC 450
           K I PD  TY  L+  LC++G V EA      V  L+D    R +P  VI+Y+ +I G C
Sbjct: 262 KTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLC 321

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           K   ++ +I +   M ++G +PN  T+ +L++G+  GG   +A E+   L++
Sbjct: 322 KNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLT 373



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 161/314 (51%), Gaps = 25/314 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     G+  ++L+F + ++A G + + V    LI    +   +  A+++++ ++ + 
Sbjct: 134 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRL 193

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  Y+ +I   CK   +  A  +   +  +G S DVVTYN +I   C  G ++ A 
Sbjct: 194 TKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAI 253

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK-------LLDEM------------ 202
            + + ++     P V TYTIL+ A   EG+  +A +       L+DEM            
Sbjct: 254 GLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITY 313

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK G + +A      ++ +G +P++ ++ +LL  L   G+ ++ +++  ++++
Sbjct: 314 SSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLT 373

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +G   NV TY+++I+  C+ G  E+A+ +L   ++ G  P+A++++ +I A  K    D 
Sbjct: 374 KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDK 433

Query: 318 AIEFLDYMISDGCL 331
           A + L  MI+ G L
Sbjct: 434 AEKLLRQMIARGLL 447



 Score = 45.1 bits (105), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 7/142 (4%)

Query: 367 PNVSSY--NTMFSALWSSGDKIR----ALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           PN SS+  N+  S   S    I+    A+   + ML     P  I +N ++    +    
Sbjct: 16  PNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
              V L   +E    +P + + NI+I  FC   +I     VLA + ++G  P+  T   L
Sbjct: 76  -STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 134

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I+G+   G   +A+   + L++
Sbjct: 135 IKGLCLKGQVKKALHFHDKLLA 156


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 224/487 (45%), Gaps = 19/487 (3%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   H L   V     + ++K     GK +E    I+    NGC P+VV    +I  + +
Sbjct: 193 RGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCK 252

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
           +    +A RV E L+  G  P +  Y ALI GFCKA + ++ +++L+ +   G + +V  
Sbjct: 253 KGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKV 312

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           +N +I +    G+++ A ++   +    C+P + TY ILI  +                 
Sbjct: 313 FNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS----------------- 355

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C  G + +A +F+   + R   P+  SY  L+      G +     ++ ++   G +P+
Sbjct: 356 -CSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPD 414

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           +V+Y   I      G+ + A+ V     EKG+ PDA  Y+ L+S  CK GR   A   L 
Sbjct: 415 LVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLS 474

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+     PD   Y T++  F +N   D+A E+FE +   G  P V  YN M   L   G
Sbjct: 475 EMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCG 534

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A+  +++M      PDE T++++I    +   +D A+ +   M   +++P V++Y 
Sbjct: 535 KMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYT 594

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +I GFCK   ++ + +V  AM     +PN  TY +LI G    G   +A      ++  
Sbjct: 595 SLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMN 654

Query: 504 HAISRDT 510
           + +  DT
Sbjct: 655 NCLPNDT 661



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 202/423 (47%), Gaps = 25/423 (5%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEP------DVFAYNALISGFCKAN 120
           C P VV    L+    +  K + A  + + +LE+ G+       D ++   ++ G C   
Sbjct: 160 CFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVG 219

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           ++E   K++D     G  P+VV YN++I   C +G ++ A +VF++L      PT+ TY 
Sbjct: 220 KVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYG 279

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
            LI                   G CK G      Q +  +   G   +V  +N ++    
Sbjct: 280 ALID------------------GFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKY 321

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G  ++  ++M  M   G EP++ TY+ILI+  C  G+ ++A + L  AKE+ L P+ +
Sbjct: 322 KYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKF 381

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           SY PL+ AYCK G   +A + L  +   G  PD+V+Y   +      G  D AL + EK+
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM 441

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + G  P+   YN + S L   G    A  ++SEML   ++PD   Y +L+    R+  +
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           D+A  L   + S    P V+ YN++I G CK  ++ +++  +  M      P+E T+  +
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561

Query: 481 IEG 483
           I+G
Sbjct: 562 IDG 564



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 203/474 (42%), Gaps = 41/474 (8%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           T +  LI  S   G+  E+  F+E        P+    T L+  + ++     A  ++ +
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           I E   +PD+ +Y A I G     +I++A  V +++  +G  PD   YN+++  LC +G 
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
             +A  +  ++L  N +P    Y  L+   +   + DKA +L + +              
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK G +  A  +V  ++     PD  +++ ++   +     +   K+  +M+ + 
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            +PNVV Y+ LI+  C+      A  V RA +   L P+  +Y  LI  + K G+ + A 
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAA 645

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            F + M+ + CLP+   ++ ++       N    +E  E+                    
Sbjct: 646 SFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEE-------------------- 685

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
               D+   L   + M+S+G      TYNS+I CLC+ GMVD A  L   M    F    
Sbjct: 686 ---NDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDS 742

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           + ++ ++ G C+T +  E   +++    K        Y L ++   Y G  +EA
Sbjct: 743 VCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEA 796



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 7/292 (2%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           +IK   + GK  +++ ++  M      PD    + +I  + ++   + A+++  +++++ 
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V AY +LI+GFCK   +  A KV   ++S    P+VVTY I+IG     G  E A 
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAA 645

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
             F+ +L +NC P   T+  LI    L   T+  + L+++     + ++     F  ++ 
Sbjct: 646 SFFELMLMNNCLPNDTTFHYLING--LTNITNTTL-LIEKNEENDRSLI---LDFFATMI 699

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S G    + +YN ++  L   G  +  + L T+M+ +G   + V +S L+  LC+ GK++
Sbjct: 700 SEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSK 759

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           +  +++     K     A+ Y   +  Y  DG+   A   L  +I D  L D
Sbjct: 760 EWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNLIEDSKLSD 811


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 215/436 (49%), Gaps = 20/436 (4%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANK 127
           KP ++  + LI  F Q  +   A  ++  + K G + DV     L+ G C   ++  A  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           +L     RGF  D V Y  +I  LC  G    A ++F ++ +    P +I Y  +I    
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVID--- 218

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G+CK+G+V +A      +   G + DV SYN ++    ++G+++ 
Sbjct: 219 ---------------GLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQA 263

Query: 248 GEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
             KL+ EM+ RG + P+V T++ILI  LC+ G+  +A +V+    ++G  PD  SY+ L+
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           + YC  G +  A +  D M+    LP++++Y T++  +CK    D+A+ +  ++ +    
Sbjct: 324 NGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+  +YN +   L  SG  +    ++  M + G   D ITYN L+    +    D+A+ L
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              +      P + +YNI++ G CK+ R+  + E+   +  KGC+PN  TY ++I G+  
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503

Query: 487 GGWRAEAMELANALVS 502
            G+  EA  L   +V+
Sbjct: 504 EGFLDEAEALLYKMVN 519



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 229/457 (50%), Gaps = 28/457 (6%)

Query: 11  KSNERVRVSSSAETRPNTH--LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
           + N  V + +  +++P     L++F +    F +L       G+   +   + +++  G 
Sbjct: 84  RYNAVVSLYTILQSKPTIKPSLITFSILINAFAQL-------GQMGFAFSLLGNILKMGF 136

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANK 127
           + DV + T L+K    + +  +AV ++ E +++    D   Y  +I+G CK  +   A +
Sbjct: 137 QIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQ 196

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           +  +++     P+++ YN +I  LC +G+++ A  +  +++ +  +  V +Y  +I    
Sbjct: 197 MFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFC 256

Query: 188 LEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
             G+   A+KLLDEM                  G+CK G V +A+  V  +  RG +PD+
Sbjct: 257 SVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDI 316

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +SYN L+      G   E +++  +M+ R   PNV++Y  LI+  C+    ++A+ +L  
Sbjct: 317 VSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTE 376

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K L PD  +Y+ L+    K GR     + ++ M + G   D++ YN +L  + K+  
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+AL +F+ + ++G  PN+ +YN +   L  SG    A  +   + +KG +P+  TYN 
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNI 496

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +I  LC++G +DEA  LL  M +  + P  I+++ I+
Sbjct: 497 MIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 142/277 (51%), Gaps = 2/277 (0%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +N LL TL+ + ++     L T + S+  ++P+++T+SILI++  + G+   A  +L   
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            + G   D      L+   C  GR+  A+  L   +  G   D V Y TI+   CK G  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
             A+++F K+  +   PN+  YNT+   L   G    A G+ +EM+  GIE D  +YNS+
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 411 ISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           I   C  G    AV LL +M    +  P V ++NI+I G CK  R++E+  V+A M ++G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
            KP+  +Y  L+ G    G   EA ++ + +V   A+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL 348



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 82/142 (57%), Gaps = 4/142 (2%)

Query: 52  KFDESLY---FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           K   SLY    +E+M A+G   D++    L+  +F+  K +KA+ + + I+E    P++ 
Sbjct: 398 KSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIR 457

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L+ G CK+ +++ A ++   L ++G  P++ TYNIMI  LC  G ++ A  +  ++
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517

Query: 168 LRDNCKPTVITYTILIQATMLE 189
           + +N  P  IT+  +++A +++
Sbjct: 518 VNNNYLPNYITFDTIVRAILVK 539



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 98/211 (46%), Gaps = 1/211 (0%)

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIFEKL 360
           ++ L+S   K  R +  +     + S   + P ++ ++ ++ AF + G    A  +   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
             +G   +V    T+   L   G  + A+ ++ E + +G   DE+ Y ++I+ LC+ G  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            +A+ +   M+  R  P +I YN +I G CK   ++E+  +   M E G + +  +Y  +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 481 IEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           I G    G    A++L + +V    +  D +
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 19/188 (10%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNAL 112
           DE++  +  M      PD V    L+    +  +S     ++E +   G+P D+  YN L
Sbjct: 368 DEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVL 427

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           +  + K  + + A  +   +   G SP++ TYNI++  LC  G ++ A ++F  L    C
Sbjct: 428 LDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGC 487

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           +P + TY I+I                   G+CK+G + +A   +  + +    P+ I++
Sbjct: 488 QPNIRTYNIMIH------------------GLCKEGFLDEAEALLYKMVNNNYLPNYITF 529

Query: 233 NMLLRTLL 240
           + ++R +L
Sbjct: 530 DTIVRAIL 537


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 222/461 (48%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK S +  +F+++  F++ M   G KPDV   + +I    +  K + A+ + + + + G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             PDV  YN LI GF K    + A ++ DR L      P+V T+NIMI  L   G ++  
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            K+++++ ++  +  + TY+ LI      G  DKA  + +E+                 G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            C+ G + ++ +  R +E +    +++SYN+L++ LL  GK +E   +   M ++G   +
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
             TY I I  LC +G    A+ V++  +  G   D Y+Y  +I   CK  RL+ A   + 
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M   G   +    N ++    ++    +A     ++   GC P V SYN +   L  +G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
               A   + EML  G +PD  TY+ L+  LCRD  +D A+ L      +     V+ +N
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I+I G C   ++++++ V+A M  + C  N  TY  L+EG 
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 217/490 (44%), Gaps = 55/490 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-------------- 94
           +AGK D++L   + M   G  PDV     LI  F +E+    A+ +              
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNV 255

Query: 95  -------------------MEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDR 131
                              ++I E+      E D++ Y++LI G C A  ++ A  V + 
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           L  R  S DVVTYN M+G  C  G I+ + +++ +++       +++Y ILI+  +  G+
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGK 374

Query: 192 TDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
            D+A  +   M                 G+C  G V +A   ++ +ES G   DV +Y  
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++  L    + EE   L+ EM   G+E N    + LI  L RD +  +A   LR   + G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             P   SY+ LI   CK G+   A  F+  M+ +G  PD+  Y+ +L   C++   D AL
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E++ +    G   +V  +N +   L S G    A+ +++ M  +    + +TYN+L+   
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            + G  + A  +   M     +P +ISYN I+ G C  R ++ ++E        G  P  
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674

Query: 475 TTYVLLIEGI 484
            T+ +L+  +
Sbjct: 675 YTWNILVRAV 684



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 211/433 (48%), Gaps = 32/433 (7%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYG-EPDVFAYNALISGFC 117
           +E + +  CK D  +   +IK + +    ++A+ V + + E +G EP + +YN L++ F 
Sbjct: 66  VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +A Q      +     + G +P++ TYN++I   C +   E A    D + ++  KP V 
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           +Y+ +I      G+ D A++L DEM                    RG  PDV  YN+L+ 
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEM------------------SERGVAPDVTCYNILID 227

Query: 238 TLLNMGKWEEGEKLMTEMISRGLE-----PNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L     E+  K   E+  R LE     PNV T++I+IS L + G+ +D + +    K+
Sbjct: 228 GFLK----EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
                D Y+Y  LI   C  G +D A    + +       D+V YNT+L  FC+ G   +
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLI 411
           +LE++ ++ +     N+ SYN +   L  +G KI    MI  ++ +KG   D+ TY   I
Sbjct: 344 SLELW-RIMEHKNSVNIVSYNILIKGLLENG-KIDEATMIWRLMPAKGYAADKTTYGIFI 401

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC +G V++A+G++ ++ES+     V +Y  II   CK +R+ E+  ++  M + G +
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461

Query: 472 PNETTYVLLIEGI 484
            N      LI G+
Sbjct: 462 LNSHVCNALIGGL 474



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 183/389 (47%), Gaps = 17/389 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     AG  D++      +       DVV    ++  F +  K  +++ +  I+E
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                ++ +YN LI G  +  +I+ A  +   + ++G++ D  TY I I  LC  G +  
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNK 412

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A  V  ++        V  Y  +I     + + ++A  L+ EM                 
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+ +   +G+A  F+R +   GC+P V+SYN+L+  L   GK+ E    + EM+  G +P
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TYSIL+  LCRD K + A+++     + GL  D   ++ LI   C  G+LD A+  +
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M    C  ++V YNT++  F K G++++A  I+  +  +G  P++ SYNT+   L   
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLI 411
                A+    +  + GI P   T+N L+
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILV 681



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 168/354 (47%), Gaps = 21/354 (5%)

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           R  G++   V Y+ ++  L    M+    ++ + +    CK                   
Sbjct: 35  RHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKC----------------DE 78

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           D A+ ++   G  K  M  QA   F R  E  GC+P + SYN LL   +   +W + E L
Sbjct: 79  DVALSVIKTYG--KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESL 136

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
                + G+ PN+ TY++LI   C+  + E A   L    ++G  PD +SY  +I+   K
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVS 370
            G+LD A+E  D M   G  PD+  YN ++  F K  +   A+E++++ L D    PNV 
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N M S L   G     L +   M     E D  TY+SLI  LC  G VD+A  +  ++
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  +    V++YN ++ GFC+  +I ES+E+   M  K    N  +Y +LI+G+
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGL 369



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 18/217 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKY 101
           LI    R  +  E+ +F+  M  NGC+P VV    LI    +  K  +A   V E+LE  
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD+  Y+ L+ G C+  +I+LA ++  +    G   DV+ +NI+I  LCS G ++ A 
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            V   +   NC   ++TY  L++     G +++A  +   M                 G+
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           C    V  A +F     + G  P V ++N+L+R ++N
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A +  G    A  Y  ++    +   ++     ++ + S  C  D     +++  + KN 
Sbjct: 33  ATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNS 92

Query: 349 NADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
             DQAL++F+++ ++ GC P + SYNT+ +A   +   ++   + +   + G+ P+  TY
Sbjct: 93  MPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N LI   C+    ++A G L  M    F+P V SY+ +I    K  ++++++E+   M E
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +G  P+ T Y +LI+G         AMEL + L+
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 10/270 (3%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +I +  ++   + A+DV +  +E  G  P   SY+ L++A+ +  +         Y  + 
Sbjct: 84  VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++  YN ++   CK    ++A    + +   G  P+V SY+T+ + L  +G    A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIIL 447
           L +  EM  +G+ PD   YN LI    ++     A+ L   + E +   P V ++NI+I 
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL----VSM 503
           G  K  R+++ +++   M +   + +  TY  LI G+   G   +A  + N L     S+
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323

Query: 504 HAISRDT----FKRLNRTFPLLDVYKEISH 529
             ++ +T    F R  +    L++++ + H
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEH 353



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           GK D+++  + +M    C  ++V    L++ FF+   SN+A  +   + K G +PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           N ++ G C    +  A +  D  R+ G  P V T+NI++ ++ +R
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 234/502 (46%), Gaps = 77/502 (15%)

Query: 40  FMKLIKRSFRAGKFD--ESLYFIESMVANGCKPDV--------VMC----TKLIKKFFQE 85
           + +LI  + R  + D  E+LY  + ++  G +PDV         +C     +L ++ F+ 
Sbjct: 113 YNRLILTALRESRLDLVEALY--KDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEA 170

Query: 86  R----------------KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
                            ++ ++V  +++L+     ++   N +++GFCK   +E A +++
Sbjct: 171 MPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLV 230

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN----CKPTVITYTILIQA 185
           +R+R +G +P+VVT+N  I +LC  G +  A+++F  +  D      +P  +T+ +++  
Sbjct: 231 ERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLS- 289

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                            G C  G V +A   V  +   G    V SYN  L  L+  G+ 
Sbjct: 290 -----------------GFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRV 332

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
            E  +L+ EM    + PN  TY+I++S LC++GK  DA  V    +   ++PD  +Y  L
Sbjct: 333 GEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSL 392

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           + AYC  G +  A   LD M   GC P+   YN +L +  + G   +A  + E++S+ G 
Sbjct: 393 LHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGY 452

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE-----------------------P 402
             + +  N +   L  +     A+G++  M  +G                         P
Sbjct: 453 SLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLP 512

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D ITY+ LIS LC++G  DEA   L++M      P  + Y+  I G+CK  + + +I+VL
Sbjct: 513 DRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572

Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
             M +KGC P+  TY LLI G 
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGF 594



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 192/417 (46%), Gaps = 45/417 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE---KYG--E 103
           + G  +E+   +E M   G  P+VV     I    +  +   A R+ + ++   ++G   
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPR 278

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD   ++ ++SGFC A  ++ A  ++D +R  GF   V +YN  +  L   G +  A ++
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHEL 338

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
             ++  +   P   TY I++     EG+   A ++ + +                   C 
Sbjct: 339 LREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           KG +  A + +  +  +GC P+  +YN+LL++L   G+  E E+L+  M  +G   +   
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAG 458

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLT-----------------------PDAYSYD 303
            +I+I  LCR+ K + A+ ++    E+G T                       PD  +Y 
Sbjct: 459 CNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYS 518

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LISA CK+GR D A + L  MI     PD V Y+T +  +CK+G    A+++   +   
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           GC P+  +YN +             + ++SEM  KG+ P+ +TYNSLI   C+ GM+
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 209/473 (44%), Gaps = 79/473 (16%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
           R +  A R +  L     P    YN LI    + ++++L   +   L   G  PDV T N
Sbjct: 90  RLAIPAFRSLRALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRN 149

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--- 202
           +++ +LC  G +E A +VF+ +   N      ++ IL +     G++  A+K+LD M   
Sbjct: 150 LLLRALCDAGRMELAQRVFEAMPVRN----EFSFGILARGYCRAGRSVDALKVLDGMPSM 205

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL- 251
                     G CK+G+V +A + V  +  +G  P+V+++N  +  L   G+  +  ++ 
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIF 265

Query: 252 --MTEMISRGL-EPNVVTYSILISSLC--------------------------------- 275
             M E    GL  P+ VT+ +++S  C                                 
Sbjct: 266 KDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 276 --RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             R+G+  +A ++LR    + + P++Y+Y+ ++S  CK+G+   A    +++ S    PD
Sbjct: 326 LVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y ++L A+C  GN   A  I ++++  GC PN  +YN +  +LW +G    A  ++ 
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME---------------------- 431
            M  KG   D    N +I  LCR+  +D A+G++  M                       
Sbjct: 446 RMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSS 505

Query: 432 -STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            S R  P  I+Y+I+I   CK  R +E+ + L  M  K   P+   Y   I G
Sbjct: 506 ISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHG 558



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 31/304 (10%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM----------ISRGL------------- 260
           G QPDV + N+LLR L + G+ E  +++   M          ++RG              
Sbjct: 140 GAQPDVFTRNLLLRALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVL 199

Query: 261 ----EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
                 N+V  + +++  C++G  E+A  ++   + +GL P+  +++  ISA CK GR+ 
Sbjct: 200 DGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVL 259

Query: 317 LAIEFLDYMISDG----CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            A      M  D       PD V ++ +L+ FC  G  D+A  + + +   G    V SY
Sbjct: 260 DAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESY 319

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N   S L  +G    A  ++ EM  + I P+  TYN ++S LC++G   +A  +   + S
Sbjct: 320 NRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRS 379

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P V++Y  ++  +C    I  +  +L  M +KGC PN  TY +L++ +   G   E
Sbjct: 380 GVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTE 439

Query: 493 AMEL 496
           A  L
Sbjct: 440 AERL 443



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+FDE+   +  M+     PD V+    I  + +  K++ A++V+  +EK G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
             P    YN LI GF + ++ +   K++  +  +G SP+V+TYN +I S C +GM+
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 225/452 (49%), Gaps = 23/452 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
           F+E+   +  M + G  P+ V+   LI  + ++    +A+RV + +   G +P+   +N 
Sbjct: 341 FEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNT 400

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           L+ GFC++NQ+E A +VL  + S G S ++   + +I  L  R    SA K+  +LL  N
Sbjct: 401 LLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGN 460

Query: 172 CK-------PTVI-------------TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            +       P V+              +  L     L   T  +  LL   G+C++G + 
Sbjct: 461 IRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH--GLCERGNME 518

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           + F+ ++ +  +G   D ISYN L+      GK EE  KL  EM+ +  +P+  TY+ L+
Sbjct: 519 EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLM 578

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             L   GK +D   +L  AKE G  P+ Y+Y  L+  YCK  R++ A++F   +  +   
Sbjct: 579 KGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVE 638

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
              V YN ++AA+C+ GN  +A ++ + +   G  P  ++Y+++   +   G    A  +
Sbjct: 639 LSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEI 698

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             EM ++G+ P+   Y +LI   C+ G +D    +L++M S   RP  I+Y I+I G+CK
Sbjct: 699 FEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK 758

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
              + E+ E+L  M   G  P+  TY  L +G
Sbjct: 759 LGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 207/467 (44%), Gaps = 55/467 (11%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + F   E  F  LI    R G   E+L   + M   G KP+ V    L++ F +  +  +
Sbjct: 354 MGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQ 413

Query: 91  AVRVMEILEKYG---EPDVFAY---------------------------------NALIS 114
           A +V+  +   G     DV +Y                                   L+ 
Sbjct: 414 AEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVV 473

Query: 115 GFCKANQIELANKVLDRLRS-RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           G CK      A ++  +L + +G + + VT N ++  LC RG +E  F+V  Q+L     
Sbjct: 474 GLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLL 533

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
              I+Y  LI                   G CK G + +AF+    +  +  QPD  +YN
Sbjct: 534 LDRISYNTLI------------------FGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYN 575

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L++ L +MGK ++  +L+ E    G  PNV TY++L+   C+  + EDAV   +    +
Sbjct: 576 FLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYE 635

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            +   +  Y+ LI+AYC+ G +  A +  D M S G LP    Y++++   C  G  D+A
Sbjct: 636 KVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEA 695

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
            EIFE++ + G  PNV  Y  +       G       ++ EM S GI P++ITY  +I  
Sbjct: 696 KEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDG 755

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            C+ G + EA  LL +M      P  ++YN +  G+CK R +  +++
Sbjct: 756 YCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 218/483 (45%), Gaps = 53/483 (10%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELAN 126
           G  P +  C  L+    +  + +K+  V ++  +   PDVF +   I+ FCK  ++  A 
Sbjct: 216 GVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAV 275

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            +  ++   G  P+VVTYN +I  L   G  E A +  D+++R    P+V+TY +LI   
Sbjct: 276 DLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGL 335

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
           M     ++A ++L EM                 G C+KG +G+A +    +  +G +P+ 
Sbjct: 336 MKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNF 395

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN--VVTYSI------------------ 269
           +++N LL+      + E+ E+++  ++S GL  N  V +Y I                  
Sbjct: 396 VTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTK 455

Query: 270 ---------------LISSLCR-DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
                          L+  LC+ +G +E      + A  KGL  +  + + L+   C+ G
Sbjct: 456 LLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERG 515

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            ++   E L  M+  G L D ++YNT++   CK G  ++A ++ E++      P+  +YN
Sbjct: 516 NMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYN 575

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +   L   G       ++ E    G  P+  TY  L+   C+   +++AV    +++  
Sbjct: 576 FLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYE 635

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +   + + YNI+I  +C+   + E+ ++  AM  +G  P   TY  LI G+   G   EA
Sbjct: 636 KVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEA 695

Query: 494 MEL 496
            E+
Sbjct: 696 KEI 698



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 214/512 (41%), Gaps = 34/512 (6%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNT--HLLSFDVKETQFMKLIK------RSFRAGKFD 54
           +++  + P   +R+ +S      P T      F  +   F   ++      RS  A  F 
Sbjct: 75  SILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLADSFV 134

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALIS 114
               F+ + + +G  P     +      F +R    A  ++E+ +   E  +   + L+ 
Sbjct: 135 PRARFLLARLIDGHVPT---WSSKTTTSFHDRLREIASSMLELNQGSDEQRLGELDLLLH 191

Query: 115 GFC---KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
             C   K      A  +      RG  P + T N+++ SL     +  +++VFD L    
Sbjct: 192 ILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQG 250

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             P V T+T  I A                   CK G VG A      +E  G  P+V++
Sbjct: 251 VAPDVFTFTTAINA------------------FCKGGRVGDAVDLFCKMEGLGVFPNVVT 292

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN ++  L   G++EE  +    M+   + P+VVTY +LIS L +    E+A +VL    
Sbjct: 293 YNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMY 352

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
             G  P+   ++ LI  YC+ G +  A+   D M   G  P+ V +NT+L  FC++   +
Sbjct: 353 SMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQME 412

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           QA ++   +   G   N+   + +   L      + AL +++++LS  I   +     L+
Sbjct: 413 QAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLV 472

Query: 412 SCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
             LC+     EA+ L   + + +      ++ N ++ G C+   + E  EVL  M EKG 
Sbjct: 473 VGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGL 532

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +  +Y  LI G    G   EA +L   +V 
Sbjct: 533 LLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ 564


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 208/426 (48%), Gaps = 24/426 (5%)

Query: 69  KPDVVMCTKLIKKFFQERKSNKAVRVMEI-LEKYGEPDVFAYNALISGFCKANQIELANK 127
           +P      +L+       + + A R  +  L +   PD+F +N +ISG CK  Q+  A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD----NCKPTVITYTILI 183
           V   +R+ G +P VVTYN +I   C RG     + V D LL++       P  +T+ +L+
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHV-DALLKEMVEAGISPNEVTFNVLV 265

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                              G CK      A +    ++ +G    V++Y+ L+  L + G
Sbjct: 266 N------------------GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEG 307

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K EEG KL+ EM   GL PN+ T + +++  C+ G   DA   + + ++K + P+  +Y 
Sbjct: 308 KVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYT 367

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            L+  Y +  ++  A+   + M   G  P+   YN ++A F +NG+      + +++   
Sbjct: 368 ILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMK 427

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G   ++ +YN +  AL   G+  +A+ ++ EML  G+EP  +TYN++I+  C  G +  A
Sbjct: 428 GVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSA 487

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +   ME  + R  V++YN+ I   C+  ++ E+ E+L  M EKG  PN  TY  + EG
Sbjct: 488 YEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547

Query: 484 IGYGGW 489
           +   G+
Sbjct: 548 MMEKGY 553



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 27/417 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P  F+ N L+S    A +++LA +       R  SPD+ T+NI+I  LC  G +  A  V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ---FVRSL 220
              +      P+V+TY  +I                   G CK+G  G+ +     ++ +
Sbjct: 208 AKDIRAWGLAPSVVTYNTIID------------------GYCKRGRAGRMYHVDALLKEM 249

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G  P+ +++N+L+             ++  EM  +G+  +VVTYS L+  LC +GK 
Sbjct: 250 VEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKV 309

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+ V ++   K+ GL P+  + + +++ +CK G +  A  ++D M      P++V Y  +
Sbjct: 310 EEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTIL 369

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  + +      AL + E +S  G  PN   YN + +    +GD     G++ EM  KG+
Sbjct: 370 VDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGV 429

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
             D +TYN LI  LC  G V +AV LL +M      P  ++YN II G+C+   I  + E
Sbjct: 430 RADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYE 489

Query: 461 VLAAMFEKGCK-PNETTYVLLIEGIGYGGWRAEAMELANALVSM----HAISRDTFK 512
           +   M EKG K  N  TY + I+ +   G   E  EL N ++      + ++ DT K
Sbjct: 490 IRTRM-EKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIK 545



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 19/235 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   ++  +I+SM     KP+VV  T L+  + +  K   A+ V E +   G  P+  
Sbjct: 340 KKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNAR 399

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF +       + +LD +R +G   D+VTYN++IG+LC +G +  A K+ D++
Sbjct: 400 IYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM 459

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L    +P  +TY  +I                   G C+KG +  A++    +E    + 
Sbjct: 460 LMVGLEPVHLTYNTIIN------------------GYCEKGNIKSAYEIRTRMEKGKKRA 501

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +V++YN+ ++ L  MGK EE  +L+ EM+ +GL PN VTY  +   +   G T D
Sbjct: 502 NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 213/473 (45%), Gaps = 53/473 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G  DE+      M+  G          +IK   ++++   A+ ++E++   G
Sbjct: 332 LIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG 391

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            PDVF Y  LI   CK  ++  A  + D+++  G  P +VTY+ ++   C +G ++ A K
Sbjct: 392 VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALK 451

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           ++ ++      P  +TYT L++  + +   D A  LL+EM                    
Sbjct: 452 LYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM------------------RQ 493

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G      +YN+L+  L  + +  E ++++   +S G  P  +TY+ +I+   + G    
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  + R  ++KG+TP+  +Y   I  YC+    DLA++ L Y+  DG  PDI  YN  + 
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYN----------------------------- 373
            FCK GN  +AL     L   G  P+V+ YN                             
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 374 ------TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
                 T+       G+   AL + SEM++  + PD+ T+ +L   LCR G +D A  LL
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            DM      P +++YN++I    +  ++ E+ ++   M   G  P++TTY +L
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 211/443 (47%), Gaps = 21/443 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+  + R     ++L   + M   GC  D  M   +I+   +      AVR+ + +   G
Sbjct: 156 LLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD   Y   ISG CK    + A +VL ++R  GF P  +TY+ ++  L   G ++ A 
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEAL 275

Query: 162 KVFDQ-LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           ++ DQ LL    K  V+  T+L+    L G+  KA+ L DE                  +
Sbjct: 276 RLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDE------------------V 317

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S G  P  ++Y +L++     G  +E  KL  +MI +GL  +   ++++I  L RD + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           +DA+ +L    + G+ PD ++Y  LI   CK  +L  A+   D M   G  P IV Y+++
Sbjct: 378 KDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L  +C+ G  D+AL+++ ++ D G PPN  +Y T+            A  +++EM   G+
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
              + TYN LI+ L     V E   +L    S  F PT ++YN II GF K   +  +  
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 461 VLAAMFEKGCKPNETTYVLLIEG 483
           +   M +KG  PN  TY   I+G
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDG 579



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 1/210 (0%)

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G+ PDA S   L+    +      A+   D M   GC  D   Y+ ++ A  + G    
Sbjct: 144 RGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCD 203

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A+ +F++++  G  P+   Y    S L    D  RAL ++ +M   G EP E+TY+S++ 
Sbjct: 204 AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVD 263

Query: 413 CLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
            L + G +DEA+ L   M  +T  +  V+   +++ G+C    + +++++   +   G  
Sbjct: 264 VLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVT 323

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
           P   TY +LI+G    G   E  +L   ++
Sbjct: 324 PTNVTYGVLIKGCDAEGMSDETYKLCRQMI 353



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 70/314 (22%)

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
           + M++RG+ P+  + + L+ +  R     DA+ +    + KG   DA  YD +I A  + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G    A+   D M   G  PD   Y   ++  CK  +AD+AL++  K+ + G  P   +Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 373 NTMFSA-----------------LWSSGDKI-------------------RALGMISEML 396
           +++                    L ++G K+                   +AL +  E++
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAV---------GLLVD-----------MESTRFR 436
           S G+ P  +TY  LI     +GM DE           GLL+            +   R++
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 437 --------------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                         P V +Y  +I   CK ++++E++ +   M E G KP+  TY  L+ 
Sbjct: 379 DAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438

Query: 483 GIGYGGWRAEAMEL 496
           G    G   EA++L
Sbjct: 439 GYCEKGRMDEALKL 452



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 19/191 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G    +L+F+  ++ +G  PDV +    +  +   +   +A +    ++++    D  
Sbjct: 617 KQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI GF K   +  A ++   + +    PD  T+  +   LC  G I+ A ++ D +
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R +  P ++TY +LI A + +G+  +A +L DEM                   S G  P
Sbjct: 737 RRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM------------------LSSGVVP 778

Query: 228 DVISYNMLLRT 238
           D  +Y++L RT
Sbjct: 779 DDTTYDILPRT 789



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 1/179 (0%)

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M++ G +PD  +   +L    +  +A  AL +F+++   GC  +   Y+ +  A    G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+ +  EM   G++PDE  Y   IS LC+    D A+ +L  M    F P  ++Y+ 
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 445 IILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++    K  R++E++ +   M    G K +     +L+ G    G   +A++L + +VS
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVS 319



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%)

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           + ++   G  P+  S   +            AL +  EM  KG   D   Y+ +I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            GM  +AV L  +M     +P    Y I I G CK R  + +++VL  M E G +P E T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 477 YVLLIEGIGYGGWRAEAMELANALV 501
           Y  +++ +   G   EA+ L + ++
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQML 282


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 237/508 (46%), Gaps = 53/508 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  DE+  F   + + G  P  V    L++ F +    ++A+ +M+ +E     PD  
Sbjct: 292 REGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAV 351

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L++ + +A   E    ++D +   G  P+ VTY  MI +      ++ A  ++DQ+
Sbjct: 352 TYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM 411

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMV 210
               C P V TY  ++     + Q+++ MK+L +M                 MC  KGM 
Sbjct: 412 KESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMH 471

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               +  + ++S G +PD  ++N L+      G   + EK+  EM+  G  P+V TY+ L
Sbjct: 472 KYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNAL 531

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG------RLDLAIE---- 320
           +++L R G    A  V++  K KG  P   SY  ++++Y K G      R++  I     
Sbjct: 532 LNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHI 591

Query: 321 FLDYMI-------------------------SDGCLPDIVNYNTILAAFCKNGNADQALE 355
           F  +M+                           G  PD+V +N++L+ F +    D+A E
Sbjct: 592 FPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHE 651

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I   + + G  P++ +YN++       G+  +A  ++ E+ + G + D I+YN++I   C
Sbjct: 652 IMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFC 711

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G++ EA+  L +M S   RP +++YN  + G+       E  EVL+ M +  C+PNE 
Sbjct: 712 RQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNEL 771

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSM 503
           TY ++++G        EAM+  + +  +
Sbjct: 772 TYKIVVDGYCKAKKFKEAMDFVSTITDI 799



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 193/390 (49%), Gaps = 18/390 (4%)

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           + +Q  +A+K+ D +    +S DV  Y  ++ S    G  E A  +F+++      PT++
Sbjct: 186 RESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLV 245

Query: 178 TYTILIQATMLEGQT-DKAMKLLDEM----------------GMC-KKGMVGQAFQFVRS 219
           TY +++      G++ +K + LLDEM                  C ++G++ +A +F   
Sbjct: 246 TYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVG 305

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L+S+G  P  ++YN LL+     G + E   +M EM      P+ VTY+ L+++  R G 
Sbjct: 306 LKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGF 365

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            E+   ++    E G+ P+A +Y  +I+AY +  ++D A+   D M   GC P++  YN 
Sbjct: 366 YEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNA 425

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           IL    K   +++ ++I   +   GC PN  ++NTM S   + G       +  EM S G
Sbjct: 426 ILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCG 485

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            EPD  T+N+LI+   R G   +A  +  +M    F P+V +YN ++    +      + 
Sbjct: 486 FEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAE 545

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
            V+  M  KG KP+ET+Y L++     GG+
Sbjct: 546 SVIKDMKNKGFKPSETSYSLILNSYAKGGY 575



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 4/303 (1%)

Query: 196 MKLLDEMGMCKKGMVGQAFQF-VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           +K LD  G C++ ++   F++ V +L +     D  +  ++ R L    +     KL   
Sbjct: 142 LKALDLSGDCERAIL--LFEWLVLNLGTGNVNLDNQAVELMARILGRESQHSIASKLFDV 199

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           +       +V  Y+ ++ S  R GK E AV +     E GL+P   +Y+ ++  Y K GR
Sbjct: 200 IPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGR 259

Query: 315 -LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
             +  +  LD M S G   D    +T+++A  + G  D+A E F  L   G  P   +YN
Sbjct: 260 SWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYN 319

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +      +G    AL ++ EM      PD +TYN L++   R G  +E   L+  M   
Sbjct: 320 ALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTEN 379

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             +P  ++Y  +I  + +  ++++++ +   M E GC PN  TY  ++  +G      E 
Sbjct: 380 GIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEM 439

Query: 494 MEL 496
           M++
Sbjct: 440 MKI 442



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 5/194 (2%)

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           ++ +  +A +  D +  D    D+  Y TIL ++ + G  ++A+ IFEK+++ G  P + 
Sbjct: 186 RESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLV 245

Query: 371 SYNTM---FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +YN M   +  +  S +KI  LG++ EM SKG+  DE T +++IS   R+G++DEA    
Sbjct: 246 TYNVMLDVYGKMGRSWNKI--LGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFF 303

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           V ++S  + P  ++YN ++  F K    +E++ ++  M +  C P+  TY  L+      
Sbjct: 304 VGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRA 363

Query: 488 GWRAEAMELANALV 501
           G+  E   L + + 
Sbjct: 364 GFYEEGAALIDTMT 377


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 215/421 (51%), Gaps = 24/421 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER--KSNKAV-RVME 96
           F  +IK   +  K  E++  I  M    C PD      ++   +  R  K+++++ ++ E
Sbjct: 196 FTNVIKFGVK-NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNE 254

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +LE    P    YN +I G+C+  Q+E A +  +++  + F PD+ T NI++  LC+ GM
Sbjct: 255 LLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 314

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +++A K+F+  +        +TY  +I                   G+CK+G   +AF  
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIIS------------------GLCKEGRFEEAFDL 356

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNM-GKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           +  +E +   PD  +YN +L  L +  G+ E+  +   +M+ +  +P++ T +IL+  LC
Sbjct: 357 LAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLC 416

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCLPDI 334
            +G  ++A+ +      KG   DA +Y+ +IS  CK+GR + A + L  M   +G +PD 
Sbjct: 417 TEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQ 476

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YNTI+  +C+ G  ++A +   K+ +    P++ + N +   L   G  ++AL + + 
Sbjct: 477 TTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNT 536

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
            +SKG   D +TYN++IS LC++G  +EA  LL +M+  +  P   +YN I+       R
Sbjct: 537 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGR 596

Query: 455 I 455
           +
Sbjct: 597 M 597



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 197/401 (49%), Gaps = 25/401 (6%)

Query: 103 EPDVFAYNALISGFCK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL--CSRGMI 157
           +P V    A+ +   K    N++  A  ++ +++     PD  +YN ++  L  C  G  
Sbjct: 186 KPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKT 245

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           + +    ++LL     P  ITY  +I                   G C++G V +AFQF 
Sbjct: 246 DQSIDKLNELLESGLVPHQITYNTIIH------------------GYCREGQVEKAFQFR 287

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             +  +  +PD+ + N+LLR L   G  +   KL    IS+G   + VTY+ +IS LC++
Sbjct: 288 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 347

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC-KDGRLDLAIEFLDYMISDGCLPDIVN 336
           G+ E+A D+L   +EK L PD Y+Y+ ++ A    +G+++ A +F + M+     PD+  
Sbjct: 348 GRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFT 407

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            N +L   C  G  D AL++F      G   +  +YNT+ S L   G    A  +++EM 
Sbjct: 408 CNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEME 467

Query: 397 SK-GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            K G+ PD+ TYN++I   CR+G V++A      M    F+P + + NI++ G C+   +
Sbjct: 468 EKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGML 527

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +++++      KG   +  TY  +I G+   G   EA +L
Sbjct: 528 VKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL 568



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 19/433 (4%)

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---SRGMIESAFKVFDQLLR 169
           I  +   N+   A ++ +R++     P+++T N +I +L    S+  +  +  +F  +++
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201

Query: 170 DNCKPTVITYTILI-QATMLEGQTDKAM--KLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
              K  +     LI +        D A    +LD + +C+ G   Q+   +  L   G  
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P  I+YN ++      G+ E+  +   +M+ +  +P++ T +IL+  LC +G  ++A+ +
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC- 345
                 KG   DA +Y+ +IS  CK+GR + A + L  M      PD   YN IL A   
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
             G  ++A +   K+ +    P++ + N +   L + G    AL + +  +SKG   D +
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAA 464
           TYN++IS LC++G  +EA  LL +ME      P   +YN IILG+C+  ++ ++ +    
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS----MHAISRDTF-------KR 513
           M EK  KP+  T  +L+ G+   G   +A++L N  +S    + A++ +T         R
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 561

Query: 514 LNRTFPLLDVYKE 526
               F LL   KE
Sbjct: 562 FEEAFDLLAEMKE 574



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 182/369 (49%), Gaps = 10/369 (2%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT-----DKAM 196
           V  +  IG+  S      A ++F+++ R + KP ++T   LI A +           KA+
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAI 195

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL--NMGKWEEGEKLMTE 254
              + +    K  + +A   +  ++   C PD  SYN +L  L     GK ++    + E
Sbjct: 196 -FTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNE 254

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           ++  GL P+ +TY+ +I   CR+G+ E A        EK   PD ++ + L+   C +G 
Sbjct: 255 LLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 314

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           LD A++  +  IS G   D V YNTI++  CK G  ++A ++  ++ +    P+  +YN 
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNA 374

Query: 375 MFSALWSSGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           +  AL  +  ++ +A    ++M+ K  +PD  T N L+  LC +GM+D A+ L     S 
Sbjct: 375 ILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 434

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK-GCKPNETTYVLLIEGIGYGGWRAE 492
                 ++YN II G CK  R  E+ ++LA M EK G  P++TTY  +I G    G   +
Sbjct: 435 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEK 494

Query: 493 AMELANALV 501
           A +  N +V
Sbjct: 495 AFQFRNKMV 503



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 21/292 (7%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
           G  D +L    + ++ G   D V    +I    +E +  +A  ++ E+ EK   PD + Y
Sbjct: 313 GMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTY 372

Query: 110 NALISGFCKA-NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           NA++     A  Q+E A +  +++  + F PD+ T NI++  LC+ GM+++A K+F+  +
Sbjct: 373 NAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 432

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMV 210
                   +TY  +I     EG+ ++A  LL EM                  G C++G V
Sbjct: 433 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQV 492

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AFQF   +  +  +PD+ + N+LLR L   G   +  KL    IS+G   + VTY+ +
Sbjct: 493 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTI 552

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           IS LC++G+ E+A D+L   KEK L PD Y+Y+ ++ A    GR++ A EF+
Sbjct: 553 ISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME-AEEFM 603



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL------------------ 379
           +T + A+        A +IF ++  +   PN+ + NT+ +AL                  
Sbjct: 139 DTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTN 198

Query: 380 ---WSSGDKI-RALGMISEMLSKGIEPDEITYNSLISCL--CRDGMVDEAVGLLVDMEST 433
              +   +K+  A+G+I +M      PD  +YN+++  L  CR G  D+++  L ++  +
Sbjct: 199 VIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLES 258

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P  I+YN II G+C+  ++ ++ +    M EK  KP+  T  +L+ G+   G    A
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318

Query: 494 MELANALVS 502
           ++L N  +S
Sbjct: 319 LKLFNTWIS 327


>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 238/507 (46%), Gaps = 59/507 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI  S RAG  D +    + M A+GC+PD      L+    +    ++AVR++  +E
Sbjct: 191 YNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQME 250

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+VF Y  L+ GFC A ++E A ++LD+++ +G +P   TY  ++          
Sbjct: 251 GEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLV---------- 300

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC--KKGMVGQAFQF 216
               VF  L RD        Y +L  +  L  +T         M  C  KK M  +A +F
Sbjct: 301 --HGVFRCLERDK------AYRML--SDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEF 350

Query: 217 VRSLESRG------------------------CQ-----------PDVISYNMLLRTLLN 241
            + + +RG                        C+           P    Y M++++LLN
Sbjct: 351 AKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLN 410

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
              + +    +  M+ +GL  +V++Y+++I    + G  + A ++++  ++KG  P+  +
Sbjct: 411 CKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVT 470

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++ LIS Y K G +  A   L  ++  G +PDI+ + +++   C     D A   FE+++
Sbjct: 471 FNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMA 530

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           + G  PN  +YN +   L S+G   +A+ ++++M   G+ PD  ++N+LI   CR   VD
Sbjct: 531 EWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVD 590

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK-PNETTYVLL 480
           +A  +  DM      P   +YN +I   C  RR+N++ E+L A    GC   N  +Y  +
Sbjct: 591 KAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPI 650

Query: 481 IEGIGYGGWRAEAMELANALVSMHAIS 507
           +  +   G  +EA EL +  +S +A S
Sbjct: 651 VAALAKMGQFSEAGELMDKYLSRNAQS 677



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 129/282 (45%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            + ++G V  + + V  +   GC+        L+ +   +G      ++  +M   GL P
Sbjct: 127 ALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRP 186

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +   Y+ LI++  R G  + A    +     G  PD ++Y+ L+   C+ G +D A+  +
Sbjct: 187 STAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLV 246

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M  +G  P++  Y  ++  FC  G  ++A  + +K+ + G  P+ ++Y T+   ++  
Sbjct: 247 RQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRC 306

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            ++ +A  M+S+ L           ++++ CL +  M  EAV     M +  +     ++
Sbjct: 307 LERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAF 366

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            I++    K   +++  E+L +  + G  P    Y+++I+ +
Sbjct: 367 GIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSL 408



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +  ALW  G  + +  +++E+   G E  E    +L+    R G+   A  + V M   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
             RP+   YN +I    +   ++ +      M   GC+P+  TY  L+ G+   G   EA
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242

Query: 494 MELANAL--------VSMHAISRDTF---KRLNRTFPLLDVYKE 526
           + L   +        V  + +  D F    R+   F +LD  KE
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE 286


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 205/421 (48%), Gaps = 38/421 (9%)

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P +F +  ++    K N    A  +  ++  +G + ++VT NI+I      G   
Sbjct: 53  QKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNP 112

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLE-------------GQTDKAMKLLDEM--- 202
            +F VF  +L+    P VIT T LI+   L+             GQ   A++LL  +   
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                          MCK  +V +AF     + S G  PDV++Y+ L+     +GK ++ 
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDA 232

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L  +MI   ++P+V T++IL+   C+DGK ++   V     ++G+ P+  +Y  L+  
Sbjct: 233 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           YC   +++ A    + M   G  PD  +YN ++  FCK    D+A+ +F+K+      PN
Sbjct: 293 YCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPN 352

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V +Y ++   L  SG    AL ++ EM  +G+ PD ITY+S++  LC++  VD+A+ LL 
Sbjct: 353 VVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 412

Query: 429 DMESTRFRPT--------VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            ++   F           V +Y ++I GFC     NE++ +L+ M + G  P+  TY ++
Sbjct: 413 KLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEII 472

Query: 481 I 481
           I
Sbjct: 473 I 473



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 215/453 (47%), Gaps = 40/453 (8%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           +F K++    +   +  ++     M   G   ++V    LI  F Q  ++  +  V   I
Sbjct: 62  EFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANI 121

Query: 98  LEKYGEPDVF-------------AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
           L+K  +P+V              +Y  LI+G CK  Q   A ++L R+  +   P+VV Y
Sbjct: 122 LKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMY 181

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N +I S+C   ++  AF ++ +++ +   P V+TY+ LI    + G      KL D + +
Sbjct: 182 NTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVG------KLKDAIDL 235

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
             K ++               +PDV ++N+L+      GK +EG+ +   M+ +G++PNV
Sbjct: 236 FNKMIL------------ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 283

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY  L+   C   +   A  +     + G+ PD  SY+ +I+ +CK  ++D A+     
Sbjct: 284 VTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKK 343

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     +P++V Y +++   CK+G    AL++ +++ D G PP++ +Y+++  AL  +  
Sbjct: 344 MHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 403

Query: 385 KIRALGMIS--------EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             +A+ +++        ++  KG   D   Y  +I   C  G+ +EA+ LL  ME     
Sbjct: 404 VDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI 463

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           P   +Y IIIL   K    + + ++L  M  +G
Sbjct: 464 PDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 184/388 (47%), Gaps = 31/388 (7%)

Query: 26  PNTHLLSFDVK----ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           PN   L+  +K    +  +  LI    + G+   +L  +  +     +P+VVM   +I  
Sbjct: 128 PNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDS 187

Query: 82  FFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
             + +  N+A  +  E++ +   PDV  Y+ALISGF    +++ A  + +++      PD
Sbjct: 188 MCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPD 247

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           V T+NI++   C  G ++    VF  +++   KP V+TY  L+    L  Q +KA  + +
Sbjct: 248 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFN 307

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
            M                     G  PD  SYN+++     + K +E   L  +M  + +
Sbjct: 308 TMA------------------QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVVTY+ LI  LC+ GK   A+ ++    ++G+ PD  +Y  ++ A CK+ ++D AI 
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 321 FL----DYMISD----GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            L    D +  D    G   D+  Y  ++  FC  G  ++AL +  K+ D G  P+  +Y
Sbjct: 410 LLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGI 400
             +  +L+   +   A  ++ EM+++G+
Sbjct: 470 EIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 27/298 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   F  GK  +++     M+    KPDV     L+  F ++ K  +   V  ++ K G
Sbjct: 219 LISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 278

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y +L+ G+C   Q+  AN + + +   G +PD  +YNIMI   C    ++ A 
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAM 338

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++   N  P V+TYT LI                   G+CK G +  A + V  + 
Sbjct: 339 NLFKKMHCKNIIPNVVTYTSLID------------------GLCKSGKISYALKLVDEMH 380

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT--------EMISRGLEPNVVTYSILISS 273
            RG  PD+I+Y+ +L  L    + ++   L+T        ++  +G   +V  Y+++I  
Sbjct: 381 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQG 440

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            C  G   +A+ +L   ++ G  PDA +Y+ +I +  K    D+A + L  MI+ G L
Sbjct: 441 FCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 13/294 (4%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F R L  +   P +  +  +L +L+ +  +     L  +M  +G+  N+VT +ILI+   
Sbjct: 47  FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDA-------------YSYDPLISAYCKDGRLDLAIEFL 322
           + G+   +  V     +KG  P+               SY  LI+  CK G+   A++ L
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             +      P++V YNTI+ + CK    ++A +++ ++   G  P+V +Y+ + S  +  
Sbjct: 167 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIV 226

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+ + ++M+ + I+PD  T+N L+   C+DG + E   +   M     +P V++Y
Sbjct: 227 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 286

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             ++ G+C  +++N++  +   M + G  P+  +Y ++I G        EAM L
Sbjct: 287 CSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNL 340



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 13/183 (7%)

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P I  +  IL +  K      A+ +  ++   G   N+ + N + +     G    +  +
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 392 ISEMLSKGIEPDEIT-------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
            + +L KG +P+ IT             Y +LI+ LC+ G    A+ LL  ++    +P 
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
           V+ YN II   CK + +NE+ ++ + M  +G  P+  TY  LI G    G   +A++L N
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237

Query: 499 ALV 501
            ++
Sbjct: 238 KMI 240


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 201/393 (51%), Gaps = 27/393 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD + YN ++ G C A + E A +++  +      P+ VT+   I S C  G+++ A ++
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            DQ+ R  C P V+ Y+ LI     +G  D+A+ LL+ M                     
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM--------------------- 103

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C+P+ + YN  L+ L    +WE+  +LM EM+ +G  PN  T+S+LISSLC++   + A
Sbjct: 104 LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSA 163

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V+VL   ++ G  PD  +Y+ +I++  + GR+D A+  L+ M+   C PD + +N +L  
Sbjct: 164 VEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKG 220

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FC+      A E+  ++    CP    ++N +   L  +G    A  +  +M      PD
Sbjct: 221 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPD 280

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY+SL++     G+V+ A+ L   M     +P + SYN ++ G C+  R  ++ E++A
Sbjct: 281 IVTYSSLLNGFSEQGLVEVAIQLFRSMPC---KPDIFSYNAVLKGLCRAARWEDAGELIA 337

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M  K C PNE T+ +LI  +   G    A+E+
Sbjct: 338 EMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 370



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 214/416 (51%), Gaps = 33/416 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   +   I  FC+   ++ A ++LD++   G +PDVV Y+ +I     +G ++ A  +
Sbjct: 40  PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            + +L   CKP  + Y   ++   +  + +   +L+ EM                  +C+
Sbjct: 100 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 156

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
             +V  A + +  +E  GC+PD ++YN+++ +L   G+ ++  +L+  M+ +   P+ + 
Sbjct: 157 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALG 213

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           ++ ++   CR  +  DA +++             +++ LI   C++G ++ A +  + M 
Sbjct: 214 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
              C PDIV Y+++L  F + G  + A+++F  +    C P++ SYN +   L  +    
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWE 330

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +I+EM+ K   P+E+T+N LI+ LC+ G+VD A+ +L  M +    P + +YN +I
Sbjct: 331 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            GF +  R+++++++L+ M    CKP+  +Y   ++G+     RAE  + A  LV+
Sbjct: 391 NGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLC----RAERWQDAEELVA 439



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 176/337 (52%), Gaps = 26/337 (7%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F  LI    +    D ++  +E M   GC+PD V    +I    +  + + A+R++
Sbjct: 143 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 202

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +    +PD   +NA++ GFC+A +   A++++ ++         +T+NI+I  LC  G
Sbjct: 203 NSM--VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNG 260

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
           ++  A +VF+Q+ R  C P ++TY+ L+                   G  ++G+V  A Q
Sbjct: 261 LVNYATQVFEQMPRYRCTPDIVTYSSLLN------------------GFSEQGLVEVAIQ 302

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
             RS+    C+PD+ SYN +L+ L    +WE+  +L+ EM+ +   PN VT++ILI+SLC
Sbjct: 303 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 359

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           + G  + A++VL      G TPD ++Y+ LI+ + + GRLD A++ L  M    C PD +
Sbjct: 360 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAI 416

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           +YN+ L   C+      A E+  ++    C PN  ++
Sbjct: 417 SYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 198/421 (47%), Gaps = 57/421 (13%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            E  F   I+   + G  D ++  ++ M   GC PDVV+ + LI  F ++   ++A+ ++
Sbjct: 41  NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 100

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +    +P+   YNA + G C A + E   +++  +  +G SP+  T++++I SLC   
Sbjct: 101 NTM--LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNN 158

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
           +++SA +V +Q+ +  C+P  + Y I+I +    G+ D A++LL+ M             
Sbjct: 159 LVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVL 218

Query: 203 ------------------------------------GMCKKGMVGQAFQFVRSLESRGCQ 226
                                                +C+ G+V  A Q    +    C 
Sbjct: 219 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCT 278

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD+++Y+ LL      G  E   +L   M  +   P++ +Y+ ++  LCR  + EDA ++
Sbjct: 279 PDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGEL 335

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           +     K   P+  +++ LI++ C+ G +D AIE L+ M + G  PDI  YN ++  F +
Sbjct: 336 IAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSE 395

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D AL++   LS + C P+  SYN+    L  +     A  +++EML     P+E+T
Sbjct: 396 QGRLDDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 452

Query: 407 Y 407
           +
Sbjct: 453 F 453



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 41/259 (15%)

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD Y+Y+ ++   C   + + A E +  MI + C P+ V + T + +FC+NG  D+A+
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI---------------------- 392
           ++ +++   GC P+V  Y+T+ +     G   +AL ++                      
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 122

Query: 393 ----------SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                     +EM+ KG  P+E T++ LIS LC++ +VD AV +L  ME     P  ++Y
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           NIII    +  R+++++ +L +M    CKP+   +  +++G      RAE    A+ L++
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFC----RAERWHDASELIA 235

Query: 503 MHAISRDTFKRLNRTFPLL 521
              + RD    +  TF +L
Sbjct: 236 Q--MFRDDCPLIEMTFNIL 252


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 193/397 (48%), Gaps = 18/397 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD+   + LI+ FC    I LA  V   +  RGF P+ +T N +I  LC RG I+ A   
Sbjct: 90  PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYF 149

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            DQL+    +   ++Y  LI                   G+CK G      + +R LE  
Sbjct: 150 HDQLVAQGFQLDQVSYGTLIN------------------GLCKTGETKAVARLLRKLEGH 191

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
             +PDV+ YN ++ +L       +   + +EMI +G+ P+VVTY+ LI   C  G  ++A
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L   K K + P+  +++ LI A  K+G++  A   L  M+     PD+  YN+++  
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +        A  +F  ++  G  P+V  Y  M + L  +     A+ +  EM  K + PD
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TYNSLI  LC++  ++ A+ L   M+    +P V SY I++ G CK+ R+ ++ E+  
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            +  KG   N   Y +LI  +   G+  EA++L + +
Sbjct: 432 RLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 199/409 (48%), Gaps = 19/409 (4%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
           +++  G  P+ +    LIK      +  KA+   + L   G + D  +Y  LI+G CK  
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + +   ++L +L      PDVV YN +I SLC   ++  A  V+ +++     P V+TYT
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
            LI                   G C  G + +AF  +  ++ +   P+V ++N+L+  L 
Sbjct: 237 TLIH------------------GFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALS 278

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             GK +E + L+  M+   ++P+V TY+ LI       + + A  V  +  ++G+TPD  
Sbjct: 279 KEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQ 338

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
            Y  +I+  CK   +D A+   + M     +PDIV YN+++   CKN + ++A+ + +++
Sbjct: 339 CYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM 398

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + G  P+V SY  +   L  SG    A  +   +L+KG   +   Y  LI+ LC+ G  
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           DEA+ L   ME     P  ++++III    +    +++ ++L  M  +G
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 18/376 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G+  ++LYF + +VA G + D V    LI    +  ++    R++  LE + 
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  YN +I+  CK   +  A  V   +  +G SPDVVTY  +I   C  G ++ AF
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            + +++   N  P V T+ ILI A   EG+  +A  LL  M                 G 
Sbjct: 253 SLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGY 312

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                V  A     S+  RG  PDV  Y  ++  L      +E   L  EM  + + P++
Sbjct: 313 FLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDI 372

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI  LC++   E A+ + +  KE+G+ PD YSY  L+   CK GRL+ A E    
Sbjct: 373 VTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           +++ G   ++  Y  ++   CK G  D+AL++  K+ D GC P+  +++ +  AL+   +
Sbjct: 433 LLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492

Query: 385 KIRALGMISEMLSKGI 400
             +A  ++ EM+++G+
Sbjct: 493 NDKAEKILREMIARGL 508



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 142/282 (50%), Gaps = 19/282 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G   E+   +  M      P+V     LI    +E K  +A  ++ ++ K   +PDVF Y
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+LI G+   ++++ A  V   +  RG +PDV  Y  MI  LC   M++ A  +F+++  
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            N  P ++TY  LI                   G+CK   + +A    + ++ +G QPDV
Sbjct: 366 KNMIPDIVTYNSLID------------------GLCKNHHLERAIALCKRMKEQGIQPDV 407

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            SY +LL  L   G+ E+ +++   ++++G   NV  Y++LI+ LC+ G  ++A+D+   
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSK 467

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            ++KG  PDA ++D +I A  +    D A + L  MI+ G L
Sbjct: 468 MEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 18/239 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK  E+   +  M+    KPDV     LI  +F   +   A  V   + 
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PDV  Y  +I+G CK   ++ A  + + ++ +   PD+VTYN +I  LC    +E
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  ++     +P V +YTIL+      G+ + A ++   +                
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLI 449

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             +CK G   +A      +E +GC PD +++++++R L    + ++ EK++ EMI+RGL
Sbjct: 450 NRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           PP    +N + S+L ++      + +  +    GI PD  T + LI+C C    +  A  
Sbjct: 54  PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           +  ++    F P  I+ N +I G C    I +++     +  +G + ++ +Y  LI G+ 
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173

Query: 486 YGGWRAEAMELANALVSMHAISRDT 510
             G       L   L   H++  D 
Sbjct: 174 KTGETKAVARLLRKLEG-HSVKPDV 197



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 57/137 (41%)

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
           PP      T+ S   S      A+   + ML     P    +N+++S L  +      + 
Sbjct: 19  PPIAIPTATLHSQPHSHHHHHHAVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVIS 78

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L    E     P + + +I+I  FC    I  +  V A + ++G  PN  T   LI+G+ 
Sbjct: 79  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLC 138

Query: 486 YGGWRAEAMELANALVS 502
           + G   +A+   + LV+
Sbjct: 139 FRGEIKKALYFHDQLVA 155


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 227/489 (46%), Gaps = 55/489 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           R G  DE+  F   + + G KP  V    L+  F +    ++A+ V+ E+ E    PD  
Sbjct: 305 REGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAV 364

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++ + +A   E    V+D + S+G  P+ VTY  +I +    G I+ A ++FDQ+
Sbjct: 365 TYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM 424

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMV 210
           +   C P V TY  ++     +  +++ MK+L  M                 MC KKGM 
Sbjct: 425 MELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMH 484

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               Q  R +++ G +PD  ++N L+      G   +  K+  EMI  G  P + TY+ L
Sbjct: 485 KYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNAL 544

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +++L R G  + A  V+   + KG  P   SY  ++ +Y K G +   IE ++  I DG 
Sbjct: 545 LNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK-GIEMIEKSIYDGD 603

Query: 331 L------------------------------------PDIVNYNTILAAFCKNGNADQAL 354
           +                                    PD+V  N++L+ F KN   D+A 
Sbjct: 604 IFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAH 663

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+   + D G  P++ ++N++       GD  +A  ++  + + G +PD ++YN++I   
Sbjct: 664 EMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGF 723

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           CR G++ E + +L +M S    P + +YN  I G+       E  +V++ M    C+PNE
Sbjct: 724 CRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNE 783

Query: 475 TTYVLLIEG 483
            TY ++ +G
Sbjct: 784 LTYKIVADG 792



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 199/402 (49%), Gaps = 18/402 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D  A   ++    + +Q  +A+K+ D +    +  DV  Y  ++ +    G    A ++F
Sbjct: 186 DRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIF 245

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM----------------GMC-K 206
           +++      P+++TY +++      G++ DK ++LLDEM                  C +
Sbjct: 246 ERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           +G++ +A +F   L+S G +P  ++YN LL      G + E   +++EM      P+ VT
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ ++++  R G  E+   V+ A   KG+ P+A +Y  +I+AY + G +D A+E  D M+
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMM 425

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             GC+P++  YN +L    K   +++ ++I   +   GC PN  ++NTM +     G   
Sbjct: 426 ELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHK 485

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
               +  EM + G EPD  T+N+LIS   R G  ++A  +  +M    F P + +YN ++
Sbjct: 486 YVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALL 545

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
               +      +  V+  M  KG +P+ET+Y L++     GG
Sbjct: 546 NALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGG 587



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR-LDLAIEF 321
           +V  Y+ ++ +  R GK   A+++     E GL+P   +Y+ ++  Y K GR  D  +E 
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M S G   D    +T+L+A  + G  D+A E F  L   G  P   +YN +      
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +G    AL ++SEM      PD +TYN +++   R G  +E   ++  M S    P  ++
Sbjct: 341 AGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVT 400

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           Y  II  + +   I++++E+   M E GC PN  TY  ++  +G      E M++
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKI 455



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 20/316 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G +PD      LI  + +   +N A ++ E + K G  P +  YNAL++   +    + A
Sbjct: 498 GFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAA 557

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
             V+  +R++GF P   +Y++M+ S    G ++    +   +   +  P+ +    L+ A
Sbjct: 558 ESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLA 617

Query: 186 TM----LEGQTDKAMKLLDEMG--------------MCKKGMVGQAFQFVRSLESRGCQP 227
                 L G  ++A + L + G                K  M  +A + +R +   G QP
Sbjct: 618 NFKCRSLTGM-ERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQP 676

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D++++N L+      G   + E+++  + + G +P++V+Y+ +I   CR G  ++ + +L
Sbjct: 677 DLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRIL 736

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 G+ P  ++Y+  IS Y   G      + + YMI   C P+ + Y  +   +CK 
Sbjct: 737 SEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796

Query: 348 GNADQALEIFEKLSDV 363
              D+A++   K+ DV
Sbjct: 797 RRYDEAIDFVSKIKDV 812



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 59/392 (15%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           +E +  +  M  NGC P+ +    ++    ++       +V   ++  G EPD   +N L
Sbjct: 450 EEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTL 509

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           IS + +      A K+ + +   GFSP + TYN ++ +L  RG  ++A  V   +     
Sbjct: 510 ISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGF 569

Query: 173 KPTVITYTILIQA---------------TMLEGQTDKAMKLLDEMGMCK---KGMVG--Q 212
           +P+  +Y++++ +               ++ +G    +  LL  + +     + + G  +
Sbjct: 570 RPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMER 629

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AFQ   +L+  G +PD++  N +L        ++   +++  +   GL+P++VT++ L+ 
Sbjct: 630 AFQ---ALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMD 686

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
              R G    A +VLR  +  G  PD  SY+ +I  +C+ G +   I  L  M S G  P
Sbjct: 687 MYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGP 746

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            I  YNT ++ +   G       +F +++DV                            I
Sbjct: 747 CIFTYNTFISGYAAQG-------MFTEINDV----------------------------I 771

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           S M+     P+E+TY  +    C+    DEA+
Sbjct: 772 SYMIVHNCRPNELTYKIVADGYCKARRYDEAI 803



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 8/283 (2%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMT-EMISRGLEPNVV---TYSILISSLCRDGKTE 281
           Q D+IS   LL+ L   G WE+   L    +++ G+    +      +++  L R+ +  
Sbjct: 148 QVDLIS---LLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHT 204

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +           D  +Y  ++ AY + G+   AIE  + M   G  P +V YN +L
Sbjct: 205 VASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVML 264

Query: 342 AAFCKNGNA-DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
             + K G + D+ LE+ +++   G   +  + +T+ SA    G    A    S + S+G 
Sbjct: 265 DVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGY 324

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +P  +TYN+L+    + G+  EA+ +L +ME     P  ++YN ++  + +     E   
Sbjct: 325 KPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAV 384

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           V+ AM  KG  PN  TY  +I   G  G   +A+E+ + ++ +
Sbjct: 385 VIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMEL 427


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 225/490 (45%), Gaps = 54/490 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    + G+   + Y  + M+  G  PDV M + ++  F ++ K ++A   ++ +E  G
Sbjct: 163 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 222

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP++  Y++LI+G+     +E A  VL  +  +G S +VVTY ++I   C +  ++ A 
Sbjct: 223 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 282

Query: 162 KVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           KV   +  +    P    Y +LI      G+ D A++LLDEM                 G
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 342

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CK+G + +A   +  +     +PD  SYN LL      G   E   L  +M+  G+EP 
Sbjct: 343 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 402

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL------------------ 305
           V+TY+ L+  LCR G  +DA+ +     ++G+ PD   Y  L                  
Sbjct: 403 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 462

Query: 306 -----------------ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                            IS  CK G++  A E  D M   GC PD + Y T++  +CK  
Sbjct: 463 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 522

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  QA ++   +      P++  YN++ S L+ S   +    +++EM  +G+ P+ +TY 
Sbjct: 523 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 582

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C++GM+D+A     +M        +I  + ++ G  +  RI+E+  ++  M + 
Sbjct: 583 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 642

Query: 469 GCKPNETTYV 478
           G  P+   ++
Sbjct: 643 GFFPDHECFL 652



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 223/453 (49%), Gaps = 18/453 (3%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    T F  ++K     G    +LY  ++M   G  P +  C  L+    +  +++ A 
Sbjct: 118 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V + + + G  PDVF  + +++ FCK  +++ A   + ++ + G  P++VTY+ +I   
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            S G +E+A  V   +        V+TYT+LI+    + + D+A K+L       +GM  
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL-------RGMQE 290

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A             PD  +Y +L+      GK ++  +L+ EM+  GL+ N+   + LI
Sbjct: 291 EA----------ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 340

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G+  +A  V+    +  L PD+YSY+ L+  YC++G    A    D M+ +G  
Sbjct: 341 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P ++ YNT+L   C+ G  D AL+I+  +   G  P+   Y+T+   L+   +   A  +
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             ++L++G     IT+N++IS LC+ G + EA  +   M+     P  I+Y  +I G+CK
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              + ++ +V  AM  +   P+   Y  LI G+
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 203/458 (44%), Gaps = 51/458 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G   E+    + M+  G +P V+    L+K   +    + A+++  ++ K G  PD  
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 439

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ L+ G  K    E A+ +   + +RGF+   +T+N MI  LC  G +  A ++FD++
Sbjct: 440 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 499

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
               C P  ITY  LI                   G CK   VGQAF+   ++E     P
Sbjct: 500 KDLGCSPDGITYRTLID------------------GYCKASNVGQAFKVKGAMEREPISP 541

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +  YN L+  L    +  E   L+TEM  RGL PN+VTY  LI   C++G  + A    
Sbjct: 542 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 601

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI------------- 334
               E GL+ +      ++S   + GR+D A   +  M+  G  PD              
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 661

Query: 335 -------------------VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
                              + YN  +A  CK G  D A   F  LS  G  P+  +Y T+
Sbjct: 662 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 721

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                ++G+   A  +  EML +G+ P+ +TYN+LI+ LC+   VD A  L   +     
Sbjct: 722 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 781

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
            P V++YN +I G+CK   ++ + ++   M E+G  P+
Sbjct: 782 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 205/433 (47%), Gaps = 59/433 (13%)

Query: 125 ANKVLDRL----RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
            N + D L    R   FSP V  +++++     +G+ ++A  VFD + +    P++ +  
Sbjct: 104 GNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCN 161

Query: 181 ILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR 223
            L+   +  G+T  A  +  +M                   CK G V +A  FV+ +E+ 
Sbjct: 162 SLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL 221

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G +P++++Y+ L+   +++G  E  + ++  M  +G+  NVVTY++LI   C+  K ++A
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281

Query: 284 VDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
             VLR  +E+  L PD  +Y  LI  YC+ G++D A+  LD M+  G   ++   N+++ 
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 341

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK G   +A  +  ++ D    P+  SYNT+       G    A  +  +ML +GIEP
Sbjct: 342 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 401

Query: 403 DEITYNSLISCLCRDGMVDEA----------------VG-------------------LL 427
             +TYN+L+  LCR G  D+A                VG                   L 
Sbjct: 402 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 461

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            D+ +  F  + I++N +I G CK  ++ E+ E+   M + GC P+  TY  LI+G    
Sbjct: 462 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 521

Query: 488 GWRAEAMELANAL 500
               +A ++  A+
Sbjct: 522 SNVGQAFKVKGAM 534



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 171/426 (40%), Gaps = 85/426 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKY 101
           L+K   R G FD++L     M+  G  PD V  + L+   F+ E     +    +IL + 
Sbjct: 409 LLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 468

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  +N +ISG CK  ++  A ++ D+++  G SPD +TY  +I   C    +  AF
Sbjct: 469 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 528

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM----------------- 204
           KV   + R+   P++  Y  LI       +  +   LL EMG+                 
Sbjct: 529 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 588

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG----- 259
           CK+GM+ +AF     +   G   ++I  + ++  L  +G+ +E   LM +M+  G     
Sbjct: 589 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648

Query: 260 ---------------------------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
                                      L PN + Y+I I+ LC+ GK +DA         
Sbjct: 649 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 708

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI------------------ 334
           KG  PD ++Y  LI  Y   G +D A    D M+  G +P+I                  
Sbjct: 709 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 768

Query: 335 -----------------VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                            V YNT++  +CK GN D A ++ +K+ + G  P++        
Sbjct: 769 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNLLESV 828

Query: 378 ALWSSG 383
           ++W  G
Sbjct: 829 SMWLVG 834



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 150/353 (42%), Gaps = 50/353 (14%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
            F      F  +I    + GK  E+    + M   GC PD +    LI  + +     +A
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 527

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            +V   +E+    P +  YN+LISG  K+ ++     +L  +  RG +P++VTY  +I  
Sbjct: 528 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 587

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
            C  GM++ AF  + ++  +     +I  + ++      G+ D+A  L+ +M        
Sbjct: 588 WCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647

Query: 203 -----------------------------------------GMCKKGMVGQAFQFVRSLE 221
                                                    G+CK G V  A +F   L 
Sbjct: 648 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 707

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +G  PD  +Y  L+      G  +E  +L  EM+ RGL PN+VTY+ LI+ LC+    +
Sbjct: 708 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 767

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            A  +     +KGL P+  +Y+ LI  YCK G +D A +  D MI +G  P I
Sbjct: 768 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 240/514 (46%), Gaps = 56/514 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVV------------MCTKLIKKFF------- 83
           L+    RAGKFD  ++  + MV +GC+   V             C  L++K++       
Sbjct: 167 LLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKG 226

Query: 84  ----------------QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
                           Q  +     R++  ++K+G  PD++A N  +   CK N++  A 
Sbjct: 227 FCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDAL 286

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           K L+ +  RG +PDVVTY  ++G LC       A +++++++R   KP ++   +LI   
Sbjct: 287 KTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLI--- 343

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK   V +AF+    + S   + +V  YN L+   L  G   
Sbjct: 344 ---------------FGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSIN 388

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDAYSYDPL 305
           +  K+++ M + G EP+VVTY+I ++  C  G  ++A  ++   +  G+  PD YSY+ +
Sbjct: 389 KAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQM 448

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +   CK  +LD A  F+   +  G   DIV+ N ++ AFCK      AL++F+++   G 
Sbjct: 449 LKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGI 508

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             +  +Y T+ + L+  G    A  +  +ML   + P+   YN ++  LC+ G  ++A  
Sbjct: 509 QADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQK 568

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           + + M      P +I++N +I    K  R  E+I++   M  +G +P+  T+  LI G+ 
Sbjct: 569 IFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLL 628

Query: 486 YGGWRAEAMELANALVSMHAI-SRDTFKRLNRTF 518
             G   +A E+   ++    I  RD   RL   F
Sbjct: 629 EEGKATQAYEVWEYMLENGIILDRDVSDRLISMF 662



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 203/443 (45%), Gaps = 34/443 (7%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           FA   ++S     +   L ++ L+R+RS+G +     Y I++      G  +S    FD+
Sbjct: 127 FAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDE 186

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKL----LDE-------------MGMCKKGM 209
           ++   C+   + Y   I   +     D   K     LD+               +C+   
Sbjct: 187 MVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSER 246

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +    + +  ++  GC PD+ + N+ +  L    +  +  K +  M  RG  P+VVTY+ 
Sbjct: 247 IELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTT 306

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++  LC + +  +AV++      +GL PD  +   LI   CK  ++D A E    M+S  
Sbjct: 307 VVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLN 366

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              ++  YN +++ F ++G+ ++A +I   +   GC P+V +YN   +   ++G    A 
Sbjct: 367 LELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAE 426

Query: 390 GMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
            +I EM   GI  PD  +YN ++  LC+   +D A G + D         ++S NI+I  
Sbjct: 427 KLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDA 486

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           FCK ++++ ++++   M  KG + +  TY  LI G+ YG             V  + ++ 
Sbjct: 487 FCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGL-YG-------------VGYYYLAE 532

Query: 509 DTFKRL--NRTFPLLDVYKEISH 529
           + F+++   R  P +++Y  + H
Sbjct: 533 EIFEQMLKARVVPNVNLYNIMLH 555



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 35/265 (13%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G +      + ++S L  D       + L   + +G+      Y  L+S Y + G+ D  
Sbjct: 121 GFDHTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSV 180

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD--------------------------- 351
           I   D M++ GC    V+YN  +    KN   D                           
Sbjct: 181 IHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISA 240

Query: 352 ----QALEIFEKL----SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
               + +E+ E+L       GC P++ + N     L        AL  +  M  +G  PD
Sbjct: 241 LCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPD 300

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY +++ CLC +    EAV L  +M     +P +++  ++I G CK+ +++E+ E+  
Sbjct: 301 VVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELAL 360

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGG 488
            M     + N   Y  LI G    G
Sbjct: 361 RMLSLNLELNVCIYNALISGFLRSG 385



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 89/213 (41%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A    G     ++   ++S    D    L  EFL+ + S G       Y  +L+ + + G
Sbjct: 116 AESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRSLYRILLSGYVRAG 175

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D  +  F+++   GC      YN     L  +          S  L KG      TY+
Sbjct: 176 KFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYS 235

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
             IS LC+   ++    LL DM+     P + + NI +   CK  R++++++ L  M+ +
Sbjct: 236 RWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIR 295

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G  P+  TY  ++  +      AEA+EL   +V
Sbjct: 296 GTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMV 328


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 27/453 (5%)

Query: 33  FDVKET--QFMKLIKRSFRAGKFDESLYF----IESMVANGCKPDVVMCTKLIKKFFQER 86
           F  K+T   F  ++    + G FD +L F    I+S   +  +P+ +    +IK   +  
Sbjct: 130 FHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVG 189

Query: 87  KSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
             ++AV V   + ++    D + Y+ L+ G C   +I+ A  +LD ++  G  P+ V +N
Sbjct: 190 NVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFN 249

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           ++I +LC +G +  A K+ D +    C P  +TY  L+    L+G+ DKAM LL+ M   
Sbjct: 250 VLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVAN 309

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K                  C P+ I++  L+   +  G+  +G +++  +  +G   N  
Sbjct: 310 K------------------CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 351

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +YS LIS L ++GK E  + + +   EKG  P+   Y  LI   C++G+ D A E+L  M
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
            + G  P+   Y++++  + + G+  +A+ ++++++D  C  +   Y+ + + L  +G  
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYN 443
             AL +  +MLS+GI+ D + Y+S+I   C   +V++ + L   M   + + +P V++YN
Sbjct: 472 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 531

Query: 444 IIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           I++  FC    ++ +I++L  M ++GC P+  T
Sbjct: 532 ILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 199/408 (48%), Gaps = 26/408 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSLCSRGMIE 158
           E  VF   + I  F    +  L  K LD     G        V ++N ++  +   G  +
Sbjct: 94  ENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFD 153

Query: 159 SAFKVFDQLLRDNC----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
            A + ++ ++  N     +P  +++ ++I+A                  +C+ G V QA 
Sbjct: 154 LALEFYNHVIDSNSFSNIQPNGLSFNLVIKA------------------LCRVGNVDQAV 195

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +  R +  R C  D  +Y+ L+  L N G+ +E   L+ EM   G  PN V +++LIS+L
Sbjct: 196 EVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISAL 255

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ G    A  ++     KG  P+  +Y+ L+   C  G+LD A+  L+ M+++ C+P+ 
Sbjct: 256 CKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPND 315

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           + + T++  F K+G A   + +   L + G   N  SY+++ S L+  G     + +  E
Sbjct: 316 ITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKE 375

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ KG +P+ I Y++LI  LCR+G  DEA   L++M++    P   +Y+ ++ G+ +   
Sbjct: 376 MVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGD 435

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           I+++I V   M +  C  +E  Y +LI G+   G   EA+ +   ++S
Sbjct: 436 IHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLS 483



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 31/316 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+      GK D+++  +  MVAN C P+ +    L+  F +  ++   VRV+ 
Sbjct: 280 EVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLV 339

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            LE+ G   + F+Y++LISG  K  + E   ++   +  +G  P+ + Y+ +I  LC  G
Sbjct: 340 SLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREG 399

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             + A +   ++      P   TY+ L+      G   KA+ +  EM             
Sbjct: 400 KPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYS 459

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G + +A    + + SRG + DV++Y+ ++    N    E+G KL  +M+  
Sbjct: 460 ILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCH 519

Query: 259 G--LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY------C 310
              L+P+VVTY+IL+++ C       A+D+L    ++G  PD  + D  +          
Sbjct: 520 NPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPP 579

Query: 311 KDGRLDLAIEFLDYMI 326
           +DGR     EFLD ++
Sbjct: 580 QDGR-----EFLDELV 590



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 6/224 (2%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           S+  +  AY K      A++    M ++  C   + ++NT+L    + G  D ALE +  
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161

Query: 360 LSDVGC----PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + D        PN  S+N +  AL   G+  +A+ +   M  +    D  TY++L+  LC
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC 221

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
            +G +DEAV LL +M+     P  +++N++I   CK   ++ + +++  MF KGC PNE 
Sbjct: 222 NEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEV 281

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRLNRTF 518
           TY  L+ G+   G   +AM L N +V+   +  D TF  L   F
Sbjct: 282 TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGF 325


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 18/454 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+F  +L  +E M  +  + DV     +I K  + ++S +A  +++ + K    PD  
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF +  +I  A  V + +  +   P V TY  MI   C    I+ A  +  ++
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEM 391

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P+ +TY+ L+           A+ L++++                 G C+ G +
Sbjct: 392 QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEI 451

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A Q ++S+   G  PDVI+Y+ L+  +  M K  E +++++ M   G+ PN V Y+ L
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ G  ++A+        +GL  +   ++ L+ A+ ++G +  A  F  YM     
Sbjct: 512 ICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNI 571

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             D V++N I+ ++C  GN   A  +++ +   G  PNV +Y  +   L   G  ++A  
Sbjct: 572 SFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQ 631

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +S +L      DE T+N+L+  +CR G +DEA+ L   M      P + +Y I++ GFC
Sbjct: 632 FMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFC 691

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  +I  ++ +L  M EKG  P+   Y  L+ G+
Sbjct: 692 RKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 229/468 (48%), Gaps = 23/468 (4%)

Query: 31   LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            + F + E  F  L+    R G  DE+L   E M+ N C PD+   T L+  F ++ K   
Sbjct: 639  IPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILP 698

Query: 91   AVRVMEI-LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYN-IM 147
            A+ ++++ LEK   PD  AY  L++G     Q++ A+ V   +  + G   D + YN +M
Sbjct: 699  ALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLM 758

Query: 148  IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
             G L SR  + +  ++   + ++   P   +Y IL+   +  GQ  K++ L   M     
Sbjct: 759  NGYLKSRN-VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM----- 812

Query: 208  GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
                     VR    +G +PD ++Y +L+  L   G  +   K + +M+  G+ P+ + +
Sbjct: 813  ---------VR----KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVF 859

Query: 268  SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             ILI++     K  +A+ V    K   ++P + ++  +I+   + G LD + + L  M+ 
Sbjct: 860  DILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQ 919

Query: 328  DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
             G  P+  +Y  ++ A C+ G  D+A  + E++  +G  P   + +++   L   G    
Sbjct: 920  VGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEE 979

Query: 388  ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
            A+ + S M+  G+ P   T+ +L+  LC++  + +A+ L   ME  R R  V+SYN++I 
Sbjct: 980  AVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLIT 1039

Query: 448  GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            G CK + I++++++   M  KG  PN TTY+ L  G  Y   R +  E
Sbjct: 1040 GLCKDKHISDALDLYGEMKSKGLWPNITTYITL-TGAMYSTGRVQNGE 1086



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 217/484 (44%), Gaps = 19/484 (3%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI   FR GK + + Y    M+     P V   T +I  + + R+ +KA+ ++ 
Sbjct: 330 ECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILS 389

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G  P    Y+AL++G+CK + +  A  +++ L+SRG + +     I+I   C  G
Sbjct: 390 EMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVG 449

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------ 203
            I  A ++   +  D   P VITY+ LI       +  +  ++L  M             
Sbjct: 450 EISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYT 509

Query: 204 -----MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                 CK G V +A +    +  RG   + + +N LL      G   E E     M   
Sbjct: 510 TLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRM 569

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
            +  + V+++ +I S C  G    A  V       G +P+  +Y  L+   C+ G L  A
Sbjct: 570 NISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQA 629

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            +F+  ++      D   +N +L   C+ G  D+AL++ EK+    C P++ +Y  + S 
Sbjct: 630 RQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSG 689

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRP 437
               G  + AL ++  ML KG+ PD + Y  L++ L  +G V  A  +  ++        
Sbjct: 690 FCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYA 749

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             I+YN ++ G+ K+R +N    +++ M++    PN  +Y +L+ G    G  ++++ L 
Sbjct: 750 DCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLY 809

Query: 498 NALV 501
             +V
Sbjct: 810 KYMV 813



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 225/473 (47%), Gaps = 19/473 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            L+   +R G   E+ +F + M       D V   ++I  +        A  V + + +YG
Sbjct: 546  LLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYG 605

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              P+V  Y  L+ G C+   +  A + +  L    F+ D  T+N ++  +C  G ++ A 
Sbjct: 606  YSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEAL 665

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
             + ++++++NC P + TYTIL+     +G+   A+ +L  M                 G+
Sbjct: 666  DLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725

Query: 205  CKKGMVGQA-FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
              +G V  A + F   +   G   D I+YN L+   L        +++M++M    + PN
Sbjct: 726  INEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPN 785

Query: 264  VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
              +Y+IL+    + G+   ++ + +    KG+ PD  +Y  LI    + G +D+A++FL+
Sbjct: 786  SASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLE 845

Query: 324  YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             M+ +G  PD + ++ ++ AF +      AL++F  +  +   P+  +++ M + L   G
Sbjct: 846  KMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKG 905

Query: 384  DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYN 443
                +  ++ EML  G++P+   Y +L++  CR G +D A  L  +M++    P  ++ +
Sbjct: 906  YLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAES 965

Query: 444  IIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             II G C+  ++ E++ V ++M   G  P   T+  L+  +      A+A+ L
Sbjct: 966  SIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHL 1018



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 19/425 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           ++  + ++ +   A+ V+E +E+   + DV+ YN +I   C+  +   A  +L R+R   
Sbjct: 266 ILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDD 325

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
            +PD  TYN +I      G I  A  VF+ +LR N  P+V TYT +I       + DKA+
Sbjct: 326 LTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKAL 385

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            +L EM                  +  G  P  ++Y+ LL     +        LM ++ 
Sbjct: 386 SILSEM------------------QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLK 427

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           SRG+  N    +ILI   C+ G+   A  +L++  E G+ PD  +Y  LI+  C+  ++ 
Sbjct: 428 SRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMH 487

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
              E L  M   G LP+ V Y T++  +CK G   +AL+ F  +   G   N   +N + 
Sbjct: 488 ETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALL 547

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
            A +  G    A      M    I  D +++N +I   C  G +  A  +  DM    + 
Sbjct: 548 HAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYS 607

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P V +Y  ++ G C+   + ++ + ++ + +     +E T+  L+ GI   G   EA++L
Sbjct: 608 PNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDL 667

Query: 497 ANALV 501
              ++
Sbjct: 668 CEKMI 672



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 192/441 (43%), Gaps = 25/441 (5%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           L+K + +ERK   A   +  ++  G +    + N +++   +  + +     L    +R 
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARK 221

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKA 195
           F   V T NI++ SLC+ G    A  +  ++   +C     +TY  ++   + +G+   A
Sbjct: 222 FPLGVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYNTILHWYVKKGRFKAA 279

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           + +L++M                  E    Q DV +YN+++  L  + +      L+  M
Sbjct: 280 LCVLEDM------------------ERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM 321

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
               L P+  TY+ LI+   R+GK   A  V      + L P   +Y  +I  YC++ R+
Sbjct: 322 RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRI 381

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+  L  M   G +P  + Y+ +L  +CK      A+ + E L   G   N +    +
Sbjct: 382 DKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTIL 441

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
                  G+  +A  ++  M   GI+PD ITY++LI+ +CR   + E   +L  M+ +  
Sbjct: 442 IDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGI 501

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P  + Y  +I  +CK   + E+++    ++ +G   N   +  L+      G   EA  
Sbjct: 502 LPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEH 561

Query: 496 LANALVSMHAISRD--TFKRL 514
               +  M+ IS D  +F R+
Sbjct: 562 FRQYMSRMN-ISFDSVSFNRI 581



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 178/379 (46%), Gaps = 3/379 (0%)

Query: 123 ELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +LA K+L  +  R G       Y + +  L    M   A  V   L       T I  ++
Sbjct: 85  KLALKILSSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSL 144

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           L   +  +       +LL +    K+  V  A   V  ++  G +   +S N +L  L+ 
Sbjct: 145 LRTISRFDPTNHVVFELLVK-AYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVE 203

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G+ +     + E ++R     V T +IL++SLC +G+   A D+L+  K   ++ ++ +
Sbjct: 204 EGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVT 262

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ ++  Y K GR   A+  L+ M  D    D+  YN ++   C+   + +A  + +++ 
Sbjct: 263 YNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                P+  +YNT+ +  +  G    A  + + ML + + P   TY ++I   CR+  +D
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           +A+ +L +M+ T   P+ ++Y+ ++ G+CK   +  +I ++  +  +G   N+T   +LI
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILI 442

Query: 482 EGIGYGGWRAEAMELANAL 500
           +G    G  ++A ++  ++
Sbjct: 443 DGFCQVGEISKAKQILKSM 461


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 214/452 (47%), Gaps = 42/452 (9%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK------------FFQERKSNK 90
           +I    ++   D S+Y+   MV  G  P       L+              FF E K   
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK--- 156

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
            ++V+         DV+++  +I G C+A +IE +  +L  LR  GFSP+VV Y  +I  
Sbjct: 157 -IKVV--------LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            C +G IE A  +F ++ +        TYT+LI                   G+ K G+ 
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIH------------------GLFKNGIK 249

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            Q F+    ++  G  P++ +YN ++  L   G+ ++  K+  EM  RG+  N+VTY+ L
Sbjct: 250 KQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LCR+ K  +A +V+   K  G+ P+  +Y+ LI  +C   +L  A+     + S G 
Sbjct: 310 IGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P +V YN +++ FCK G+   A ++ +++ + G  P+  +Y  +      S +  +A+ 
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + S M   G+ PD  TY+ LI   C  G ++EA  L   M   +F P  + YN ++LG+C
Sbjct: 430 LRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYC 489

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           K      ++ +   M EK   PN  +Y  +IE
Sbjct: 490 KEGSSYRALRLFREMEEKELPPNVASYRYMIE 521



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 158/299 (52%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G C+ G + ++F  +  L   G  P+V+ Y  L+      G+ E+ + L  EM   GL  
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  TY++LI  L ++G  +   ++    +E G+ P+ ++Y+ +++  CKDGR   A +  
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M   G   +IV YNT++   C+   A++A E+ +++   G  PN+ +YNT+       
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
               +AL +  ++ S+G+ P  +TYN L+S  C+ G    A  ++ +ME    +P+ ++Y
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            I+I  F ++  + ++I++ ++M E G  P+  TY +LI G    G   EA  L  ++V
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMV 470



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 18/321 (5%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRS 134
           T LI   F+     +   + E ++++G  P++  YN +++  CK  + + A KV D +R 
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           RG S ++VTYN +IG LC       A +V DQ+  D   P +ITY  LI       +  K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A+ L  ++                 G CKKG    A + V+ +E RG +P  ++Y +L+ 
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILID 416

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           T       E+  +L + M   GL P+V TYS+LI   C  G+  +A  + ++  EK   P
Sbjct: 417 TFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEP 476

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +   Y+ ++  YCK+G    A+     M      P++ +Y  ++   CK   + +A  + 
Sbjct: 477 NEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536

Query: 358 EKLSDVGCPPNVSSYNTMFSA 378
           EK+ D G  P+ S  N +  A
Sbjct: 537 EKMIDSGIGPSDSILNLISRA 557



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 4/275 (1%)

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV S+ ++++     G+ E+   L+ E+   G  PNVV Y+ LI   C+ G+ E A D+ 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
               + GL  + ++Y  LI    K+G      E  + M   G  P++  YN ++   CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A ++F+++ + G   N+ +YNT+   L        A  ++ +M S GI P+ ITY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI   C    + +A+ L  D++S    P++++YNI++ GFCK    + + +V+  M E
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +G KP++ TY +LI+       R++ ME A  L S
Sbjct: 402 RGIKPSKVTYTILIDTFA----RSDNMEKAIQLRS 432



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 54/294 (18%)

Query: 245 WEEGEKLMTEMISRGLEPNVVT--------------------YSILISSLCRDGKTEDAV 284
           +   + L+ ++IS  ++    T                    Y ++I++  +    + ++
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114

Query: 285 DVLRAAKEKGLTP----------------------------------DAYSYDPLISAYC 310
                  +KG  P                                  D YS+  +I   C
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCC 174

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G ++ + + L  +   G  P++V Y T++   CK G  ++A ++F ++   G   N  
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y  +   L+ +G K +   M  +M   G+ P+  TYN +++ LC+DG   +A  +  +M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                   +++YN +I G C+  + NE+ EV+  M   G  PN  TY  LI+G 
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 209/465 (44%), Gaps = 50/465 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ-ERKSNKAVRVMEILEKY 101
           L+K   R G FD++L     M+  G  PD V  + L+   F+ E     +    +IL + 
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                  +N +ISG CK  ++  A ++ D+++  G SPD +TY  +I   C    +  AF
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM----------------- 204
           KV   + R+   P++  Y  LI       +  +   LL EMG+                 
Sbjct: 563 KVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG----- 259
           CK+GM+ +AF     +   G   ++I  + ++  L  +G+ +E   LM +M+  G     
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 260 ---------------------------LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
                                      L PN + Y+I I+ LC+ GK +DA         
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           KG  PD ++Y  LI  Y   G +D A    D M+  G +P+IV YN ++   CK+ N D+
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F KL   G  PNV +YNT+       G+   A  +  +M+ +GI P  +TY++LI+
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            LC+ G ++ ++ LL  M        +I Y  ++ G  KT   NE
Sbjct: 863 GLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 224/490 (45%), Gaps = 54/490 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    + G+   + Y  + M+  G  PDV M + ++  F ++ K ++A   ++ +E  G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP++  Y++LI+G+     +E A  VL  +  +G S +VVTY ++I   C +  ++ A 
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 162 KVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
           KV   +  +    P    Y +LI      G+ D A++LLDEM                 G
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CK+G + +A   +  +     +PD  SYN LL      G   E   L  +M+  G+EP 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL------------------ 305
           V+TY+ L+  LCR G  +DA+ +     + G+ PD   Y  L                  
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 306 -----------------ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                            IS  CK G++  A E  D M   GC PD + Y T++  +CK  
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  QA ++   +      P++  YN++ S L+ S   +    +++EM  +G+ P+ +TY 
Sbjct: 557 NVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYG 616

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C++GM+D+A     +M        +I  + ++ G  +  RI+E+  ++  M + 
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 469 GCKPNETTYV 478
           G  P+   ++
Sbjct: 677 GFFPDHECFL 686



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 223/453 (49%), Gaps = 18/453 (3%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    T F  ++K     G    +LY  ++M   G  P +  C  L+    +  +++ A 
Sbjct: 152 FAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V + + + G  PDVF  + +++ FCK  +++ A   + ++ + G  P++VTY+ +I   
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            S G +E+A  V   +        V+TYT+LI+    + + D+A K+L       +GM  
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL-------RGMQE 324

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A             PD  +Y +L+      GK ++  +L+ EM+  GL+ N+   + LI
Sbjct: 325 EA----------ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G+  +A  V+    +  L PD+YSY+ L+  YC++G    A    D M+ +G  
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P ++ YNT+L   C+ G  D AL+I+  +   G  P+   Y+T+   L+   +   A  +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             ++L++G     IT+N++IS LC+ G + EA  +   M+     P  I+Y  +I G+CK
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              + ++ +V  AM  +   P+   Y  LI G+
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 211/450 (46%), Gaps = 61/450 (13%)

Query: 108 AYNALISGFCKANQIELANKVLDRL----RSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           AY   +   CK    +  N + D L    R   FSP V  +++++     +G+ ++A  V
Sbjct: 123 AYLNQLVDLCKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYV 178

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD + +    P++ +   L+   +  G+T  A  +  +M                   CK
Sbjct: 179 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 238

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G V +A  FV+ +E+ G +P++++Y+ L+   +++G  E  + ++  M  +G+  NVVT
Sbjct: 239 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 298

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           Y++LI   C+  K ++A  VLR  +E+  L PD  +Y  LI  YC+ G++D A+  LD M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G   ++   N+++  +CK G   +A  +  ++ D    P+  SYNT+       G  
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA----------------VG---- 425
             A  +  +ML +GIEP  +TYN+L+  LCR G  D+A                VG    
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTL 478

Query: 426 ---------------LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
                          L  D+ +  F  + I++N +I G CK  ++ E+ E+   M + GC
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            P+  TY  LI+G        +A ++  A+
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAM 568



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 19/203 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + GK D++  F   +   G  PD      LI  +      ++A R+  E+L +   P++ 
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+G CK+  ++ A ++  +L  +G  P+VVTYN +I   C  G +++AFK+ D++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           + +   P+V+TY+ LI                   G+CK G + ++ + +  +   G   
Sbjct: 846 IEEGISPSVVTYSALIN------------------GLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 228 DVISYNMLLRTLLNMGKWEEGEK 250
            +I Y  L++       + E  K
Sbjct: 888 KLIEYCTLVQGGFKTSNYNEMSK 910



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     AG  DE+    + M+  G  P++V    LI    +    ++A R+   L 
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  YN LI G+CK   ++ A K+ D++   G SP VVTY+ +I  LC  G IE
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQA 185
            + K+ +Q+++      +I Y  L+Q 
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQG 898


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 199/378 (52%), Gaps = 23/378 (6%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN LI GFC A+ ++ A  +L  +   G   +  T +I++  LC  G +  A + FD  L
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 169 R-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL-ESRGCQ 226
              + +P V++YT LI                   G+CK G V  AF   R +  + GC+
Sbjct: 88  ELAHAQPDVVSYTTLIN------------------GLCKLGRVDAAFDLFRKMVAAGGCR 129

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  +YN L+  L    + +    ++TE   R   P+VVTY+ L+++L + G+ ++A+  
Sbjct: 130 PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 189

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                E+G  P   S++ +I+  C+  RL  A+E  + MI     P++V Y+ ++   CK
Sbjct: 190 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +   D+A ++ +++   GC P++ +Y  +     ++G    ALG++  M+S+G  PD +T
Sbjct: 250 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 309

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y  +I  LC+ G VD+A  +  ++ + +  P V++Y+ +I G+C+  R++E  +V   M 
Sbjct: 310 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MR 366

Query: 467 EKGCKPNETTYVLLIEGI 484
           E  C+PN  TY  +I G+
Sbjct: 367 EMACRPNVVTYNTMIWGL 384



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 178/351 (50%), Gaps = 23/351 (6%)

Query: 49  RAGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPD 105
           R G+  ++L +F  S+     +PDVV  T LI    +  + + A  +   +   G   P+
Sbjct: 72  RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 131

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
            F YNAL+ G CK ++++ A  V+   R R F+PDVVTYN ++ +L   G ++ A   F 
Sbjct: 132 AFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 191

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           Q+  +   PT++++  +I       +   A+++ +EM                 G+CK  
Sbjct: 192 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 251

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A Q +  + S GC+PD+++Y  L+      G+ +    L+  M+S+G  P+VVTY+
Sbjct: 252 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 311

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           ++I  LC+ G+ +DA ++ R       +P+  +Y  LI  YC+  R+D   + +  M   
Sbjct: 312 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM--- 368

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            C P++V YNT++         ++A  +F ++S+ G  P+  +Y  +  AL
Sbjct: 369 ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 155/307 (50%), Gaps = 7/307 (2%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQ--PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           M + G   QA Q  R      CQ     ++YN+L+R   N    +    L+ EM   G++
Sbjct: 1   MVRAGSHNQALQLFRE---NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQ 57

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKE-KGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            N  T SI++  LCR G+   A++   A+ E     PD  SY  LI+  CK GR+D A +
Sbjct: 58  CNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFD 117

Query: 321 FLDYMI-SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
               M+ + GC P+   YN ++   CK    D A  +  +       P+V +YNT+ +AL
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
           +  G    AL   ++M  +G  P  +++N++I+ LCR   + +A+ +  +M    F P +
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y+++I G CK+ +++E+ ++L  M  +GC+P+   Y  L+ G    G    A+ L   
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 500 LVSMHAI 506
           +VS   I
Sbjct: 298 MVSQGCI 304



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 57/271 (21%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  L+   F+ G+ DE+L     M   G  P +V    +I    + R+   A+ V  E++
Sbjct: 170 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 229

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRG--------------FS------ 138
           ++   P++  Y+ +I G CK++Q++ A ++LDR+ S G              FS      
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289

Query: 139 ---------------PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
                          PDVVTY ++I  LC  G ++ A ++F +L+ + C P V+TY+ LI
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
                  + D+  K++ EM                      C+P+V++YN ++  L  + 
Sbjct: 350 GGYCRASRVDEGGKVMREM---------------------ACRPNVVTYNTMIWGLSMVD 388

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + EE   +  EM   G  P+  TY  L  +L
Sbjct: 389 RNEEAYGMFREMSECGFVPDARTYRGLKRAL 419


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 89/489 (18%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  ++L F+  M+ NGCKP ++  + +I  F  E    +A ++ E +++ G  P+V  Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS------------------- 150
           N L+SG+ KA  +  AN + + +R +G +PD  T+NI++                     
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 151 ----------------LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
                           LC  G ++ A +  + +L     P+V+ +  +I A    G  D 
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 195 AMKLLDEM-----------------GMCKKGMVGQA------------------------ 213
           A K    M                 G+ KKG + +A                        
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 214 -----------FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
                            +E+RG  PD I+++  +  L   G  EE  +  +EM  +G  P
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N   Y+ LI  LC  GK  +A+ + R  ++KGL PD ++ + +I+ +CK+GR+  A +  
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAF 686

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G  PD V YNT++  +CK  +   A E   K+   G  P++++YN       SS
Sbjct: 687 AEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSS 746

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
               RA+ M+ E+++ G+ P+ +TYN++++ +C D M+D A+ L   +    F P V++ 
Sbjct: 747 QKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTT 805

Query: 443 NIIILGFCK 451
           N+++  FCK
Sbjct: 806 NVLLSHFCK 814



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 187/377 (49%), Gaps = 22/377 (5%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+ DE++ F+E M+  G  P VV    +I  + +    + A +  +I+  +G  P    
Sbjct: 466 AGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSST 525

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
            ++++ G  K  +++ A  +L ++  +G   + V + +++      G    A  ++ ++ 
Sbjct: 526 CSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEME 585

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                P  I ++  I                   G+ K G+V +A++    +  +G  P+
Sbjct: 586 ARGICPDAIAFSAFID------------------GLSKAGLVEEAYEAFSEMSKKGFVPN 627

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              YN L+  L N GK  E  KL  EM  +GL P++ T +I+I+  C++G+ + A D   
Sbjct: 628 NFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                G+TPD  +Y+ LI  YCK   +  A EFL+ M + G  PDI  YN  +  FC + 
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQ 747

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI-RALGMISEMLSKGIEPDEITY 407
              +A+ + ++L  VG  PN  +YNTM +A+ +  D + RA+ + +++L     P+ +T 
Sbjct: 748 KISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT--DMLDRAMVLTAKLLKMAFVPNVVTT 805

Query: 408 NSLISCLCRDGMVDEAV 424
           N L+S  C+ GM ++A+
Sbjct: 806 NVLLSHFCKQGMPEKAL 822



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 146/291 (50%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G     M  ++ + +  +   G +P   + ++L R LL +G +    KL+  MI  G  P
Sbjct: 217 GFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRP 276

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
               ++I+I   C+ G    A  +L    +    PD Y+Y+ LI+AY   GR   A+ FL
Sbjct: 277 CNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFL 336

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             MI +GC P ++ ++TI+ AFC  GN  +A +IFE + +VG  PNV+ YNT+ S  + +
Sbjct: 337 HLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKA 396

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            D  +A  +  EM  KGI PD  T+N L++   + G   ++  L  D   +   P    Y
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLY 456

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++ + G C   +++E+++ L  M EKG  P+   +  +I      G+   A
Sbjct: 457 DVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNA 507



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/552 (22%), Positives = 222/552 (40%), Gaps = 94/552 (17%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQE 85
            H+L+ +  +     +I    R      S + +E M AN  K   D  +   L++ F   
Sbjct: 162 AHILAAESLQLLAQDVISWVIRRIGASRSAHLVEFMWANHHKYESDFSILNTLMRGFMNS 221

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
             + +++ ++  + + G  P   A + L     +        K+L  +   G  P    +
Sbjct: 222 EMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNF 281

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           NIMI   C +G +  A  +   + +  C+P V  Y ILI A  + G+T  A+        
Sbjct: 282 NIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALG------- 334

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK-------------- 250
                      F+  +   GC+P +I+++ ++    N G   E  K              
Sbjct: 335 -----------FLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383

Query: 251 ---------------------LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                                L  EM  +G+ P+  T++IL++   + GK  D+ ++ R 
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                L PD   YD  ++  C  G+LD A++FL+ M+  G  P +V +N+++AA+ + G 
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503

Query: 350 ADQALEIFE-----------------------------------KLSDVGCPPNVSSYNT 374
            D A + ++                                   K+ D G P N  ++  
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTV 563

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +    +  GD   A  +  EM ++GI PD I +++ I  L + G+V+EA     +M    
Sbjct: 564 LLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKG 623

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
           F P    YN +I G C   +++E++++   M +KG  P+  T  ++I G    G    A 
Sbjct: 624 FVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAF 683

Query: 495 ELANALVSMHAI 506
           +   A   MH I
Sbjct: 684 D---AFAEMHHI 692



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 218/474 (45%), Gaps = 40/474 (8%)

Query: 59  FIESMVANGCKPDVVMCTKLIKK--------FFQERKSNKAVRVMEILEKYGEPDVFAY- 109
           ++ S+ +N  +  VV  +KLIK+        F Q+      V++M++LE       FA+ 
Sbjct: 86  YLSSLNSNERRILVVELSKLIKQGKGYILKSFSQKFCPFFLVKIMKLLES--RQSAFAFF 143

Query: 110 --------NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM-IGSLCSRGMIE-- 158
                   +A +   C A  I LA + L  L     + DV+++ I  IG+  S  ++E  
Sbjct: 144 KLAFQNDSDATVHSCCIAAHI-LAAESLQLL-----AQDVISWVIRRIGASRSAHLVEFM 197

Query: 159 --------SAFKVFDQLLRDNCKPTVITYTILIQATMLE---GQTDKAMKLLDEMGMCKK 207
                   S F + + L+R      +   ++ I + M E     +  A+ +L  + + + 
Sbjct: 198 WANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRL-LLRV 256

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G  G  ++ +R +   G +P   ++N+++      G     E L+  M     EP+V  Y
Sbjct: 257 GDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAY 316

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +ILI++    G+T DA+  L    + G  P   ++  +I+A+C +G +  A +  + +  
Sbjct: 317 NILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQE 376

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  P++  YNT+++ + K  +  QA  ++E++ D G  P+ +++N + +  +  G +  
Sbjct: 377 VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEAD 436

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           +  +  +     + PD   Y+  ++ LC  G +DEA+  L DM      P+V+++N +I 
Sbjct: 437 SYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIA 496

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            + +    + + +    M   G  P+ +T   ++ G+   G   EA +L   ++
Sbjct: 497 AYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI 550


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 219/452 (48%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GK +E    ++     GC P VV    +I  + ++     A R ++ L+  G  P V  Y
Sbjct: 215 GKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETY 274

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+GFCKA + E  +++L  + +RG + +V  +N +I +    G++  A +   ++  
Sbjct: 275 GALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAE 334

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLD---EMGM--------------CKKGMVGQ 212
             C P + TY  +I  +   G+  +A + L+   E G+              CK+G   +
Sbjct: 335 MGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVK 394

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +   G +PD++SY   +  ++  G+ +    +  +M+ +G+ P+   Y++L+S
Sbjct: 395 AAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMS 454

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC++G+      +L    ++ + PD Y +  L+  + ++G LD AI+    +I  G  P
Sbjct: 455 GLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDP 514

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            IV YN ++  FCK G    AL    K+ +V   P+  +Y+T+        D   AL M 
Sbjct: 515 GIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMF 574

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+    +P+ ITY SLI+  C+   +  A  +   M+S    P V++Y  ++ GF K 
Sbjct: 575 GQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKA 634

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +  ++  +   M   GC PN+ T+  LI G+
Sbjct: 635 GKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 236/503 (46%), Gaps = 63/503 (12%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A TRP +  L   V  +  +KL+  SFR   F E    +E+M A   KP     + LI  
Sbjct: 80  ASTRPFSCSLD-GVAHSSLLKLLA-SFRV--FPEIELVLENMKAQHLKPTREAFSALILA 135

Query: 82  FFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRL----RSR 135
           + +    ++A+++   + +     P V A N+L++G  K+ ++++A ++ D++       
Sbjct: 136 YGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGT 195

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   D  T +I++  LC+ G IE   ++        C P V+ Y ++I            
Sbjct: 196 GAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIID----------- 244

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CKKG +  A + ++ L+ +G  P V +Y  L+      G++E  ++L+TEM
Sbjct: 245 -------GYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM 297

Query: 256 ISRGLE-----------------------------------PNVVTYSILISSLCRDGKT 280
            +RGL                                    P++ TY+ +I+  C+ G+ 
Sbjct: 298 AARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRI 357

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A + L  AKE+GL P+ +SY PL+ AYCK G    A   L  +   G  PD+V+Y   
Sbjct: 358 KEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAF 417

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +     +G  D AL + EK+ + G  P+   YN + S L  +G       ++SEML + +
Sbjct: 418 IHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNV 477

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           +PD   + +L+    R+G +DEA+ +   +      P ++ YN +I GFCK  ++ +++ 
Sbjct: 478 QPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALS 537

Query: 461 VLAAMFEKGCKPNETTYVLLIEG 483
            L  M      P+E TY  +I+G
Sbjct: 538 CLNKMKNVHHAPDEYTYSTVIDG 560



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 67/526 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AG+F+     +  M A G   +V +   +I   F+     KA   M  + + G
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+  YN +I+  CK  +I+ A++ L++ + RG  P+  +Y  ++ + C +G    A 
Sbjct: 337 CGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAA 396

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            +  ++     KP +++Y   I   ++ G+ D A+ + ++M                 G+
Sbjct: 397 GMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGL 456

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G        +  +  R  QPDV  +  L+   +  G+ +E  K+   +I +G++P +
Sbjct: 457 CKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGI 516

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y+ +I   C+ GK  DA+  L   K     PD Y+Y  +I  Y K   +  A++    
Sbjct: 517 VGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQ 576

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+     P+++ Y +++  FCK  +  +A ++F  +      PNV +Y T+    + +G 
Sbjct: 577 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGK 636

Query: 385 KIRALGMISEMLSKGIEPDEIT-------------------------------------- 406
             +A  +   ML  G  P++ T                                      
Sbjct: 637 PEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMM 696

Query: 407 -----------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
                      YNS+I CLC+ GMVD A  LL  M +  F    + +  ++ G C   + 
Sbjct: 697 LSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKS 756

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E   +++    K        Y L ++   Y G  +EA  +   L+
Sbjct: 757 KEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 32/321 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    R G+ DE++   + ++  G  P +V    +IK F +  K   A+  +  ++
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             +  PD + Y+ +I G+ K + +  A K+  ++    F P+V+TY  +I   C +  + 
Sbjct: 544 NVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 603

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--CK---------- 206
            A KVF  +   +  P V+TYT L+      G+ +KA  + + M M  C           
Sbjct: 604 RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663

Query: 207 KGMVGQA-------------------FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
            G+   A                     F   + S G    + +YN ++  L   G  + 
Sbjct: 664 NGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDT 723

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            + L+T+M+++G   + V ++ ++  LC  GK+++  +++     K     A  Y   + 
Sbjct: 724 AQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLD 783

Query: 308 AYCKDGRLDLAIEFLDYMISD 328
            Y   GRL  A   L  +I +
Sbjct: 784 KYLYQGRLSEASVILQTLIEE 804


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 251/550 (45%), Gaps = 89/550 (16%)

Query: 41  MKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           ++L   +F  AG   E+L  +  +  +G  P +   + L++  F+  +   A  V E + 
Sbjct: 151 LRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMT 210

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P +  +NA++ GFC    + +A+ +L  +   G +PDV +YNI+I   C  G   
Sbjct: 211 AEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSR 270

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            AFK+F+ + R  C+PTV+TY IL+     EG+  +A +L DEM                
Sbjct: 271 DAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLI 330

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG------------------ 243
            G  K G + QA    R +++RG  PD  ++N++       G                  
Sbjct: 331 DGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSA 390

Query: 244 --------------KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                         + ++  +L+   I +G+   V  ++ LI++  ++G  E+A ++ R 
Sbjct: 391 DGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRI 450

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAAFCKNG 348
             + GL P + +++ LI   C  GRLD A   L++M+S G CL    ++   L A+ ++G
Sbjct: 451 MNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS--TSFTICLDAYFRDG 508

Query: 349 NA-----------------------------------DQALEIFEKLSDVGCPPNVSSYN 373
           NA                                   ++A + F +++  G  PN  +YN
Sbjct: 509 NAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYN 568

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           ++ SAL  +G+   AL ++  M   G+ PD  T N LI  LCR+G +     LL+DM S 
Sbjct: 569 SIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSN 628

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P  ++YN II  +C+ + +N ++  +  M   GC+P+  TY + +  +       +A
Sbjct: 629 GLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQA 688

Query: 494 MELANALVSM 503
            +L + LV++
Sbjct: 689 GKLLDELVAV 698



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 196/385 (50%), Gaps = 29/385 (7%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
           F   M A+G   D+++C    +  +  R  +    ++  +E+     V  +NALI+ + K
Sbjct: 384 FSSHMSADGL--DMLVC----RLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSK 437

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVI 177
               E A+++   +   G +P   T+N +I  LC++G ++ A  + + ++ +  C  T  
Sbjct: 438 EGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-- 495

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSL 220
           ++TI + A   +G    A+K  D+MG                 +C+   V +A+Q    +
Sbjct: 496 SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEM 555

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            SRG  P+ I+YN ++  L   G   E  KL+  M   GL P++ T +ILI  LCR+GK 
Sbjct: 556 TSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKL 615

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           +   ++L      GLTPD  +Y+ +I+AYC+   ++ A+ F++ M+  GC PDI  YN  
Sbjct: 616 KMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIW 675

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI-RALGMISEMLSKG 399
           + + C+N   +QA ++ ++L  V C PN  +YNT+   + S  D + RA+ +   ++   
Sbjct: 676 MHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICS--DVLDRAMILTGRLIKMA 733

Query: 400 IEPDEITYNSLISCLCRDGMVDEAV 424
            +P+ IT N  +S  C+ G  + A+
Sbjct: 734 FKPNTITLNVFLSHFCKQGFGNRAL 758



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 215/464 (46%), Gaps = 30/464 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LIK     G   ++    E M  +GC+P VV    L+     E +  +A R+ + + + G
Sbjct: 259 LIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVG 318

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + +   +N LI G+ K+ Q++ A+     +++RG  PD  T+NI+             F
Sbjct: 319 IQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAAR-------AHKF 371

Query: 162 KVFDQLLRDN----CKPTVITYTILIQATMLEGQTDKAMKLL---DEMGM---------- 204
               QL+ D+       +     +L+     + + D A +LL    E G+          
Sbjct: 372 GYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNAL 431

Query: 205 ----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
                K+G+  +A +  R +   G  P   ++N L+  L N G+ +E + L+  M+S+G 
Sbjct: 432 IAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY 491

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
             +  +++I + +  RDG    A+         GL  D  ++   I+  C+   ++ A +
Sbjct: 492 CLST-SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQ 550

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M S G +P+ + YN+I++A CK GN  +AL++ + +   G  P++ + N +   L 
Sbjct: 551 AFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLC 610

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G       ++ +M S G+ PD +TYN++I+  CR   ++ A+  +  M      P + 
Sbjct: 611 REGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIF 670

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +YNI +   C+   +N++ ++L  +    C PN  TY  L++GI
Sbjct: 671 TYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGI 714



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 149/335 (44%), Gaps = 25/335 (7%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKS 88
           L      + F  LI      G+ DE+   +E MV+ G        +C   +  +F++  +
Sbjct: 454 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTIC---LDAYFRDGNA 510

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             A++  + +   G + D  A++A I+G C+ + +  A +    + SRG  P+ +TYN +
Sbjct: 511 VGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSI 570

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I +LC  G +  A K+   + +    P + T  ILI                   G+C++
Sbjct: 571 ISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILID------------------GLCRE 612

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +      +  + S G  PD ++YN ++               M +M+  G EP++ TY
Sbjct: 613 GKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTY 672

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +I + SLCR+     A  +L        +P++ +Y+ L+   C D  LD A+     +I 
Sbjct: 673 NIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSD-VLDRAMILTGRLIK 731

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
               P+ +  N  L+ FCK G  ++AL   EKL +
Sbjct: 732 MAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLRE 766


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 233/486 (47%), Gaps = 40/486 (8%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNK 90
           F      F  +I++    G+ D   Y ++ M   G  C  D+ +   +I  + Q   + +
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAER 129

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV +   ++++G +P V  YN ++      N+I++   V   ++  GF P+V TYN+++ 
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
           +LC    ++ A K+  ++    C P  ++YT +I +                  MC+ G+
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS------------------MCEVGL 231

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +  +     E     P V  YN L+  L     ++   +LM EM+ +G+ PNV++YS 
Sbjct: 232 VKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD- 328
           LI+ LC  G+ E A   L    ++G  P+ Y+   L+      G    A++  + MI   
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++V YNT++  FC +GN  +A+ +F  + ++GC PN+ +Y ++ +     G    A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + + ++ML+ G  P+ + Y +++  LCR     EA  L+  M      P+V ++N  I G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466

Query: 449 FCKTRRINESIEVLAAMFEKG-CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
            C   R++ + +V   M ++  C PN  TY  L++G+            AN +   + ++
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK----------ANRIEEAYGLT 516

Query: 508 RDTFKR 513
           R+ F R
Sbjct: 517 REIFMR 522



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 245/554 (44%), Gaps = 63/554 (11%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F   E  F+ +I    + G  + ++     +   GC P V +   ++     E +  
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
               V   +++ G EP+VF YN L+   CK N+++ A K+L  + ++G  PD V+Y  +I
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----- 203
            S+C  G+++   ++ ++      +P V  Y  LI     E     A +L+ EM      
Sbjct: 224 SSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278

Query: 204 ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       +C  G +  AF F+  +  RGC P++ + + L++     G   +   L
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338

Query: 252 MTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
             +MI   GL+PNVV Y+ L+   C  G    AV V    +E G +P+  +Y  LI+ + 
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN---ADQALEIFEK-------- 359
           K G LD A+   + M++ GC P++V Y  ++ A C++     A+  +EI  K        
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458

Query: 360 --------LSDVG-----------------CPPNVSSYNTMFSALWSSGDKIRALGMISE 394
                   L D G                 CPPN+ +YN +   L  +     A G+  E
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           +  +G+E    TYN+L+   C  G+   A+ L+  M      P  I+ N+IIL +CK  +
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578

Query: 455 INESIEV--LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI-SRDTF 511
              + ++  L +   +  +P+  +Y  +I G+     R + + L   ++S   + S  T+
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638

Query: 512 KRLNRTFPLLDVYK 525
             L   F L D+ +
Sbjct: 639 SVLINCFILDDIVR 652


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 232/484 (47%), Gaps = 19/484 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  ++    +  L+   F+AGK  E+L  +  M+  G   DV+ CT LI   F+  +  +
Sbjct: 53  MGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKE 112

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +   L +    P+   Y+ALI G CK   I  A   L  +  +   P+V+TY+ +I 
Sbjct: 113 AEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLIN 172

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
               +G++  AFKV  +++  N  P + TY IL+  +   G  D A+ L  +M       
Sbjct: 173 GYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 232

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      M + G + +A + V  + S G +PD+++Y  L+   L  GK      L 
Sbjct: 233 NVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLA 292

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM S+ +  ++VT+++LI+ L + GK+ D   +  A +E GL+PD  +Y+ +++   K 
Sbjct: 293 QEMTSKNVVFDIVTFNVLINCLFKLGKS-DTESIYSAMREMGLSPDLATYNTMLNGNFKK 351

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G    A+E  + M S   +P+ +  N ++   C+ G  + A++I +++  +G  P  ++Y
Sbjct: 352 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 411

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             + +    S      L     +++  ++ D+  YN LIS LC+ GM  +A  +L DME 
Sbjct: 412 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEE 471

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                   +YN +I G+C +  +  +    + M  +   P+  TY LL+ G+   G   E
Sbjct: 472 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 531

Query: 493 AMEL 496
           A +L
Sbjct: 532 ADDL 535



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 220/493 (44%), Gaps = 21/493 (4%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N + L+       +  LI    + G  + +   +  M    C P+V+  + LI  + ++ 
Sbjct: 119 NLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQG 178

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
             + A +V+ +++ K   P++  Y  L+ G  KA   ++A  +  +++  G   +V   +
Sbjct: 179 LLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILD 238

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
             + ++   G +E A ++  ++     KP ++ YT L+   +  G+   A+ L  EM   
Sbjct: 239 AFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM--T 296

Query: 206 KKGMVGQAFQF------------------VRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
            K +V     F                    ++   G  PD+ +YN +L      G W  
Sbjct: 297 SKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS 356

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EM SR L PN +T +I+I+ LC  G+ E+A+D+L+     GL P + +Y  L++
Sbjct: 357 ALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 416

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
              K  R D  ++  + +++     D   YN +++  CK G   +A  + + + + G   
Sbjct: 417 ISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIA 476

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           + ++YN +      S    RA    S MLS+ + PD  TYN L+  L + G++ EA  LL
Sbjct: 477 DTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLL 536

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +++     P   +Y  ++ G CK R   E + +   M  KG  P    Y +LI      
Sbjct: 537 SEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKM 596

Query: 488 GWRAEAMELANAL 500
           G   +A EL N +
Sbjct: 597 GKMKQAKELMNEM 609



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 203/437 (46%), Gaps = 20/437 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + GK  E    +  M   G   + V  T L+   F+  K  +A+  +  +   G   DV 
Sbjct: 36  KHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVI 95

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A   LI G  K+ QI+ A  +   L      P+ +TY+ +I   C  G I  A     ++
Sbjct: 96  ACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEM 155

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              +C P VITY+ LI                   G  K+G++  AF+ +R +  +   P
Sbjct: 156 EEKDCVPNVITYSSLIN------------------GYVKQGLLHDAFKVLRKMVHKNAMP 197

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++ +Y +LL      G  +    L ++M   GL+ NV      ++++ R G+ E+A +++
Sbjct: 198 NICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELV 257

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL PD  +Y  L+  + K G++  A+     M S   + DIV +N ++    K 
Sbjct: 258 AKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKL 317

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G +D    I+  + ++G  P++++YNTM +  +  G+   AL + +EM S+ + P+ IT 
Sbjct: 318 GKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITC 376

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I+ LC  G ++ A+ +L +M      PT  +Y I++    K+RR +  ++    +  
Sbjct: 377 NIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVN 436

Query: 468 KGCKPNETTYVLLIEGI 484
              K ++  Y +LI  +
Sbjct: 437 MQLKVDKDVYNILISNL 453



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 204/430 (47%), Gaps = 21/430 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV  + +++ G CK  ++     +L  +   G + + V+Y I++ +L   G +  A   
Sbjct: 22  PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 81

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              ++       VI  T+LI      GQ  +A  L   +                 G CK
Sbjct: 82  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCK 141

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A   +  +E + C P+VI+Y+ L+   +  G   +  K++ +M+ +   PN+ T
Sbjct: 142 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICT 201

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+IL+    + G  + A+D+    K+ GL  + +  D  ++   + GR++ A E +  M 
Sbjct: 202 YAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMA 261

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S G  PD+VNY  ++  F K+G    AL + ++++      ++ ++N + + L+  G K 
Sbjct: 262 SGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KS 320

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
               + S M   G+ PD  TYN++++   + G    A+ L  +M+S +  P  I+ NI+I
Sbjct: 321 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 380

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA-MELANALVSMH- 504
            G C+  R+  +I++L  M   G  P  TTY +L+  I     RA+  ++    LV+M  
Sbjct: 381 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN-ISSKSRRADTILQTHELLVNMQL 439

Query: 505 AISRDTFKRL 514
            + +D +  L
Sbjct: 440 KVDKDVYNIL 449



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 207/458 (45%), Gaps = 32/458 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           R+G+ +E+   +  M + G KPD+V  T L+  F +  K + A+ +  E+  K    D+ 
Sbjct: 246 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 305

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI+   K  + +    +   +R  G SPD+ TYN M+     +G   SA ++++++
Sbjct: 306 TFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEM 364

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  IT  I+I                   G+C+ G +  A   ++ +   G  P
Sbjct: 365 KSRKLIPNAITCNIMIN------------------GLCEAGRMENAIDILKEMVLMGLYP 406

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +LL       + +   +    +++  L+ +   Y+ILIS+LC+ G T  A  VL
Sbjct: 407 TSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVL 466

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  +E+G+  D  +Y+ LI  YC    L  A      M+S+   PDI  YN +L    K 
Sbjct: 467 KDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKA 526

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A ++  ++   G  PN  +Y T+        +    L +  EM+ KG  P    Y
Sbjct: 527 GLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAY 586

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK---------TRRIN-- 456
           N LI    + G + +A  L+ +M++    PT  +Y+I+I G+C          T +I+  
Sbjct: 587 NMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYR 646

Query: 457 -ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            E+  +   M ++G  P E+T   +       G +A+A
Sbjct: 647 AEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADA 684


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 209/459 (45%), Gaps = 53/459 (11%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
           T LI  +        A R +  L + G  PD  AY + + G+C+      A ++   +  
Sbjct: 78  TTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQ 137

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           RG +    TY  ++  LC  GM+  A  VF  +  D C P    Y+I++      G+  +
Sbjct: 138 RGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGE 197

Query: 195 AMKLL-DEMG----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A+ LL D MG                 C  G +  A    + ++S+GC P+V +Y  L+ 
Sbjct: 198 AVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLIC 257

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                GK E    L + MI  GL PNVVTY+ LI   C +G  E A  +L + +  GL P
Sbjct: 258 GFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAP 317

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           + ++   LI A CK GR++ A +FL  ++  G   + V Y +++ A CK+G  D A  + 
Sbjct: 318 NEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLM 377

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML--------------------- 396
           +K+   G  P+   Y+++   L      + A+ ++++M+                     
Sbjct: 378 QKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLRE 437

Query: 397 --------------SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                         + G++PD +TY   I   C+DG +++A  +++ M     RP + +Y
Sbjct: 438 FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           N +I G+     ++++   L  M + GCKPN+ +Y +L+
Sbjct: 498 NTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 237/503 (47%), Gaps = 34/503 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  L++    AG   E++     M  +GC PD  + + ++       ++ +AV ++ + +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+V  YNALI G+C    +ELA  +   ++S+G  P+V TY  +I   C  G +E
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  ++ +++     P V+TYT LIQ    EG  + A +LL  M                
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK G + +A QF+ SL  +G + + + Y  ++  L   GK++    LM ++I+ G  
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+   YS LI  LCR+ K  +A+ +L    E G+  +A  +  LI  + ++ R D     
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D M + G  PD+V Y   + ++C++G  + A  +  ++ D G  PN+++YNT+     +
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG----MVDEAVGL--LVDM----- 430
            G   +A   +  M+  G +P++ +Y  L+  L +      +V +++ L  +VDM     
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEE 566

Query: 431 ---ESTRFRPTVIS--YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
              E  + + +  S  Y+  I    K  R+ E+   L  M      P+E  Y  +IE   
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 486 YGGWRAEAMELANALVSMHAISR 508
                 EA+   +++V  + + R
Sbjct: 627 RMKLLKEALRFLDSMVKRNYLPR 649



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 175/378 (46%), Gaps = 18/378 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           ++  Y  LI+ +C A  +  A + L  L   G +PD   Y   +   C  G+   A ++F
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
             + +  C  T  TY  L+Q                  G+C  GMV +A      +   G
Sbjct: 133 LLMPQRGCARTPFTYAALLQ------------------GLCGAGMVREAMAVFAGMWPDG 174

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PD   Y++++  L   G+  E   L+T+ + +G  PNV  Y+ LI   C  G  E A+
Sbjct: 175 CAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAI 234

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           D+ +  + KG  P+  +Y  LI  +CK G+++ A+     MI  G  P++V Y T++   
Sbjct: 235 DIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQ 294

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C  G+ + A  +   +   G  PN  +   +  AL   G    A   +  ++ KGI+ ++
Sbjct: 295 CSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQ 354

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           + Y S+I  LC+ G  D A  L+  + +  F P    Y+ +I G C+  ++ E+I +L  
Sbjct: 355 VIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLND 414

Query: 465 MFEKGCKPNETTYVLLIE 482
           M E G + N   + +LI+
Sbjct: 415 MIESGVQANAVPFTILID 432



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 177/398 (44%), Gaps = 22/398 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +   N L+    +   +     +  R+  R    ++ TY  +I + C  G + +A + 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRH 96

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
              LLR    P    YT  +                  +G C+ G+   A +    +  R
Sbjct: 97  LSSLLRAGLAPDSHAYTSFV------------------LGYCRTGLFAHACRLFLLMPQR 138

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           GC     +Y  LL+ L   G   E   +   M   G  P+   YSI++  LC  G+  +A
Sbjct: 139 GCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEA 198

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           V +L  A  KG  P+   Y+ LI  YC  G L+LAI+    M S GCLP++  Y  ++  
Sbjct: 199 VALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICG 258

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           FCK+G  ++A+ ++ ++ + G  PNV +Y T+     S G    A  ++  M + G+ P+
Sbjct: 259 FCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPN 318

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           E T   LI  LC+ G ++EA   L  +     +   + Y  +I   CK+ + + +  ++ 
Sbjct: 319 EWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +  +G  P+   Y  LI+G+       EA+ L N ++
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 204/475 (42%), Gaps = 37/475 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + +LI    ++GK + ++     M+  G  P+VV  T LI+    E     A R++  +E
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+ +    LI   CK  +IE A + L  L  +G   + V Y  MI +LC  G  +
Sbjct: 312 ACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD 371

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  +++ +   P    Y+ LI                   G+C++  + +A   + 
Sbjct: 372 GAHNLMQKIITEGFVPDAHMYSSLID------------------GLCRENKLLEAISLLN 413

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +   G Q + + + +L+   L   + +  + +   M + G++P+VVTY++ I S C+DG
Sbjct: 414 DMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDG 473

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + EDA  ++    + G+ P+  +Y+ LI  Y   G +  A   L  MI +GC P+  +Y 
Sbjct: 474 RMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYT 533

Query: 339 TILAAFCKNGNADQAL----------------EIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            +L    K  +    +                E+ E++  + C      Y+     L S 
Sbjct: 534 VLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL-SK 592

Query: 383 GDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            D++  A   +  M S  + P E  Y  +I C  R  ++ EA+  L  M    + P + S
Sbjct: 593 VDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLES 652

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           Y  II   C+    + +  +   +  K    +E  + +LI+G+   G  A+   L
Sbjct: 653 YRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRL 707



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 170/426 (39%), Gaps = 70/426 (16%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V +  +  +I    ++GKFD +   ++ ++  G  PD  M + LI    +E K  +A+ +
Sbjct: 352 VNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISL 411

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + +++E   + +   +  LI    +  + +    + DR+ + G  PDVVTY + I S C 
Sbjct: 412 LNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQ 471

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G +E A  +  Q++    +P + TY  LI+                  G    G+V QA
Sbjct: 472 DGRMEDAESMMIQMIDHGVRPNLTTYNTLIK------------------GYANLGLVSQA 513

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE----------------GEKLMTEMIS 257
           F  ++++   GC+P+  SY +LL  LL    + +                 E+L+ E+I 
Sbjct: 514 FSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIK 573

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
                    Y   I  L +  + E+A   L   +   LTP    Y  +I    +   L  
Sbjct: 574 LQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKE 633

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A+ FLD M+    LP + +Y  I+ A C+ G+   A  IF                    
Sbjct: 634 ALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIF-------------------- 673

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
                           ++LSK    DEI +  LI  L + G   +   LL  ME    RP
Sbjct: 674 ---------------GDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRP 718

Query: 438 TVISYN 443
               Y+
Sbjct: 719 GSAIYS 724



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 12/351 (3%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P+ H+ S          LI    R  K  E++  +  M+ +G + + V  T LI K  +E
Sbjct: 387 PDAHMYS---------SLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLRE 437

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
            +S+    + + +   G +PDV  Y   I  +C+  ++E A  ++ ++   G  P++ TY
Sbjct: 438 FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           N +I    + G++  AF     ++ + CKP   +YT+L+   +L  +      + D + +
Sbjct: 498 NTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL--GLLLKKNSYHDLVADSISL 555

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            K   +    + +  +    C      Y+  +R L  + + EE +  +  M S  L P+ 
Sbjct: 556 WKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSE 615

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             Y+ +I    R    ++A+  L +  ++   P   SY  +I A C++G    A      
Sbjct: 616 DVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGD 675

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           ++S     D + +  ++    + GN      +   + +  C P  + Y+ +
Sbjct: 676 ILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 214/432 (49%), Gaps = 22/432 (5%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
            DE++    +M+ +   P +V  +KL+    + +  +  + +   +E  G   D++ YN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           +I+  C+ ++  +A  V+ ++   G+ PDVVT + +I   C    +  A  +  ++    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           CK  V+ Y  +I                   G CK G+V  A      +E  G + D ++
Sbjct: 170 CKLDVVIYNTIID------------------GFCKTGLVNNALVLFGRMERDGVRADTVT 211

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN L+  L   G+  +  +LM +M+ R + PNV+T++ LI++  R+GK  +A        
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
            + + PD ++Y+ +I   C  G++D A + LD M++ GC PD+V YNT++  FCK    D
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVD 331

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +  ++  ++S  G   +  ++NT+    + +G    A  + S M   G  P+  TY+ L+
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILL 388

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LC +  V++A+ L   M+ +     + +YNI+I G C    + ++ ++  ++  KG +
Sbjct: 389 YGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLE 448

Query: 472 PNETTYVLLIEG 483
           P+  TY  +I G
Sbjct: 449 PDVVTYTTMISG 460



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 22/436 (5%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
            +F KL+    ++  +D  +    +M   G   D+     +I    +  +   A+ V+  
Sbjct: 70  VEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGK 129

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           + K+G EPDV   ++LI+GFC+ N++  A  ++ ++       DVV YN +I   C  G+
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGL 189

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           + +A  +F ++ RD  +   +TY  L+                   G+C  G    A + 
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVT------------------GLCCSGRRSDAARL 231

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
           +R +  R   P+VI++  L+   +  GK+ E +K   EMI R ++P+V TY+ +I  LC 
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+ ++A  +L     KG  PD  +Y+ LI+ +CK  R+D   + +  M   G + D V 
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVT 351

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +NTI+  + + G  D A EIF ++   G  PN+ +Y+ +   L  +    +AL +   M 
Sbjct: 352 FNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQ 408

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              +E D  TYN +I  +C  G V++A  L   +      P V++Y  +I GFC+ R  +
Sbjct: 409 KSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWD 468

Query: 457 ESIEVLAAMFEKGCKP 472
           ++  +   M E G  P
Sbjct: 469 KADFLYRKMQEDGLLP 484



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 21/397 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  ++ L+S   K+   +L   +   +   G   D+ TYNI+I  LC       A  V
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++++   +P V+T + LI                   G C+   V  A   V  +E  
Sbjct: 127 VGKMMKFGYEPDVVTVSSLIN------------------GFCQGNRVFGAVDLVSKMEEM 168

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            C+ DV+ YN ++      G       L   M   G+  + VTY+ L++ LC  G+  DA
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             ++R    + + P+  ++  LI+A+ ++G+   A +F + MI     PD+  YN+++  
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +G  D+A +I + +   GC P+V +YNT+ +    +        ++ EM  +G+  D
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +T+N++I    + G  D A  +   M S   RP + +Y+I++ G C   R+ +++ +  
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFE 405

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +M +   + + TTY ++I G+   G   +A +L  +L
Sbjct: 406 SMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSL 442



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 174/379 (45%), Gaps = 33/379 (8%)

Query: 122 IELANKV----LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           +E  N+V    + R   R F+   ++ N+           + A  +F  +++    P+++
Sbjct: 22  LEKGNRVTAPFISRFWGRAFTTKRLSMNL-----------DEAIDLFCNMIQSRPLPSIV 70

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            ++ L+         D  + L   M +C                  G   D+ +YN+++ 
Sbjct: 71  EFSKLLSNIAKSKNYDLVISLFHNMEIC------------------GIGHDLYTYNIVIN 112

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L    ++     ++ +M+  G EP+VVT S LI+  C+  +   AVD++   +E     
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL 172

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D   Y+ +I  +CK G ++ A+     M  DG   D V YN+++   C +G    A  + 
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLM 232

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             +      PNV ++  + +A    G  + A     EM+ + I+PD  TYNS+I  LC  
Sbjct: 233 RDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMH 292

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G VDEA  +L  M +    P V++YN +I GFCKT+R++E  +++  M ++G   +  T+
Sbjct: 293 GQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352

Query: 478 VLLIEGIGYGGWRAEAMEL 496
             +I+G    G    A E+
Sbjct: 353 NTIIQGYFQAGRPDAAQEI 371



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N D+A+++F  +      P++  ++ + S +  S +    + +   M   GI  D  TYN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I+CLCR      A+ ++  M    + P V++ + +I GFC+  R+  ++++++ M E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            CK +   Y  +I+G    G       + NALV    + RD
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGL------VNNALVLFGRMERD 203



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 64/151 (42%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L + EK + V  P     +   F+    S +   A+ +   M+     P  + ++ L+S 
Sbjct: 19  LCLLEKGNRVTAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSN 78

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           + +    D  + L  +ME       + +YNI+I   C+  R   ++ V+  M + G +P+
Sbjct: 79  IAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
             T   LI G   G     A++L + +  M 
Sbjct: 139 VVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 218/452 (48%), Gaps = 20/452 (4%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDVFAYN 110
           FD+++     M+     P +V   KL+    + +     V +   L+  G  +P +   +
Sbjct: 36  FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLS 95

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I+      Q+ LA  V+ ++  RGF  D  T   ++  LC +G    A  ++D  +  
Sbjct: 96  IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
                 + Y  LI      G+T  A++LL +M                 G+CK+G+V +A
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTYSILIS 272
                 +  +G   DV +YN L+      G+++   +L+ EM+ +  + P+V T++IL+ 
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           +LC+ G   +A +V     ++GL PD  S + L++ +C  G +  A E  D M+  G LP
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP 335

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++++Y+T++  +CK    D+AL +  ++      P+  +YN +   L  SG  +    ++
Sbjct: 336 NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLV 395

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             M + G  PD ITYN L+    +   +D+A+ L   +  T   P + +YNI+I G CK 
Sbjct: 396 EAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKG 455

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            R+  + E+   +  KGC+PN  TY ++I G+
Sbjct: 456 GRMKAAKEIFQLLSVKGCRPNIRTYNIMINGL 487



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 216/437 (49%), Gaps = 37/437 (8%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFD---------------ESLYFIESMVANGCKPDV 72
           THL    +  +   K++KR F    F                E+L   +  V+ G   D 
Sbjct: 102 THLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDE 161

Query: 73  VMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDR 131
           V    LI    +  K+  A+ ++  +EK G  P++  YN ++ G CK   +  A  +   
Sbjct: 162 VCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE 221

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL-LRDNCKPTVITYTILIQATMLEG 190
           +  +G   DV TYN +I   C  G  + A ++ +++ ++++ +P V T+ IL+ A     
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDA----- 276

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                        +CK GMV +A      +  RG +PDV+S N L+      G   E ++
Sbjct: 277 -------------LCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKE 323

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           +   M+ RG  PNV++YS LI+  C+    ++A+ +L    ++ L PD  +Y+ L+    
Sbjct: 324 VFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLS 383

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K GR+    + ++ M + G  PD++ YN +L  + K    D+AL +F+ + D G  PN+ 
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLS-KGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
           +YN +   L   G +++A   I ++LS KG  P+  TYN +I+ L R+G++DEA  LL++
Sbjct: 444 TYNILIDGLCKGG-RMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLE 502

Query: 430 MESTRFRPTVISYNIII 446
           M    F P  ++++ ++
Sbjct: 503 MVDDGFPPNAVTFDPLV 519



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 26/410 (6%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C+  ++ E + +   A ++       F   E  +  LI    + GK  +++  +  M   
Sbjct: 137 CLKGRTFEALNLYDHAVSK------GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG 190

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELA 125
           G +P+++M   ++    +E    +A  +  E++ K    DVF YN+LI GFC A Q + A
Sbjct: 191 GVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGA 250

Query: 126 NKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
            ++L+ +  +    PDV T+NI++ +LC  GM+  A  VF  +++   +P V++   L+ 
Sbjct: 251 VRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMN 310

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G C +G + +A +    +  RG  P+VISY+ L+     +  
Sbjct: 311 ------------------GWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            +E  +L+TEM  R L P+ VTY+ L+  L + G+     D++ A +  G  PD  +Y+ 
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+  Y K   LD A+    +++  G  P+I  YN ++   CK G    A EIF+ LS  G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           C PN+ +YN M + L   G    A  ++ EM+  G  P+ +T++ L+  L
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 1/232 (0%)

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNYNT 339
           +DAV            P   S + L+S+  K       +    ++ S G   P +V  + 
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
            + +    G    A  +  K+   G   +  +  T+   L   G    AL +    +SKG
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
              DE+ Y +LI+ LC+ G   +A+ LL  ME    RP +I YN+++ G CK   + E+ 
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEAC 216

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            + + M  KG   +  TY  LI G    G    A+ L N +V    +  D +
Sbjct: 217 GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++G+       +E+M A+G  PD++    L+  + +    +KA+ + + +   G  P++ 
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI G CK  +++ A ++   L  +G  P++ TYNIMI  L   G+++ A  +  ++
Sbjct: 444 TYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEM 503

Query: 168 LRDNCKPTVITYTILIQATM 187
           + D   P  +T+  L++A +
Sbjct: 504 VDDGFPPNAVTFDPLVRALL 523



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 37/202 (18%)

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS----------------------- 382
           K    D A+  F ++  +  PP++ S N + S++  +                       
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 383 -------------GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
                        G    A  ++++++ +G   D  T  +L+  LC  G   EA+ L   
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
             S  F    + Y  +I G CK  +  ++IE+L  M + G +PN   Y ++++G+   G 
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 490 RAEAMELANALVSMHAISRDTF 511
             EA  L + +V    I  D F
Sbjct: 212 VTEACGLCSEMVG-KGICIDVF 232


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 233/464 (50%), Gaps = 22/464 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI+   + G+ +++L F + M   G  P V     +I+ + + +K  +A+++ +   
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN-IMIGSLCSRGMIE 158
           + G  +VF  N ++S  CK  + + A ++L ++ SRG  P+VV+YN +M+G  C +  ++
Sbjct: 437 ETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGH-CRQKNMD 495

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  VF  +L    KP   TY+ILI           A+++++ M                
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555

Query: 203 -GMCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            G+CK G   +A + + ++  E R C    +SYN ++      G+ +       EM   G
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNV+TY+ L++ LC++ + + A+++    K KG+  D  +Y  LI  +CK   ++ A 
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
                ++ +G  P    YN++++ F   GN   AL++++K+   G   ++ +Y T+   L
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+ I A  + +EM + G+ PDEI Y  +++ L + G   + V +  +M+     P V
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + YN +I G  +   ++E+  +   M +KG  P+  T+ +L+ G
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 214/447 (47%), Gaps = 18/447 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELAN 126
           C P     T +I    ++   + A+R+  E+L      +V A  +LI+G CK N +  A 
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            + D++   G SP+ VT++++I      G +E A + + ++      P+V     +IQ  
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419

Query: 187 MLEGQTDKAMKLLDE----------------MGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
           +   + ++A+KL DE                  +CK+G   +A + +  +ESRG  P+V+
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SYN ++         +    + + ++ +GL+PN  TYSILI    R+   ++A++V+   
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNYNTILAAFCKNGN 349
               +  +   Y  +I+  CK G+   A E L  MI +  L    ++YN+I+  F K G 
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A+  +E++   G  PNV +Y ++ + L  +    +AL M  EM +KG++ D   Y +
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI   C+   ++ A  L  ++      P+   YN +I GF     +  ++++   M + G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + +  TY  LI+G+   G    A EL
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASEL 746



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 230/532 (43%), Gaps = 70/532 (13%)

Query: 28  THLLSFDVKETQFMKLIKRSFRA----GKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
             +L  DV    F   + R+  A        E+      MVA G   D V    L++   
Sbjct: 187 NQMLELDV--IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244

Query: 84  QERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDV 141
           +E K  +A+ V+   +E+  EPD   Y+  +   CK   + +AN +L  ++ +    P  
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            TY  +I +   +G ++ A ++ D++L D     V+  T LI           A+ L D+
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                    K G + +A +F + +E  G  P V   + +++  L   K
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            EE  KL  E    GL  NV   + ++S LC+ GKT++A ++L   + +G+ P+  SY+ 
Sbjct: 425 HEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483

Query: 305 LISAYCKDGRLDL-----------------------------------AIEFLDYMISDG 329
           ++  +C+   +DL                                   A+E +++M S  
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIF-----EKLSDVGCPPNVSSYNTMFSALWSSGD 384
              + V Y TI+   CK G   +A E+      EK   V C     SYN++    +  G+
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC----MSYNSIIDGFFKEGE 599

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A+    EM   GI P+ ITY SL++ LC++  +D+A+ +  +M++   +  + +Y  
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           +I GFCK   +  +  + + + E+G  P++  Y  LI G    G    A++L
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 196/397 (49%), Gaps = 22/397 (5%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A+N L++ + K  Q + A  +++++      P     N  + +L  R  +  A +++ ++
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           +        +T  +L++A++ E +  +A+++L                  R++E RG +P
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLS-----------------RAIE-RGAEP 266

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSILISSLCRDGKTEDAVDV 286
           D + Y++ ++             L+ EM  + L  P+  TY+ +I +  + G  +DA+ +
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G++ +  +   LI+ +CK+  L  A+   D M  +G  P+ V ++ ++  F K
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEMLSKGIEPDEI 405
           NG  ++ALE ++K+  +G  P+V   +T+    W  G K   AL +  E    G+  +  
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG-WLKGQKHEEALKLFDESFETGL-ANVF 444

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
             N+++S LC+ G  DEA  LL  MES    P V+SYN ++LG C+ + ++ +  V + +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            EKG KPN  TY +LI+G         A+E+ N + S
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 173/407 (42%), Gaps = 31/407 (7%)

Query: 7   CINPKSNERVRVSSSAETR---PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESM 63
           C   K++E   + S  E+R   PN            +  ++    R    D +     ++
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNV---------VSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 64  VANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQI 122
           +  G KP+    + LI   F+      A+ V+  +     E +   Y  +I+G CK  Q 
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564

Query: 123 ELANKVL-DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
             A ++L + +  +      ++YN +I      G ++SA   ++++  +   P VITYT 
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           L+       + D+A+++ DEM                 G CK+  +  A      L   G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P    YN L+    N+G       L  +M+  GL  ++ TY+ LI  L +DG    A 
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++    +  GL PD   Y  +++   K G+    ++  + M  +   P+++ YN ++A  
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            + GN D+A  + +++ D G  P+ ++++ + S    +   +RA  +
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           KL+    S G E N   ++ L+++  +D +T+ AVD++    E  + P     +  +SA 
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            +   L  A E    M++ G   D V    ++ A  +     +ALE+  +  + G  P+ 
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCLCRDGMVDEAVGLLV 428
             Y+    A   + D   A  ++ EM  K +  P + TY S+I    + G +D+A+ L  
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M S      V++   +I G CK   +  ++ +   M ++G  PN  T+ +LIE     G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 489 WRAEAMEL 496
              +A+E 
Sbjct: 389 EMEKALEF 396



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 126/283 (44%), Gaps = 1/283 (0%)

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           + V S +S G + +  ++N LL       + +    ++ +M+   + P     +  +S+L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            +     +A ++       G+  D  +   L+ A  ++ +   A+E L   I  G  PD 
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           + Y+  + A CK  +   A  +  ++ +   C P+  +Y ++  A    G+   A+ +  
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EMLS GI  + +   SLI+  C++  +  A+ L   ME     P  ++++++I  F K  
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + +++E    M   G  P+      +I+G   G    EA++L
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 227/454 (50%), Gaps = 27/454 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           R  +  +++ F+         P VV    L+  F +    + A     ++ KYG  PDV+
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN L+ G C A  +E A +  + + + G  PD+VTYNI+       G+I  A+KV  ++
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L +   P ++TYTILI                   G C+ G + ++F+    + S+G + 
Sbjct: 367 LLNGLNPDLVTYTILI------------------CGHCQMGNIEESFKLKEKMLSQGLKL 408

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            +++Y +LL +L   G+ +E   L+ EM   GL+P+++TYS         G  E+A+++ 
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELY 460

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                K + P+++    +IS   + G +  A  + D +       +I+ YN ++  + K 
Sbjct: 461 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 520

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           GN  +A+  ++++ + G  P + ++N++       G    A+ ++  +   G+ P  +TY
Sbjct: 521 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 580

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L++  C +G +     +L +ME+   +PT I+Y +++ G CK  R++ES+++L  M+ 
Sbjct: 581 TTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYA 640

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +G  P++ TY  +I+         +A +L N ++
Sbjct: 641 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 674



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 230/499 (46%), Gaps = 54/499 (10%)

Query: 16  VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
           +R +   E  P+  ++SF+   + F K+       G  D +  F   M+  G  PDV   
Sbjct: 258 LRETGGEEFGPS--VVSFNALMSGFCKM-------GSVDVAKSFFCMMIKYGLLPDVYSY 308

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
             L+          +A+     +E +G EPD+  YN L +GF     I  A KV+ R+  
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G +PD+VTY I+I   C  G IE +FK+ +++L    K +++TYT+L+ +    G+ D+
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428

Query: 195 AMKLLDEM--------------------------------------------GMCKKGMV 210
           A+ LL EM                                            G+ +KG +
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAI 488

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A  +  S+       ++I YN+++     +G   E  +   ++I +G+ P +VT++ L
Sbjct: 489 SEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSL 548

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+ GK  +AV +L   K  GL P + +Y  L++ YC++G +    + L  M +   
Sbjct: 549 IYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 608

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P  + Y  ++   CK G   +++++ + +   G  P+  +YNT+  +   + D  +A  
Sbjct: 609 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           + ++ML   ++P  +TYN LI+ LC  G + +A  LLV ++    R T ++Y  II   C
Sbjct: 669 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 728

Query: 451 KTRRINESIEVLAAMFEKG 469
               +  ++     M E+G
Sbjct: 729 AKGDVQNALVFFHQMVERG 747



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 211/484 (43%), Gaps = 45/484 (9%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG  +E+L F   M  +G +PD+V    L   F      + A +V++ +   G  PD+  
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---------------- 152
           Y  LI G C+   IE + K+ +++ S+G    +VTY +++ SLC                
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 153 -----------SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
                      SRG +E A ++++++      P     + +I     +G   +A    D 
Sbjct: 438 VIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 497

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           +                 G  K G +G+A +  + +  +G  P ++++N L+      GK
Sbjct: 498 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 557

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
             E  KL+  +   GL P  VTY+ L++  C +G      D+L   + K + P   +Y  
Sbjct: 558 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 617

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           ++   CK+GRL  +++ L YM + G  PD + YNT++ +FCK  +  +A ++  ++    
Sbjct: 618 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 677

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
             P+  +YN + + L   G+   A  ++  +  + I   ++ Y ++I   C  G V  A+
Sbjct: 678 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 737

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                M    F  ++  Y+ +I   CK   I ++      M   G  P++   ++++   
Sbjct: 738 VFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 797

Query: 485 GYGG 488
              G
Sbjct: 798 HRSG 801



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 19/361 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
           +I   F  G   E+  + +S+  +    ++++   +I  + +     +AVR   +I+EK 
Sbjct: 478 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 537

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P +  +N+LI GFCK  ++  A K+LD ++  G  P  VTY  ++   C  G + S F
Sbjct: 538 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 597

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +  ++     KPT ITYT++++                  G+CK+G + ++ Q ++ + 
Sbjct: 598 DMLHEMEAKAIKPTQITYTVVVK------------------GLCKEGRLHESVQLLKYMY 639

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           +RG  PD I+YN ++++       ++  +L  +M+   L+P+ VTY++LI+ LC  G  +
Sbjct: 640 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 699

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA  +L   +++ +     +Y  +I A+C  G +  A+ F   M+  G    I +Y+ ++
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK      A   F  +   G PP+      M +A   SGD      + + M+  G+ 
Sbjct: 760 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 819

Query: 402 P 402
           P
Sbjct: 820 P 820



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 6/352 (1%)

Query: 128 VLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           + D LR+  GF    V++ I+   +  +G  +   +V +Q++ +    +  +   L+  +
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG-KW 245
             +   +  +  +      +  MV  A   +  ++    Q  + +YN LL  L +    W
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW 220

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +    +  E+ + G+  N  T  ILI  LCR  + +DAV  LR    +   P   S++ L
Sbjct: 221 D----VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +S +CK G +D+A  F   MI  G LPD+ +YN +L   C  G+ ++ALE    + + G 
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P++ +YN + +     G    A  ++  ML  G+ PD +TY  LI   C+ G ++E+  
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           L   M S   + ++++Y +++   CK+ RI+E++ +L  M   G KP+  TY
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 231/536 (43%), Gaps = 78/536 (14%)

Query: 3   TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
           T+ S +N    +++ +S   +   ++ L  FD+   ++       FR  +   S + +  
Sbjct: 73  TLASVLNTHQVDQILLSLRVDN-SDSALFLFDLLRNEY------GFRHSRV--SWFIVSH 123

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDV--FAYNALISGFCKA 119
           +VA   K       +++ +  +E  S  A  + E+L   + + D+    ++ L   + +A
Sbjct: 124 VVAR--KGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRA 181

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
             +  A  VL +++       + TYN ++ +L    ++   + V++++          T 
Sbjct: 182 EMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM---WDVYNEIKASGVPQNEYTN 238

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            ILI                   G+C++  +  A  F+R        P V+S+N L+   
Sbjct: 239 PILID------------------GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
             MG  +  +     MI  GL P+V +Y+IL+  LC  G  E+A++     +  G+ PD 
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ L + +   G +  A + +  M+ +G  PD+V Y  ++   C+ GN +++ ++ EK
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   G   ++ +Y  + S+L  SG    A+ ++ EM   G++PD +TY+         G 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GA 452

Query: 420 VDEAVGLLVDMESTRFRPT-----------------------------------VISYNI 444
           V+EA+ L  +M S R  P                                    +I YNI
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 512

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +I G+ K   I E++     + EKG  P   T+  LI G    G  AEA++L + +
Sbjct: 513 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 9/273 (3%)

Query: 236 LRTLLNMGKWEEGE---KLMTEMIS---RGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           LR +LN    EEG      + E++    R  + N V + +L  +  R     DA+ VL  
Sbjct: 134 LRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAK 193

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K   L     +Y+ L+         D+  +  + + + G   +      ++   C+   
Sbjct: 194 MKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSR 250

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A+    +       P+V S+N + S     G    A      M+  G+ PD  +YN 
Sbjct: 251 LQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNI 310

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+  LC  G ++EA+    DME+    P +++YNI+  GF     I+ + +V+  M   G
Sbjct: 311 LLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNG 370

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             P+  TY +LI G    G   E+ +L   ++S
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 228/494 (46%), Gaps = 29/494 (5%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLI 79
           +A  RP+T           + K ++    AG  DE++  +  M  +G   P+      +I
Sbjct: 145 AARARPDTF---------TWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVI 195

Query: 80  KKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
              ++      AV++  E+ EK   P+   YN +I G  K   +E   ++  ++   G  
Sbjct: 196 AGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLK 255

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P+V+TYN+++  LC  G +     V D++      P   TY+IL       G +   + L
Sbjct: 256 PNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSL 315

Query: 199 LDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            +E                  G+CK G + +A + +++L + G     + YN L+     
Sbjct: 316 FEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQ 375

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           +G  E    +  +M SR + P+ +TY+ LI+ L +  +  +A D++   ++ G+ P   +
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           ++ LI AY + G+L+     L  M   G  P++V+Y +I+ AFCKNG   +A+ I + + 
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
                P    YN +  A    G   +A  +  +M S G+ P  +TYN LI  LC+   + 
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  LL  + +    P VISYN +I   C     + ++E+   M++ G KP+  TY +L 
Sbjct: 556 EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLF 615

Query: 482 EGIGYGGWRAEAME 495
             +G G  R   ME
Sbjct: 616 SSLG-GAGRVHEME 628



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 226/475 (47%), Gaps = 25/475 (5%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           P  +  S++V       +I   ++AG   +++   + M      P+ +    +I    ++
Sbjct: 184 PAPNAFSYNV-------VIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKK 236

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
                  R+   + ++G +P+V  YN L+SG C+A ++     VLD + SR   PD  TY
Sbjct: 237 GDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY 296

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
           +I+       G  ++   +F++ ++   K    T +IL+     +G+  KA ++L  +  
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVN 356

Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G C+ G +  AF   + ++SR  +PD I+YN L+  L  + +  E
Sbjct: 357 SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
              L+ EM   G+ P+V T++ LI +  R G+ E    +L   +EKGL P+  SY  +++
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A+CK+G++  A+  LD M     LP    YN I+ A+ + G+ DQA  + EK+   G PP
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           ++ +YN +   L        A  ++  + + G+ PD I+YN+LIS  C     D A+ L 
Sbjct: 537 SIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELE 596

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            +M     +P+  +Y ++        R++E   +   M +K   P    Y ++++
Sbjct: 597 KEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVD 651



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 215/442 (48%), Gaps = 20/442 (4%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP--DVFAYNALISGFCK 118
           E +VA   +PD     K ++        ++AV ++  +   G P  + F+YN +I+G  K
Sbjct: 141 ELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWK 200

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           A     A K+ D +  +   P+ +TYN MI     +G +ES F+++ Q+LR   KP VIT
Sbjct: 201 AGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVIT 260

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           Y +L+                   G+C+ G +G+    +  + SR   PD  +Y++L   
Sbjct: 261 YNVLLS------------------GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDG 302

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
               G  +    L  E + +G++    T SIL++ LC+DGK   A +VL+     GL   
Sbjct: 303 HSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQT 362

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
              Y+ LI+ YC+ G L+ A      M S    PD + YN ++    K     +A ++  
Sbjct: 363 TVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVI 422

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++   G  P+V ++NT+  A   +G   +   ++S+M  KG++P+ ++Y S+++  C++G
Sbjct: 423 EMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNG 482

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            + EAV +L DM      P    YN II  + +    +++  +   M   G  P+  TY 
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542

Query: 479 LLIEGIGYGGWRAEAMELANAL 500
           LLI+G+      +EA EL ++L
Sbjct: 543 LLIKGLCKQSQISEAEELLDSL 564



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 193/400 (48%), Gaps = 19/400 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFK 162
           PD F +N  +     A  ++ A  +L R+   G  +P+  +YN++I  L   G    A K
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +FD++      P  ITY      TM++G               KKG +   F+    +  
Sbjct: 210 LFDEMPEKAVVPNHITYN-----TMIDGHI-------------KKGDLESGFRLWSQMLR 251

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            G +P+VI+YN+LL  L   G+  E   ++ EM SR + P+  TYSIL     R G ++ 
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQT 311

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
            + +   + +KG+   AY+   L++  CKDG++  A E L  +++ G L   V YNT++ 
Sbjct: 312 MLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLIN 371

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +C+ G+ + A  IF+++      P+  +YN + + L        A  ++ EM   G+ P
Sbjct: 372 GYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNP 431

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
              T+N+LI    R G +++   +L DM+    +P V+SY  I+  FCK  +I E++ +L
Sbjct: 432 SVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAIL 491

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             MF K   P    Y  +I+     G   +A  LA  + S
Sbjct: 492 DDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 194/429 (45%), Gaps = 19/429 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+  E+   ++ M +    PD    + L     +   S   + + E   K G +   +
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             + L++G CK  +I  A +VL  L + G     V YN +I   C  G +E AF +F Q+
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                +P  ITY  LI                   G+ K   + +A   V  +E  G  P
Sbjct: 390 KSRLIRPDHITYNALIN------------------GLGKVERITEAHDLVIEMEKNGVNP 431

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V ++N L+      G+ E+   ++++M  +GL+PNVV+Y  ++++ C++GK  +AV +L
Sbjct: 432 SVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAIL 491

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                K + P A  Y+ +I AY + G  D A    + M S G  P IV YN ++   CK 
Sbjct: 492 DDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQ 551

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               +A E+ + L + G  P+V SYNT+ SA     +  RAL +  EM   GI+P   TY
Sbjct: 552 SQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTY 611

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
             L S L   G V E   L   M      P    YNI++  + K    ++   +   M +
Sbjct: 612 RMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSD 671

Query: 468 KGCKPNETT 476
           KG    + T
Sbjct: 672 KGIAVGDYT 680



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 21/264 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    RAG+ ++    +  M   G KP+VV    ++  F +  K  +AV ++ ++ 
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P    YNA+I  + +    + A  + ++++S G  P +VTYN++I  LC +  I 
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++ D L      P VI+Y  LI A      TD+A++L  EM  C             
Sbjct: 556 EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC------------- 602

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                G +P   +Y ML  +L   G+  E E L  +M+ + + P    Y+I++ +  + G
Sbjct: 603 -----GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCG 657

Query: 279 KTEDAVDVLRAA-KEKGLTPDAYS 301
           + E  V+ LR    +KG+    Y+
Sbjct: 658 E-ESKVEALRKEMSDKGIAVGDYT 680



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISCLC 415
           FE L      P+  ++N    A   +GD   A+GM+  M   G   P+  +YN +I+ L 
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G   +AV L  +M      P  I+YN +I G  K   +     + + M   G KPN  
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS--------MHAISRDTFKRLNRTFPLLDVYKE 526
           TY +L+ G+   G   E   + + + S         ++I  D   R   +  +L +++E
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEE 318


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 236/513 (46%), Gaps = 53/513 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LI    +AG+  E L  +  MV+ G   D+V  T L+    ++ K+++    + 
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368

Query: 97  I-LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             L      +   Y  LI   CKA+ ++ A +VL  +  +  SP+VVT++ +I     RG
Sbjct: 369 FALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILI--------QATMLE------------------ 189
           +++ A +    +      P V+TY  LI        Q   LE                  
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488

Query: 190 ---------GQTDKAMKL----------LDEM-------GMCKKGMVGQAFQFVRSLESR 223
                    G+ ++AM L          LD +       G+ K G +  AF+F + L  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD + YN+ +  L  +GK++E + ++TEM + GL+P+  TY+ +I S CR G+T  A
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L   K   + P+  +Y+ L++     G ++ A   L+ M+S G  P  + +  +L A
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             ++   D  L+I E + + G   +++ YNT+   L   G   +A  ++ EML  GI PD
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N+LI   C+   +D A      M      P + ++N ++ G     RI E+  VL 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M + G +PN  TY +L+ G G    + EAM L
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRL 821



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 223/485 (45%), Gaps = 53/485 (10%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           DV+    LI  + +   +  A+ V + +   G P DV  YN L++GFC+A Q++ A  VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D ++  G  P+V TY   I   C    +E AF +++ ++R+     V+T + L+     +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+  +A  L  EM                  + K G   +    +  + SRG   D+++Y
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+  L   GK +E +  +   +S  L  N VTY++LI +LC+    ++A  VL   +E
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK------ 346
           K ++P+  ++  +I+ + K G LD A E+   M   G  P++V Y T++  F K      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 347 -----------------------------NGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
                                        NG  ++A+ +F+  S  G   +  +Y T+  
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L+ +GD   A     E++ + + PD + YN  I+CLC  G   EA  +L +M +   +P
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKP 587

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
              +YN +I+  C+     +++++L  M     KPN  TY  L+ G+   G   +A  L 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 498 NALVS 502
           N +VS
Sbjct: 648 NEMVS 652



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 203/445 (45%), Gaps = 21/445 (4%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAY 109
           GK +E++   +    +G   D V  T LI   F+      A +   E++++   PD   Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N  I+  C   + + A  +L  +R+ G  PD  TYN MI S C +G    A K+  ++  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            + KP +ITY  L+      G  +KA  LL+E  M   G    +    R L++       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE--MVSAGFSPSSLTHRRVLQA------- 668

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            S +  L  +L++ +W         M++ GL  ++  Y+ L+  LC  G T  A  VL  
Sbjct: 669 CSQSRRLDVILDIHEW---------MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G+ PD  +++ LI  +CK   LD A      M+     P+I  +NT+L      G 
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A  +  ++   G  PN  +Y+ + +      +K+ A+ +  EM+ KG  P   TYN+
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LIS   + GM+ +A  L  DM+     PT  +Y+I++ G+ + R   E  + L  M EKG
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 470 CKPNETTYVLLIEGIGYGG--WRAE 492
             P++ T   +       G  W+A+
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQ 924



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 215/462 (46%), Gaps = 18/462 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL 98
           F  +I    + G  D++  +   M   G  P+VV    LI  FF+ +  + A+ V  ++L
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  E + F  ++L++G  +  +IE A  +       G S D V Y  +I  L   G + 
Sbjct: 477 CEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AFK   +L+  N  P  + Y + I    + G+  +A  +L EM                
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMI 596

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C+KG   +A + +  ++    +P++I+YN L+  L   G  E+ + L+ EM+S G  
Sbjct: 597 VSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+ +T+  ++ +  +  + +  +D+       GL  D   Y+ L+   C  G    A   
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+  G  PD + +N ++   CK+ + D A   + ++      PN++++NT+   L S
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  ++ EM   G+EP+ +TY+ L++   +     EA+ L  +M    F P V +
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           YN +I  F K   + ++ E+   M ++G  P   TY +L+ G
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 182/400 (45%), Gaps = 35/400 (8%)

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           ++   D  + NAL+   C+   + L    +  LRS    P  V YNI++ +L       +
Sbjct: 67  RFRPADPASLNALLYSHCR---LRLLRPAIALLRSS--RPTTVAYNILLAALSDHAHAPA 121

Query: 160 AFKVFDQLLRDNCKPTV----ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
                  +L + CK  V    +T   L+      GQ D A  L D  G            
Sbjct: 122 -------VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG------------ 162

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            + +L       DVI +N L+     +G       +   M ++GL  +VV Y+ L++  C
Sbjct: 163 GIHAL-------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G+ + A  VL   KE G+ P+  +Y P I  YC+   ++ A +  + M+ +G L D+V
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             + ++A  C++G   +A  +F ++  VG  PN  +Y T+  +L  +G     L ++ EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +S+G+  D +TY +L+  L + G  DE    L    S       ++Y ++I   CK   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNV 395

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +E+ +VL  M EK   PN  T+  +I G    G   +A E
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 167/386 (43%), Gaps = 22/386 (5%)

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L +   P   AYN L++          A  VL  +  RG   D VT N ++  LC  G +
Sbjct: 95  LLRSSRPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A  + D+    +    VI +  LI      G T  A+ + D M               
Sbjct: 152 DAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM--------------- 195

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
               ++G   DV+ YN L+      G+ +    ++  M   G++PNV TY+  I   CR 
Sbjct: 196 ---TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E+A D+       G+  D  +   L++  C+DGR   A      M   G +P+ V Y
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTY 312

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++ +  K G   + L +  ++   G   ++ +Y  +   L   G        +   LS
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             +  + +TY  LI  LC+   VDEA  +L++ME     P V++++ +I GF K   +++
Sbjct: 373 DNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
           + E    M E+G  PN  TY  LI+G
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDG 458



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 9/227 (3%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L+ S CR      A+ +LR+++     P   +Y+ L++A         A   L  M   G
Sbjct: 79  LLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---APAVLAEMCKRG 130

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              D V  NT+LA  C+NG  D A  + ++   +    +V  +NT+ +     GD   AL
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAAL 189

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   M ++G+  D + YN+L++  CR G VD A G+L  M+     P V +Y   I+ +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+T+ + E+ ++   M   G   +  T   L+ G+   G  +EA  L
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 18/255 (7%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + D  L   E M+  G   D+ +   L++       + KA  V+E +   G  PD   +N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI G CK++ ++ A     ++  +  SP++ T+N ++G L S G I  A  V  ++ + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
             +P  +TY IL+     +    +AM+L  EM                    K GM+ QA
Sbjct: 794 GLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +  + ++ RG  P   +Y++L+     +    E +K + +M  +G  P+  T S +  +
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 274 LCRDGKTEDAVDVLR 288
             + G T  A  +L+
Sbjct: 914 FSKPGMTWQAQRLLK 928



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E++     MV  G  P V     LI  F +     +A  + + ++K G  P    Y+ L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           SG+ +        K L  ++ +GFSP   T + +  +    GM   A ++   L R
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 240/482 (49%), Gaps = 26/482 (5%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
           M+  G   +V     L+K   +  +  KAV ++ E+      PDVF+YN +I GFC+  +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +E A ++ + ++  G S  +VT+ I+I + C  G ++ A     ++     +  ++ YT 
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI+     G+ D+   L DE+                 G CK G + +A +    +  RG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +P+V +Y  L+  L  +GK +E  + +  MI +  EPN VTY+I+I+ LC+DG   DAV
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTILA 342
           +++   K++   PD  +Y+ L+   C  G LD A + L  M+ D     PD+++YN ++ 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 343 AFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             CK     QAL+I++ L + +G    V++ N + ++   +GD  +A+ +  ++    I 
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
            +  TY ++I   C+ GM++ A GLL  M  +  +P+V  YN ++   CK   ++++  +
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF---KRLNRTF 518
              M      P+  ++ ++I+G    G    A  L   + S   +S D F   K +NR  
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSKLINRFL 610

Query: 519 PL 520
            L
Sbjct: 611 KL 612



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 207/416 (49%), Gaps = 22/416 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ--ERKSNKAVRVMEILEK 100
           LI    +AGK DE++ F++ M   G + D+V+ T LI+ F    E    KA+   E+LE+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL-FDEVLER 276

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
              P    YN LI GFCK  Q++ A+++ + +  RG  P+V TY  +I  LC  G  + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            +  + ++  + +P  +TY I+I     +G    A+++++ M                 G
Sbjct: 337 LQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 204 MCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           +C KG + +A + +  +  +S    PDVISYN L+  L    +  +   +   ++ +   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            + VT +IL++S  + G    A+++ +   +  +  ++ +Y  +I  +CK G L++A   
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M      P + +YN +L++ CK G+ DQA  +FE++      P+V S+N M      
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +GD   A  ++  M   G+ PD  TY+ LI+   + G +DEA+     M  + F P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 142/284 (50%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF F R +       + +S + LL   + M K      ++  M+ RG   NV  ++IL+ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LCR+ +   AV +LR  +   L PD +SY+ +I  +C+   L+ A+E  + M   GC  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V +  ++ AFCK G  D+A+   +++  +G   ++  Y ++       G+  R   + 
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E+L +G  P  ITYN+LI   C+ G + EA  +   M     RP V +Y  +I G C  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +  E+++ L  M EK  +PN  TY ++I  +   G  A+A+E+
Sbjct: 331 GKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 190/404 (47%), Gaps = 25/404 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LI+   + G+  E+    E M+  G +P+V   T LI       K+ +A++ + ++ EK 
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+   YN +I+  CK   +  A ++++ ++ R   PD +TYNI++G LC++G ++ A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 162 KVFDQLLRDN--CKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           K+   +L+D+    P VI+Y  LI     E +  +A+ + D +                 
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
              K G V +A +  + +       +  +Y  ++      G     + L+ +M    L+P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V  Y+ L+SSLC++G  + A  +    +     PD  S++ +I    K G +  A   L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G  PD+  Y+ ++  F K G  D+A+  F+K+ D G  P+    +++     S 
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           G+  +    ++E++ K ++ D I  +  ++C   D M + +  +
Sbjct: 648 GETDK----LTELVKKLVDKD-IVLDKELTCTVMDYMCNSSANM 686



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 158/328 (48%), Gaps = 37/328 (11%)

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           G AF  +  +  RG   +V ++N+LL+ L    +  +   L+ EM    L P+V +Y+ +
Sbjct: 124 GFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL-------- 322
           I   C   + E A+++    K  G +    ++  LI A+CK G++D A+ FL        
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243

Query: 323 ---------------------------DYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
                                      D ++  G  P  + YNT++  FCK G   +A E
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           IFE + + G  PNV +Y  +   L   G    AL  ++ M+ K  EP+ +TYN +I+ LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLC 363

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG--CKPN 473
           +DG+V +AV ++  M+  R RP  I+YNI++ G C    ++E+ ++L  M +      P+
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALV 501
             +Y  LI G+       +A+++ + LV
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLV 451



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 122/239 (51%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N V+ S L+    +  KT  A  VL    ++G   + Y+++ L+   C++     A+  L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M  +  +PD+ +YNT++  FC+    ++ALE+  ++   GC  ++ ++  +  A   +
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+G + EM   G+E D + Y SLI   C  G +D    L  ++      P  I+Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           N +I GFCK  ++ E+ E+   M E+G +PN  TY  LI+G+   G   EA++  N ++
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 151/341 (44%), Gaps = 21/341 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-- 100
           +I +  + G   +++  +E M     +PD +    L+     +   ++A +++ ++ K  
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 101 -YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
            Y +PDV +YNALI G CK N++  A  + D L  +  + D VT NI++ S    G +  
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A +++ Q+          TYT +I      G  + A  LL +M                 
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK+G + QA++    ++     PDV+S+N+++   L  G  +  E L+  M   GL P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TYS LI+   + G  ++A+       + G  PDA+  D ++      G  D   E +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657

Query: 323 DYMISDGCLPDIVNYNTILAAFCK-NGNADQALEIFEKLSD 362
             ++    + D     T++   C  + N D A  +     D
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 200/396 (50%), Gaps = 18/396 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F Y+  ISG CK  + EL + +L  + + GF PD+  +NI +  LC    +  A + F  
Sbjct: 80  FTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFC 139

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +++   +P V++YTILI      G+   A+++ + M                 G+C    
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199

Query: 210 VGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           V  A++ V   ++S   +  ++ YN L+      G+ E+ E L + M   G EP++VTY+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYN 259

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L++    +   + A  V+      G+  DAYSY+ L+  +C+    D    F+   +  
Sbjct: 260 VLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEP 319

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
               D+V+Y+T++  FC+  N  +A ++FE++   G   NV ++ ++  A    G+   A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVA 379

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             ++ +M   G+ PD I Y +++  LC+ G VD+A G+  DM      P  ISYN +I G
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISG 439

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            C++ R+ E+I++   M  K C P+E T+  +I G+
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 188/384 (48%), Gaps = 18/384 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD++A+N  +   C+ N++  A +    +  RG  PDVV+Y I+I  L   G +  A ++
Sbjct: 112 PDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE------------------MGMC 205
           ++ ++R    P       L+       + D A +++ E                   G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFC 231

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A      +   GC+PD+++YN+LL    +    +  E +MTEM+  G++ +  
Sbjct: 232 KAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAY 291

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +Y+ L+   CR    +     +    E     D  SY  LI  +C+      A +  + M
Sbjct: 292 SYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEM 351

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G + ++V + +++ AF + GN+  A ++ ++++++G  P+   Y T+   L  SG+ 
Sbjct: 352 RQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A G+ ++M+   I PD I+YNSLIS LCR G V EA+ L  DM+     P  +++  I
Sbjct: 412 DKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471

Query: 446 ILGFCKTRRINESIEVLAAMFEKG 469
           I G  + ++++ + +V   M +KG
Sbjct: 472 IGGLIREKKLSAAYKVWDQMMDKG 495



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 22/376 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM--EILEK 100
           LI   FRAGK  +++    +M+ +G  PD   C  L+      RK + A  ++  EI   
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             +  +  YNALISGFCKA +IE A  +   +   G  PD+VTYN+++       M++ A
Sbjct: 215 RVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             V  +++R   +    +Y  L++        D+    +                 ++ +
Sbjct: 275 EGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFM-----------------LKEM 317

Query: 221 ESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           E RG C  DV+SY+ L+ T       ++  KL  EM  +G+  NVVT++ LI +  R+G 
Sbjct: 318 EPRGFC--DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGN 375

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           +  A  +L    E GL+PD   Y  ++   CK G +D A    + MI     PD ++YN+
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNS 435

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +++  C++G   +A+++FE +    C P+  ++  +   L        A  +  +M+ KG
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKG 495

Query: 400 IEPDEITYNSLISCLC 415
              D    ++LI   C
Sbjct: 496 FTLDRDVSDTLIKASC 511



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 25/401 (6%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRS---RGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
            AY + I+   K+  I+ A +V D +R    R FS D   YN  IG L      E A  +
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSD---YNRFIGVLVKESRFELAEAI 66

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           +  ++         TY+  I                   G+CK          +R +E+ 
Sbjct: 67  YRDMMPMGFSLIPFTYSRFIS------------------GLCKVKKFELIDALLRDMETL 108

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  PD+ ++N+ L  L    K     +    M+ RG EP+VV+Y+ILI+ L R GK  DA
Sbjct: 109 GFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP-DIVNYNTILA 342
           V++  A    G++PD  +   L+   C   ++DLA E +   I    +   IV YN +++
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALIS 228

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            FCK G  ++A  +   +S +GC P++ +YN + +  + +    RA G+++EM+  GI+ 
Sbjct: 229 GFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQL 288

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D  +YN L+   CR    D     ++     R    V+SY+ +I  FC+     ++ ++ 
Sbjct: 289 DAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLF 348

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             M +KG   N  T+  LI+     G  + A +L + +  +
Sbjct: 349 EEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTEL 389



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           ++G  D++      M+ +   PD +    LI    +  +  +A+++ E ++ K   PD  
Sbjct: 407 KSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDEL 466

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +  +I G  +  ++  A KV D++  +GF+ D    + +I + CS
Sbjct: 467 TFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 216/430 (50%), Gaps = 19/430 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     M+    +P  V   K +    ++++ +  V +   ++ +G   + +  N L
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+  C+ + I  A  VL ++   G  PD VT+  +I  LC+ G I+ A ++F+++   + 
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P  +T+TIL+                    +CKKGMV +A     ++  +G +P++ +Y
Sbjct: 188 MPNTVTFTILVDV------------------LCKKGMVSEARCVFETMTEKGVEPNIYTY 229

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+       +  +  K+   M+ +G  P+V +YSILI+  C+  + ++A  +L    E
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           K L P+  +Y+ L+   C    L  A E    M S G LP++  Y+ +L   CK+G+ ++
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL++   + +    P++  YN +   ++ +G    A  + S++ + GI P   TYN +I 
Sbjct: 350 ALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIK 409

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            L ++G+ DEA  L   ME   F P   SYN+II GF + +  + +I+++  M  +    
Sbjct: 410 GLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSA 469

Query: 473 NETTYVLLIE 482
           + +T+ +L++
Sbjct: 470 DSSTFKMLLD 479



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 179/357 (50%), Gaps = 17/357 (4%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           I+ A   F +++  N +P+ +     + +   + Q    + L ++M              
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
               +C+   +  A   +  +   G QPD +++  L+  L N G+ +E  +L  EM  R 
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
             PN VT++IL+  LC+ G   +A  V     EKG+ P+ Y+Y+ L++ YC    ++ A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  + M+  GC P + +Y+ ++  +CK+   D+A  +  ++S+    PN  +YNT+   L
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             +   + A  +  +M S G+ P+  TY+ L+  LC+ G ++EA+ LL  M+  +  P +
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + YNI+I G     ++  + E+ + +F  G +P+  TY ++I+G+   G   EA +L
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 19/412 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P        +    K  Q      + +++   G + +  T NI+I SLC    I  A  V
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++ +   +P  +T+T LI                   G+C +G + +A +    +  R
Sbjct: 144 LSKMFKLGIQPDSVTFTTLIN------------------GLCNEGRIKEAVELFNEMAGR 185

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              P+ +++ +L+  L   G   E   +   M  +G+EPN+ TY+ L++  C   +  DA
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             V      KG  P  +SY  LI+ YCK  R+D A   L  M     +P+ V YNT++  
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C   +  +A E+F+K+   G  PN+ +Y+ +   L   G    AL +++ M  + +EPD
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            + YN LI  +   G ++ A  L   + +   RP+V +YNI+I G  K    +E+ ++  
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFR 425

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH-AISRDTFKRL 514
            M + G  P+  +Y ++I+G       + A++L + +V    +    TFK L
Sbjct: 426 KMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKML 477



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 19/379 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI    R      ++  +  M   G +PD V  T LI     E +  +AV +  E+  + 
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   +  L+   CK   +  A  V + +  +G  P++ TYN ++   C R  +  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           KVF+ ++   C P+V +Y+ILI                   G CK   + +A   +  + 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILIN------------------GYCKSRRIDEAKALLTQMS 288

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            +   P+ ++YN L++ L +     E ++L  +M S G+ PN+ TYSIL+  LC+ G  E
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+ +L + +E+ L PD   Y+ LI      G+L++A E    + ++G  P +  YN ++
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
               K G +D+A ++F K+ D G  P+  SYN +      + D   A+ +I EM+ +   
Sbjct: 409 KGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468

Query: 402 PDEITYNSLISCLCRDGMV 420
            D  T+  L+     D ++
Sbjct: 469 ADSSTFKMLLDLESHDEII 487



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI     P+ V     + S+ +  +    V +       G+  + Y+ + LI++ C+   
Sbjct: 77  MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSH 136

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A+  L  M   G  PD V + T++   C  G   +A+E+F +++     PN  ++  
Sbjct: 137 IHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTI 196

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L   G    A  +   M  KG+EP+  TYN+L++  C    +++A  +   M    
Sbjct: 197 LVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P+V SY+I+I G+CK+RRI+E+  +L  M EK   PN  TY  L++G+ +     EA 
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316

Query: 495 ELANALVS 502
           EL   + S
Sbjct: 317 ELFKKMCS 324



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
            +S    D  +D A+     MI     P  V     L +  K       + +  ++   G
Sbjct: 57  FVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFG 116

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
              N  + N + ++L        A+ ++S+M   GI+PD +T+ +LI+ LC +G + EAV
Sbjct: 117 VAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAV 176

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            L  +M      P  +++ I++   CK   ++E+  V   M EKG +PN  TY  L+ G
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 50/119 (42%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+     M+     P  +     +  + +       V L   M+         + NI+I 
Sbjct: 70  AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILIN 129

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             C+   I+ ++ VL+ MF+ G +P+  T+  LI G+   G   EA+EL N +    A+
Sbjct: 130 SLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 224/461 (48%), Gaps = 17/461 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  +++      M   G +P+V +   L++ F ++     A  + +   
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           ++G  +V  YN L+    +  ++  A  + +++ S+G +P +V+YN +I   C +G ++ 
Sbjct: 423 EHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDK 482

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
           A+ +   +L    KP  +TYT+LI     +G +++A  + ++M                 
Sbjct: 483 AYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVIN 542

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+ K G V +    + +   +G     I+YN ++      G  +       EM   G+ P
Sbjct: 543 GLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V+TY+ LI  LC+  K   A+++    K KG+  D  +Y  LI  +CK   ++ A +F 
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFF 662

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             ++  G  P+ V YN++++ F    N + AL + +++     P ++  Y ++   L   
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKE 722

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    AL + SEMLSK I PD + Y  LI+ L  +G ++ A  +L +M+     P+V+ Y
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVY 782

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           NI+I G  +   + E+  +   M +KG  P++TTY +L+ G
Sbjct: 783 NILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 221/503 (43%), Gaps = 52/503 (10%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F+     F  L+K   R  K  +++    +M+ +   P V +   L+    +      A 
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++  E++E+    D +  + ++    K  + E   K     + RG   D   Y+I++ ++
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C R  +  A ++  ++      P+  TYT +I A + +G   +A++L DEM         
Sbjct: 266 CRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNV 325

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C  G V  A Q    +   G  PDV+ +++L+     +G  E+  +L T 
Sbjct: 326 IVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTR 385

Query: 255 MISRGLEP----------------------------------NVVTYSILISSLCRDGKT 280
           M   G++P                                  NVVTY+IL+  L   GK 
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKV 445

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A ++      KG+TP   SY+ LI  +CK G +D A   L  ++  G  P+ V Y  +
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL 505

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +  F K G++++A  +FE++      P   ++NT+ + L  +G        ++  + +G 
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
               ITYNS+I    ++G VD A+    +M  +   P VI+Y  +I G CK+ +I  ++E
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625

Query: 461 VLAAMFEKGCKPNETTYVLLIEG 483
           + + M  KG K +   Y  LI+G
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDG 648



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 199/448 (44%), Gaps = 28/448 (6%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           +PN  +++  ++      L++ ++  G FDE+   +E  + N     VV    L+K   +
Sbjct: 392 QPNVFIVNSLLEGFHEQNLLEHAY--GLFDEA---VEHGITN-----VVTYNILLKWLGE 441

Query: 85  ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             K N+A  + E +   G  P + +YN LI G CK   ++ A  +L  +  RG  P+ VT
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVT 501

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM- 202
           Y ++I     +G  E AF VF+Q++  N  PT  T+  +I      G+  +    L+   
Sbjct: 502 YTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFI 561

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G  K+G V  A    R +   G  PDVI+Y  L+  L    K  
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIG 621

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
              ++ ++M  +G++ +VV YS LI   C+    E A        + GLTP+   Y+ +I
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           S +     ++ A+     MI +    D+  Y +I+    K G    AL+++ ++      
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P++  Y  + + L ++G    A  ++ EM    I P  + YN LI+   R+G + EA  L
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRR 454
             +M      P   +Y+I++ G  K   
Sbjct: 802 HDEMLDKGLVPDDTTYDILVNGKLKVSH 829



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 36/314 (11%)

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G + D   +N LL++ + + K  +  +    M+   L P V   + L++++ R     DA
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 284 VDVLRAAKEKGLTPDAYS-----------------------------------YDPLISA 308
             +     E+G+  D Y+                                   Y  L+ A
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            C+   L+LA E L  M   G +P    Y  ++ A  K GN  +AL + +++  VG P N
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V    ++       GD   AL +  E++  G+ PD + ++ LI+   + G +++A  L  
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            M+    +P V   N ++ GF +   +  +  +     E G   N  TY +L++ +G  G
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELG 443

Query: 489 WRAEAMELANALVS 502
              EA  L   +VS
Sbjct: 444 KVNEACNLWEKMVS 457



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 1/140 (0%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNAL 112
           + +L   + M+ N    D+ + T +I    +E K + A+ +  E+L K   PD+  Y  L
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+G     Q+E A+K+L  +     +P V+ YNI+I      G ++ AF++ D++L    
Sbjct: 751 INGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGL 810

Query: 173 KPTVITYTILIQATMLEGQT 192
            P   TY IL+   +    T
Sbjct: 811 VPDDTTYDILVNGKLKVSHT 830



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 74/167 (44%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N +L +F +      A+E F  + +    P V   N + +A+        A  +  EM+
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +GI  D  T + ++    ++G  +E      + +         +Y+I++   C+   +N
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLN 272

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            + E+L  M E G  P++ TY  +I      G   EA+ L + +VS+
Sbjct: 273 LACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSV 319



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/216 (18%), Positives = 91/216 (42%)

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +L  +   G   D+  ++ L+ ++ +  ++  A+E    M+    +P +   N +L A  
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +      A ++++++ + G   +  + + +  A    G          E   +G+E D  
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
            Y+ L+  +CR   ++ A  LL +M    + P+  +Y  +I+   K     E++ +   M
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              G   N      L++G    G    A++L + +V
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVV 352


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 214/437 (48%), Gaps = 31/437 (7%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           M +  K   P +F +  ++    KAN   +   +  ++   G + ++VT +I+I      
Sbjct: 1   MLLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQL 60

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
           G    +F VF  +L+       IT+T LI+   L+G+  KA+   D++            
Sbjct: 61  GQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSY 120

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK G    A +F+R ++ +  QPDV+ YN ++  L       +   L  EM++
Sbjct: 121 GTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVA 180

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           + + P+VVTY+ LI  LC   + +DA+ +L     + + P  Y++  LI A+CK+G++  
Sbjct: 181 KRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKE 240

Query: 318 AIEFLDYMISDGCLPDIVNYNTI-----LAAFCKNGNA---------DQALEIFEKLSDV 363
           A      M+ +   P+IV YN++     L    K   +         D+A+ +FE++   
Sbjct: 241 AKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFK 300

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
              P++  YN++   L  SG    AL  I EM  +G  PD  TYNSL+  LC++  VD+A
Sbjct: 301 QIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKA 360

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + LL  ++    +P+V +YNI+I G CK+ R+ ++ +V   +  KG   +  TY  +I+G
Sbjct: 361 IELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKG 420

Query: 484 IGYGGWRAEAMELANAL 500
               G   E + + + +
Sbjct: 421 FCKKGLFDETLAMVSKM 437



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  +  LI    + G+   +L F+  +     +PDVVM   +I    +++  N A 
Sbjct: 113 FKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAF 172

Query: 93  RV-MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E++ K   P V  YN LI G C   Q++ A  +L ++     +P V T++I+I + 
Sbjct: 173 NLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAF 232

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G ++ A  VF  +++++ KP ++TY  L+    L     KA  + + M      MV 
Sbjct: 233 CKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM----IKMVD 288

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A      +  +   PD++ YN L+  L   G+     K + EM  RG  P++ TY+ L+
Sbjct: 289 EAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLL 348

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +LC++   + A+++L   K++G+ P   +Y+ LI+  CK GRL  A +  + ++  G  
Sbjct: 349 DALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYN 408

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
            D+  YN ++  FCK G  D+ L +  K+ D GC P+  +   +  +L+  G+  +A G 
Sbjct: 409 TDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA-GK 467

Query: 392 ISEMLSKG 399
             EM+ +G
Sbjct: 468 FREMIVRG 475



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 203/458 (44%), Gaps = 68/458 (14%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
           +F K++    +A  +   +     M  NG   ++V  + LI  + Q  ++  +  V   I
Sbjct: 14  EFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANI 73

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
           L+K    D   +  LI G C   +I  A    D++ ++GF  + V+Y  +I  LC  G  
Sbjct: 74  LKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQT 133

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A +   ++     +P V+ Y  +I                   G+CK  +V  AF   
Sbjct: 134 RAALEFLRRIDGKLVQPDVVMYNTIID------------------GLCKDKLVNDAFNLY 175

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + ++   P V++YN L+  L  M + ++   L+ +MI   + P V T+SILI + C++
Sbjct: 176 FEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKE 235

Query: 278 GKTEDA----------------------------VDVLRAAKE----------------- 292
           GK ++A                            V+V++ AK                  
Sbjct: 236 GKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFE 295

Query: 293 ----KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               K + PD   Y+ LI   CK GR   A++F+  M   G  PDI  YN++L A CKN 
Sbjct: 296 EMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNY 355

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           + D+A+E+  KL D G  P+V +YN + + L  SG    A  +  ++L KG   D  TYN
Sbjct: 356 HVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYN 415

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           ++I   C+ G+ DE + ++  M+ +   P   +  III
Sbjct: 416 AMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 2/310 (0%)

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L  +   P +  +  +L +L+    +     L  +M   GL  N+VT SILI+   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
              +  V     +KG   DA ++  LI   C  G +  A+ F D +++ G   + V+Y T
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++   CK G    ALE   ++      P+V  YNT+   L        A  +  EM++K 
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           I P  +TYN+LI  LC    + +A+GLL  M      PTV +++I+I  FCK  ++ E+ 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLN--RT 517
            V A M ++  KPN  TY  L++G        +A  + N ++ M   + + F+ ++  + 
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 518 FPLLDVYKEI 527
           +P + +Y  +
Sbjct: 303 YPDMVIYNSL 312


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 235/486 (48%), Gaps = 30/486 (6%)

Query: 23  ETRPNTHLLSFDVKETQ------FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           ET P++ L      E Q      + K  ++ F A    E    +  ++AN    + +   
Sbjct: 70  ETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA- 128

Query: 77  KLIKKFFQE-RKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
            L+  F +    SN  +   + +L  +G  +    + L+  + K  +++LA +  DR   
Sbjct: 129 -LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            GF    ++ N M+ SL   G I     V+ +++R      V+T+ ++I      G+  K
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A  ++++M                 G CK G + +A   ++ + ++   P+ I++N+L+ 
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                      +K+  EM  +GL+PNVVTY+ LI+ LC +GK ++A+ +       GL P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +Y+ LI+ +CK   L  A E LD +   G  P+++ +NT++ A+ K G  D A  + 
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
             + D G  PNVS+YN +       G+   A  +  EM   G++ D +TYN L+  LC+ 
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487

Query: 418 GMVDEAVGLLVDM---ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           G   +AV LL +M   E    R  +++YN++I GFC   ++ E+  +L  M EKG  PN 
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547

Query: 475 TTYVLL 480
           TTY +L
Sbjct: 548 TTYDIL 553



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 185/383 (48%), Gaps = 45/383 (11%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R   ++++FDV       +I    + GKF ++   +E M A G  P V+    +I  + +
Sbjct: 224 RIGVNVVTFDV-------VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 85  ERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
             K  KA  ++ E++ K   P+   +N LI GFC+   +  A KV + ++ +G  P+VVT
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG 203
           YN +I  LCS G ++ A  + D++     KP V+TY  LI                   G
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN------------------G 378

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            CKK M+ +A + +  +  RG  P+VI++N L+      G+ ++   L + M+  G+ PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V TY+ LI   CR+G  ++A  + +  +  GL  D  +Y+ L+ A CK G    A+  LD
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLD 498

Query: 324 YMI---SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            M      G   +IV YN ++  FC  G  ++A  +  ++ + G  PN ++Y        
Sbjct: 499 EMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY-------- 550

Query: 381 SSGDKIRALGMISEMLSKGIEPD 403
              D +R      EM+ KG  PD
Sbjct: 551 ---DILR-----DEMMEKGFIPD 565



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 37/307 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AGK  ++   ++ MVA    P+ +    LI  F ++     A +V E +++ G +P+V 
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LI+G C   +++ A  + D++   G  P+VVTYN +I   C + M++ A ++ D +
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +    P VIT+  LI A    G+ D A  L   M                 G C++G V
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI---SRGLEPNVVTY 267
            +A +  + +E  G + D+++YN+L+  L   G+  +  +L+ EM     +G   N+VTY
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI   C  GK E+A  +L    EKGL P+  +YD L                 D M+ 
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMME 559

Query: 328 DGCLPDI 334
            G +PDI
Sbjct: 560 KGFIPDI 566


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 26/480 (5%)

Query: 23  ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
           E + N  L+++ +       L+    +  KFDE+   +  M + G  P+  +   LI  +
Sbjct: 304 ENKVNPSLVTYGI-------LVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY 356

Query: 83  FQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
            ++   + A+RV + +   G +P+   +N L+ GFC+ NQ+E A +VL+ L S   S + 
Sbjct: 357 SRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNE 416

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
              + ++  LC     +SA K+   LL  N K      T+L+      G+  +A+ L   
Sbjct: 417 DACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFR 476

Query: 202 M------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
           +                  G+C++G + + F   + +  RG   D ISYN L+      G
Sbjct: 477 LADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSG 536

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           K EE  KL  +M+ +G +P+  TY+ L+  L   GK +D   VL  AK+ G+ P+ Y+Y 
Sbjct: 537 KIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYA 596

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            ++  YC   R+D A+   + ++ +      V YN ++AA  K GN  +A ++ + +   
Sbjct: 597 LMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSS 656

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
              P + +Y+++   +  +     A G+  EM ++G+ P+   Y +LI   C+ G +D+ 
Sbjct: 657 NIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQI 716

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +L +M S   +P  I+Y I+I G+CK     E+ ++L  M   G  P+  TY +L +G
Sbjct: 717 ESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG 776



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 227/481 (47%), Gaps = 20/481 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           ++G+ +E+L F   MV N   P +V    L+    +  K ++A  V+ E+  K   P+ F
Sbjct: 288 KSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEF 347

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +NALI G+ +   ++ A +V D +  +G  P+ VT+N ++   C    +E A +V + L
Sbjct: 348 VFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYL 407

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L +         + ++       + D A+K++  +                 G+CK G  
Sbjct: 408 LSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKH 467

Query: 211 GQAFQ-FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
            +A   + R  + +G   +  + N LL  L   G  EE   +  EM+ RGL  + ++Y+ 
Sbjct: 468 LEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNT 527

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   C+ GK E+A  +     ++G  PD Y+Y+ L+      G++D     L      G
Sbjct: 528 LIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHG 587

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
            +P+I  Y  +L  +C     D A+ +F KL       +   YN + +A   +G+   A 
Sbjct: 588 VVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAF 647

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   M S  I P   TY+S+I  +C + +V+EA G+  +M +    P V  Y  +I G+
Sbjct: 648 KLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY 707

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           CK  ++++   +L  M     +PN+ TY ++I+G    G   EA +L N +++ + IS D
Sbjct: 708 CKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA-NGISPD 766

Query: 510 T 510
           T
Sbjct: 767 T 767



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 210/453 (46%), Gaps = 28/453 (6%)

Query: 53  FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNA 111
           FD  + F     + G  P +  C  L+    +  + +K+ RV + + + G   DV+ Y  
Sbjct: 191 FDTFMLF----TSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYAT 246

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
            I+ +CK  +I+ A  +  ++   G  P+VVTYN +I  LC  G +E A     +++ + 
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK 306

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             P+++TY IL+   +   + D+A  +L EM                   S+G  P+   
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEM------------------YSKGFSPNEFV 348

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           +N L+      G  ++  ++  +M  +GL+PN VT++ L+   CR  + E A  VL    
Sbjct: 349 FNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL 408

Query: 292 EKGLT--PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              L+   DA SY  ++   CK  + D A++ +  ++      +      ++   CK G 
Sbjct: 409 SNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGK 466

Query: 350 ADQALEIFEKLSD-VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             +A++++ +L+D  G   N ++ N +   L   G+      +  EM+ +G+  D I+YN
Sbjct: 467 HLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYN 526

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C+ G ++EA  L   M    F+P   +YN ++ G     ++++   VL    + 
Sbjct: 527 TLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDH 586

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           G  PN  TY L++EG         A+ L N LV
Sbjct: 587 GVVPNIYTYALMLEGYCNADRIDNAVSLFNKLV 619



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 197/440 (44%), Gaps = 24/440 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + GK DE++     M   G  P+VV    LI    +  +  +A+     ++E    P + 
Sbjct: 253 KGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLV 312

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  L++G  K  + + AN VL  + S+GFSP+   +N +I     +G ++ A +V D +
Sbjct: 313 TYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDM 372

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR--GC 225
                KP  +T+  L+Q                  G C+   + QA Q +  L S     
Sbjct: 373 TLKGLKPNAVTHNTLLQ------------------GFCRTNQMEQAEQVLEYLLSNVLSV 414

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
             D  SY  +L  L    K++   K++  ++ R ++ N    ++L+  LC+ GK  +A+D
Sbjct: 415 NEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAID 472

Query: 286 V-LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +  R A +KGL  +  + + L+   C+ G ++        M+  G + D ++YNT++   
Sbjct: 473 LWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGC 532

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+G  ++A ++ EK+   G  P+  +YN +   L   G       ++ E    G+ P+ 
Sbjct: 533 CKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNI 592

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TY  ++   C    +D AV L   +   +   + + YNI+I    K     E+ ++  A
Sbjct: 593 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDA 652

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           M      P   TY  +I G+
Sbjct: 653 MRSSNIHPTIFTYSSIIHGM 672



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 176/378 (46%), Gaps = 20/378 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYG-EPDV 106
           ++ KFD +L  +++++    K +  + T L+    +  K  +A+ +   + +K G   + 
Sbjct: 428 KSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANT 487

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
              NAL+ G C+   +E    V   +  RG   D ++YN +I   C  G IE AFK+ ++
Sbjct: 488 TTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEK 547

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +++   KP   TY  L++                  G+  KG +    + +   +  G  
Sbjct: 548 MMKQGFKPDTYTYNFLMK------------------GLADKGKMDDVGRVLHEAKDHGVV 589

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++ +Y ++L    N  + +    L  +++   +E + V Y+ILI++  + G   +A  +
Sbjct: 590 PNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKL 649

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
             A +   + P  ++Y  +I   C +  ++ A    + M ++G +P++  Y  ++  +CK
Sbjct: 650 RDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCK 709

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  DQ   I ++++     PN  +Y  M       G+   A  +++EM++ GI PD +T
Sbjct: 710 LGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVT 769

Query: 407 YNSLISCLCRDGMVDEAV 424
           Y  L    C++  ++E +
Sbjct: 770 YTVLQKGYCKENELEETL 787



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 146/298 (48%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           AF       S+G  P + S N L+ +L+   +  +  ++   M   G+  +V TY+  I+
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           + C+ GK ++AV +     E G+ P+  +Y+ LI   CK GRL+ A+ F   M+ +   P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            +V Y  ++    K    D+A  +  ++   G  PN   +N +       G+   AL + 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M  KG++P+ +T+N+L+   CR   +++A  +L  + S        + + ++   CK+
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
            + + +++++ A+  +  K N++   LL+ G+   G   EA++L   L     ++ +T
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANT 487


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 207/429 (48%), Gaps = 21/429 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PDVFAYNALISGFCKANQIE 123
           GC PDV   + L+K    E+K  +A  ++ ++ + G+   PDV +Y+ +I GF K   + 
Sbjct: 79  GCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVG 138

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +  ++   G  P+VVT N +I  LC    ++ A  V  Q++ ++  P   TY  LI
Sbjct: 139 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLI 198

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
              +  GQ  +A+++L EM                     G +P+V++YNML+  L   G
Sbjct: 199 HGYLSSGQWTEAVRILKEM------------------SRDGQRPNVVTYNMLIDCLCKSG 240

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
              E  ++   MI  G +P+  TY  L+     +G   +  +V     + G+  + +++ 
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             I AYCK GRLD A      M   G +PDIV Y T++   CK G  D A+  F ++ D 
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  PN+ ++ T+       G   +A  +  EM+ +GI PD   + ++I  L ++G V EA
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             L   M     +P V+SYN +I G+     + E +++L  M   G KP   T+  L++G
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480

Query: 484 IGYGGWRAE 492
           +   G + +
Sbjct: 481 MVSMGLKPD 489



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 194/412 (47%), Gaps = 21/412 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           +  L+K      K +E+   I  M  +G  C PDVV  + +I  FF+E    KA  +  +
Sbjct: 87  YSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCK 146

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L+    P+V   N++I G CK   ++ A  VL ++      P+  TYN +I    S G 
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
              A ++  ++ RD  +P V+TY +LI                    +CK G   +A + 
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDC------------------LCKSGFHAEAREI 248

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
             S+   G +PD  +Y  LL      G   E   +   M+  G+  N  T+SI I + C+
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G+ ++A       ++ G  PD  +Y  +I   CK GRLD A+     MI DG  P+I+ 
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           + T++  F   G  ++A E+F ++ D G PP+V+ +  M   L+  G    A  +   M 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             G +P+ ++YN++I      G V E + LL DM     +PT +++N ++ G
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 186/394 (47%), Gaps = 19/394 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
           PD+  +  LIS  C A  + L    L ++   G   D V +  ++ +LC++     A   
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           V  ++    C P V +Y+ L++    E + ++A +L+  M                + + 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMM----------------AEDG 114

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C PDV+SY+ ++      G   +   L  +M+  G+ PNVVT + +I  LC+    + 
Sbjct: 115 DNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 174

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  VL+   ++ + P+  +Y+ LI  Y   G+   A+  L  M  DG  P++V YN ++ 
Sbjct: 175 AEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLID 234

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK+G   +A EIF  +   G  P+ ++Y ++     + G+ +    +   M+  G+  
Sbjct: 235 CLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRS 294

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +  T++  I   C+ G +DEA    + M+   F P +++Y  +I G CK  R+++++   
Sbjct: 295 NHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF 354

Query: 463 AAMFEKGCKPNETTYVLLIEGIG-YGGW-RAEAM 494
             M + G  PN  T+  LI G   YG W +AE +
Sbjct: 355 CQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 388



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 3/249 (1%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           ++ + P++ T+ ILIS  C  G        L    + GL  DA ++ PL+   C   R  
Sbjct: 6   AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTS 65

Query: 317 LAIEF-LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYN 373
            A+   L  M   GC PD+ +Y+T+L   C     ++A E+   +++ G  CPP+V SY+
Sbjct: 66  DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+    +  GD  +A  +  +ML  GI P+ +T NS+I  LC+   +D+A  +L  M   
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P   +YN +I G+  + +  E++ +L  M   G +PN  TY +LI+ +   G+ AEA
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEA 245

Query: 494 MELANALVS 502
            E+ N+++ 
Sbjct: 246 REIFNSMIQ 254



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 20/162 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK++++      M+  G  PDV + T +I + F+E K  +A ++ +++ 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 100 KYG-EPDVFAYNALISGFCKANQIELA-------------------NKVLDRLRSRGFSP 139
           + G +P+V +YN +I G+  A ++                      N +LD + S G  P
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 488

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           DV T   +I S C  G IE    +F ++L    K   IT  I
Sbjct: 489 DVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 212/454 (46%), Gaps = 27/454 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S  V    F  LI    +AG   ++    +    NGC  D+   T ++    + +K  +A
Sbjct: 219 SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           V +ME +   G  P +  YNAL++G CK  ++E A  +L ++   G +PDVVTY  +I  
Sbjct: 279 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 338

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           L        A+K+F ++         + YT LI+                  G+ + G +
Sbjct: 339 LGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR------------------GLLQTGKI 380

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            QA    +++ S GC PDV++ + ++  L   G+     ++   M +RGL PN V YS L
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 440

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  LC+  K + A+++L   K+   TPD  +Y+ LI   CK G ++ A  F D M+  GC
Sbjct: 441 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 500

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+  YN +++  CK GN D A  + + +S      +   Y+++   L  SG       
Sbjct: 501 KPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCM 555

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  EM   G+   + T   LI  LC+   VDEAV L   +      P   +YN II    
Sbjct: 556 LFHEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALI 613

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K+ ++NE   V   M  +  KP+  TY  L+ G+
Sbjct: 614 KSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGM 646



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 195/386 (50%), Gaps = 20/386 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFK 162
           PDV  +N LI+G+C A + E A  V+  +    G +P + T+N+++  LC  G + +A  
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            F+ + R +   +  T++ILI                   G+ K GM+ QA    +   +
Sbjct: 212 HFEAV-RRSMPVSAATFSILIN------------------GLVKAGMMIQAHSLAQETTT 252

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC  D+ +Y  ++  L    K +E   LM ++ + G  P + TY+ L++ LC+ G+ E+
Sbjct: 253 NGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+D+LR   + G TPD  +Y  LI    K+ R   A +    M S G   D V Y  ++ 
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
              + G   QA  +++ ++  GC P+V + +TM   L  +G    A+ +   M ++G+ P
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +E+ Y++LI  LC+   +D A+ +L  M+     P  I+YNI+I G CK+  +  +    
Sbjct: 433 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 492

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGG 488
             M E GCKP+  TY +LI G+   G
Sbjct: 493 DEMLEAGCKPDVYTYNILISGLCKAG 518



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 216/471 (45%), Gaps = 26/471 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYG-EPDV 106
           R  +  E+   +++ +A   +PDV     LI  +   R+  +A  V+ E+ E +G  P +
Sbjct: 131 RTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSL 190

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +N ++ G CK+ ++  A    + +R R       T++I+I  L   GM+  A  +  +
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQE 249

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
              + C   + TYT ++       +  +A+ L++++                 G+CK G 
Sbjct: 250 TTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 309

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +A   +R +   GC PDV++Y  L+  L    +  E  KL  EM SRGL  + V Y+ 
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI  L + GK   A  V +     G  PD  +   +I    K GR+  A+     M + G
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+ V Y+ ++   CK    D ALE+  ++    C P+  +YN +   L  SGD   A 
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
               EML  G +PD  TYN LIS LC+ G  D A G+L DM S+RF      Y+ ++ G 
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGL 544

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           CK+ ++     +   M E+    N  T   LI  +       EA+ L NA+
Sbjct: 545 CKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAI 594



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 166/332 (50%), Gaps = 27/332 (8%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+   + GK  ++    ++M ++GC PDVV  + +I    +  +   AVR+ + +E
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   Y+ALI G CKA +++ A ++L +++    +PD +TYNI+I  LC  G +E
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A   FD++L   CKP V TY ILI      G TD A  +LD+M          + +FV 
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM---------SSSRFV- 536

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
                        Y+ L+  L   GK E G  L  EM   G+  N  T + LI  LC+  
Sbjct: 537 -------------YSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKAN 582

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++AV +  A +++G+ P  Y+Y+ +ISA  K G+++        M +    PD V YN
Sbjct: 583 RVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYN 640

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
            +L         D+A   + +++  G  P VS
Sbjct: 641 ALLNGMIGANRMDRAHYYYLEMTGRGYVPPVS 672



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G + +V T + L+    R  +  +A ++L+        PD  +++ LI+ YC     + A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 319 IEFLDYMISD-GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
              +  M  D G  P +  +N +L   CK+G    A++ FE +     P + ++++ + +
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILIN 232

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G  I+A  +  E  + G   D  TY ++++ L ++  + EAV L+  + +    P
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           T+ +YN ++ G CK  R+ E+I++L  + + GC P+  TY  LI+G+G      EA +L 
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 498 NALVS 502
             + S
Sbjct: 353 KEMAS 357



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 6/276 (2%)

Query: 213 AFQFVRSLESR--GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           A++  + L S   G Q  V + N LL       +  E   L+   ++    P+V T+++L
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160

Query: 271 ISSLCRDGKTEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           I+  C   + E+A  V+R  +E  G+ P   +++ ++   CK G++  A++  + +    
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS- 219

Query: 330 CLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            +P     ++ ++    K G   QA  + ++ +  GC  ++ +Y  + + L  +     A
Sbjct: 220 -MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + ++ ++ + G  P   TYN+L++ LC+ G ++EA+ LL  +      P V++Y  +I G
Sbjct: 279 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 338

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             K +R  E+ ++   M  +G   +   Y  LI G+
Sbjct: 339 LGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 227/488 (46%), Gaps = 18/488 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+  E+   ++ M  +G KP+VV+   L+  F +E K+ +A  ++ E++    +P+  
Sbjct: 327 KGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI 386

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G CK  Q+  A+K+L+ +   G  PD  TY+ ++         + AF++ +++
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P   TY I+I      G++ +A  LL+EM                 G  K+G +
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A + + ++      PD+  YN L++ L  +G+ EE E+   ++  RGL P+  TYS L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I   C+    E A  +L+     GL P+A +Y  L+  Y K    +     L  M+  G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD   Y  ++    ++ N + A  +  ++   G  P++  Y+++ S L    D  +A+G
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ EM  +G+EP  + YN+LI   CR G +  A  +   + +    P  ++Y  +I G C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           K   I ++ ++   M ++G  P+   Y +L  G        +A+ L   + +        
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL 806

Query: 511 FKRLNRTF 518
           F  L R F
Sbjct: 807 FSTLVRGF 814



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 184/374 (49%), Gaps = 18/374 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N L+    +A+ +EL  K+   +   G  PDV TY+  + + C     ++A KVF+++ R
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
            +C    +TY ++I                   G+C+ G V +AF F   +   G  PD 
Sbjct: 274 RDCAMNEVTYNVMIS------------------GLCRSGAVEEAFGFKEEMVDYGLSPDA 315

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +Y  L+  L   G+ +E + L+ EM   GL+PNVV Y+ L+    ++GK  +A D+L  
Sbjct: 316 FTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNE 375

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               G+ P+   YD LI   CK G+L  A + L+ MI  G  PD   Y+ ++    ++ +
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A E+  ++ + G  PN  +Y  M + L  +G+   A  ++ EM+S+G++P+   Y  
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           LI    ++G +  A   L +M      P +  YN +I G     RI E+ E  A + ++G
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555

Query: 470 CKPNETTYVLLIEG 483
             P+E TY  LI G
Sbjct: 556 LVPDEFTYSGLIHG 569



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 238/513 (46%), Gaps = 55/513 (10%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + E  +  +I    R+G  +E+  F E MV  G  PD      L+    +  +  +A  +
Sbjct: 278 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKAL 337

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++ +   G +P+V  Y  L+ GF K  +   A  +L+ + S G  P+ + Y+ +I  LC 
Sbjct: 338 LDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK 397

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G +  A K+ +++++   +P   TY  L+Q        D A +LL+EM           
Sbjct: 398 IGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM----------- 446

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
                   + G  P+  +Y +++  L   G+ +E   L+ EMIS GL+PN   Y+ LI  
Sbjct: 447 -------RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             ++G    A + L    +  + PD + Y+ LI      GR++ A E+   +   G +PD
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY----------------NTMFS 377
              Y+ ++  +CK  N ++A ++ +++ + G  PN  +Y                +++  
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 378 ALWSSGDK---------IRALG----------MISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++  SGDK         IR L           +++E+   G+ PD   Y+SLIS LC+  
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +++AVGLL +M      P ++ YN +I GFC++  I+ +  V  ++  KG  PN  TY 
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYT 739

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            LI+G    G   +A +L   ++    I+ D F
Sbjct: 740 ALIDGNCKNGDITDAFDLYKDMLD-RGIAPDAF 771



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 225/507 (44%), Gaps = 54/507 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    + GK  E+   +  M++ G +P+ +M   LI+   +  +  +A +++  + 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD F Y+ L+ G  +    + A ++L+ +R+ G  P+  TY IMI  LC  G  +
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  + ++++ +  KP    Y  LI     EG    A + L+ M                
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLI 532

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+   G + +A ++   ++ RG  PD  +Y+ L+         E+ ++L+ +M++ GL+
Sbjct: 533 KGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592

Query: 262 PNVVTYS-----------------------------------ILISSLCRDGKTEDAVDV 286
           PN  TY+                                   I+I +L R    E A  V
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L   ++ GL PD + Y  LIS  CK   ++ A+  LD M  +G  P IV YN ++  FC+
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 712

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +G+  +A  +F+ +   G  PN  +Y  +      +GD   A  +  +ML +GI PD   
Sbjct: 713 SGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFV 772

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN L +  C D    E    L +    R    V  ++ ++ GFCK  R+ E+ ++L  M 
Sbjct: 773 YNVLATG-CSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMM 831

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEA 493
           ++   PN  T   +I   G  G   EA
Sbjct: 832 DREIVPNAQTVENVITEFGKAGKLCEA 858



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 182/402 (45%), Gaps = 19/402 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + L+  + K   +  A +V+  +   G +P     N ++  L     +E  +K+   +  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V TY+  ++A       D A K+ +EM                    R C  + 
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEM------------------RRRDCAMNE 280

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN+++  L   G  EE      EM+  GL P+  TY  L++ LC+ G+ ++A  +L  
Sbjct: 281 VTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDE 340

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
               GL P+   Y  L+  + K+G+   A + L+ MIS G  P+ + Y+ ++   CK G 
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
             +A ++  ++  VG  P+  +Y+ +    +   DK  A  +++EM + GI P+  TY  
Sbjct: 401 LGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGI 460

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I+ LC++G   EA  LL +M S   +P    Y  +I+G  K   I+ + E L  M +  
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
             P+   Y  LI+G+   G R E  E   A V    +  D F
Sbjct: 521 VLPDLFCYNSLIKGLSTVG-RIEEAEEYYAQVQKRGLVPDEF 561



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 167/439 (38%), Gaps = 102/439 (23%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G+  E+   +E M++ G KP+  M   LI    +E   + A   +E + K    PD+F Y
Sbjct: 469 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCY 528

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N+LI G     +IE A +   +++ RG  PD  TY+ +I   C    +E A ++  Q+L 
Sbjct: 529 NSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLN 588

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------------------- 202
              KP   TYT L++        +K   +L  M                           
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 648

Query: 203 -------------------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
                                    G+CK   + +A   +  +   G +P ++ YN L+ 
Sbjct: 649 AFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID 708

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
                G       +   ++++GL PN VTY+ LI   C++G   DA D+ +   ++G+ P
Sbjct: 709 GFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAP 768

Query: 298 DAYSYD----------------------------------PLISAYCKDGRLDLAIEFLD 323
           DA+ Y+                                   L+  +CK GRL    + L 
Sbjct: 769 DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLH 828

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+    +P+      ++  F K G   +A  +F +L                 A  SS 
Sbjct: 829 VMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK-------------KASQSST 875

Query: 384 DKIRALGMISEMLSKGIEP 402
           D+   L   ++M++KG+ P
Sbjct: 876 DRFSLL--FTDMINKGLIP 892



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 53/289 (18%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L++  F++   ++    ++SM+ +G KPD  +   +I+   +      A  V+  +E
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 657

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD+  Y++LISG CK   +E A  +LD +   G  P +V YN +I   C  G I 
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 717

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VFD +L     P  +TYT LI                   G CK G +  AF   +
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALID------------------GNCKNGDITDAFDLYK 759

Query: 219 SLESRGCQPDVISYNML----------------------------------LRTLLNMGK 244
            +  RG  PD   YN+L                                  +R     G+
Sbjct: 760 DMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGR 819

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            +E EKL+  M+ R + PN  T   +I+   + GK  +A  V    ++K
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 212/499 (42%), Gaps = 53/499 (10%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
           F+ GK  E+      M   G  P+VV    +I    + R  +KA  ++  +   G +PD 
Sbjct: 222 FKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YN LI G+    Q + A ++   + SRG  P+ VT +  +  LC  G IE A + FD 
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +L    K  +I+Y+ L+      G       L + M                 G  K GM
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           V +A      ++ RG  PDV++Y  ++     MG  ++       MI +G+EPN   Y  
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR--------------- 314
           LI   C  G    A +++   + KGL P   S+  LI+  CK+GR               
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521

Query: 315 --------------------LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
                               +  A    D M+S G  PDIV Y T++   CKNG  D  L
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGL 581

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +F +L   G  P   +Y  +   L+ +G    A  M  EM+  GI     TY+ L++ L
Sbjct: 582 ILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGL 641

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           CR+   +EA+ +   + +   +  ++  NI+I    K RR  E+  + A++ + G  P  
Sbjct: 642 CRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTV 701

Query: 475 TTYVLLIEGIGYGGWRAEA 493
            TY +++E +   G   EA
Sbjct: 702 QTYTIMMENLIKEGSVEEA 720



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 230/473 (48%), Gaps = 21/473 (4%)

Query: 50  AGKFDESL-YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP---D 105
           A + DE++      M   GC PD +  + ++K    + +S  A+ ++ +  K G     +
Sbjct: 151 AKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCN 210

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V  Y+ ++ G  K  ++  A  +   +  +G  P+VVTYN +I +LC    ++ A  +  
Sbjct: 211 VVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILR 270

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKG 208
           Q++ +  +P  +TY  LI      GQ  +A+++  EM                  +CK G
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
            + +A +F  S+ ++G + ++ISY+ LL      G   +   L   M+  G+ PN   ++
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           IL++   + G   +A+ +    +++GL PD  +Y  +I A+C+ G +D A++  ++MI  
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P+   Y  ++  FC +G+  +A E+  ++ + G  P + S+ ++ + L   G    A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   ++  G + D   + SLI   C  G + EA  +   M S    P +++Y  ++ G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            CK  RI++ + +   +  KG KP   TY ++++G+ + G  A A E+   ++
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 197/394 (50%), Gaps = 17/394 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V+ Y+ LI   C+A +++LA      L  +G   DV+  + ++  LC     + A  V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 164 -FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            F ++    C P  I+Y+ ++++   +G++  A+ +L  M + + G              
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL-RMAVKQGG-------------- 205

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC  +V+ Y+ ++  L   GK  E   L  EM  +G+ PNVVTY+ +I +LC+    + 
Sbjct: 206 -GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDK 264

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +LR     G+ PD  +Y+ LI  Y   G+   A+     M S G +P+ V  +T +A
Sbjct: 265 AQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVA 324

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
             CK+G  ++A E F+ +   G   N+ SY+T+     ++G  +    + + M+  GI P
Sbjct: 325 FLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP 384

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           ++  +N L++   + GMV EA+ +  DM+     P V++Y  +I  FC+   ++++++  
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M +KG +PN   Y  LI+G    G   +A EL
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 18/416 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ +E+  F +SM+A G K +++  + L+  +           +  ++ + G  P+  
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L++G+ K   +  A  + + ++ RG +PDV+TY  +I + C  G ++ A   F+ +
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P    Y  LIQ     G   KA +L+ E+                  +CK+G V
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A +    +   G + DV  +  L+     +GK  E  ++   M+S G+EP++VTY  L
Sbjct: 508 FEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++  C++G+ +D + + R    KG+ P  ++Y  ++      GR   A E    MI  G 
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
              I  Y+ +L   C+N   ++A+ +F+KL  +    ++   N M S ++ +  +  A G
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEG 687

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + + +   G+ P   TY  ++  L ++G V+EA G+   M  +   PT    N+I+
Sbjct: 688 LFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIV 743



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 202/446 (45%), Gaps = 34/446 (7%)

Query: 26  PNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE 85
           PN H+         F  L+    + G   E+++  E M   G  PDV+    +I  F + 
Sbjct: 384 PNQHV---------FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRM 434

Query: 86  RKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
              + A+ +   +++K  EP+   Y  LI GFC    +  A +++  +R++G  P ++++
Sbjct: 435 GSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
             +I  LC  G +  A ++FD ++R   K  V  +T LI                   G 
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLID------------------GY 536

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G + +AF+   ++ S G +PD+++Y  L+      G+ ++G  L  E++ +G++P  
Sbjct: 537 CLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTT 596

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY I++  L   G+T  A ++ +   E G+     +Y  L++  C++   + AI     
Sbjct: 597 FTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQK 656

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + +     DIV  N +++   K    ++A  +F  + D G  P V +Y  M   L   G 
Sbjct: 657 LCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGS 716

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL---VDMESTRFRPTVIS 441
              A G+ S ML  G+ P     N ++  L   G + +A G+    VD +S  F  +  S
Sbjct: 717 VEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA-GIYMCRVDGKSILFEASTAS 775

Query: 442 YNIIILGFCKTRRINESIEVLAAMFE 467
             ++ L  CK +   E + +L A ++
Sbjct: 776 M-LLSLFSCKGKH-REHLNLLPAKYQ 799



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P  Y+Y  LI   C+  RLDLA  F   ++  G   D++  +++L   C     D+A+++
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 357 -FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISC 413
            F ++ ++GC P+  SY+T+  ++   G    AL ++   + +G     + + Y++++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           L ++G V EA  L  +M      P V++YN +I   CK R ++++  +L  M   G +P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
             TY  LI G    G   +A+ +   + S   I
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVI 313


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 220/453 (48%), Gaps = 18/453 (3%)

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIEL 124
           +G KP VV  +  I    +      A+ ++  L    +P +  ++N +I GFCK  ++  
Sbjct: 350 SGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFE 409

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A +VL+ ++S G  PDV +Y+I+I + C +G +     + +++     KP++++YT LI 
Sbjct: 410 ALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIH 469

Query: 185 ATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQP 227
               +     A+ +   +G                  C +G +  A + +  +      P
Sbjct: 470 GLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVP 529

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              S   L+R    +G +++  ++   M+  G+ P+ +  + ++   CR G  ++A+ +L
Sbjct: 530 TAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLL 589

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +E G   + +SY+ +I   CK+G  + A+E L  M+    LP +VNY+T+++ F K 
Sbjct: 590 EDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQ 649

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
            N  +A+ +F ++  VG   N+++Y  + S    S     A G+  EM  +G+  D+I+Y
Sbjct: 650 SNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISY 709

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +LI   C +  + +A  L  +M      P VI+Y  II GFCK+ RI+ +  V   M  
Sbjct: 710 TTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNR 769

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
               P+  TY +LI+     G+  +A +L + +
Sbjct: 770 DSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVM 802



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 24/388 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS-----RGMI 157
           EPD+   N L+    +AN++E   +V + L+ RG SP++ TY IM+   CS      GM 
Sbjct: 279 EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMR 338

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
           ++A  +  ++ R   KPTV+TY+  I                   G+CK G V  A   +
Sbjct: 339 QAAV-ILGKIYRSGEKPTVVTYSTYIH------------------GLCKVGNVEAALMLI 379

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R+L       +  S+N ++      G+  E  +++ EM S G+ P+V +YSILI++ C  
Sbjct: 380 RNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGK 439

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G     +D++   +   + P   SY  LI   CK   L  A++    + +  C  D   Y
Sbjct: 440 GDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVY 499

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            T++  FC  G+ D A+++ E++      P   S  ++    +  G   +AL + + ML 
Sbjct: 500 ETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLR 559

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            GI PD I  N ++   CR G   EA+ LL D +   F     SYN II   CK      
Sbjct: 560 DGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPER 619

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           ++E+L  M ++   P+   Y  LI G  
Sbjct: 620 ALELLPRMLKRNVLPSVVNYSTLISGFA 647



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 200/432 (46%), Gaps = 23/432 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK----ANQ 121
           G +PD+  C  L+K   +  +     RV E L+  G  P+++ Y  +++ +C        
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           +  A  +L ++   G  P VVTY+  I  LC  G +E+A  +   L   N      ++  
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           +I                   G CK+G V +A Q +  ++S G  PDV SY++L+     
Sbjct: 397 VI------------------YGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCG 438

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G   +   LM EM    ++P++V+Y+ LI  LC+    ++AVD+  +        D+  
Sbjct: 439 KGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTV 498

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y+ LI  +C  G +D AI+ L+ MI +  +P   +  +++  + K G  DQALE+F  + 
Sbjct: 499 YETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAML 558

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  P+  + N +      +G    AL ++ +    G   +  +YN++I  LC++G  +
Sbjct: 559 RDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPE 618

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
            A+ LL  M      P+V++Y+ +I GF K      ++ +   M + G   N  TY +L+
Sbjct: 619 RALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILM 678

Query: 482 EGIGYGGWRAEA 493
               +     EA
Sbjct: 679 SIFSHSHKMHEA 690



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 198/421 (47%), Gaps = 18/421 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +I  F +  +  +A++V+E ++  G  PDV++Y+ LI+ FC    +     +++ +    
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P +V+Y  +I  LC + M+++A  +F  +   +CK     Y  LI    ++G  D A+
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           KLL+EM                 G  K G+  QA +   ++   G  PD I+ N +L   
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
              G ++E   L+ +    G   N  +Y+ +I  LC++G  E A+++L    ++ + P  
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSV 636

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y  LIS + K      A+     M+  G   +I  Y  +++ F  +    +A  IF++
Sbjct: 637 VNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKE 696

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           + + G   +  SY T+     ++ +  +A  +  EM  +G  P+ ITY  +I   C+   
Sbjct: 697 MKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNR 756

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +D A  +   M      P V++Y ++I  + K    +++ ++   M +KG  P++ T+ +
Sbjct: 757 IDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNV 816

Query: 480 L 480
           L
Sbjct: 817 L 817



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 6/333 (1%)

Query: 175 TVITYTILIQATMLEGQTDKAMKLL-DEMGMCKKGMVGQAFQFVRSLES-RGCQPDVISY 232
           ++  + I++ A  L G   +   LL D +G C +        F   L+S +  +   + +
Sbjct: 191 SISCFRIIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVERSGVVF 250

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           ++L+    +    E    + +     GLEP++ T + L+  L    + E    V    K+
Sbjct: 251 DVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKD 310

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIE----FLDYMISDGCLPDIVNYNTILAAFCKNG 348
           +G +P+ Y+Y  +++ YC D   D  +      L  +   G  P +V Y+T +   CK G
Sbjct: 311 RGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVG 370

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N + AL +   L     P N  S+N +       G+   AL ++ EM S GI PD  +Y+
Sbjct: 371 NVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYS 430

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            LI+  C  G V + + L+ +ME ++ +P+++SY  +I G CK   +  ++++  ++   
Sbjct: 431 ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            CK + T Y  LI+G    G    A++L   ++
Sbjct: 491 SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMI 523



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 19/299 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+  ++ G FD++L    +M+ +G  PD + C  ++    +     +A+ ++E  +++G
Sbjct: 537 LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHG 596

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              +  +YNA+I   CK    E A ++L R+  R   P VV Y+ +I     +   + A 
Sbjct: 597 FNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAV 656

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++++      + TYTIL+       +  +A  +  EM                  +
Sbjct: 657 NLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEM------------------K 698

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG   D ISY  L+    N  + ++   L  EM   G  PNV+TY+ +I   C+  + +
Sbjct: 699 ERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRID 758

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            A  V        + PD  +Y  LI  Y K G  D A +  D M   G LPD + +N +
Sbjct: 759 LATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 223/463 (48%), Gaps = 20/463 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           + G++  +   I+ M + G   DV      I    ++ +S K   +++ + +    P+  
Sbjct: 222 KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEI 281

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LISGF +  +IE+A KV D +      P+ +TYN +I   C+ G I  A ++ D +
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           +    +P  +TY  L+       +      +L+ M                 G+CK GM+
Sbjct: 342 VSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A Q +  +      PDV+++++L+     +GK    +++M +M   GL PN + YS L
Sbjct: 402 EEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTL 461

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + C+ G  ++A++        G   D ++ + L++ +C+ G+L+ A  F+++M   G 
Sbjct: 462 IYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGL 521

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+ V ++ I+  +  +G+A +A  +F+K++  G  P++ +Y  +   L   G    AL 
Sbjct: 522 DPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALK 581

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
               +       D + +N+ ++  CR G + +A+ L+ +M +  F P   +Y  +I G C
Sbjct: 582 FFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC 641

Query: 451 KTRRINESIEVLAAMFEKG-CKPNETTYVLLIEG-IGYGGWRA 491
           K  +I  ++ +     EKG   PN   Y  L++G + +G  RA
Sbjct: 642 KKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARA 684



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 196/381 (51%), Gaps = 27/381 (7%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           RG +P V T N+++GSL     ++  +  F  +L     P V T+ IL+ A         
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNA--------- 184

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                    +C++G    A   +R +E  G  P  ++YN LL      G+++   +L+  
Sbjct: 185 ---------LCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDC 235

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M S+G+  +V TY++ I +LCRD ++     +L+  +   + P+  +Y+ LIS + ++G+
Sbjct: 236 MASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGK 295

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +++A +  D M     LP+ + YNT++A  C  GN  +AL + + +   G  PN  +Y  
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGA 355

Query: 375 MFSALWSSGDKIRALGMISEMLSK----GIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           + + L+ + +     GM+S +L +    G+    I+Y ++I  LC++GM++EAV LL DM
Sbjct: 356 LLNGLYKNAE----FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDM 411

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                 P V++++++I GF +  +IN + E++  M++ G  PN   Y  LI      G+ 
Sbjct: 412 LKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYL 471

Query: 491 AEAMELANALVSMHAISRDTF 511
            EA+  A A+++      D F
Sbjct: 472 KEALN-AYAVMNHSGHVADHF 491



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 208/450 (46%), Gaps = 19/450 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D    F + M+A G  PDV     L+    +  K   A  ++  +E+ G  P    YN
Sbjct: 155 KVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYN 214

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L++ +CK  + + A++++D + S+G   DV TYN+ I +LC        + +  ++ R+
Sbjct: 215 TLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRN 274

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P  ITY  LI   + EG+ + A K+ DEM +         F  +         P+ I
Sbjct: 275 MVYPNEITYNTLISGFVREGKIEVATKVFDEMSL---------FNLL---------PNSI 316

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +YN L+      G   E  +LM  M+S GL PN VTY  L++ L ++ +      +L   
Sbjct: 317 TYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM 376

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +  G+     SY  +I   CK+G L+ A++ LD M+     PD+V ++ ++  F + G  
Sbjct: 377 RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKI 436

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           + A EI  K+   G  PN   Y+T+       G    AL   + M   G   D  T N L
Sbjct: 437 NNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVL 496

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           ++  CR G ++EA   +  M      P  ++++ II G+  +    ++  V   M   G 
Sbjct: 497 VATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGH 556

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            P+  TY  L++G+  GG   EA++  + L
Sbjct: 557 FPSLFTYGGLLKGLCIGGHINEALKFFHRL 586



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 193/437 (44%), Gaps = 19/437 (4%)

Query: 68  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELAN 126
           C  +  +   LI+   + R    AV+   ++   G  P V+  N ++    K  ++++  
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                + ++G  PDV T+NI++ +LC RG  ++A  +  ++      PT +TY  L+   
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLN-- 218

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                             CKKG    A Q +  + S+G   DV +YN+ +  L    +  
Sbjct: 219 ----------------WYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSA 262

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +G  L+  M    + PN +TY+ LIS   R+GK E A  V        L P++ +Y+ LI
Sbjct: 263 KGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLI 322

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           + +C  G +  A+  +D M+S G  P+ V Y  +L    KN        I E++   G  
Sbjct: 323 AGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVR 382

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            +  SY  M   L  +G    A+ ++ +ML   + PD +T++ LI+   R G ++ A  +
Sbjct: 383 VSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEI 442

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           +  M  T   P  I Y+ +I  +CK   + E++   A M   G   +  T  +L+     
Sbjct: 443 MCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCR 502

Query: 487 GGWRAEAMELANALVSM 503
            G   EA    N +  M
Sbjct: 503 YGKLEEAEYFMNHMSRM 519



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/563 (23%), Positives = 229/563 (40%), Gaps = 65/563 (11%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V    +  +I    + G  +E++  ++ M+     PDVV  + LI  FF+  K N A  +
Sbjct: 383 VSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEI 442

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           M  + K G  P+   Y+ LI  +CK   ++ A      +   G   D  T N+++ + C 
Sbjct: 443 MCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCR 502

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G +E A    + + R    P  +T+  +I      G   KA  + D+M           
Sbjct: 503 YGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFT 562

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C  G + +A +F   L       D + +N  L +    G   +   L+ EM+
Sbjct: 563 YGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMV 622

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRL 315
           +    P+  TY+ LI+ LC+ GK   A+ +   A EKG L+P+   Y  L+    K G  
Sbjct: 623 TNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHA 682

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A+   + M++    PD V +N I+  + + G   +  +I   +       N+++YN +
Sbjct: 683 RAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNIL 742

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL-------- 427
                      R   +  +M+  G  PD+ +++SLI   C+    D A+ +L        
Sbjct: 743 LHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGH 802

Query: 428 ------VDMESTRF---------------------RPTVISYNIIILGFCKTRRINESIE 460
                  +M  T+F                      P V +YN +  G  +T   +++  
Sbjct: 803 VIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHR 862

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL---------VSMHAISRD-- 509
           VL  + E G  P    Y+ LI G+   G    AM+L + +         V+M AI R   
Sbjct: 863 VLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLA 922

Query: 510 TFKRLNRTFPLLDVYKEISHLAT 532
             K++     +LD+  E+  + T
Sbjct: 923 NSKKIENAIWVLDLMLEMQIIPT 945



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/559 (21%), Positives = 223/559 (39%), Gaps = 95/559 (16%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
            R GK +E+ YF+  M   G  P+ V    +I  +     + KA  V + +  +G  P +F
Sbjct: 502  RYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLF 561

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             Y  L+ G C    I  A K   RLR    + D V +N  + S C  G +  A  + +++
Sbjct: 562  TYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEM 621

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGM 209
            + ++  P   TYT LI     +G+   A+ L  +                   G+ K G 
Sbjct: 622  VTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGH 681

Query: 210  VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
               A      + ++  +PD +++N+++      GK  +   +++ M S+ L  N+ TY+I
Sbjct: 682  ARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741

Query: 270  L-----------------------------------ISSLCRDGKTEDAVDVLRAAKEKG 294
            L                                   I   C+    + A+ +LR    +G
Sbjct: 742  LLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG 801

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
               D ++++ LI+ +C+   +  A E +  M     +P++  YN +     +  +  +A 
Sbjct: 802  HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAH 861

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSG---------DKIRALGMISE----------- 394
             + + L + G  P    Y T+ + +   G         D+++ LG+ S            
Sbjct: 862  RVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL 921

Query: 395  ---------------MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
                           ML   I P   T+ +L+   C++  V +A+ L   ME    +  V
Sbjct: 922  ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDV 981

Query: 440  ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            ++YN++I G C    I  + ++   M ++   PN + Y++LI+    G ++ E+ +L   
Sbjct: 982  VAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKL--- 1038

Query: 500  LVSMHAISRDTFKRLNRTF 518
               +  I      RLN+ F
Sbjct: 1039 ---LRDIQDRELMRLNQQF 1054


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 225/495 (45%), Gaps = 30/495 (6%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           G  ++ L  IE+    GC P+ V    LI  + +     + + ++  +E  G  P V  Y
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             L+S   +   +E    +L  +R R   P+V  YN +I +LC       A  V  Q+  
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
             C P  IT++ LI     EG+  +A +LL E                  G C +G V  
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +  RG  PDV+++  L+  L+  G+  E   +  +M +R L P+   Y++LIS
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+      A +++    E+ + PD Y Y  LI  + ++  LD A +  ++M   G  P
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+V YN ++  +C+ G  ++A+E    +  VG  P+  +Y T+       G+   AL ++
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+ +  +P+ + Y+SLI+  C+ G  D A  L   MES    P VI+Y I+I    K 
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFK 512
            ++  +      M    C PN+ T   L+ G            L N++ S+ +    +  
Sbjct: 693 DKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG------------LCNSMASIISSHCSSTV 740

Query: 513 RLNRTFPLLDVYKEI 527
            L+    LLD+++ +
Sbjct: 741 NLHGKGALLDIFRAL 755



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 211/457 (46%), Gaps = 40/457 (8%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           ++L  ++ M A GC PD +  + LI    QE +  +A R++    ++   P++ +Y +LI
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            GFC   ++ +A+ +L  +  RG +PDVVT+  +I  L   G +  A  V +++      
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLL 501

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P    Y +LI                   G+CKK M+  A   +  +  +   PD   Y 
Sbjct: 502 PDANIYNVLIS------------------GLCKKKMLPAARNLIEEMLEQNVHPDKYVYT 543

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L+   +     +E  K+   M  +G+ P+VV Y+ +I   C+ G   +AV+ +   ++ 
Sbjct: 544 TLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV 603

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD ++Y  LI  Y K G +  A+  L  M+   C P++V Y++++  +CK G+ D A
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA 663

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +F  +   G  PNV +Y  +  +L+     +RA      ML     P++ T +SL++ 
Sbjct: 664 ECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG 723

Query: 414 LCRDGMVD------------EAVGLLVD----MESTRFRPTVISYNIIILGFCKTRRINE 457
           LC + M                 G L+D    + + R  P   +YN II   C    + E
Sbjct: 724 LC-NSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGE 782

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGG----WR 490
           ++++   M  KG KP+  T++ L+ G    G    WR
Sbjct: 783 ALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWR 819



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 187/401 (46%), Gaps = 18/401 (4%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+L +    D ++   ++ G C    +E   K+++     G  P+ V YN++I   C RG
Sbjct: 249 EMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRG 308

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +     +  ++      PTV+TY  L+     +G  +K   LL EM             
Sbjct: 309 DVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEM------------- 355

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                  R   P+V  YN ++  L       +   ++ +M + G +P+ +T+S LIS LC
Sbjct: 356 -----RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLC 410

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           ++G+ ++A  +LR      L P+  SY  LI  +C  G + +A   L  M+  G  PD+V
Sbjct: 411 QEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +  ++      G   +AL + EK++     P+ + YN + S L        A  +I EM
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           L + + PD+  Y +LI    R+  +DEA  +   ME     P V+ YN +I G+C+   +
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           NE++E ++ M + G  P+E TY  LI G    G  + A+ L
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 17/309 (5%)

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           D A KL DEM                 G+C +G+V +  + + +    GC P+ + YN+L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +      G    G  L+ EM ++GL P VVTY  L+S L R G  E    +L   +E+ L
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P+   Y+ +I A CK      A+  L  M + GC PD + ++T+++  C+ G   +A  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  + +     PN+SSY ++       G+ I A  ++ EM+ +G  PD +T+ +LI  L 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G V EA+ +   M + +  P    YN++I G CK + +  +  ++  M E+   P++ 
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 476 TYVLLIEGI 484
            Y  LI+G 
Sbjct: 541 VYTTLIDGF 549



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 1/288 (0%)

Query: 208 GMVGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           GM  +A +   R+ E  G  P     N LLR L+   +W++  KL  EM++     +  +
Sbjct: 202 GMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYS 261

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
             +++  LC +G  E  + ++ A    G  P+A  Y+ LI  YC+ G +   I  L  M 
Sbjct: 262 TCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEME 321

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           + G LP +V Y T+++   + G+ ++   +  ++ +   PPNV  YN++  AL       
Sbjct: 322 AKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSAS 381

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           +AL ++ +M + G +PD IT+++LIS LC++G V EA  LL +       P + SY  +I
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
            GFC    +  +  +L  M E+G  P+  T+  LI G+   G  +EA+
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 4/269 (1%)

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS---ILISSLCRDGKTEDAVDVLR 288
           ++ LLR L   G+++  +  + +M   G    V T +    L+++    G    A ++ +
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 289 AAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            A+E  G  P A   + L+    +  R D A +  D M+++    D  +   ++   C  
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  ++ L++ E     GC PN   YN +       GD  R + ++ EM +KG+ P  +TY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            +L+S L R G +++   LL +M   R  P V  YN +I   CK R  ++++ VL  MF 
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            GC P+  T+  LI G+   G   EA  L
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERL 421



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 112/281 (39%), Gaps = 33/281 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R    DE+    E M   G  PDVV    +IK + Q    N+AV  M  + 
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD F Y  LI G+ K   I  A  +L  +  R   P+VV Y+ +I   C  G  +
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A  +F  +      P VITYTILI +   + +  +A    + M                
Sbjct: 662 AAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721

Query: 203 -GMCKKGMV---------------GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
            G+C                    G      R+L +  C P   +YN ++ +L       
Sbjct: 722 TGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLG 781

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           E   L  +M ++G +P+  T+  L+   C  GK+ +   +L
Sbjct: 782 EALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 223/467 (47%), Gaps = 32/467 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    RAGKFD  +   + MV +GC+   +   + I    +           +++EKY 
Sbjct: 161 LLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNC-------CFDLVEKYY 213

Query: 103 EPDV--------FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
              +        F Y+  IS  C++N+IEL  ++L  +   GFSPD+   NI I  LC +
Sbjct: 214 GMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQ 273

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
             +  A ++ +++      P V+TYT ++       +  +A+ L +EM            
Sbjct: 274 NRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVAC 333

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G+CK   V +AF+    + S   +  V  YN L+      G  ++   +++ M +
Sbjct: 334 GALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRT 393

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G EP VVTY+IL++  C  G  E A +++   +  G+ PD YSY+ L+   CK  +LD 
Sbjct: 394 NGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDK 453

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A  F+   +  G   DIV+ N ++ AFCK      ALE+F+++   G   +  +Y T+ +
Sbjct: 454 AFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLIN 513

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L+S G    A  +  +ML   I+P+   YN ++  LC+ G +  A  + + M      P
Sbjct: 514 GLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILP 573

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +++YN +I    K  R  E++++   M  KG +P+  T+  LI G+
Sbjct: 574 DIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGL 620



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 179/384 (46%), Gaps = 18/384 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +  +  ++L  +E M   G  PDVV  T ++      ++ ++AV + E + K G +PDV 
Sbjct: 272 KQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVV 331

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A  ALI G CK +++E A ++  R+ S      V  YN +I      G I+ A+ +   +
Sbjct: 332 ACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFM 391

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             + C+P V+TY IL+      G  +KA  L+ +M                 G+CK   +
Sbjct: 392 RTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQL 451

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF FV      G   D++S N+L+     + K +   +L  EM  +G++ + VTY  L
Sbjct: 452 DKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTL 511

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+ L   G    A ++     +  + P+   Y+ ++   CK G L  A +   +MI    
Sbjct: 512 INGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEI 571

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LPDIV YNT++    KN  A +AL++F+ +   G  P+  ++  + + L   G    A  
Sbjct: 572 LPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYE 631

Query: 391 MISEMLSKGIEPDEITYNSLISCL 414
           +   M+  GI  D      LIS L
Sbjct: 632 VWEYMMENGIILDREVSERLISVL 655



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 202/451 (44%), Gaps = 43/451 (9%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           FA   ++S         L ++ L  +RS+G +     Y I++      G  +S    FD+
Sbjct: 121 FAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDE 180

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-KKGMVGQAFQFVRSLESRGC 225
           ++   C+   I Y   I   +     D   K     GM   KG+    F + R + +  C
Sbjct: 181 MVMSGCREFGIDYNRYIGVLIKNCCFDLVEKY---YGMALSKGLCLTPFTYSRWISAL-C 236

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           Q + I               E  E+L+ +M   G  P++   +I I  LC+  +  DA+ 
Sbjct: 237 QSNRI---------------ELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQ 281

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           ++   + KG  PD  +Y  ++   C + R   A+   + M+  G  PD+V    ++   C
Sbjct: 282 MVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC 341

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           KN   ++A E+  ++  +    +VS YN + S  W +G   +A  +IS M + G EP  +
Sbjct: 342 KNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVV 401

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN L++  C  GM+++A  L+  ME++   P   SYN ++ G CKT +++++   ++  
Sbjct: 402 TYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDH 461

Query: 466 FEKG---------------CKPNETTYVL-LIEGIGYGGWRAEAM---ELANALVSM--H 504
            E G               CK  +    L L + + Y G +A+A+    L N L S+  +
Sbjct: 462 MEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYY 521

Query: 505 AISRDTFKRLNRTF--PLLDVYKEISHLATK 533
            ++ + F+++ +    P +++Y  + H   K
Sbjct: 522 NLAEELFEQMLKAQIDPNVNLYNIMLHHLCK 552



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 27/329 (8%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C N K  E   ++S   +      L+ ++  + +  LI   +RAG  D++   I  M  N
Sbjct: 341 CKNSKVEEAFELASRMLS------LNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTN 394

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+P VV    L+  +       KA  ++  +E  G  PD ++YN L+ G CK +Q++ A
Sbjct: 395 GCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 454

Query: 126 NK-VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
              V D +   GF  D+V+ NI+I + C    ++SA ++F ++     +   +TY  LI 
Sbjct: 455 FAFVSDHMEVGGFC-DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLIN 513

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                G  + A +L ++M                 L+++   P+V  YN++L  L  +G 
Sbjct: 514 GLFSVGYYNLAEELFEQM-----------------LKAQ-IDPNVNLYNIMLHHLCKVGD 555

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            +  +K+   MI + + P++VTY+ LI  L ++ +  +A+D+ +  + KG+ PD+ ++  
Sbjct: 556 LKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKY 615

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LI+    +GR  LA E  +YM+ +G + D
Sbjct: 616 LINGLLDEGRSTLAYEVWEYMMENGIILD 644



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 39/280 (13%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G + +    + ++S L  DG      + L   + +G+      Y  L+S Y + G+ D  
Sbjct: 115 GFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSV 174

Query: 319 IEFLDYMISDGCLPDIVNYNTI-----------------------------------LAA 343
           I   D M+  GC    ++YN                                     ++A
Sbjct: 175 IGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISA 234

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C++   +   E+   +   G  P++ + N     L        AL M+ +M  KG  PD
Sbjct: 235 LCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPD 294

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY +++ CLC +    EAVGL  +M     +P V++   +I G CK  ++ E+ E+ +
Sbjct: 295 VVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELAS 354

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            M     + + + Y  LI G     WRA +++ A  ++S 
Sbjct: 355 RMLSLNIELSVSIYNALISGF----WRAGSIDKAYTIISF 390



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 7/228 (3%)

Query: 280 TEDAVDVLRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +E AV     A+ + G     ++   ++S    DG   L  EFL  + S G       Y 
Sbjct: 100 SETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYR 159

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKI-RALGMISEM 395
            +L+ + + G  D  +  F+++   GC      YN     L  +   D + +  GM    
Sbjct: 160 ILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGM---A 216

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           LSKG+     TY+  IS LC+   ++    LL DM+   F P + + NI I   CK  R+
Sbjct: 217 LSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRL 276

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           +++++++  M  KG  P+  TY  ++  +      +EA+ L   +V M
Sbjct: 277 HDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKM 324


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 199/435 (45%), Gaps = 19/435 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F + +  F  +I    R G  + ++  ++SM  +  K        LI    +     KA 
Sbjct: 270 FSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAE 328

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +   +E  G  P V  YNA+I G  K  Q E A      +R+ G  PDV+TYN ++   
Sbjct: 329 ALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRY 388

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A  +   L R    PTV+TY  LI      G   +A +L +EM         
Sbjct: 389 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDV 448

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G  K   +  A +F   + S+G QPD  +YN  +   L +       +L   
Sbjct: 449 CTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREV 508

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ +G+ P+ VTY+++I  LC+ G  +DA  +       GL PD  +Y  LI A+C+ G 
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGL 568

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A + L+ M+SDG  P +V Y  ++   C+ GN   A   F K+ DVG  PN  +YN 
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +  AL  +G    A     EML +G+ P++ TY  LI   CR+G   +A+ L  +M    
Sbjct: 629 LIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 688

Query: 435 FRPTVISYNIIILGF 449
             P   ++N +  GF
Sbjct: 689 IPPDYCTHNALFKGF 703



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 224/489 (45%), Gaps = 25/489 (5%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H ++ DV++   +  + R   A ++D+       M+    +P +V    L+  F +E + 
Sbjct: 196 HGVAPDVRDCNRVLRVLRD--AARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRK 253

Query: 89  NKAVRVMEILEKYG---EPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTY 144
           ++A  +++ +E  G     +   +N +IS   +   +E A K++D +R S+  S    TY
Sbjct: 254 DEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS--FTY 311

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD---------KA 195
           N +I +L  RG +  A  +  ++  +   PTV+TY  +I   +   Q +         +A
Sbjct: 312 NPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRA 371

Query: 196 MKLLDEM--------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           M LL ++          CK G + +A   +  L   G  P V++YN L+     +G   E
Sbjct: 372 MGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAE 431

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EM+ +G  P+V TY+IL++   +      A +       KGL PD ++Y+  I 
Sbjct: 432 ARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRIC 491

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           A        +A +  + M+  G  PD V YN I+   CK GN   A  +  K+   G  P
Sbjct: 492 AELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP 551

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           +  +Y  +  A    G    A  +++ M+S G++P  +TY  L+   CR G +  A G  
Sbjct: 552 DCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWF 611

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
             M      P  I+YN++I   C T R   +      M E+G  PN+ TY LLI+G    
Sbjct: 612 RKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCRE 671

Query: 488 GWRAEAMEL 496
           G  A+A+ L
Sbjct: 672 GNWADAIRL 680



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 184/391 (47%), Gaps = 28/391 (7%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G +PDV   N ++  L      +    V+ ++L+   +PT++TY  L+ + + EG+ D+
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDE 255

Query: 195 AMKLLDEMG-------------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           A  LL EM                    + ++G +  A + V S+     +    +YN L
Sbjct: 256 ASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPL 314

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +  LL  G   + E L  EM + G+ P VVTY+ +I  L +  + E A       +  GL
Sbjct: 315 ITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGL 374

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            PD  +Y+ L++ YCK G L  A+  L  +   G  P ++ YNT++  +C+ G+  +A  
Sbjct: 375 LPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM----ISEMLSKGIEPDEITYNSLI 411
           + E++ + GC P+V +Y    + L +   K+R L M      EMLSKG++PD   YN+ I
Sbjct: 435 LKEEMVEQGCFPDVCTY----TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
                      A  L   M      P  ++YN+II G CKT  + ++  +   M   G +
Sbjct: 491 CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQ 550

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY  LI      G   EA +L N +VS
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLNGMVS 581



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 144/269 (53%), Gaps = 5/269 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R +   G  PDV   N +LR L +  +W++   +  EM+   +EP +VTY+ L+ S  ++
Sbjct: 191 RLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKE 250

Query: 278 GKTEDAVDVLRAAKEK--GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDGCLPDI 334
           G+ ++A  +L+  + +  G + +  +++ +IS   ++G L+ A++ +D M +S       
Sbjct: 251 GRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA--SS 308

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             YN ++ A  + G   +A  +  ++ + G  P V +YN +   L        A    +E
Sbjct: 309 FTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M + G+ PD ITYNSL++  C+ G + EA+ LL D+      PTV++YN +I G+C+   
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + E+  +   M E+GC P+  TY +L+ G
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNG 457



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLI 411
           L  F  ++  G  P+V   N +   L  +   D +RA+    EML   +EP  +TYN+L+
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAV--YGEMLQLRVEPTIVTYNTLL 244

Query: 412 SCLCRDGMVDEAVGLLVDMEST--RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
               ++G  DEA  LL +ME+    F    +++N++I    +   +  +++++ +M    
Sbjct: 245 DSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLS 303

Query: 470 CKPNETTYVLLIEGIGYGGW--RAEAMEL 496
            K +  TY  LI  +   G+  +AEA+++
Sbjct: 304 KKASSFTYNPLITALLERGFVRKAEALQM 332


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 240/486 (49%), Gaps = 55/486 (11%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP----- 104
            G++ E++  +E MVA G  P+++     I    + R+  +A+ ++E + + G P     
Sbjct: 195 GGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRT 254

Query: 105 -------------------------------DVFAYNALISGFCKANQIELANKVLDRLR 133
                                          DV +Y+++I+   +  + + A  +L+++R
Sbjct: 255 YNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMR 314

Query: 134 SRGFSPDVVTYNIMIGSLCSRG-MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
           ++G SP+V++YN  I + C++G   + A  +  ++      PTVI+Y     A  + G+ 
Sbjct: 315 TQGVSPNVISYNSAIDA-CAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRW 373

Query: 193 DKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
            +A++LL EM                    K G   +A + +R + + G  PD+IS+N  
Sbjct: 374 VEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSA 433

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           +       +WE   +L+ EM + GL PNV+TY+  I +  R  + ++A+ + R    +GL
Sbjct: 434 IDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGL 493

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +P+  +Y+ +I A  K  + +LA++ L  M + G  PD+++YN+ + A  K    + AL+
Sbjct: 494 SPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ 553

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           + + +   G  P++ SYN+  +A   SG    ALG++ +M + G+ P+ ++Y + I    
Sbjct: 554 LLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACG 613

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +    D AV +L +M++    P +I+Y+  I    K  R  E++++L  +  +G  P+  
Sbjct: 614 KGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQ 673

Query: 476 TYVLLI 481
           TY+ +I
Sbjct: 674 TYLTVI 679



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 223/460 (48%), Gaps = 22/460 (4%)

Query: 49  RAGKFDESLYFIESMVA--NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPD 105
           + G++ E++  +  MVA   G  PDVV     I       +  +A+ ++E +   G  P+
Sbjct: 157 KGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPN 216

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +  YN+ I    K  + E A  +L+ +  +GF P   TYN +I +    G    A  +  
Sbjct: 217 LITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLG 276

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKG- 208
           Q+L ++    VI+Y+ +I A     +  +AM LL++M                  C KG 
Sbjct: 277 QMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGD 336

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
              +A   +R + + G  P VISYN         G+W E  +L+ EM ++G+ PN ++Y+
Sbjct: 337 RWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYN 396

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
             + +  + G+ E AV +LR     G  PD  S++  I A  +  + + A+E L  M + 
Sbjct: 397 SALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTA 456

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR- 387
           G  P+++ YN+ + A  ++    +A+ +F ++   G  PNV +YN+M  A  + G++   
Sbjct: 457 GLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDAC-AKGEQWEL 515

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ +++ M ++G+ PD I+YNS I    +    + A+ LL  M +   +P +ISYN  + 
Sbjct: 516 AVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
              K+ R  E++ +L  M   G  PN  +Y   I   G G
Sbjct: 576 ACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKG 615



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 205/435 (47%), Gaps = 18/435 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  +I    + G++ E++  +  M+ N    DV+  + +I    + R+  +A+
Sbjct: 248 FPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAM 307

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            ++E +   G  P+V +YN+ I    K ++ + A  +L  + + G  P V++YN    + 
Sbjct: 308 DLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAAC 367

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------- 204
              G    A ++  ++      P  I+Y   + A    GQ +KA+KLL  M         
Sbjct: 368 AVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDI 427

Query: 205 ---------CKKGMVGQ-AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                    C +G   + A + +R + + G  P+VI+YN  +       +W+E   L  E
Sbjct: 428 ISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFRE 487

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M +RGL PNVVTY+ +I +  +  + E AV +L     +G+ PD  SY+  I A  K  +
Sbjct: 488 MPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQ 547

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            +LA++ L  M + G  PDI++YN+ + A  K+G   +AL + + ++ VG  PN  SY  
Sbjct: 548 WELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGA 607

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
              A         A+ ++ EM + G  P+ ITY++ I    + G   EAV LL D+    
Sbjct: 608 AIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQG 667

Query: 435 FRPTVISYNIIILGF 449
             P   +Y  +I  F
Sbjct: 668 LTPDAQTYLTVISAF 682



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 204/424 (48%), Gaps = 24/424 (5%)

Query: 79  IKKFFQERKSNKAVRVMEILEKY----GEPDVFAYNALISGFCKANQIELANKVLDRLRS 134
           +K    E K       +  L+++    G  D  +YN  I+      Q   A ++L  + +
Sbjct: 79  LKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPT 138

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL--RDNCKPTVITYTILIQATMLEGQT 192
            G +PDVVTYN  I +    G  + A  +  Q++   +   P V+TY   I A    G+ 
Sbjct: 139 EGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRW 198

Query: 193 DKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
            +AM LL++M                   ++G  P++I+YN  +       +WEE   L+
Sbjct: 199 KEAMDLLEQM------------------VAQGVPPNLITYNSAIGACAKGRRWEEAMDLL 240

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            E+I +G  P+  TY+ +I +  + G+  +A+D+L       +  D  SY  +I+A  + 
Sbjct: 241 EEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRG 300

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
            R   A++ L+ M + G  P++++YN+ + A  K     +AL++  +++ VG  P V SY
Sbjct: 301 RRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISY 360

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N+  +A   +G  + AL ++ EM ++GI P+ I+YNS +    + G  ++AV LL  M +
Sbjct: 361 NSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMST 420

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P +IS+N  I    + ++   ++E+L  M   G  PN  TY   IE  G      E
Sbjct: 421 VGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQE 480

Query: 493 AMEL 496
           AM L
Sbjct: 481 AMGL 484



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 174/367 (47%), Gaps = 21/367 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           ++ E+L  +  M   G  P V+             +  +A+ +++ +   G  P+  +YN
Sbjct: 337 RWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYN 396

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM-IESAFKVFDQLLR 169
           + +    K  Q E A K+L  + + G  PD++++N  I + C RG   E+A ++  ++  
Sbjct: 397 SALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDA-CGRGQQWETAVELLREMPT 455

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P VITY   I+A     +  +AM L  EM                   +RG  P+V
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREM------------------PTRGLSPNV 497

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           ++YN ++       +WE   +L+T M +RG+ P+V++Y+  I +  +  + E A+ +L+ 
Sbjct: 498 VTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKG 557

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              +G  PD  SY+  ++A  K GR   A+  L  M + G  P+ V+Y   + A  K   
Sbjct: 558 MPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQ 617

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D A+ I +++   G  PN+ +Y+    A    G    A+ +++++  +G+ PD  TY +
Sbjct: 618 WDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLT 677

Query: 410 LISCLCR 416
           +IS   R
Sbjct: 678 VISAFQR 684


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 193/378 (51%), Gaps = 17/378 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P + A N ++ G  K  + +   KV   + +RG SP+VVTY  +I   C +G    AF++
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
           FD+++     PTV+ YTILI+    E +  +A  +   M                 G CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
              V +A +  + +   G  P+V+++ +L+  L    +     K + +M S G+ PN+  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ LI   C+ G   +A+ +    ++  + PD ++Y  LI   C   R++ A   L  M 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G LP+ V YNT++  +CK GN ++A+E+  ++++ G  PN+ +++T+      +G   
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+G+ +EM+ KG+ PD + Y +LI    +DG   EA  L  +M+     P V + + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 447 LGFCKTRRINESIEVLAA 464
            G CK  RI+++I++  A
Sbjct: 516 DGLCKDGRISDAIKLFLA 533



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 191/386 (49%), Gaps = 19/386 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+FD        MVA G  P+VV    LI    ++    KA R+  E++EK   P V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G C  ++I  A  +   +R+ G  P++ TYN M+   C    ++ A +++ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L D   P V+T+ ILI                   G+CK   +  A +F+  + S G  P
Sbjct: 290 LGDGLLPNVVTFGILID------------------GLCKTDEMVSARKFLIDMASFGVVP 331

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++  YN L+      G   E   L +E+    + P+V TYSILI  LC   + E+A  +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  K+KG  P+A +Y+ LI  YCK+G ++ AIE    M   G  P+I+ ++T++  +CK 
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G  + A+ ++ ++   G  P+V +Y  +    +  G+   A  +  EM   G+ P+  T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 408 NSLISCLCRDGMVDEAVGLLVDMEST 433
           + LI  LC+DG + +A+ L +    T
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGT 537



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 23/374 (6%)

Query: 128 VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 187
           VL RL S  F+P+V  + ++I +    G++E A  V+ ++   +  P        +QA  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPA-------MQACN 162

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
           +         +LD  G+ KKG     ++    + +RG  P+V++Y  L+      G + +
Sbjct: 163 M---------VLD--GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EMI + + P VV Y+ILI  LC + +  +A  + R  +  G+ P+ Y+Y+ ++ 
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
            YCK   +  A+E    M+ DG LP++V +  ++   CK      A +    ++  G  P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           N+  YN +      +G+   AL + SE+    I PD  TY+ LI  LC    ++EA GLL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M+   F P  ++YN +I G+CK   + ++IEV + M EKG +PN  T+  LI+G    
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 488 GWRAEAMELANALV 501
           G    AM L   +V
Sbjct: 452 GKMEAAMGLYTEMV 465



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 115/512 (22%), Positives = 210/512 (41%), Gaps = 91/512 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AG   E+L     +  +   PDV   + LIK      +  +A  +++ ++K G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   YN LI G+CK   +E A +V  ++  +G  P+++T++ +I   C  G +E+A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            ++ +++     P V+ YT LI     +G T +A +L  EM                  +
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM------------------Q 500

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLM---TEMISRGLEPNVVTYSI-----LISS 273
             G  P+V + + L+  L   G+  +  KL    T   + G + N +  S+     L  S
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALS 560

Query: 274 LCRDGKTEDAVDVLRAAK--EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           L R G +E  + V+R  K       P A+ +  L                          
Sbjct: 561 LFR-GISEPCICVIRVTKLFATNNQPKAHLHTHLKPP----------------------- 596

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS----ALWSS---GD 384
                 N  L  + ++ N  + L  F  L     P ++ S++ MF+     L SS   G 
Sbjct: 597 ----KSNQTLKRYLQSSNTSKVLLFFRILLRKN-PSSIDSFSLMFALKACTLKSSLVEGK 651

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
           ++ AL     +++ G EP      SLIS     G V +A  +  ++ S      +IS+  
Sbjct: 652 QMHAL-----VINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTS 702

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE------GIGYGGW-----RAEA 493
           +I  +   +R N+++++   M     +P+  T  + +        +  G W     R   
Sbjct: 703 VISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRG 762

Query: 494 ME----LANALVSMHAISRD--TFKRLNRTFP 519
           ++    L N+L++M++   +  T +R +   P
Sbjct: 763 LDTDLCLNNSLINMYSKCGEIGTARRFSLVLP 794



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 189/473 (39%), Gaps = 35/473 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    +AGK + ++     MV  G  PDVV  T LI   F++  + +A R+ + ++
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVL------DRLRSRGFSPDVVTYNIMIGSLC 152
           + G  P+VF  + LI G CK  +I  A K+       D   S+    D   Y +   +L 
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALS 560

Query: 153 -SRGMIESAFKVF--DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             RG+ E    V    +L   N +P    +T L        +  K+ + L      +   
Sbjct: 561 LFRGISEPCICVIRVTKLFATNNQPKAHLHTHL--------KPPKSNQTLKRY--LQSSN 610

Query: 210 VGQAFQFVRSLESRGCQP-DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
             +   F R L  +     D  S    L+         EG+++   +I+ G EP +   +
Sbjct: 611 TSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQT 670

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LIS     G   DA ++      K L     S+  +ISAY  + R + A++    M  D
Sbjct: 671 SLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRPNKALQLFRQMQMD 726

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              PDIV     L+A    G  D    I   +   G   ++   N++ + ++S   +I  
Sbjct: 727 DVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN-MYSKCGEIGT 785

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIIL 447
               S +L     P+++T+  ++      G+V+E       M E    RP +  +  ++ 
Sbjct: 786 ARRFSLVL-----PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVD 840

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             C+   + E+ E +  M     +PN   +  L+      G   + M + N +
Sbjct: 841 LLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKMLVRNQI 890



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/323 (20%), Positives = 130/323 (40%), Gaps = 62/323 (19%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYGEPDVFAYN---ALISGFCKANQIELANKVLDRLRSR 135
           +K++ Q   ++K +    IL +     + +++   AL +   K++ +E   ++   + + 
Sbjct: 602 LKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVE-GKQMHALVINF 660

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF P +     +I    + G +  A  +FD++   N    +I++T +I A +   + +KA
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKA 716

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           ++L  +M M                     QPD+++  + L    ++G  + GE +   +
Sbjct: 717 LQLFRQMQM------------------DDVQPDIVTVTVALSACADLGALDMGEWIHAYI 758

Query: 256 ISRGLE-----------------------------PNVVTYSILISSLCRDGKTEDAVDV 286
             RGL+                             PN VT+  ++ +    G  E+    
Sbjct: 759 RHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQH 818

Query: 287 LRAAKEK-GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
            R+ KE   L P    +  ++   C+ G L  A EF+  M      P+ V + T+L A  
Sbjct: 819 FRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACS 875

Query: 346 KNGNADQALEIFEKLS---DVGC 365
             G  D+ + +  ++    D GC
Sbjct: 876 LQGMWDKKMLVRNQIKQRRDPGC 898


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 224/482 (46%), Gaps = 19/482 (3%)

Query: 1   QSTVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFI 60
           QS ++  I+ K   +   SSS      T   + + K   +  +I    ++   D S+ + 
Sbjct: 59  QSLLLQVISGKIQSQFFTSSSL-LHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYF 117

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKAN 120
             MV  G  P       L+         N+  R     +   + DV+++  +I G C+A 
Sbjct: 118 NEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAG 177

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           +IE +  +L  LR  GFSP+VV Y  +I   C RG IE A  +F ++ +        TYT
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           +LI                   G+ K G+  Q F+    ++  G  P++ +YN ++    
Sbjct: 238 VLIH------------------GLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHC 279

Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
             G+ ++  KL  EM  RG+  N+VTY+ LI  LCR+ K  +A  V+   K  G+ P+  
Sbjct: 280 KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLI 339

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y+ LI  +C  G+L  A+     + S G  P +V YN +++ FCK G+   A ++ +++
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
            + G  P+  +Y  +        +  +A+ + S M   G+ PD  TY+ LI   C  G +
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA  L   M + +  P  + YN ++LG+CK      ++ +   M EK   PN  +Y  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 481 IE 482
           IE
Sbjct: 520 IE 521



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 192/394 (48%), Gaps = 19/394 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +I+ + ++  ++ +    + +  +GF P    +N ++  +         ++ F++  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES- 155

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +      V ++ I+I+                  G C+ G + ++F  +  L   G  P+
Sbjct: 156 KIKVDLDVYSFGIVIK------------------GCCEAGEIEKSFDLLVELREFGFSPN 197

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V+ Y  L+      G+ E+ + L  EM   GL  N  TY++LI  L ++G  +   ++  
Sbjct: 198 VVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +E G+ P+ Y+Y+ +++ +CKDGR   A +  D M   G   +IV YNT++   C+  
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
            A++A ++ +++   G  PN+ +YNT+       G   +AL +  ++ S+G+ P  +TYN
Sbjct: 318 KANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            L+S  C+ G    A  ++ +ME    +P+ I+Y I+I  F +   + ++I++ + M E 
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           G  P+  TY +LI G    G   EA  L   +V+
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 18/321 (5%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRS 134
           T LI   F+     +   + E +++ G  P+++ YN +++  CK  + + A K+ D +R 
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRE 296

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           RG S ++VTYN +IG LC       A KV DQ+  D   P +ITY  LI      G+  K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A+ L  ++                 G CKKG    A + V+ +E RG +P  I+Y +L+ 
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILID 416

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
           T   M   E+  +L + M   GL P+V TYS+LI   C  G+  +A  + +    K L P
Sbjct: 417 TFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEP 476

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +   Y+ ++  YCK+G    A+     M      P++ +Y  ++   CK   + +A  + 
Sbjct: 477 NKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536

Query: 358 EKLSDVGCPPNVSSYNTMFSA 378
           EK+ D G  P+ S  N +  A
Sbjct: 537 EKMIDTGIDPSDSILNLISRA 557



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 127/312 (40%), Gaps = 54/312 (17%)

Query: 245 WEEGEKLMTEMISRGLEPNVVT--------------------YSILISSLCRDGKTEDAV 284
           +   + L+ ++IS  ++    T                    Y ++I++  +    + ++
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSI 114

Query: 285 DVLRAAKEKGLTP----------------------------------DAYSYDPLISAYC 310
                  +KG  P                                  D YS+  +I   C
Sbjct: 115 SYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCC 174

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G ++ + + L  +   G  P++V Y T++   CK G  ++A ++F ++   G   N  
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEW 234

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y  +   L+ +G K +   M  +M   G+ P+  TYN +++  C+DG   +A  L  +M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                   +++YN +I G C+  + NE+ +V+  M   G  PN  TY  LI+G    G  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKL 354

Query: 491 AEAMELANALVS 502
            +A+ L   L S
Sbjct: 355 GKALSLCRDLKS 366


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 227/463 (49%), Gaps = 27/463 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L+K   + G+F++    +  M   G  PD +    LI    +      A+ V  E+ E+ 
Sbjct: 154 LMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERG 213

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESA 160
            EPDV  YN +I GF K      A ++ +RL R     P VV+YN+MI  LC  G     
Sbjct: 214 VEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEG 273

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            ++++++ ++  K  + TY+ LI      G    A K+ +EM                 G
Sbjct: 274 LEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNG 333

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G V + F+    +  +    +V SYN+ L+ L   GK ++   L   +    LE +
Sbjct: 334 LCKAGNVEECFELWEEM-GKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGL----LEAD 388

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAA--KEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             TY +++  LC +G    A+ VL  A  +E G+  D ++Y  LI+A CK+GRLD A   
Sbjct: 389 SATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGV 448

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           ++ M   GC  +    N ++  F K+   D A+++F ++S  GC   V SYN + + L  
Sbjct: 449 VELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLR 508

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +     A   ++EML KG +PD ITY++LI  L    M+D A+ L      T  +P +I 
Sbjct: 509 AERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIM 568

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           YNI+I   C + ++ +++++ + + +K C  N  T+  ++EG 
Sbjct: 569 YNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGF 610



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 209/491 (42%), Gaps = 89/491 (18%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL--EK 100
           LI    ++G    +L   + M   G +PDVV    +I  FF+     KA  + E L  E+
Sbjct: 189 LIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREE 248

Query: 101 YGEPDVFAYNALISGFCK-----------------------------------ANQIELA 125
              P V +YN +ISG CK                                   A  +  A
Sbjct: 249 LVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGA 308

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            KV + +  RG  PDVVT N M+  LC  G +E  F++++++ + + +  V +Y I ++ 
Sbjct: 309 RKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKG 367

Query: 186 TMLEGQTDKAMKLLDEM-------------GMCKKGMVGQAFQFVRSLESR--GCQPDVI 230
               G+ D AM L D +             G+C  G V +A Q +   E R  G   D  
Sbjct: 368 LFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEF 427

Query: 231 SYNMLLRTLLNMGKWEEGE-----------------------------------KLMTEM 255
           +Y+ L+  L   G+ +E +                                   K+  EM
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             +G    VV+Y+ILI+ L R  +  +A D +    EKG  PD  +Y  LI    +   +
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMM 547

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           D A+      +  G  PDI+ YN ++   C +G  + AL+++  L    C  N+ ++NT+
Sbjct: 548 DAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTI 606

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
               +  G+   A  + + +L   ++PD I+YN  +  LC  G V +AVG L D     F
Sbjct: 607 MEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGF 666

Query: 436 RPTVISYNIII 446
            PT I++NI++
Sbjct: 667 LPTAITWNILV 677



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 29/467 (6%)

Query: 41  MKLIKRSFRAGKFDESLYFIESMV-ANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + L+K   +    +E+L+  ++M    GC P +     L+  F +  +  +A    +  E
Sbjct: 81  LTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFE 140

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P+V  YN L+   CK  + E    +L  +   G SPD +TY  +IG +   G + 
Sbjct: 141 AARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLG 200

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A +VFD++     +P V+ Y ++I      G   KA ++ + +                
Sbjct: 201 FALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK G   +  +    ++    + D+ +Y+ L+  L   G      K+  EM+ RG+
Sbjct: 261 ISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+VVT + +++ LC+ G  E+  ++     +  L  +  SY+  +    ++G++D A+ 
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAM- 378

Query: 321 FLDYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLS--DVGCPPNVSSYNTMFS 377
               M+ DG L  D   Y  ++   C NG  ++AL++ E+    + G   +  +Y+++ +
Sbjct: 379 ----MLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLIN 434

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           AL   G    A G++  M  +G + +    N LI    +   +D AV +  +M       
Sbjct: 435 ALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSL 494

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           TV+SYNI+I G  +  R  E+ + +  M EKG KP+  TY  LI G+
Sbjct: 495 TVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 176/391 (45%), Gaps = 24/391 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     AG    +    E MV  G +PDVV C  ++    +     +   + E + 
Sbjct: 292 YSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG 351

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           K    +V +YN  + G  +  +++ A  + D L       D  TY +++  LC  G +  
Sbjct: 352 KCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNR 407

Query: 160 AFKVFDQLLRDNCKPTV--ITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           A +V ++         V    Y+ LI A   EG+ D+A  +++ M               
Sbjct: 408 ALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVL 467

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G  K   +  A +  R +  +GC   V+SYN+L+  LL   ++ E    + EM+ +G 
Sbjct: 468 IDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGW 527

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P+++TYS LI  L      + A+ +     + G  PD   Y+ +I   C  G+++ A++
Sbjct: 528 KPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQ 587

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               +    C+ ++V +NTI+  F K GN + A +I+  + +    P++ SYN     L 
Sbjct: 588 LYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLC 646

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           S G    A+G + + L +G  P  IT+N L+
Sbjct: 647 SCGRVTDAVGFLDDALVRGFLPTAITWNILV 677



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 169/343 (49%), Gaps = 25/343 (7%)

Query: 156 MIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           M   A  VF  +     C PT+ ++  L+ A +   Q  +A                   
Sbjct: 92  MPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAE------------------ 133

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            F +  E+    P+V +YN+L++ +   G++E+G  L+T M   G+ P+ +TY  LI  +
Sbjct: 134 NFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGV 193

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPD 333
            + G    A++V    +E+G+ PD   Y+ +I  + K G    A E  + ++ +    P 
Sbjct: 194 AKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS 253

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V+YN +++  CK G   + LEI+E++       ++ +Y+ +   L  +GD   A  +  
Sbjct: 254 VVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYE 313

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM+ +G+ PD +T N++++ LC+ G V+E   L  +M     R  V SYNI + G  +  
Sbjct: 314 EMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENG 372

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           ++++++ +   + E     +  TY +++ G+ + G+   A+++
Sbjct: 373 KVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQV 411



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 24/303 (7%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C N   N  ++V   AE R        DV E  +  LI    + G+ DE+   +E M   
Sbjct: 400 CWNGYVNRALQVLEEAEHREG----GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKR 455

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GCK +  +C  LI  F +  K + AV+V   +   G    V +YN LI+G  +A +   A
Sbjct: 456 GCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREA 515

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              ++ +  +G+ PD++TY+ +IG L    M+++A +++ Q L    KP +I Y I+I  
Sbjct: 516 YDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHR 575

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             +C  G V  A Q   +L  + C  +++++N ++     +G  
Sbjct: 576 ------------------LCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNC 616

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           E   K+   ++   L+P++++Y+I +  LC  G+  DAV  L  A  +G  P A +++ L
Sbjct: 617 EMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNIL 676

Query: 306 ISA 308
           + A
Sbjct: 677 VRA 679



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI   + +   D +L      +  G KPD++M   +I +     K   A+++   L 
Sbjct: 534 YSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLR 593

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
           +    ++  +N ++ GF K    E+A+K+   +      PD+++YNI +  LCS G +  
Sbjct: 594 QKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTD 653

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATML 188
           A    D  L     PT IT+ IL++A + 
Sbjct: 654 AVGFLDDALVRGFLPTAITWNILVRAVIF 682


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 238/506 (47%), Gaps = 55/506 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  DE+  F+  +  NG KP  V    +++ F +     +A+ +++ +E     PD  
Sbjct: 298 REGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSV 357

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L + + +A  ++    V+D + S+G  P+ +TY  +I +    G  + A ++F  +
Sbjct: 358 TYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLM 417

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-----------------CKKGMV 210
               C P V TY  ++     + +T+  +K+L EM +                  ++G  
Sbjct: 418 KDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKH 477

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +R +++ G +PD  ++N L+      G   +  K+  EM+  G  P V TY+ L
Sbjct: 478 NYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNAL 537

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +++L R G  + A  V++  + KG  P+  SY  L+  Y K G +   IE ++  I DG 
Sbjct: 538 LNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVK-GIEKVEKEIYDGH 596

Query: 331 L------------------------------------PDIVNYNTILAAFCKNGNADQAL 354
           +                                    PD+V  N++L+ F +N    +A 
Sbjct: 597 VFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAR 656

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+   + + G  PN+ +YN +       G+  +A  ++  + + G EPD ++YN++I   
Sbjct: 657 EMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGF 716

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           CR G++ EA+G+L +M +   +PT+++YN  + G+      +E+ EV+  M E  C+P+E
Sbjct: 717 CRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSE 776

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            TY +L++G    G   EAM+  + +
Sbjct: 777 LTYKILVDGYCKAGKYEEAMDFVSKI 802



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 190/383 (49%), Gaps = 18/383 (4%)

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           + +Q  +A+K+ D +    +S DV  Y  ++ S    G  + A  +F ++      PT++
Sbjct: 192 RESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLV 251

Query: 178 TYTILIQATMLEGQT-DKAMKLLDEM----------------GMC-KKGMVGQAFQFVRS 219
           TY +++      G++ D+ ++LLDEM                  C ++GM+ +A +F+  
Sbjct: 252 TYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAE 311

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           L+  G +P  ++YN +L+     G + E   ++ EM      P+ VTY+ L ++  R G 
Sbjct: 312 LKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGF 371

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++ + V+     KG+ P+A +Y  +I AY K GR D A+     M   GC P++  YN+
Sbjct: 372 LDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNS 431

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +LA   K    +  +++  ++   GC PN +++NTM +     G       ++ EM + G
Sbjct: 432 VLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG 491

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            EPD+ T+N+LIS   R G   ++  +  +M  + F P V +YN ++    +      + 
Sbjct: 492 FEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAE 551

Query: 460 EVLAAMFEKGCKPNETTYVLLIE 482
            V+  M  KG KPNE +Y LL+ 
Sbjct: 552 SVIQDMRTKGFKPNENSYSLLLH 574



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 229/475 (48%), Gaps = 29/475 (6%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIE-SMVANGCKPDVVMCTK----LIKKFFQE 85
           + F++ E  F  L+K    +G ++ +L   E   +  G   ++ +  +    +++   +E
Sbjct: 134 VKFELLEADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRE 193

Query: 86  RKSNKAVRVMEIL--EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
            + + A ++ +++  EKY   DV AY  ++  + +  + + A  +  +++  G  P +VT
Sbjct: 194 SQHSIASKLFDLIPVEKYS-LDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVT 252

Query: 144 YNIMIGSLCSRGM-IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           YN+M+      G   +   ++ D++     +    T + +I A   EG  D+A K L E+
Sbjct: 253 YNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAEL 312

Query: 203 GM-----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                               K G+  +A   ++ +E   C PD ++YN L  T +  G  
Sbjct: 313 KFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFL 372

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +EG  ++  M S+G+ PN +TY+ +I +  + G+ +DA+ +    K+ G  P+ Y+Y+ +
Sbjct: 373 DEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSV 432

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           ++   K  R +  I+ L  M  +GC P+   +NT+LA   + G  +   ++  ++ + G 
Sbjct: 433 LAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGF 492

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+  ++NT+ SA    G ++ +  M  EM+  G  P   TYN+L++ L R G    A  
Sbjct: 493 EPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAES 552

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           ++ DM +  F+P   SY++++  + K   +    +V   +++    P   +++LL
Sbjct: 553 VIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFP---SWILL 604



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 217/462 (46%), Gaps = 68/462 (14%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG  DE +  I++M + G  P+ +  T +I  + +  + + A+R+  +++  G  P+V+
Sbjct: 368 RAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVY 427

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++++   K ++ E   KVL  ++  G +P+  T+N M+ ++CS    E      +++
Sbjct: 428 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTML-AVCSE---EGKHNYVNKV 483

Query: 168 LRD--NC--KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           LR+  NC  +P   T+  LI A    G    + K+  EM              V+S    
Sbjct: 484 LREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEM--------------VKS---- 525

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT--- 280
           G  P V +YN LL  L   G W+  E ++ +M ++G +PN  +YS+L+    + G     
Sbjct: 526 GFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGI 585

Query: 281 -----------------------------------EDAVDVLRAAKEKGLTPDAYSYDPL 305
                                              E A D L   ++ G  PD    + +
Sbjct: 586 EKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQL---QKYGYKPDLVVINSM 642

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           +S + ++     A E L ++   G  P++  YN ++  + + G   +A E+ + + + G 
Sbjct: 643 LSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGP 702

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+V SYNT+       G    A+G++SEM +KGI+P  +TYN+ +S      + DEA  
Sbjct: 703 EPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANE 762

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           ++  M     RP+ ++Y I++ G+CK  +  E+++ ++ + E
Sbjct: 763 VIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 230/561 (40%), Gaps = 99/561 (17%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           S DV+   +  ++    R GK+  ++     M   G  P +V    ++  + +  +S   
Sbjct: 212 SLDVR--AYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWD- 268

Query: 92  VRVMEILE----KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
            R++E+L+    K  E D F  + +IS   +   ++ A K L  L+  G+ P  VTYN M
Sbjct: 269 -RILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSM 327

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           +      G+   A  +  ++  +NC P  +TY  L    +  G  D+ M ++D M     
Sbjct: 328 LQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGV 387

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                          K G    A +    ++  GC P+V +YN +L  L    + E+  K
Sbjct: 388 MPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 447

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ EM   G  PN  T++ +++    +GK      VLR  K  G  PD  +++ LISAY 
Sbjct: 448 VLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYA 507

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G    + +    M+  G  P +  YN +L A  + G+   A  + + +   G  PN +
Sbjct: 508 RCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNEN 567

Query: 371 SYNTMFSALWSSGD-------------------------------KIRAL-GM---ISEM 395
           SY+ +      +G+                               K R L GM     ++
Sbjct: 568 SYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQL 627

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEA---------VGL---------LVDM------- 430
              G +PD +  NS++S   R+ M  +A          GL         L+D+       
Sbjct: 628 QKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGEC 687

Query: 431 ----------ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
                     +++   P V+SYN +I GFC+   + E+I VL+ M  KG +P   TY   
Sbjct: 688 WKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTF 747

Query: 481 IEGIGYGGWRAEAMELANALV 501
           +   GY G   E  + AN ++
Sbjct: 748 LS--GYAG--MELFDEANEVI 764



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 24/373 (6%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M  NGC P+      ++    +E K N   +V+  ++  G EPD   +N LIS + +   
Sbjct: 452 MKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGS 511

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              + K+   +   GF+P V TYN ++ +L  RG  ++A  V   +     KP   +Y++
Sbjct: 512 EVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSL 571

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL--------------------E 221
           L+      G      K+  E+     G V  ++  +R+L                    +
Sbjct: 572 LLHCYSKAGNVKGIEKVEKEI---YDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ 628

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +PD++  N +L        + +  +++  +   GL+PN+ TY+ L+    R+G+  
Sbjct: 629 KYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECW 688

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A +VL+  +  G  PD  SY+ +I  +C+ G +  AI  L  M + G  P IV YNT L
Sbjct: 689 KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFL 748

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
           + +      D+A E+   + +  C P+  +Y  +      +G    A+  +S++    I 
Sbjct: 749 SGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKELDIS 808

Query: 402 PDEITYNSLISCL 414
            D+ +   L SC+
Sbjct: 809 FDDQSVKRLGSCI 821



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 55/369 (14%)

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A K+FD +  +     V  YT ++ +    G+  +A+ L  +M                 
Sbjct: 199 ASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKM----------------- 241

Query: 220 LESRGCQPDVISYNMLLRTLLNMGK-WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  G  P +++YN++L     MG+ W+   +L+ EM S+GLE +  T S +IS+  R+G
Sbjct: 242 -KEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREG 300

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             ++A   L   K  G  P   +Y+ ++  + K G    A+  L  M  + C PD V YN
Sbjct: 301 MLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYN 360

Query: 339 -----------------------------------TILAAFCKNGNADQALEIFEKLSDV 363
                                              T++ A+ K G  D AL +F  + D+
Sbjct: 361 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDL 420

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC PNV +YN++ + L         + ++ EM   G  P+  T+N++++    +G  +  
Sbjct: 421 GCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYV 480

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
             +L +M++  F P   ++N +I  + +     +S ++   M + G  P  TTY  L+  
Sbjct: 481 NKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNA 540

Query: 484 IG-YGGWRA 491
           +   G W+A
Sbjct: 541 LARRGDWKA 549



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 1/217 (0%)

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    ++ L  D    + ++    ++ +  +A +  D +  +    D+  Y TIL ++ +
Sbjct: 168 LHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYAR 227

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI-RALGMISEMLSKGIEPDEI 405
            G   +A+++F K+ ++G  P + +YN M       G    R L ++ EM SKG+E DE 
Sbjct: 228 TGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEF 287

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           T +++IS   R+GM+DEA   L +++   ++P  ++YN ++  F K     E++ +L  M
Sbjct: 288 TCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEM 347

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +  C P+  TY  L       G+  E M + + + S
Sbjct: 348 EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTS 384


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 21/419 (5%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE---PDVFAYNALISGFCKANQIE 123
           GC PDV   T L+K    E+K  +AV ++ ++ + G+   P+V +Y  +I GF K +++ 
Sbjct: 79  GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  +   +  RG  PDVVT N +I  LC    ++ A +V  Q+   +  P   TY  L+
Sbjct: 139 KAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLV 198

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
              +  GQ  +A+++L +M                     G  P+ ++Y+ML+  L   G
Sbjct: 199 HGYLSSGQLKEAVRILKQM------------------SRHGQPPNGVTYSMLIDCLCKFG 240

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
              E  +++  MI     PNV TY  L+      G   +  +++    + G+ PD + ++
Sbjct: 241 GHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFN 300

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
             I AY K GRLD A+   + M   G +PDI++Y T++   CK G  D A+  F ++ D 
Sbjct: 301 IQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD 360

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  P++  +  +       G   +A  +  EM+ +GI P  + + ++I  L ++G V EA
Sbjct: 361 GLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEA 420

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             L   M     +P V+SYN II G+    +++E +++L  M   G KPN  T+  L++
Sbjct: 421 KTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD 479



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           S+ + P  VTY+ILIS  C  G    A   L    + GL  +A S+ P++   C + R  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 317 LAIEF-LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYN 373
            A+   + +    GC PD+ +Y  +L   C     ++A+++   +++ G  CPPNV SY 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           T+    +   +  +A  +  EML +GI PD +T NS+I  LC+   +D+A  +L  M   
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P   +YN ++ G+  + ++ E++ +L  M   G  PN  TY +LI+ +   G   EA
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 494 MELANALVS 502
            E+ N+++ 
Sbjct: 246 REILNSMIQ 254



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 3/284 (1%)

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S+   P  ++Y +L+     +G        + ++I  GL  N ++++ ++ +LC + +T 
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 282 DAVD-VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG--CLPDIVNYN 338
           DA++ V+R   + G TPD +SY  L+   C + + + A++ +  M  DG  C P++V+Y 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  F K     +A  +F ++ D G PP+V + N++   L       +A  ++ +M  K
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            I PD  TYNSL+      G + EAV +L  M      P  ++Y+++I   CK     E+
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            E+L +M +    PN  TY  L+ G    G   E   L + +V 
Sbjct: 246 REILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQ 289



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 20/163 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI      GK++++      M+  G +P VV+ T +I K F+E K  +A  + +++ 
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428

Query: 100 KYG-EPDVFAYNALISGFCKANQIELA-------------------NKVLDRLRSRGFSP 139
               +P+V +YNA+I G+  A +++                     N +LD + S G  P
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKP 488

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           DV T N +I S C  G IE    +F ++L    K   +T  I+
Sbjct: 489 DVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 224/466 (48%), Gaps = 22/466 (4%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +F      + ++++      KFD++ +    M  +   P +V   K++    + +  +  
Sbjct: 45  AFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVV 104

Query: 92  VRVMEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           + + + +E        PD++  N L++ FC+  Q   A   L ++   G  PD+VT + +
Sbjct: 105 INLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSL 164

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           +   C    I+ A  V  Q+ +   K  V+  TILI                    +CK 
Sbjct: 165 VNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT------------------LCKN 206

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
            +V  A + ++ ++ RG  P+V++Y+ L+  L   G+  + E+ + EM S+ + PNV+T+
Sbjct: 207 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 266

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S LI +  + GK      V +   +  + P+ ++Y  LI   C   R+D AI+ LD MIS
Sbjct: 267 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 326

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC P++V Y+T+   F K+   D  +++ + +   G   N  S NT+    + +G    
Sbjct: 327 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 386

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           ALG+   M S G+ P+  +YN +++ L  +G V++A+     M+ TR    +I+Y I+I 
Sbjct: 387 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 446

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           G CK   + E+ ++   +  K  +P+   Y ++I  +   G R EA
Sbjct: 447 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 492



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 25/375 (6%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
           +L ++  M+  G +PD+V  + L+  F        AV V   +EK G + DV     LI 
Sbjct: 142 ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 201

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
             CK   +  A +VL R++ RG SP+VVTY+ +I  LC  G +  A +   ++      P
Sbjct: 202 TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 261

Query: 175 TVITYTILIQATMLEGQ---TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            VIT++ LI A    G+    D   K++ +M +                      P+V +
Sbjct: 262 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI---------------------DPNVFT 300

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ L+  L    + +E  K++  MIS+G  PNVVTYS L +   +  + +D + +L    
Sbjct: 301 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 360

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G+  +  S + LI  Y + G++DLA+    YM S+G +P+I +YN +LA    NG  +
Sbjct: 361 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 420

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL  FE +       ++ +Y  M   +  +     A  +  ++  K +EPD   Y  +I
Sbjct: 421 KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 480

Query: 412 SCLCRDGMVDEAVGL 426
           + L R GM  EA  L
Sbjct: 481 AELNRAGMRTEADAL 495



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           R      I Y  +LR+ L+  K+++   L   M      P++V ++ +++++ +    + 
Sbjct: 44  RAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDV 103

Query: 283 AVDVLRA---AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            +++ +    A+   ++PD Y+ + L++ +C+  +   A+ +L  M+  G  PDIV  ++
Sbjct: 104 VINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASS 163

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++  FC + +   A+ +  ++  +G   +V     +   L  +   + AL ++  M  +G
Sbjct: 164 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 223

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI------------------- 440
           I P+ +TY+SLI+ LC+ G + +A   L +M+S +  P VI                   
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283

Query: 441 ----------------SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
                           +Y+ +I G C   R++E+I++L  M  KGC PN  TY  L  G
Sbjct: 284 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 342



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 19/222 (8%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +S D     +  LI       + DE++  ++ M++ GC P+VV  + L   FF+  + + 
Sbjct: 292 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 351

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            +++++ + + G   +  + N LI G+ +A +I+LA  V   + S G  P++ +YNI++ 
Sbjct: 352 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 411

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            L + G +E A   F+ + +      +ITYTI+I                   GMCK  M
Sbjct: 412 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH------------------GMCKACM 453

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           V +A+     L+ +  +PD  +Y +++  L   G   E + L
Sbjct: 454 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 223/447 (49%), Gaps = 31/447 (6%)

Query: 74  MCTKLIKKFFQER-----KSNKAVRVMEILE---KYG-EPDVFAYNALISGFCKANQIEL 124
           M T+L  KF         KSN+  +   +L    K G  PD+  YN LI G+C+   I+ 
Sbjct: 1   MITRLSTKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDA 60

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A  +L+R++  G +PDVV+YN +      + +++ +  +FD++L+   +P V +Y IL+ 
Sbjct: 61  AYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMH 120

Query: 185 ATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESRGCQ 226
                G+ ++A  +  ++                  G+CK G V  A    R+L  RG  
Sbjct: 121 CYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFV 180

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V++YN ++  L    +  +  +++ E    G EPN +TY+ ++    R G+ E  +++
Sbjct: 181 PEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEI 240

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L   + KG T D ++Y  +++A  K GR++ A E  + M+S+G +PD+ +YNT++  FC+
Sbjct: 241 LSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCR 300

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D+AL + +++   G   +  ++  +   L   G+   A   +  M + G   + + 
Sbjct: 301 QGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVA 360

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           +NS++ CL + G +D+AV +   ME         +Y  ++   C+ ++   + ++L A  
Sbjct: 361 FNSILDCLGKAGDIDKAVKVFDSMEV----KDSFTYTSLLHNLCRAKKFRIASKLLVASI 416

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEA 493
           E G +    T   +I+G+   G   EA
Sbjct: 417 EDGFQILRATQRAVIDGLTTSGLVYEA 443



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 198/392 (50%), Gaps = 19/392 (4%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N  IS  CK+NQI  A  VL      G +PD++TYN +I   C    I++A+ + +++  
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V++Y  L    + +    K++ L DEM                 L+S G +PDV
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEM-----------------LQS-GIRPDV 112

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            SYN+L+     +GK EE   +  ++  RG + P++ +Y+++I+ LC++G   +A+ + R
Sbjct: 113 WSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFR 172

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             + +G  P+  +Y+ +I+  CK  RL  A   L+     G  P+ + Y T++    + G
Sbjct: 173 NLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCG 232

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             +Q LEI  ++   G   +  +Y T+ +AL  +G    A  +  +M+S G+ PD  +YN
Sbjct: 233 RLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYN 292

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           ++I+  CR G  DEA+ L+ ++E    +    ++ III G CK      + + L  M   
Sbjct: 293 TMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTL 352

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           G   N   +  +++ +G  G   +A+++ +++
Sbjct: 353 GFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM 384



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 139/271 (51%), Gaps = 1/271 (0%)

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N+ + T+    +  + E ++ + I  GL P+++TY+ LI   CR    + A ++L   KE
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+ PD  SY+ L S   +   L  +++  D M+  G  PD+ +YN ++  + + G  ++
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEE 130

Query: 353 ALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           A  +F  + + G   P+++SYN M + L  +G    AL +   +  +G  P+ +TYN++I
Sbjct: 131 ANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMI 190

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
           + LC+   + +A  +L +     F P  I+Y  ++    +  R+ + +E+L+ M  KG  
Sbjct: 191 NGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFT 250

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +   Y  ++  +   G   EA E+A  ++S
Sbjct: 251 FDGFAYCTVVAALVKTGRIEEADEIAEKMMS 281



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 7/153 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+ +E+    E M++NG  PD+     +I  F ++ + ++A+R+++ +EK G + D +
Sbjct: 265 KTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQY 324

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I G CK    E A K LD + + GF  ++V +N ++  L   G I+ A KVFD +
Sbjct: 325 THTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM 384

Query: 168 -LRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
            ++D+      TYT L+       +   A KLL
Sbjct: 385 EVKDS-----FTYTSLLHNLCRAKKFRIASKLL 412


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 214/456 (46%), Gaps = 32/456 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K     GK DE++   + M +    PDVV    LI   F+ R S +  R++E ++  G
Sbjct: 143 LVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRG 202

Query: 103 --EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             EP+   +N ++  F K  +I  A+  + ++   G SPD  TYN MI   C  G +  A
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           F++ D++ R   KP + T   ++    +E + +                  +A++     
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPE------------------EAYELTVKA 304

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
             RG   D ++Y  L+       + ++  KL  EM  RG+ P+VV+Y+ LI  LC  GKT
Sbjct: 305 RKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKT 364

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + AVD L    EKGL PD  S + +I  YC +G +D A +F + M+ +   PDI   N +
Sbjct: 365 DQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNIL 424

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L   C+    ++A ++F          +V +YNTM S L   G    A  ++++M  K  
Sbjct: 425 LRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKF 484

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMEST----RFRPTV--------ISYNIIILG 448
           EPD+ TYN+++  L   G  +EA   +  +  T    +   T         I Y+  I  
Sbjct: 485 EPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISD 544

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            C   +  E++++     +KG   N+ TY+ L++G 
Sbjct: 545 LCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGF 580



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 20/384 (5%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI-GSLCSRGMIESAFKV 163
           DV+ YN L+ G C   +I+ A +V D + S    PDVVTYN +I G    RG  E  F++
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTE-GFRL 194

Query: 164 FDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
            +++  R   +P  +T+ I+++    EG+ ++A   + +M                 G C
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFC 254

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G +G+AF+ +  +  +G +PD+ + N +L TL    K EE  +L  +   RG   + V
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEV 314

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  LI    +  + + A+ +    K++G+ P   SY+PLI   C  G+ D A++ L+ +
Sbjct: 315 TYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNEL 374

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G +PD V+ N I+  +C  G  D+A +   K+      P++ + N +   L      
Sbjct: 375 LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDML 434

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A  + +  +SK    D +TYN++IS LC++G +DEA  L+ DME  +F P   +YN I
Sbjct: 435 EKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAI 494

Query: 446 ILGFCKTRRINESIEVLAAMFEKG 469
           +       R  E+ + ++ + E G
Sbjct: 495 VRALTHAGRTEEAEKFMSKLSETG 518



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 37/318 (11%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C+  K  E   ++  A  R       + + E  +  LI   F+  + D++L   E M   
Sbjct: 289 CMEKKPEEAYELTVKARKR------GYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKR 342

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAV-RVMEILEKYGEPDVFAYNALISGFCKANQIELA 125
           G  P VV    LI+      K+++AV ++ E+LEK   PD  + N +I G+C    ++ A
Sbjct: 343 GIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKA 402

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +  +++    F PD+ T NI++  LC   M+E AFK+F+  +       V+TY  +I  
Sbjct: 403 FQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISY 462

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
                             +CK+G + +AF  +  +E +  +PD  +YN ++R L + G+ 
Sbjct: 463 ------------------LCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRT 504

Query: 246 EEGEKLMTEMISRGLEPNV------------VTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           EE EK M+++   G                 + YS  IS LC  GK ++A+ + + +++K
Sbjct: 505 EEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQK 564

Query: 294 GLTPDAYSYDPLISAYCK 311
           G++ + Y+Y  L+  + K
Sbjct: 565 GVSLNKYTYIKLMDGFLK 582


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 238/536 (44%), Gaps = 54/536 (10%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
              +  LI    +A +  ESL  +  MV+ G   D+VM T L+ +  +E K  +A  V+ 
Sbjct: 327 HVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR 386

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             +     P+   Y  L+   C+A  I+ A +VL ++  +   P+VVT++ +I  L  RG
Sbjct: 387 HAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRG 446

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATM-LEGQ----------------------- 191
            +  A     ++      P V+TY  LI      +GQ                       
Sbjct: 447 CLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVD 506

Query: 192 ---------------------TDKAMKLLDEM-------GMCKKGMVGQAFQFVRSLESR 223
                                 D+   LLD +       G+ K G +  AF+  + L  +
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD + YN+ +  L  +GK+ E +  + EM + GLEP+  TY+ +I++ CR+GKT  A
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +L+  K   + P+  +Y  L+    + G +  A   L+ M S G  P  + +  +L A
Sbjct: 627 LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
              +   D  LEI E +   G   +++ YNT+   L   G    A  ++ EML++GI PD
Sbjct: 687 CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPD 746

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            IT+N+LI   C+   +D A  +   M      P + ++N ++ G     RI E+  VL+
Sbjct: 747 TITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS 806

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR-DTFKRLNRTF 518
            M + G +PN  TY +L+ G      + EA+ L   +VS   I +  T+  L   F
Sbjct: 807 DMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 211/412 (51%), Gaps = 19/412 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           DVV    LI  + + +    A+ V+E +   G   DV  YN+L++GF  +   + A +V+
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           +R+++ G  P+VVTY  +IG  C    ++ AF +++ ++R    P V+T + L+      
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVD----- 300

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+C+ G   +A+   R ++  G  P+ ++Y  L+ +L    +  E  
Sbjct: 301 -------------GLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            L+ EM+SRG+  ++V Y+ L+  L ++GK E+A DVLR A+   +TP+  +Y  L+ A+
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G +D A + L  M     +P++V +++I+    K G   +A +   K+ D G  PNV
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y T+    +    +  AL +  +ML +G+E +    +SL++ L ++G ++ A  L  D
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           M+        ++Y  ++ G  KT  +  + +V   + EK   P+   Y + I
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 199/453 (43%), Gaps = 19/453 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           + G  + +    + M   G   D V  T L+   F+      A +V  E++EK   PD  
Sbjct: 514 KNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAV 573

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  I+  C   +   A   L  +R+ G  PD  TYN MI + C  G    A K+  ++
Sbjct: 574 VYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM 633

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R++ KP +ITYT L+   +  G   KA  LL+EM            Q V    S   +P
Sbjct: 634 KRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRP 693

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DVI                   ++   M+  GL  ++  Y+ L+  LC  G   +A  VL
Sbjct: 694 DVIL------------------EIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G+ PD  +++ LI  +CK   LD A      M+  G  P+I  +NT+L      
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A  +   +  VG  PN  +Y+ + +      +K+ AL +  EM+SKG  P   TY
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           NSL+S   + GM+++A  L  +M+      T  +Y+I++ G+ K R   E   +L  M E
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            G KP++ T   +       G   EA  L   L
Sbjct: 916 LGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 219/463 (47%), Gaps = 20/463 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  +I    + G   ++  ++  M  +G  P+VV    LI  FF+ +    A+ V  ++L
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  E + F  ++L++G  K   IE A  +   +  RG   D V Y  ++  L   G + 
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +AFKV  +L+  N  P  + Y + I      G+  +A   L EM                
Sbjct: 555 AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C++G   +A + ++ ++    +P++I+Y  L+  LL  G  ++ + L+ EM S G  
Sbjct: 615 AARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFA 674

Query: 262 PNVVTYSILISSLCRDGKTEDAV-DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           P  +T+  ++ + C   +  D + ++       GL  D   Y+ L+   C  G    A  
Sbjct: 675 PTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            LD M++ G  PD + +N ++   CK+ + D A  I+ ++   G  PN++++NT+   L 
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
           S+G    A  ++S+M   G+EP+ +TY+ L++   +     EA+ L  +M S  F P   
Sbjct: 794 SAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 853

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +YN ++  F K   +N++ E+ + M  +G     +TY +L+ G
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 227/515 (44%), Gaps = 40/515 (7%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H L+  ++ +    L     RAG+F  + + + S+ A+   P   +  +LI        +
Sbjct: 7   HALAPSLQASFLCSLALAFLRAGRFSAASHVVFSLPAS---PPARLLRRLIPALASSGLA 63

Query: 89  NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL----DRLRSRGFSPDVVTY 144
             AV    +       D    N++I  +C    +  A  +L            + D V+Y
Sbjct: 64  AAAVCFRPV-----PGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSY 118

Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM 204
           NI + +L  +G    A  V  ++    CK  V    + +   ++              G+
Sbjct: 119 NIFLAALSEQGHGRLAPPVLSEM----CKRGVSWDGVTVSTALV--------------GL 160

Query: 205 CKKGMVGQAFQFVRSL-ESRGCQP-DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           C+ G+VG+A      L   RG    DV+ +N L+     +        ++  M ++G+  
Sbjct: 161 CRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVAL 220

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +VV Y+ L++     G  + A++V+   K  G+ P+  +Y  LI  YCK   +D A    
Sbjct: 221 DVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLY 280

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M+  G LPD+V  + ++   C++G   +A  +F ++  +G  PN  +Y T+  +L  +
Sbjct: 281 EGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                +LG++ EM+S+G+  D + Y +L+  L ++G ++EA  +L   +S    P  ++Y
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL-- 500
            +++   C+   I+ + +VL  M EK   PN  T+  +I G+   G   +A +    +  
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKD 460

Query: 501 ------VSMHAISRDTFKRLNRTFPLLDVYKEISH 529
                 V  +    D F +       LDVY+++ H
Sbjct: 461 SGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLH 495



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 179/403 (44%), Gaps = 19/403 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D  +YN  ++   +     LA  VL  +  RG S D VT +  +  LC  G++  A  + 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 165 DQLLRDNC--KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           + L+R        V+ +  LI           A+ +++ M                 G  
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G    A + V  +++ G +P+V++Y  L+         +E   L   M+  G+ P+VV
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T S L+  LCRDG+  +A  + R   + G+ P+  +Y  LI +  K  R   ++  L  M
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S G + D+V Y  ++    K G  ++A ++          PN  +Y  +  A   +G+ 
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  ++ +M  K + P+ +T++S+I+ L + G + +A   +  M+ +   P V++Y  +
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           I GF K +    +++V   M  +G + N      L+ G+   G
Sbjct: 474 IDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNG 516


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 222/479 (46%), Gaps = 18/479 (3%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
            F  LI+   + G  D ++   E +   G KP V  C  ++    +++++     +  E+ 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 99   EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +K   P+V  +N LI+G C    ++ A  +L ++   GF P +VTYN ++   C +G  +
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            +A ++ D ++    +  V TY + I       ++ KA  LL +M                
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096

Query: 203  -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             G  K+G +G A Q    +      P+ ++YN L+    ++G +EE  +L+  M + GL 
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 1156

Query: 262  PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             N VTY  L++ LC+  K E A  +L   +   +     +Y  LI   CK+G LD A++ 
Sbjct: 1157 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 1216

Query: 322  LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            +  M  DG  PD++ Y++++  FC+ GN   A EI  ++   G   N   Y+T+      
Sbjct: 1217 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 1276

Query: 382  SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
             G+   A+ + + M   G   D  T N L+S LCRDG + EA   L  M      P  I+
Sbjct: 1277 HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 1336

Query: 442  YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            Y+ II G+        +      M + G  P+  TY  L++G+  GG   EA +  N L
Sbjct: 1337 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 219/527 (41%), Gaps = 67/527 (12%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
            + G++  ++  I+ M+  G + DV      I       +S KA  +++ + K    P+  
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             YN LI+GF K  +I +A +V + +     SP+ VTYN +IG  C  G  E A ++ D +
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150

Query: 168  LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 +   +TY  L+       + + A +LL+ M                 G+CK GM+
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGML 1210

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS-- 268
             +A Q V ++   G  PDVI+Y+ L+     +G  +  ++++  M   GL  N + YS  
Sbjct: 1211 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 1270

Query: 269  ---------------------------------ILISSLCRDGKTEDAVDVLRAAKEKGL 295
                                             +L+SSLCRDGK  +A   L      GL
Sbjct: 1271 IYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 1330

Query: 296  TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             P++ +YD +I+ Y   G    A  F D MI  G  P    Y ++L   CK GN  +A +
Sbjct: 1331 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 1390

Query: 356  IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
               +L  +    +   YNT+ +    SG+   A+ +  +M+   + PD  TY+SL++ LC
Sbjct: 1391 FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 1450

Query: 416  RDGMVDEAVGLL-VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            R G    AV L    M      P  + Y  ++ G  K      +      M +KG  P+ 
Sbjct: 1451 RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 1510

Query: 475  TTYVLLIEGIGYGG-------------WRAEAMELANALVSMHAISR 508
              +  +I+     G             W      LA   + +H  S+
Sbjct: 1511 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 20/393 (5%)

Query: 104  PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
            P VF  + LI  + K   I+ A +  + +   GF P V T N+++ S+      E  + +
Sbjct: 914  PSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 971

Query: 164  FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
            F ++      P V T+ ILI    +EG   KA  LL +M                  E  
Sbjct: 972  FREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM------------------EEN 1013

Query: 224  GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
            G  P +++YN LL      G+++   +L+  MI +G+E +V TY++ I +LC + ++  A
Sbjct: 1014 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 1073

Query: 284  VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
              +L+  +++ ++P+  +Y+ LI+ + K+G++ +A +  + M      P+ V YN ++  
Sbjct: 1074 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 1133

Query: 344  FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             C  G+ ++AL + + +   G   N  +Y T+ + L        A  ++  M    +   
Sbjct: 1134 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 1193

Query: 404  EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             I Y  LI  LC++GM+DEAV L+ +M      P VI+Y+ +I GFC+   I  + E++ 
Sbjct: 1194 HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 1253

Query: 464  AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             M+  G   N+  Y  LI      G   EAM++
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 214/508 (42%), Gaps = 54/508 (10%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            L+    R GK  E+  F+  M   G  P+ +    +I  +        A    + + K G
Sbjct: 1305 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 1364

Query: 103  E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + P  F Y +L+ G CK   +  A K L+RL     + D V YN ++   C  G +  A 
Sbjct: 1365 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 1424

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------G 203
             +FD+++++N  P   TY+ L+     +G+   A+ L                      G
Sbjct: 1425 ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 1484

Query: 204  MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            + K G    AF F   +  +G  PD +++N ++ +    G+  +     + M   G+ PN
Sbjct: 1485 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 1544

Query: 264  VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            + TY+IL+    +       + +      +G+ PD  ++  LI    K G  DL ++ L 
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604

Query: 324  YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             MI +G L D   +N ++  + ++G   +A ++   ++ +G  P+  +YN +F+ L    
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 384  DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES----------- 432
                +  ++ EML  G+ P    Y +LI+ +CR G +  A  L  +ME+           
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 433  ------------------------TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
                                     R  PT+ ++  ++  FC+  +I E++++   M   
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784

Query: 469  GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G K +   Y +LI G+   G  A A EL
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFEL 1812



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 196/458 (42%), Gaps = 20/458 (4%)

Query: 29   HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
            H +   V    +  L+  + ++G   E++   + MV N   PD    + L+    ++ K+
Sbjct: 1396 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKA 1455

Query: 89   NKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
              AV +       G   P+   Y  L+ G  KA   + A    + +  +G  PD V +N 
Sbjct: 1456 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNA 1515

Query: 147  MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
            +I S   RG +  A   F  +      P + TY IL+                   G  K
Sbjct: 1516 IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH------------------GFSK 1557

Query: 207  KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            K  + +      ++   G  PD ++++ L+  L   G  + G KL+ +MI  G   +  T
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 1617

Query: 267  YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
            ++ILI+     GK   A D++      G+ PD  +Y+ + +   K      +   L  M+
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 327  SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             +G +P    Y T++   C+ G+   A ++ +++  +G   +  + + M   L   G   
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 387  RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
             A+ ++  ML   + P   T+ +L+   CRD  + EA+ L   ME    +  V++YN++I
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +G C       + E+   M  +   PN TTY +L++ I
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 163/380 (42%), Gaps = 18/380 (4%)

Query: 70   PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKV 128
            P+ VM T L+    +      A    E + K G  PD  A+NA+I    +  Q+  AN  
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 1532

Query: 129  LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
               +R  G  P++ TYNI++     +  +     ++  ++R+   P  +T+  LI     
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592

Query: 189  EGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVIS 231
             G  D  +KLL +M M                  + G + +AF  V  + + G  PD  +
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 1652

Query: 232  YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            YN +   L     + E   ++ EM+  G+ P    Y  LI+ +CR G  + A  +    +
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712

Query: 292  EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
              G      +   ++      G+ + A+  LD+M+    LP I  + T++  FC++    
Sbjct: 1713 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1772

Query: 352  QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            +AL++   +   G   +V +YN +   + ++GD   A  +  EM  + + P+  TY  L+
Sbjct: 1773 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832

Query: 412  SCLCRDGMVDEAVGLLVDME 431
              +     + +   LL D++
Sbjct: 1833 DAISAANNLIQGEKLLTDLQ 1852



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 46/103 (44%)

Query: 399  GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
            G +P   T N +++ + +D   +    L  +M      P V ++NI+I G C    + ++
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 459  IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              +L  M E G  P   TY  L+      G    A+EL + ++
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 18/357 (5%)

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
           DV ++ I+I   C  G IE +F +  +L      P V+ YT LI     +G+ +KA  L 
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 200 DEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
            EMG  K G+V                    +Y +L+  L   G  ++G ++  +M   G
Sbjct: 222 FEMG--KLGLVANE----------------RTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PN+ TY+ +++ LC+DG+T+DA  V    +E+G++ +  +Y+ LI   C++ +L+ A 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           + +D M SDG  P+++ YNT++  FC  G   +AL +   L   G  P++ +YN + S  
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              GD   A  M+ EM  +GI+P ++TY  LI    R   +++A+ L + ME     P V
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            +Y+++I GFC   ++NE+  +  +M EK C+PNE  Y  +I G    G    A++L
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 231/512 (45%), Gaps = 48/512 (9%)

Query: 1   QSTVVSCINPKSNERVRVSSSAE---TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESL 57
           QS ++  I+ K + +   SSS     T   T    F + E     +I    ++   + S+
Sbjct: 59  QSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEV----IINSYVQSQSLNLSI 114

Query: 58  YFIESMVANGCKPDVVMCTKLIK------------KFFQERKSNKAVRVMEILEKYGEPD 105
            +   MV NG  P       L+              FF E KS   +            D
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL------------D 162

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           V+++  LI G C+A +IE +  +L  L   GFSP+VV Y  +I   C +G IE A  +F 
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKG 208
           ++ +        TYT+LI      G   +  ++ ++M                  +CK G
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
               AFQ    +  RG   ++++YN L+  L    K  E  K++ +M S G+ PN++TY+
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI   C  GK   A+ + R  K +GL+P   +Y+ L+S +C+ G    A + +  M   
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P  V Y  ++  F ++ N ++A+++   + ++G  P+V +Y+ +       G    A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   M+ K  EP+E+ YN++I   C++G    A+ LL +ME     P V SY  +I  
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
            CK R+  E+  ++  M + G  P+ +   L+
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 192/396 (48%), Gaps = 25/396 (6%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  +I+ + ++  + L+    + +   GF P    +N ++  +       S+F  +    
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG----SSSFNQWWSFF 152

Query: 169 RDNCKPTVI---TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            +N    V+   ++ ILI+                  G C+ G + ++F  +  L   G 
Sbjct: 153 NENKSKVVLDVYSFGILIK------------------GCCEAGEIEKSFDLLIELTEFGF 194

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P+V+ Y  L+      G+ E+ + L  EM   GL  N  TY++LI+ L ++G  +   +
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +    +E G+ P+ Y+Y+ +++  CKDGR   A +  D M   G   +IV YNT++   C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +    ++A ++ +++   G  PN+ +YNT+       G   +AL +  ++ S+G+ P  +
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN L+S  CR G    A  ++ +ME    +P+ ++Y I+I  F ++  + ++I++  +M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            E G  P+  TY +LI G    G   EA  L  ++V
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM+  G  P    ++ L++ +                K K +  D YS+  LI   C+
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCE 175

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
            G ++ + + L  +   G  P++V Y T++   CK G  ++A ++F ++  +G   N  +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y  + + L+ +G K +   M  +M   G+ P+  TYN +++ LC+DG   +A  +  +M 
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                  +++YN +I G C+  ++NE+ +V+  M   G  PN  TY  LI+G    G   
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355

Query: 492 EAMELANALVS 502
           +A+ L   L S
Sbjct: 356 KALSLCRDLKS 366



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 1/144 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKY 101
           LI    R+   ++++    SM   G  PDV   + LI  F  + + N+A R+ + ++EK 
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+   YN +I G+CK      A K+L  +  +  +P+V +Y  MI  LC     + A 
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 162 KVFDQLLRDNCKPTVITYTILIQA 185
           ++ ++++     P+    +++ +A
Sbjct: 534 RLVEKMIDSGIDPSTSILSLISRA 557


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 216/462 (46%), Gaps = 24/462 (5%)

Query: 49  RAGKFDESLYFIESMV-ANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE--PD 105
           RAG  D ++  ++ M   N C+PD V  T  +    + R+  +A+ + + + +  +  PD
Sbjct: 65  RAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           V AYN LI+G+CKA   + A  +  RL+  G   P+ V+++ ++  LC       A  VF
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++L    K  V     LI  T                  C+ GM+ QA + +  + +  
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCT------------------CRLGMLRQARRLLHHMTAHA 226

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C  D  +Y +L+      G+  E    M      G   + V Y+ +I    R G+  +A 
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +  +   K   PD ++Y+ LI A CK  +L+ A+         G + D+  Y+ ++ AF
Sbjct: 287 QLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K G A +ALE+F  +   GC P+   YN + S L   G    AL ++ +M  KGI PD 
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            TYN +I  L   G  ++A      M+  +  P V++YN ++ G  K RR +E+ ++   
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM-HA 505
           M    C P+ TT+  LI+ +   G   +A+E +  LV M HA
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHA 507



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 220/487 (45%), Gaps = 29/487 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+      +PN   +SFD   T  + L K S    +  ++L   + M+  G K DV +C 
Sbjct: 150 RLKQEGSCKPNA--VSFD---TLVIFLCKMS----RATDALAVFQEMLGAGLKADVNVCN 200

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            LI    +     +A R++  +  +    D F Y  L++  C+A Q+      ++  R  
Sbjct: 201 TLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHD 260

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G +   V YN +I      G +  A ++F+  +     P V TY +LI            
Sbjct: 261 GCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI------------ 308

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   +CK   + +A    +  E  G   DV +Y+ L+      G+  +  ++   M
Sbjct: 309 -------ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G  P+ V Y++LIS L + GK ++A+++L     KG+ PD  +Y+ +I      GR 
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           + A  F   M      PD+V YNT+L    K    D+A ++F+++    C P+++++ T+
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              L  +G    AL   + ++  G  P+   YN+LIS  CR G VD+   L  DM     
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P  I+Y I++LGF +    + ++E+L  M  +G  P   TY +LI  +   G   +A  
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYT 601

Query: 496 LANALVS 502
           L   +++
Sbjct: 602 LFKEMIA 608



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 162/386 (41%), Gaps = 21/386 (5%)

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
            L   G   D  T   M+  +C  G  E   ++  +L +     + +T T  IQA    G
Sbjct: 8   HLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAG 67

Query: 191 QTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSL-ESRGCQPDVIS 231
             D AM +LD+M                   +C+   V QA      + E+  C PDV++
Sbjct: 68  DLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVA 127

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           YN L+      G  +    +   +   G  +PN V++  L+  LC+  +  DA+ V +  
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              GL  D    + LI   C+ G L  A   L +M +  C  D   Y  ++ A C+ G  
Sbjct: 188 LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM 247

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +     E     GC  +  +YN +       G    A  +    ++K   PD  TYN L
Sbjct: 248 HEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLL 307

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+ LC+   ++EA+ L  + E       V +Y+ ++  F K  R  +++EV   M + GC
Sbjct: 308 IA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGC 366

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
            P+   Y +LI  +G  G   EA+EL
Sbjct: 367 MPDTVVYNVLISCLGKQGKVDEALEL 392



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 3/287 (1%)

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A    + L   G   D  +   +++ +  +G+ E   +L+ E+  +G+  + VT +  I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 273 SLCRDGKTEDAVDVLRAAKEKGL-TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GC 330
           +  R G  + A+ +L   +      PD  ++   +   C+  R++ A+   D M     C
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRAL 389
            PD+V YNT++A +CK G+ D+AL++F +L   G C PN  S++T+   L        AL
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  EML  G++ D    N+LI C CR GM+ +A  LL  M +        +Y I++   
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           C+  +++E    +      GC  +   Y  +I+G    G  AEA +L
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 11/186 (5%)

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL  ++ L   G P +  +   M   +   G       +++E+  KG+   E+T    I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 413 CLCRDGMVDEAVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAAMFEK-GC 470
              R G +D A+G+L DM    F +P  +++   +   C+ RR+ +++ +   M E   C
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANAL-----VSMHAISRDTFK----RLNRTFPLL 521
            P+   Y  LI G    G    A+++   L        +A+S DT      +++R    L
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 522 DVYKEI 527
            V++E+
Sbjct: 182 AVFQEM 187


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 21/469 (4%)

Query: 36  KETQFMKLIKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           K  + M+ +  SF   G+  E++  +  M   G  P+      +IK   +      A  +
Sbjct: 133 KACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELL 192

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            E +   G +PD  +Y  ++  +CK   I  A+K L  +  RGF  D  T+ ++I     
Sbjct: 193 FEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSG 252

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
           +G    A   F +L+    +P +I +T +I+                  G+CK+G + QA
Sbjct: 253 KGYTTRALWYFRRLVDMGLEPNLINFTCMIE------------------GLCKRGSIKQA 294

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILIS 272
           F+ +  +  +G +P+V ++  L+  L   G  E+  +L  +++ S   +PNV+TY+ +IS
Sbjct: 295 FEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 354

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             CR+ K   A  +L   KE+GL P+  +Y  LI  +CK G  + A + ++ M S+G  P
Sbjct: 355 GYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSP 414

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++  YN I+   CK G   +A ++ E     G  P+  +YN + S      +  +AL + 
Sbjct: 415 NLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALF 474

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
           ++ML  GI+PD  +Y +LI+  CR+  + E+     +       PT  +Y  +I G+C+ 
Sbjct: 475 NKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCRE 534

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +  +++    + + GC P+  TY  +I G+     R EA  L ++++
Sbjct: 535 GNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMI 583



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 195/405 (48%), Gaps = 20/405 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G   E+  ++  M+  G   D    T +I +F  +  + +A+     L   G EP++ 
Sbjct: 217 KIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLI 276

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +  +I G CK   I+ A ++L+ +  +G+ P+V T+  +I  LC +G  E AF++F +L
Sbjct: 277 NFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336

Query: 168 LR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +R +N KP V+TYT +I     E + ++A  LL  M                  + +G  
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRM------------------KEQGLV 378

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+  +Y  L+      G +E    LM  M S G  PN+ TY+ +++ LC+ G+ ++A  +
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKM 438

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L    + GL PD ++Y+ L+S +CK   +  A+   + M+  G  PDI +Y T++A FC+
Sbjct: 439 LEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCR 498

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
                ++   FE+   +G  P   +Y +M       G+   A+     +   G  PD IT
Sbjct: 499 ENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSIT 558

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           Y ++IS LC+    DEA  L   M      P  ++   +   +CK
Sbjct: 559 YGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 140/269 (52%), Gaps = 1/269 (0%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           ++ +   +G+ +E  +++ EM ++GL PN  T + +I      G  E A  +      +G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD+ SY  ++  YCK G +  A ++L  M+  G + D   +  I++ F   G   +AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             F +L D+G  PN+ ++  M   L   G   +A  M+ EM+ KG +P+  T+ SLI  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 415 CRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           C+ G  ++A  L + +  S   +P V++Y  +I G+C+  ++N +  +L+ M E+G  PN
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVS 502
             TY  LI+G    G    A +L N + S
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSS 409



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 59/116 (50%)

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ M+ EM ++G+ P+  T N +I      G+V+ A  L  +M     +P  ISY ++++
Sbjct: 154 AVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVV 213

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            +CK   I E+ + L+ M E+G   +  T+ L+I      G+   A+     LV M
Sbjct: 214 MYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDM 269


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 232/475 (48%), Gaps = 27/475 (5%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
           H L++  + + ++K       AG  D++L   + M  + C+   +   + I    ++ + 
Sbjct: 8   HRLAYRAQISSYVK-------AGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRF 60

Query: 89  NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
           + A +  + +   G   + F Y+  ISG CK     L  K+L+ +   G+ PD+  YNI 
Sbjct: 61  DLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIY 120

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           +  LC    ++ A  V   ++    +P ++TYTI+I      G+ D A+++   M     
Sbjct: 121 LNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGF 180

Query: 203 ------------GMCKKGMVGQAFQF-VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                       G+C  G V  A++  V ++  R      I YN L+      G  ++ +
Sbjct: 181 SPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSI-YNSLINGFCQAGWIDKAQ 239

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            +++ M   G EP++VTY++L++  C +   E+A ++++  +  G+ PD YSY+ L+   
Sbjct: 240 SIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGL 299

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK  RLD A   +   +    L D+V+YNTI+ A C   +  +A ++FE++   G  P+V
Sbjct: 300 CKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDV 359

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            ++  +  A    G    A  ++ +M   G+ PD + Y +++  LC+ G +  A  +  D
Sbjct: 360 VTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCD 419

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           M  +   P V+SYN +I G C+  R++E++ +   M   G  P+E T+ L+I G+
Sbjct: 420 MVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGL 474



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 227/464 (48%), Gaps = 23/464 (4%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           T+ N  + S D     + + I    R  +FD +  + + M+  G   +    ++ I    
Sbjct: 36  TKSNCRVFSID-----YNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLC 90

Query: 84  QERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           + +      +++E +++ G  PD++AYN  ++  C  NQ+++A  V+  +  +G  PD+V
Sbjct: 91  KVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIV 150

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL-LDE 201
           TY I+I  LC  G  +SA +++  ++R    P       L+     +G+ D A +L +  
Sbjct: 151 TYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGA 210

Query: 202 M----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
           M                G C+ G + +A   +  +   GC+PD+++YN+LL    +    
Sbjct: 211 MRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLL 270

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           EE E LM +M   G+EP+V +Y+ L+  LC+  + + A  ++    E     D  SY+ +
Sbjct: 271 EEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTI 330

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           I A C       A +  + M   G  PD+V +  ++ AF + G+++ A ++ ++++ +G 
Sbjct: 331 IKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGL 390

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+   Y T+   L  +G    A  +  +M+  GI PD ++YN+LI+ LCR   V EA+ 
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMH 450

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L  DM +    P  +++ +II G    ++++ +  V   M EKG
Sbjct: 451 LYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKG 494



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 24/355 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA----VRVMEILEKYGEP 104
           RAG+FD ++    +MV  G  PD   C  L+     + K + A    V  M    K+ + 
Sbjct: 161 RAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKS 220

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
               YN+LI+GFC+A  I+ A  ++  +R  G  PD+VTYN+++   C   ++E A  + 
Sbjct: 221 ---IYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLM 277

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKA-MKLLDEM----------------GMCKK 207
            ++ R   +P V +Y  L++      + DKA M ++++M                 +C  
Sbjct: 278 KKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTA 337

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
               +A++    +  +G  PDV+++ +L++  L  G     +KL+ +M   GL P+ V Y
Sbjct: 338 SHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLY 397

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + ++  LC+ GK   A  V     E G+TPD  SY+ LI+  C+  R+  A+   + M +
Sbjct: 398 TTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHT 457

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            G  PD V +  I+           A  +++++ + G   + +   T+ +A+ S+
Sbjct: 458 GGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSN 512



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 106/239 (44%)

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R L  + + Y   ISS  + G  + A+       +      +  Y+  I    +  R DL
Sbjct: 3   RSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDL 62

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A ++ D MI  G   +   Y+  ++  CK  N     ++ E +  +G  P++ +YN   +
Sbjct: 63  AEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN 122

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L        ALG++  M+ KG EPD +TY  +I+ LCR G  D AV +  +M    F P
Sbjct: 123 LLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSP 182

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
              +   ++LG C   +++ + E+         K +++ Y  LI G    GW  +A  +
Sbjct: 183 DEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSI 241



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%)

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y   ++++ K G  DQAL+ F++++   C      YN     L        A      M+
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
            +G   +  TY+  IS LC+         LL DM+   + P + +YNI +   C   +++
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            ++ V+  M EKG +P+  TY ++I G+   G    A+E+   +V
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 196/404 (48%), Gaps = 27/404 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAF 161
           PDV  Y  L++G CKA ++  A +VLD +  +     PDVVT N ++  LC  G ++ A 
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 162 KVFDQLLR--DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
              +Q +     C P  +TY  LI A    G    A +L+++M                 
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPD----VISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           G+C+ G  G A +F R  E R   P+     ++Y+ L+  LL+        +L  E +S 
Sbjct: 290 GLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+ + Y  +IS L + G+ EDA  +  + KE G   D  +Y+ LI+ +C+  RL  A
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E L  M   G  PD+  YNT+L+  CK G+     E+  K+ D GC P+V ++ T+   
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
               G    AL ++  M   GI P+ + YN+LI  LC+ G VD A+ L  +M+       
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           V ++N ++ G        ++ E++  M E+ C P+  T  +L+E
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 24/397 (6%)

Query: 49  RAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYG-E 103
           +AG+  ++L  ++ M       +PDVV    ++    +  +  +A+  +E  +   +G  
Sbjct: 184 KAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   YN LI  FC+   I +A ++++++ + G   ++VT N ++G LC  G   +A + 
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303

Query: 164 F--DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           F   + +    K   +TY+ L+ A +       AM+L  E                  G+
Sbjct: 304 FREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            + G +  A     S++  G + D  +YN+L+       +  E  +L+ EM   G+ P+V
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+S  C+ G      ++L    + G  P   ++  L+  YCK G++D A+  L  
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS 483

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+ V YNT++   CK G+ D A+E+F+++ +   P NV+++N +   L     
Sbjct: 484 MDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNM 543

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             +A  ++ +M  +   PD +T + L+  L   G  D
Sbjct: 544 PEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETD 580



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 9/288 (3%)

Query: 223 RGC---QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRD 277
           +GC   +PDV++Y +L+  L   G+  +  +++  M  + L+  P+VVT + ++  LC+ 
Sbjct: 163 QGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKS 222

Query: 278 GKTEDAVDVL--RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           G+ ++A+  +  R +   G  P+  +Y+ LI A+C+ G + +A E ++ M ++G   +IV
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDKIRALGMIS 393
             NTI+   C+ G    ALE F +   V      N  +Y+T+  AL  + +   A+ +  
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E +S+G  PD I Y ++IS L + G +++A  +   M+   F+    +YNI+I GFC+ +
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           R++E+ E+L  M E G +P+  TY  L+ G    G  A   EL   ++
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 34/162 (20%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK DE+L  + SM  +G  P+ V+                         
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI------------------------- 495

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN LI   CK   ++LA ++ D ++ +    +V T+N ++  L  + M E 
Sbjct: 496 ---------YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           AF++ DQ+  + C P  +T  +L++   + G+TD+  + + +
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 216/451 (47%), Gaps = 55/451 (12%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK----YGE-------------- 103
           S+V  G K D    T L  K F+  K ++ VR+  +L      YGE              
Sbjct: 9   SVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAG 68

Query: 104 -----------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
                            P VF YN +I+G C+A+++  A KVL+++      P+V TY I
Sbjct: 69  MANQALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTI 128

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
           ++  LC     + A +VF ++ R+ CKP  ITY  LIQ     G+ D+A++++ E     
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188

Query: 203 -------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+CK   +  A +F+  +   G +P+ ++Y+ L+      G+ +   
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 250 KLMTEMISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           +   E  +R G       Y   + +LC+ G  + A   +   ++ G+ PD  +Y  LI+ 
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           + + G+ D ++E L+ M  +G  PD+V Y+T++   CK      A  + E +   G PPN
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLL 427
           V +YN++   L  SG K+  +  + EM+ K    PD +TY+ +++ L + GM+D AV L 
Sbjct: 369 VVTYNSVMDGLCKSG-KMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINES 458
             ++S+R  P   +Y+++I   C+  ++ E+
Sbjct: 428 ELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 241/513 (46%), Gaps = 33/513 (6%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V    F  L  + FR  KF E +     + + G          ++        +N+A+ +
Sbjct: 17  VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +  L     P VF YN +I+G C+A+++  A KVL+++      P+V TY I++  LC  
Sbjct: 77  VRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A +VF ++ R+ CKP  ITY  LIQ     G+ D+A++++ E             
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ------------ 184

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              RSLE      DVI+   ++  L    + ++  K M EM   G+ PN VTYS L+   
Sbjct: 185 ---RSLE---LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238

Query: 275 CRDGKTEDAVDVLRAAK-EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            + G+ +  +      K  KG + +A +Y   + A CK G LD A + ++ +   G +PD
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y+ ++  F + G  D +LE+ E +   G  P+V +Y+T+ + L        A  ++ 
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M + G  P+ +TYNS++  LC+ G +DE   +   M  +R  P V++Y+II+ G  K  
Sbjct: 359 LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAG 418

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA------MELA-------NAL 500
            ++ ++++   +      P+   Y ++I  +   G   EA      ME+         AL
Sbjct: 419 MLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRAL 478

Query: 501 VSMHAISRDTFKRLNRTFPLLDVYKEISHLATK 533
             + A   D  KR +    +++V +E  H  TK
Sbjct: 479 AGLVAALCDA-KRTDSARRIVEVARERGHRVTK 510



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           RS+   G + D  ++ +L   L    K+ E  +L T + SRG+     TY +++  LC  
Sbjct: 8   RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 278 GKTEDAVDVLRAAKEKGL-TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           G    A++++R  +  G+ TP  + Y+ +I+  C+  R+  A + L+ M+ +  +P++  
Sbjct: 68  GMANQALELVR--ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  +L   C++     A E+F+++   GC PN  +Y T+   L  +G+   AL ++ E  
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQR 185

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           S  +  D IT  +++  LC+   +D+A+  + +M     RP  ++Y+ ++ GF
Sbjct: 186 SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 191/392 (48%), Gaps = 24/392 (6%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  L+ GFCKA + + A ++LD ++S G  P+VV +  +I  LC+ G +  A   F ++
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             D C P V TY+IL+ A    GQ  +A  L+ EM                 G  K   +
Sbjct: 92  GED-CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +    ++ +  RGC+ DVI+Y M+L         +E  +L+  +  R    NVVTY+ L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSL 206

Query: 271 ISSL--CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++L      +T +A+ +L    ++G  P+  +Y  ++   CK+ RLD A + L  M S 
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC  D V+Y  ++ AF   G    +LE+  ++   G   +  + N +      +GD   A
Sbjct: 267 GCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   M  +G  P  +TYN+LI   C+    D AV LL  M    F+P VI+YN II  
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           FC+ +R  E+  +   M + GC P+  +Y  L
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 24/418 (5%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L S+ V E  +  L++   +AG+F ++L  ++ M +NG +P+VV+ T +I+      K +
Sbjct: 23  LGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVS 82

Query: 90  KAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           +A+     + +   P+V+ Y+ L+   CK+ Q   A  ++  +  +G SP+VVTYN +I 
Sbjct: 83  QALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALID 142

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
                  ++    +  ++ +  C+  VITYT+++                     CK   
Sbjct: 143 GFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDI------------------FCKNNS 184

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM--GKWEEGEKLMTEMISRGLEPNVVTY 267
           + +A++ + +LE R    +V++YN L   L      +  E   L+ +MI  G  PN V Y
Sbjct: 185 IDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNY 240

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             ++  LC++ + ++A  VL +   +G   D  SY  L+ A+   GR   ++E L  M+ 
Sbjct: 241 RTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLG 300

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G + D    N ++  FCK G+  +A ++F+ +   G  P+  +YNT+  A   +     
Sbjct: 301 SGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDT 360

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           A+ ++ +M+    +P+ ITYNS+I   CR+   +EA G+   M  +   P  +SY  +
Sbjct: 361 AVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 161/306 (52%), Gaps = 7/306 (2%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G CK G   QA + +  ++S G +P+V+ +  ++R L   GK  +   L    I     P
Sbjct: 39  GFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLHFRRIGEDCAP 97

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV TYSIL+ +LC+ G+  +A  ++    +KG +P+  +Y+ LI  + K  RLD  +  L
Sbjct: 98  NVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLL 157

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   GC  D++ Y  IL  FCKN + D+A  +   L       NV +YN++F+AL ++
Sbjct: 158 KEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTA 213

Query: 383 -GDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            GD+   AL ++ +M+ +G  P+++ Y +++  LC++  +DEA  +L+ M S   +   +
Sbjct: 214 EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDV 273

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SY I+++ F    R  +S+E+L  M   G   +  T  ++I      G   EA +L  ++
Sbjct: 274 SYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSM 333

Query: 501 VSMHAI 506
               +I
Sbjct: 334 CQRGSI 339



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 34/295 (11%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +L+  ++  +   G +     +      N V+Y IL+   C+ G+ + A+++L   K  G
Sbjct: 1   MLQIFVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG 60

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + P+   +  +I   C  G++  A+      I + C P++  Y+ ++ A CK+G   +A 
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFR-RIGEDCAPNVYTYSILVDALCKSGQPHEAY 119

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +  ++   GC PNV +YN +             L ++ EM  +G   D ITY  ++   
Sbjct: 120 GLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIF 179

Query: 415 CRDGMVDEAVGLLVDMESTRF---------------------------------RPTVIS 441
           C++  +DEA  LL  +E                                     RP  ++
Sbjct: 180 CKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVN 239

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           Y  ++L  CK  R++E+ +VL +M+ +GCK ++ +Y +L+      G   +++EL
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLEL 294



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V+Y  ++  FCK G   QALE+ +++   G  PNV  + T+   L ++G   +AL +   
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFR 89

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
            + +   P+  TY+ L+  LC+ G   EA GL+ +M      P V++YN +I GF K  R
Sbjct: 90  RIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++E + +L  M ++GC+ +  TY ++++         EA  L NAL   + ++ ++ 
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSL 206


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 229/546 (41%), Gaps = 88/546 (16%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    +A +  +S    + +   G  PDV + + +I  F +  + + A+ +   +EK G
Sbjct: 227 LLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLG 286

Query: 103 -EPDVFAYNALISGFCKAN-----------------------------------QIELAN 126
             P+V  YN +I G CK+                                    +I+ AN
Sbjct: 287 VAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEAN 346

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
            VL  +   GF P+ V YN +I   C  G I  A K+ D +L     P  +T   LIQ  
Sbjct: 347 CVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGF 406

Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
               Q  +A  +L+EM                  +C K     A  F+R +  R  +P+ 
Sbjct: 407 CKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPND 466

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
                L+  L   GK  E  +L   ++ +G  PN+VT + LI  LC+ G  ++ + +LR 
Sbjct: 467 GLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRD 526

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E+GL  D  +Y+ LIS  CK+G++    E  + M+  G  PDI  +N +L   C    
Sbjct: 527 MLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADK 586

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  ++ +    G  PNV +Y  M      +        +++E++SK +E + + YNS
Sbjct: 587 IDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNS 646

Query: 410 LI--------------------------SC---------LCRDGMVDEAVGLLVDMESTR 434
           LI                          SC         LC  G+VD+A  LL +M    
Sbjct: 647 LIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG 706

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
             P V+ Y  II G+ K  ++N+   VL  M      PN+ TY ++I+G    G   EA 
Sbjct: 707 LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAA 766

Query: 495 ELANAL 500
           +L N +
Sbjct: 767 KLLNEM 772



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 235/469 (50%), Gaps = 18/469 (3%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYN 110
           K DE+   ++ M   G  P+ V+   LI  + +    ++A+++ + +L K   P+    N
Sbjct: 341 KIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +LI GFCK++QI  A  VL+ +  RG   +  +++++I  LC +    +A     ++L  
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           N +P     T L+      G+  +A++L   +                 G+CK G + + 
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            + +R +  RG   D I+YN L+      GK +EG +L  EM+ +G++P++ T+++L+  
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LC   K ++A  +    K+ G  P+ Y+Y  +I  YCK  +++     L+ ++S     +
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            V YN+++ A+C NGN + A  + + +   G   + ++Y+++   L + G    A  ++ 
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           EM  +G+ P+ + Y ++I    + G +++   +L +M S    P   +Y I+I GFCK  
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  E+ ++L  M EKG  P+  TY     G+   G   EA ++ + + S
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS 809



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 208/489 (42%), Gaps = 54/489 (11%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F   E  +  LI    + G   E+L   + M++ G  P+ V    LI+ F +  +  +
Sbjct: 355 LGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQ 414

Query: 91  AVRVME------------------------------------ILEKYGEPDVFAYNALIS 114
           A  V+E                                    +L +   P+      L+S
Sbjct: 415 AENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVS 474

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
           G CKA +   A ++  RL  +GF P++VT N +I  LC  G ++   K+   +L      
Sbjct: 475 GLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVF 534

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
             ITY  LI                   G CK+G V + F+    +  +G QPD+ ++N+
Sbjct: 535 DRITYNTLIS------------------GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L N  K +E  +L  E    G  PNV TY ++I   C+  K E+  ++L     K 
Sbjct: 577 LLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKK 636

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           L  ++  Y+ LI AYC +G ++ A    D M S G L     Y++++   C  G  D A 
Sbjct: 637 LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAK 696

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            + +++   G  PNV  Y T+       G   +   ++ EM S  I P++ TY  +I   
Sbjct: 697 HLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGF 756

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C+ G   EA  LL +M      P  ++YN    G CK  ++ E+ +V   M       +E
Sbjct: 757 CKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDE 816

Query: 475 TTYVLLIEG 483
            TY  LI+G
Sbjct: 817 ITYTTLIDG 825



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 217/441 (49%), Gaps = 19/441 (4%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQ 121
           +   G  P +  CT L+    +  +  K+  V + +   G  PDV  ++ +I+ FCK ++
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
            + A  +  ++   G +P+VVTYN +I  LC  G ++ A++  ++++++   P++ITY++
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
            I   +   + D+A  +L EM                     G  P+ + YN L+     
Sbjct: 332 FINGLIKLEKIDEANCVLKEM------------------SELGFVPNEVVYNTLIDGYCK 373

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
           MG   E  K+  +M+S+G+ PN VT + LI   C+  +   A +VL     +GL  +  S
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           +  +I+  C   R   A+ F+  M+     P+     T+++  CK G   +A+E++ +L 
Sbjct: 434 FSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLL 493

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             G  PN+ + N +   L  +G+    L ++ +ML +G+  D ITYN+LIS  C++G V 
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           E   L  +M     +P + ++N+++ G C   +I+E+  +     + G  PN  TY ++I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 482 EGIGYGGWRAEAMELANALVS 502
           +G        E   L N LVS
Sbjct: 614 DGYCKANKVEEGENLLNELVS 634



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 181/378 (47%), Gaps = 18/378 (4%)

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A  V   L  +G  P + T   ++ SL     ++ +++V+D +      P V  ++ +I
Sbjct: 204 FAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMI 263

Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
            A     + D A+ L  +M                  E  G  P+V++YN ++  L   G
Sbjct: 264 NAFCKGHREDDAIGLFSKM------------------EKLGVAPNVVTYNNIIHGLCKSG 305

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           + +E  +   +M+   + P+++TYS+ I+ L +  K ++A  VL+   E G  P+   Y+
Sbjct: 306 RLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYN 365

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI  YCK G +  A++  D M+S G  P+ V  N+++  FCK+    QA  + E++   
Sbjct: 366 TLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G P N  S++ + + L      + AL  I EML + + P++    +L+S LC+ G   EA
Sbjct: 426 GLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEA 485

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V L   +    F P +++ N +I G CK   + E++++L  M E+G   +  TY  LI G
Sbjct: 486 VELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISG 545

Query: 484 IGYGGWRAEAMELANALV 501
               G   E  EL   +V
Sbjct: 546 CCKEGKVKEGFELKEEMV 563



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 3/203 (1%)

Query: 303 DPLISAYC---KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
           D L+  Y    K      A +    +   G  P +     +L++  K     ++ E+++ 
Sbjct: 187 DLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDF 246

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   G  P+V  ++TM +A      +  A+G+ S+M   G+ P+ +TYN++I  LC+ G 
Sbjct: 247 ICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGR 306

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           +DEA      M   +  P++I+Y++ I G  K  +I+E+  VL  M E G  PNE  Y  
Sbjct: 307 LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNT 366

Query: 480 LIEGIGYGGWRAEAMELANALVS 502
           LI+G    G  +EA+++ + ++S
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLS 389



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           CIN   N   R+    ++R    LLS       +  L+      G  D++ + ++ M   
Sbjct: 652 CINGNMNAAFRLRDDMKSR--GVLLSC----ATYSSLMHGLCNIGLVDDAKHLLDEMRKE 705

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           G  P+VV  T +I  + +  + NK   V++ +  +   P+ F Y  +I GFCK  + + A
Sbjct: 706 GLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEA 765

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            K+L+ +  +G  PD VTYN     LC  G +E AFKV D++         ITYT LI  
Sbjct: 766 AKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 218/452 (48%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAY 109
           GK +E    I+      C P VV    +I  + ++     A R +  L+  G  P V  Y
Sbjct: 219 GKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETY 278

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+GFCKA + E  +++L  + +RG + +V  +N +I +    G++  A ++  ++  
Sbjct: 279 GALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAE 338

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLD---EMGM--------------CKKGMVGQ 212
             C P + TY I+I  +   G+ ++A +LL+   E G+              CKKG   +
Sbjct: 339 MGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVK 398

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +   G + D++SY   +  ++  G+ +    +  +M+ +G+ P+   Y+IL+S
Sbjct: 399 ASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMS 458

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+ G+      +L    ++ + PD Y +  LI  + ++G LD AI+    +I  G  P
Sbjct: 459 GLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDP 518

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            IV YN ++  FCK G    AL    +++ V   P+  +Y+T+        D   AL M 
Sbjct: 519 GIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMF 578

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+    +P+ ITY SLI+  C+   +  A  +   M+S    P V++Y  ++ GF K 
Sbjct: 579 GQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKA 638

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +   +  +   M   GC PN+ T+  LI G+
Sbjct: 639 GKPERATSIFELMLMNGCLPNDATFHYLINGL 670



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 236/504 (46%), Gaps = 65/504 (12%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A TRP +  L   V  +  +KL+  S+R   F E    +E+M A   KP     + LI  
Sbjct: 84  ASTRPFSCSLD-GVAHSSLLKLLA-SYRV--FPEIELVLENMKAQHLKPTREAFSALILA 139

Query: 82  FFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRL----RSR 135
           + +    ++A+++   + +     P   A N L++G  K+ ++++A ++ D++       
Sbjct: 140 YAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGT 199

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G   D  T +IM+  LC+ G IE   ++        C P V+ Y ++I            
Sbjct: 200 GAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIID----------- 248

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CKKG +  A + +  L+ +G  P V +Y  L+      G++E  ++L+TEM
Sbjct: 249 -------GYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM 301

Query: 256 ISRGLE-----------------------------------PNVVTYSILISSLCRDGKT 280
            +RGL                                    P++ TY+I+I+  C+ G+ 
Sbjct: 302 AARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRI 361

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           E+A ++L  AKE+GL P+ +SY PL+ AYCK G    A   L  +   G   D+V+Y   
Sbjct: 362 EEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAF 421

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG-MISEMLSKG 399
           +      G  D AL + EK+ + G  P+   YN + S L   G +I A+  ++SEML + 
Sbjct: 422 IHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG-RIPAMKLLLSEMLDRN 480

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++PD   + +LI    R+G +DEA+ +   +      P ++ YN +I GFCK  ++ +++
Sbjct: 481 VQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDAL 540

Query: 460 EVLAAMFEKGCKPNETTYVLLIEG 483
             L  M      P+E TY  +I+G
Sbjct: 541 SCLNEMNSVHHAPDEYTYSTVIDG 564



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 221/507 (43%), Gaps = 58/507 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVA-NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           F  LI     +G  D +L    ++   + C P  V    L+    +  K + A+++ + +
Sbjct: 133 FSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKM 192

Query: 99  EKYGEP-----DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +  +      D +  + ++ G C   +IE   +++     +   P VV YN++I   C 
Sbjct: 193 LQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCK 252

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--------- 204
           +G ++ A +  ++L      PTV TY  LI      G+ +   +LL EM           
Sbjct: 253 KGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKV 312

Query: 205 --------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                    K G+V +A + +R +   GC PD+ +YN+++      G+ EE ++L+ +  
Sbjct: 313 FNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAK 372

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAK------------------------ 291
            RGL PN  +Y+ L+ + C+ G    A  +L R A+                        
Sbjct: 373 ERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEID 432

Query: 292 ----------EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
                     EKG+ PDA  Y+ L+S  CK GR+      L  M+     PD+  + T++
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLI 492

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
             F +NG  D+A++IF+ +   G  P +  YN M       G    AL  ++EM S    
Sbjct: 493 DGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHA 552

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PDE TY+++I    +   +  A+ +   M   +F+P VI+Y  +I GFCK   +  + +V
Sbjct: 553 PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV 612

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGG 488
            + M      PN  TY  L+ G    G
Sbjct: 613 FSGMKSFDLVPNVVTYTTLVGGFFKAG 639



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 218/529 (41%), Gaps = 73/529 (13%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +AG+F+     +  M A G   +V +   +I     E K        E+L +  
Sbjct: 281 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID---AEYKYGLVTEAAEMLRRMA 337

Query: 103 E----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E    PD+  YN +I+  CK  +IE A+++L++ + RG  P+  +Y  ++ + C +G   
Sbjct: 338 EMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYV 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  ++     K  +++Y   I   ++ G+ D A+ + ++M                
Sbjct: 398 KASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILM 457

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CKKG +      +  +  R  QPDV  +  L+   +  G+ +E  K+   +I +G++
Sbjct: 458 SGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVD 517

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P +V Y+ +I   C+ GK  DA+  L         PD Y+Y  +I  Y K   +  A++ 
Sbjct: 518 PGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKM 577

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
              M+     P+++ Y +++  FCK  +  +A ++F  +      PNV +Y T+    + 
Sbjct: 578 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFK 637

Query: 382 SGDKIRALGMISEMLSKGIEPDEIT----------------------------------- 406
           +G   RA  +   ML  G  P++ T                                   
Sbjct: 638 AGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFF 697

Query: 407 --------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
                         YNS+I CLC+ G VD A  LL  M +  F    + +  ++ G C  
Sbjct: 698 TMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHK 757

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +  E   +++    K        Y L ++   Y G  +EA  +   LV
Sbjct: 758 GKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLV 806



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 32/328 (9%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    R G+ DE++   + ++  G  P +V    +IK F +  K   A+  + E+ 
Sbjct: 488 FATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMN 547

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             +  PD + Y+ +I G+ K + +  A K+  ++    F P+V+TY  +I   C +  + 
Sbjct: 548 SVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 607

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------CK 206
            A KVF  +   +  P V+TYT L+      G+ ++A  + + M M              
Sbjct: 608 RAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLI 667

Query: 207 KGMVGQA-------------------FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
            G+   A                     F   +   G    + +YN ++  L   G  + 
Sbjct: 668 NGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDT 727

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
            + L+T+M+++G   + V ++ L+  LC  GK+++  +++     K     A  Y   + 
Sbjct: 728 AQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLD 787

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIV 335
            Y   GRL  A   L  ++ D    D V
Sbjct: 788 KYLYQGRLSEASVILQTLVEDSKFSDQV 815


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 196/404 (48%), Gaps = 27/404 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAF 161
           PDV  Y  L++G CKA ++  A +VLD +  +     PDVVT N ++  LC  G ++ A 
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 162 KVFDQLLR--DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
              +Q +     C P  +TY  LI A    G    A +L+++M                 
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPD----VISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           G+C+ G  G A +F R  E R   P+     ++Y+ L+  LL+        +L  E +S 
Sbjct: 290 GLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+ + Y  +IS L + G+ EDA  +  + KE G   D  +Y+ LI+ +C+  RL  A
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E L  M   G  PD+  YNT+L+  CK G+     E+  K+ D GC P+V ++ T+   
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
               G    AL ++  M   GI P+ + YN+LI  LC+ G VD A+ L  +M+       
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           V ++N ++ G        ++ E++  M E+ C P+  T  +L+E
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 24/397 (6%)

Query: 49  RAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYG-E 103
           +AG+  ++L  ++ M       +PDVV    ++    +  +  +A+  +E  +   +G  
Sbjct: 184 KAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   YN LI  FC+   I +A ++++++ + G   ++VT N ++G LC  G   +A + 
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303

Query: 164 F--DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           F   + +    K   +TY+ L+ A +       AM+L  E                  G+
Sbjct: 304 FREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            + G +  A     S++  G + D  +YN+L+       +  E  +L+ EM   G+ P+V
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+S  C+ G      ++L    + G  P   ++  L+  YCK G++D A+  L  
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS 483

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+ V YNT++   CK G+ D A+E+F+++ +   P NV+++N +   L     
Sbjct: 484 MDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNM 543

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
             +A  ++ +M  +   PD +T + L+  L   G  D
Sbjct: 544 PEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETD 580



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 9/288 (3%)

Query: 223 RGC---QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRD 277
           +GC   +PDV++Y +L+  L   G+  +  +++  M  + L+  P+VVT + ++  LC+ 
Sbjct: 163 QGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKS 222

Query: 278 GKTEDAVDVL--RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           G+ ++A+  +  R +   G  P+  +Y+ LI A+C+ G + +A E ++ M ++G   +IV
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDKIRALGMIS 393
             NTI+   C+ G    ALE F +   V      N  +Y+T+  AL  + +   A+ +  
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E +S+G  PD I Y ++IS L + G +++A  +   M+   F+    +YNI+I GFC+ +
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           R++E+ E+L  M E G +P+  TY  L+ G    G  A   EL   ++
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 34/162 (20%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK DE+L  + SM  +G  P+ V+                         
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI------------------------- 495

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN LI   CK   ++LA ++ D ++ +    +V T+N ++  L  + M E 
Sbjct: 496 ---------YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           AF++ DQ+  + C P  +T  +L++   + G+TD+  + + +
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 255/535 (47%), Gaps = 56/535 (10%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           ++VV+ I     +  RVSS+A          F +    +  LI     +G++ E++   +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
            M  +GCKP ++    ++  F +     NK   ++E ++  G  PD + YN LI+   + 
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           +  + A +V + +++ GFS D VTYN ++         + A KV ++++ +   P+++TY
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
             LI A   +G  D+AM+L ++M                 G  + G V  A      + +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
            GC+P++ ++N  ++   N GK+ E  K+  E+   GL P++VT++ L++   ++G   +
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
              V +  K  G  P+  +++ LISAY + G  + A+     M+  G  PD+  YNT+LA
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL---------GMI- 392
           A  + G  +Q+ ++  ++ D  C PN  +Y ++  A +++G +I  +         G+I 
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANGKEIGLMHSLAEEVYSGVIE 591

Query: 393 --------------------------SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
                                     SE+  +G  PD  T NS++S   R  MV +A G+
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           L  M+   F P++ +YN ++    ++    +S E+L  +  KG KP+  +Y  +I
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 240/511 (46%), Gaps = 31/511 (6%)

Query: 5   VSCINPKSNERVRVSSSAETRPNT------HLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
           +S    ++  R R+  S +  PN       H LS   ++     LI+ +F +G+ D  L 
Sbjct: 65  ISSQTSRNRNRTRIGKSRD--PNLGKPWSYHGLSPQGQQV-LRSLIEPNFDSGQLDSVLS 121

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA----LIS 114
            +     +  +         +K     +K + A+R  +   K  +      N+    +IS
Sbjct: 122 ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIIS 181

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
              K  ++  A  + + L+  GFS DV +Y  +I +  + G    A  VF ++  D CKP
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241

Query: 175 TVITYTILIQATMLEGQT-DKAMKLLDEMGM----------------CKKGMVGQ-AFQF 216
           T+ITY +++      G   +K   L+++M                  CK+G + Q A Q 
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              +++ G   D ++YN LL       + +E  K++ EM+  G  P++VTY+ LIS+  R
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           DG  ++A+++     EKG  PD ++Y  L+S + + G+++ A+   + M + GC P+I  
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N  +  +   G   + ++IF++++  G  P++ ++NT+ +    +G      G+  EM 
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G  P+  T+N+LIS   R G  ++A+ +   M      P + +YN ++    +     
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
           +S +VLA M +  CKPNE TY  L+     G
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 222/470 (47%), Gaps = 20/470 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F   +  +  L+    ++ +  E++  +  MV NG  P +V    LI  + ++   ++A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  ++ EK  +PDVF Y  L+SGF +A ++E A  + + +R+ G  P++ T+N  I   
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
            +RG      K+FD++      P ++T+  L+      G   +   +  EM         
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                      + G   QA    R +   G  PD+ +YN +L  L   G WE+ EK++ E
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDG 313
           M     +PN +TY  L+ +   +GK    +  L      G + P A     L+    K  
Sbjct: 550 MEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
            L  A      +   G  PDI   N++++ + +     +A  + + + + G  P++++YN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           ++      S D  ++  ++ E+L+KGI+PD I+YN++I   CR+  + +A  +  +M ++
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
              P VI+YN  I  +       E+I V+  M + GC+PN+ TY  +++G
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 191/447 (42%), Gaps = 55/447 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R G  DE++     M   G KPDV   T L+  F +  K   A+ + E + 
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P++  +NA I  +    +     K+ D +   G SPD+VT+N ++      GM  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
               VF ++ R    P   T+  LI A    G  ++AM +   M                
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK----------------- 244
             + + GM  Q+ + +  +E   C+P+ ++Y  LL    N GK                 
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVI 590

Query: 245 -------------------WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
                                E E+  +E+  RG  P++ T + ++S   R      A  
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           VL   KE+G TP   +Y+ L+  + +      + E L  +++ G  PDI++YNT++ A+C
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +N     A  IF ++ + G  P+V +YNT   +  +      A+G++  M+  G  P++ 
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMES 432
           TYNS++   C+    DEA   + D+ +
Sbjct: 771 TYNSIVDGYCKLNRKDEAKLFVEDLRN 797



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 53/377 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F   IK     GKF E +   + +   G  PD+V    L+  F Q    ++   V + ++
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+   +N LIS + +    E A  V  R+   G +PD+ TYN ++ +L   GM E
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATM------------------------------- 187
            + KV  ++    CKP  +TY  L+ A                                 
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601

Query: 188 -------LEGQTDKAMKLLDEMGMC--------------KKGMVGQAFQFVRSLESRGCQ 226
                  L  + ++A   L E G                ++ MV +A   +  ++ RG  
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P + +YN L+        + + E+++ E++++G++P++++Y+ +I + CR+ +  DA  +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               +  G+ PD  +Y+  I +Y  D   + AI  + YMI  GC P+   YN+I+  +CK
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781

Query: 347 NGNADQALEIFEKLSDV 363
               D+A    E L ++
Sbjct: 782 LNRKDEAKLFVEDLRNL 798



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 5/200 (2%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           +IS   K+GR+  A    + +  DG   D+ +Y ++++AF  +G   +A+ +F+K+ + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 365 CPPNVSSYNTM---FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           C P + +YN +   F  + +  +KI +L  + +M S GI PD  TYN+LI+C  R  +  
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSL--VEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA  +  +M++  F    ++YN ++  + K+ R  E+++VL  M   G  P+  TY  LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356

Query: 482 EGIGYGGWRAEAMELANALV 501
                 G   EAMEL N + 
Sbjct: 357 SAYARDGMLDEAMELKNQMA 376


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 18/397 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+ F Y +LI G C   +      ++D +  RG    V  + ++I  LC  GM+  A ++
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           FD+++    +P ++T T L+    L+G  D A +L D +G                    
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG------------------EW 319

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G + DV +YN+ +     +G+  +  ++  EM   G+ PN+VTY+ LI  LC+ G+   A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            ++++     GLTPD  +   L+   CK  RLD AI   + ++  G  PD+ +Y  ++  
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +    +A+ +   +      P++ +Y+ +   L  SG    A  +++EM  KG  PD
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY+ L+  L +   +DEAV L   M      P V+ Y I+I G+CK+ RI+E+I +  
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M  K   P+  TY +L   +   G  +   +  N +
Sbjct: 560 EMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVI 596



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 26/413 (6%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           +IL++    D  A N ++ G C    +  A +  D + + GFS + V+Y I+I  LC  G
Sbjct: 97  KILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENG 156

Query: 156 MIESAFKVFDQLLRDN--------CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
            +  A  +   + ++          K  V+ Y+I+I                    +C+ 
Sbjct: 157 RVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDC------------------LCRN 198

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G V + F+F   +   G  P+  +Y  L+R L  +GK+ EG  L+ EMI RGL+ +V  +
Sbjct: 199 GFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVF 258

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           ++LI  LC++G   +A ++      +G  P+  +   L+  YC  G +D+A E  D +  
Sbjct: 259 TVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGE 318

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G   D+  YN  +  +CK G    A+ +F+++   G  PN+ +YN++   L  +G+   
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSG 378

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  ++  M   G+ PD +T   L+  LC+   +D+A+ L   +  +   P V SY I+I 
Sbjct: 379 AWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIH 438

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           G C +RR+ E++ +L  M  K   P+  TY  LI+G+   G  + A  L N +
Sbjct: 439 GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEM 491



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 169/359 (47%), Gaps = 18/359 (5%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
             DV    F  LI    + G   E+    + MV  G +P++V CT L+  +  +   + A
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA 309

Query: 92  VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
             + + + ++G + DV+ YN  I G+CK  ++  A +V D +   G  P++VTYN +I  
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC  G +  A+++   + R    P ++T  IL+       + D+A+ L +++        
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G C    +G+A   +R +  +   P +++Y+ L+  L   G+     +L+ 
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 489

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM  +G  P+ +TYSIL+ +L +    ++AV +     ++GL PD   Y  +I  YCK  
Sbjct: 490 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           R+D AI     M     +PDIV Y  +  A  K+G+     +    + D+  PP V  Y
Sbjct: 550 RIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G +  +      ++  G   D V  NT+L   C NG   +ALE  +++ + G   N  SY
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 373 NTMFSALWSSG---DKIRALGMISEMLSKG-----IEPDEITYNSLISCLCRDGMVDEAV 424
             + + L  +G   + +  L MI +   K      ++ + + Y+ +I CLCR+G VDE  
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               +M      P   +Y  +I G C   +  E   ++  M  +G   +   + +LI+G+
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 485 GYGGWRAEAMELANALVS 502
              G   EA E+ + +V+
Sbjct: 266 CKNGMLVEAREMFDEMVN 283



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 3/165 (1%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R+  +     + HL +       +  LI    R+G+   +   +  M   G  PD +  +
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYS 504

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
            L+   ++++  ++AV +   + K G EPDV  Y  +I G+CK+ +I+ A  +   +  +
Sbjct: 505 ILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMK 564

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITY 179
              PD+VTY I+  ++   G     +K F  ++RD N  P V+ Y
Sbjct: 565 NLVPDIVTYTILFNAVFKSGSNSYEWK-FVNVIRDINPPPRVLKY 608


>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 214/441 (48%), Gaps = 31/441 (7%)

Query: 71  DVVMCTKLIKKF----------------FQERKSNKAVRV-MEILEKYGEPDVFAYNALI 113
           D+ +CT LIKK+                 + R S++A  V ME+  K  + D+FAYN L+
Sbjct: 222 DLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLL 281

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
               K  Q++ + KV   ++ +  +PD  TY IMI      G  E +  +F+++L   C 
Sbjct: 282 DALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCT 341

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM--GMCKKGMV------------GQAFQFVRS 219
           P +I Y  +IQA    G  DKA+ L   M    C+                GQ  +    
Sbjct: 342 PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV 401

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           LE      +   Y  L+RTL  +G   E  +L   M S     +   Y  ++ SLCR GK
Sbjct: 402 LEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGK 461

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           T +A+++L    EKG++ D   Y+ ++S   K  ++    +  + M  DG  PDI  YN 
Sbjct: 462 TVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNI 521

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           ++++  + G   +A+E+FE+L    C P++ SYN++ + L  +GD   A     EM  KG
Sbjct: 522 LISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKG 581

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + PD +TY++LI C  +   V+ A  L   M +    P +++YNI++    +  R  E++
Sbjct: 582 LNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETV 641

Query: 460 EVLAAMFEKGCKPNETTYVLL 480
           ++ A + E+G  P+  TY +L
Sbjct: 642 DLYAKLREQGLTPDSITYAIL 662



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 182/430 (42%), Gaps = 85/430 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           L++   R+   D +      M + G + D+     L+    ++ + +++ +V + ++ K+
Sbjct: 245 LLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKH 304

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD + Y  +I    K  + E +  + + + ++G +P+++ YN MI +L   GM++ A 
Sbjct: 305 CNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAI 364

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLE-------------------------------- 189
            +F  ++++NC+P   TY+I++   + E                                
Sbjct: 365 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKL 424

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G + +A +L   M                  +C+ G   +A + +  +  +G   D + Y
Sbjct: 425 GHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMY 484

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA--- 289
           N +L TL  + +      L  +M   G  P++ TY+ILISSL R GK ++AV+V      
Sbjct: 485 NTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELES 544

Query: 290 --------------------------------AKEKGLTPDAYSYDPLISAYCKDGRLDL 317
                                            ++KGL PD  +Y  LI  + K  ++++
Sbjct: 545 SDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEM 604

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A    D MI+ GC P+IV YN +L    + G   + ++++ KL + G  P+  +Y  +  
Sbjct: 605 ARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDR 664

Query: 378 ALWSSGDKIR 387
               S  K R
Sbjct: 665 LQSGSNRKFR 674



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 162/380 (42%), Gaps = 39/380 (10%)

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIE---SAFKVFDQLLRDNCKPTVITYTILIQA 185
           +DR + RG    + T NI+I    S   +E      K +D  LR N      TY  L+QA
Sbjct: 198 MDRDQIRG---TISTVNILIKIFSSNEDLELCTGLIKKWD--LRLN----AYTYRCLLQA 248

Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
            +    +D+A  +  EM                   S+G Q D+ +YNMLL  L    + 
Sbjct: 249 HIRSRDSDRAFNVYMEMW------------------SKGYQLDIFAYNMLLDALAKDEQL 290

Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
           +   K+  +M  +   P+  TY+I+I    + G+ E+++ +      KG TP+  +Y+ +
Sbjct: 291 DRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM 350

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA---DQALEIFEKLSD 362
           I A  K G +D AI     MI + C P+   Y+ IL      G     D+ LE+  K   
Sbjct: 351 IQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFI- 409

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
                N S Y  +   L   G    A  +   M S     D   Y S++  LCR G   E
Sbjct: 410 -----NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVE 464

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  +         + YN ++    K ++++   ++   M + G  P+  TY +LI 
Sbjct: 465 AIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILIS 524

Query: 483 GIGYGGWRAEAMELANALVS 502
            +G  G   EA+E+   L S
Sbjct: 525 SLGRVGKVKEAVEVFEELES 544


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 233/484 (48%), Gaps = 20/484 (4%)

Query: 29  HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
            L  + + +  +   I    R G++++++  +  M   G  PD+   + +I    +  + 
Sbjct: 25  KLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQW 84

Query: 89  NKAVR-VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM 147
             AV  +ME+  K   PD  +Y A I+   +  + ++A  +L  + +R  +P+V+ YN  
Sbjct: 85  KMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSA 144

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKK 207
           I S    G  E A  +  ++      P VI+Y+  I A    G+ ++A++L ++M     
Sbjct: 145 INSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDM----- 199

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
                         + G  PDVI+Y   +    N G+W+E   L+ ++ + GL PNV++Y
Sbjct: 200 -------------RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISY 246

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S +I++  ++G+ + A+D+LR  K   L P+  +Y+  I A  K GR   AI+ L  M +
Sbjct: 247 SSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPT 306

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G  PD+V+Y++++ A  K     +A++I  ++  VG  PN  SYN+   A    G    
Sbjct: 307 VGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKE 366

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A G++ EM + G+    I YNS I+   +     EA+ LL +M +     TV SY+  I 
Sbjct: 367 AKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAID 426

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
              K     ++ E+L  M   G  PNE  Y   I+  G G    EA++L   + ++  +S
Sbjct: 427 ACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTV-GLS 485

Query: 508 RDTF 511
            D F
Sbjct: 486 PDVF 489



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 226/473 (47%), Gaps = 21/473 (4%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
           + +  +I    + G++  +++F+  M   G  PD       I    +  +   A+ ++ E
Sbjct: 69  SAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLRE 128

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG- 155
           +L +   P+V  YN+ I+   KA Q E+A  ++  + + G +PDV++Y+  I S C RG 
Sbjct: 129 MLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAI-SACGRGG 187

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             E A ++F+ +      P VITY   I A    G+  +A+ LL ++             
Sbjct: 188 RWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYS 247

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                  K+G    A   +R +++    P++I+YN  +      G+W+E   L+ EM + 
Sbjct: 248 SVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTV 307

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           GL P+VV+YS +I +  +  + ++A+D+LR     GL+P+A SY+  I A  K G+   A
Sbjct: 308 GLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEA 367

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L  M + G    ++ YN+ +AA  K     +AL +  ++  VG    V SY++   A
Sbjct: 368 KGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDA 427

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
                  I+A  ++ EM + G+ P+E+ YNS I    R    +EAV LL +M +    P 
Sbjct: 428 CGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPD 487

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG-WR 490
           V SY+  I    K  +  E++ VL  M   G  P+   Y   I+    GG W+
Sbjct: 488 VFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWK 540



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 214/446 (47%), Gaps = 25/446 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +   I    R G+++E+L   E M  +G  PDV+     I       +  +AV ++  + 
Sbjct: 176 YSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIP 235

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+V +Y+++I+   K  Q ++A  +L  +++   +P+++TYN  I +    G  +
Sbjct: 236 TVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWK 295

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG-MVGQAFQFV 217
            A  +  ++      P V++Y+ +I A                   C KG    +A   +
Sbjct: 296 EAIDLLREMPTVGLPPDVVSYSSVIDA-------------------CSKGDRWKEAIDIL 336

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R + + G  P+ ISYN  +      G+W+E + L+ EM + G+   V+ Y+  I++  + 
Sbjct: 337 REMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKG 396

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL-AIEFLDYMISDGCLPDIVN 336
            + ++A+ +LR     GL    +SY   I A C  G L + A E L  M + G  P+ V 
Sbjct: 397 EQWKEALALLREMPTVGLHTTVFSYSSAIDA-CGKGNLWIKAKELLREMATVGLAPNEVC 455

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR-ALGMISEM 395
           YN+ + A  +    ++A+++  ++  VG  P+V SY++  +A  + GD+ + AL ++ EM
Sbjct: 456 YNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAAC-AKGDQWKEALAVLKEM 514

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            + G+ PD I YNS I    + G    AV LL +M +    P +ISY+  I    +  + 
Sbjct: 515 SAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQW 574

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLI 481
            E I +L  M   G  P+  TY  L+
Sbjct: 575 KEGIALLEEMRGSGVVPDVITYHALM 600



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 220/476 (46%), Gaps = 20/476 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +   I    R G++  +L  +  M+A    P+V++    I    +  +   AV +++ + 
Sbjct: 106 YGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMA 165

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PDV +Y++ IS   +  + E A ++ + +R+ G +PDV+TY   I +  + G  +
Sbjct: 166 TVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWK 225

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +  ++      P VI+Y+ +I A   EGQ   A+ LL EM                
Sbjct: 226 EAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAI 285

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
               K G   +A   +R + + G  PDV+SY+ ++       +W+E   ++ EM + GL 
Sbjct: 286 DACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLS 345

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN ++Y+  I +  + G+ ++A  +LR     G+T     Y+  I+A  K  +   A+  
Sbjct: 346 PNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALAL 405

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L  M + G    + +Y++ + A  K     +A E+  +++ VG  PN   YN+   A   
Sbjct: 406 LREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDAC-G 464

Query: 382 SGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            GD+   A+ ++ EM + G+ PD  +Y+S I+   +     EA+ +L +M +    P +I
Sbjct: 465 RGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLI 524

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            YN  I    K  R   ++ +L  M   G  PN  +Y   I+    GG   E + L
Sbjct: 525 CYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIAL 580



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 4/224 (1%)

Query: 277 DGKTEDAVDVLRAA----KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           D ++ D    LRA     K  G   D  SY   I+A  + G+ + A+  L  M ++G  P
Sbjct: 7   DSRSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAP 66

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D+  Y+ ++ A  K G    A+    ++   G  P+  SY    +A    G    AL ++
Sbjct: 67  DLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLL 126

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EML++ + P+ I YNS I+   + G  + AV L+ +M +    P VISY+  I    + 
Sbjct: 127 REMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRG 186

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            R  E++E+   M   G  P+  TY   I     GG   EA+ L
Sbjct: 187 GRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSL 230


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 222/479 (46%), Gaps = 18/479 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI+   + G  D ++   E +   G KP V  C  ++    +++++     +  E+ 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K   P+V  +N LI+G C    ++ A  +L ++   GF P +VTYN ++   C +G  +
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A ++ D ++    +  V TY + I       ++ KA  LL +M                
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  K+G +G A Q    +      P+ ++YN L+    ++G +EE  +L+  M + GL 
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            N VTY  L++ LC+  K E A  +L   +   +     +Y  LI   CK+G LD A++ 
Sbjct: 406 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 465

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           +  M  DG  PD++ Y++++  FC+ GN   A EI  ++   G   N   Y+T+      
Sbjct: 466 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 525

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G+   A+ + + M   G   D  T N L+S LCRDG + EA   L  M      P  I+
Sbjct: 526 HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 585

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           Y+ II G+        +      M + G  P+  TY  L++G+  GG   EA +  N L
Sbjct: 586 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 644



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 219/527 (41%), Gaps = 67/527 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           + G++  ++  I+ M+  G + DV      I       +S KA  +++ + K    P+  
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF K  +I +A +V + +     SP+ VTYN +IG  C  G  E A ++ D +
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                +   +TY  L+       + + A +LL+ M                 G+CK GM+
Sbjct: 400 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGML 459

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS-- 268
            +A Q V ++   G  PDVI+Y+ L+     +G  +  ++++  M   GL  N + YS  
Sbjct: 460 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 519

Query: 269 ---------------------------------ILISSLCRDGKTEDAVDVLRAAKEKGL 295
                                            +L+SSLCRDGK  +A   L      GL
Sbjct: 520 IYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 579

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
            P++ +YD +I+ Y   G    A  F D MI  G  P    Y ++L   CK GN  +A +
Sbjct: 580 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 639

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
              +L  +    +   YNT+ +    SG+   A+ +  +M+   + PD  TY+SL++ LC
Sbjct: 640 FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 699

Query: 416 RDGMVDEAVGLL-VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           R G    AV L    M      P  + Y  ++ G  K      +      M +KG  P+ 
Sbjct: 700 RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 759

Query: 475 TTYVLLIEGIGYGG-------------WRAEAMELANALVSMHAISR 508
             +  +I+     G             W      LA   + +H  S+
Sbjct: 760 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 20/393 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P VF  + LI  + K   I+ A +  + +   GF P V T N+++ S+      E  + +
Sbjct: 163 PSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 220

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++      P V T+ ILI    +EG   KA  LL +M                  E  
Sbjct: 221 FREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM------------------EEN 262

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P +++YN LL      G+++   +L+  MI +G+E +V TY++ I +LC + ++  A
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L+  +++ ++P+  +Y+ LI+ + K+G++ +A +  + M      P+ V YN ++  
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 382

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  G+ ++AL + + +   G   N  +Y T+ + L        A  ++  M    +   
Sbjct: 383 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 442

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I Y  LI  LC++GM+DEAV L+ +M      P VI+Y+ +I GFC+   I  + E++ 
Sbjct: 443 HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 502

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            M+  G   N+  Y  LI      G   EAM++
Sbjct: 503 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 214/508 (42%), Gaps = 54/508 (10%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            L+    R GK  E+  F+  M   G  P+ +    +I  +        A    + + K G
Sbjct: 554  LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 613

Query: 103  E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            + P  F Y +L+ G CK   +  A K L+RL     + D V YN ++   C  G +  A 
Sbjct: 614  QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 673

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------G 203
             +FD+++++N  P   TY+ L+     +G+   A+ L                      G
Sbjct: 674  ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 733

Query: 204  MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
            + K G    AF F   +  +G  PD +++N ++ +    G+  +     + M   G+ PN
Sbjct: 734  LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 793

Query: 264  VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            + TY+IL+    +       + +      +G+ PD  ++  LI    K G  DL ++ L 
Sbjct: 794  LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853

Query: 324  YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
             MI +G L D   +N ++  + ++G   +A ++   ++ +G  P+  +YN +F+ L    
Sbjct: 854  KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 384  DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES----------- 432
                +  ++ EML  G+ P    Y +LI+ +CR G +  A  L  +ME+           
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 433  ------------------------TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
                                     R  PT+ ++  ++  FC+  +I E++++   M   
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033

Query: 469  GCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G K +   Y +LI G+   G  A A EL
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFEL 1061



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 196/458 (42%), Gaps = 20/458 (4%)

Query: 29   HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
            H +   V    +  L+  + ++G   E++   + MV N   PD    + L+    ++ K+
Sbjct: 645  HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKA 704

Query: 89   NKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
              AV +       G   P+   Y  L+ G  KA   + A    + +  +G  PD V +N 
Sbjct: 705  VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNA 764

Query: 147  MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
            +I S   RG +  A   F  +      P + TY IL+                   G  K
Sbjct: 765  IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH------------------GFSK 806

Query: 207  KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            K  + +      ++   G  PD ++++ L+  L   G  + G KL+ +MI  G   +  T
Sbjct: 807  KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 267  YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
            ++ILI+     GK   A D++      G+ PD  +Y+ + +   K      +   L  M+
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 327  SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             +G +P    Y T++   C+ G+   A ++ +++  +G   +  + + M   L   G   
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 387  RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
             A+ ++  ML   + P   T+ +L+   CRD  + EA+ L   ME    +  V++YN++I
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +G C       + E+   M  +   PN TTY +L++ I
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 163/380 (42%), Gaps = 18/380 (4%)

Query: 70   PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKV 128
            P+ VM T L+    +      A    E + K G  PD  A+NA+I    +  Q+  AN  
Sbjct: 722  PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 781

Query: 129  LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
               +R  G  P++ TYNI++     +  +     ++  ++R+   P  +T+  LI     
Sbjct: 782  FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841

Query: 189  EGQTDKAMKLLDEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVIS 231
             G  D  +KLL +M M                  + G + +AF  V  + + G  PD  +
Sbjct: 842  SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 901

Query: 232  YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            YN +   L     + E   ++ EM+  G+ P    Y  LI+ +CR G  + A  +    +
Sbjct: 902  YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 961

Query: 292  EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
              G      +   ++      G+ + A+  LD+M+    LP I  + T++  FC++    
Sbjct: 962  ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1021

Query: 352  QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            +AL++   +   G   +V +YN +   + ++GD   A  +  EM  + + P+  TY  L+
Sbjct: 1022 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081

Query: 412  SCLCRDGMVDEAVGLLVDME 431
              +     + +   LL D++
Sbjct: 1082 DAISAANNLIQGEKLLTDLQ 1101



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 46/103 (44%)

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G +P   T N +++ + +D   +    L  +M      P V ++NI+I G C    + ++
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +L  M E G  P   TY  L+      G    A+EL + ++
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 225/483 (46%), Gaps = 60/483 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F +L+    +   + +     + M   G  PD++    LI       + N+ +  M  + 
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  PDV  +  LI G C  ++I  A K+  R++  G +P+VVTY  +I  LC+ G I 
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 159 SAFKVFDQLLRD------NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
            A K   ++L D      NC+P VI+Y+I+I                   G+CK G   +
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIID------------------GLCKVGNWEE 255

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A      +  +G QP+V+++++L+  L   G+  + +KL+  MI  G+ PN+ TY+ LI 
Sbjct: 256 AICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIK 315

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C  G    A ++  +   KG  PD  SY+ LI+ YCK  +++ A++  + M+  G  P
Sbjct: 316 GFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWP 375

Query: 333 DIVNYNTILAA-----------------------------------FCKNGNADQALEIF 357
           D+     +L A                                    CKNG   +A+++F
Sbjct: 376 DVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLF 435

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            +L       ++ ++  +   L  +G    A  +  ++  +GI+PD + Y+S+I   C+ 
Sbjct: 436 NELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKK 495

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G VD+A  L   ME     P +I+Y+I++ GF ++ ++ + +++L  M EK   P++  Y
Sbjct: 496 GQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555

Query: 478 VLL 480
            ++
Sbjct: 556 AIV 558



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 207/406 (50%), Gaps = 33/406 (8%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +F++N L++G  K         +  ++   G  PD++T NI+I  LC+   I        
Sbjct: 91  IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            ++R    P V+T+T LI+   +E +  +A KL   M                 G+C  G
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210

Query: 209 MVGQAFQFVRSLESR------GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +  A ++ + + +        C+P+VISY++++  L  +G WEE   L  EM+ +G++P
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP 270

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NVVT+S+LI  LC++G+   A  +L    + G+ P+ ++Y  LI  +C  G L+ A E  
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M S G  PD+++YN ++  +CK    ++A+++F ++  VG  P+V +   +  AL+ +
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISC-----LCRDGMVDEAVGLLVDMESTRFRP 437
           G    A     + L + I+P  +  +  I C     LC++G + EA+ L  ++ES   + 
Sbjct: 391 GKVDDA-----KELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKL 445

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            + ++  +I G CK  ++  + E+   ++E+G +P+   Y  +I G
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 207/435 (47%), Gaps = 59/435 (13%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           + +E L  +  ++  G  PDVV  T LIK    E +  +A ++   ++K G  P+V  Y 
Sbjct: 141 RINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYG 200

Query: 111 ALISGFCKANQIELANK----VLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAFKVF 164
            LI G C    I +A K    +L+      F+  P+V++Y+I+I  LC  G  E A  +F
Sbjct: 201 TLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF 260

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           ++++    +P V+T+++LI     EGQ  KA KLL+ M                 G C  
Sbjct: 261 NEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLV 320

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G +  A +   S+ S+G +PDVISYNML+       K EE  KL  EM+  G+ P+V T 
Sbjct: 321 GDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTS 380

Query: 268 SILISSLCRDGKTEDAVDVLRAAKE--------------KGLTPDAYSYDP--------- 304
            +L+ +L   GK +DA ++ R  K                GL  + Y ++          
Sbjct: 381 GVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELES 440

Query: 305 ------------LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
                       LI   CK G+L+ A E  + +  +G  PD + Y++++  FCK G  D+
Sbjct: 441 YNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDK 500

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  +F+K+ + GC P++ +Y+ +    + S    + + ++  M+ K + PD+  Y  +  
Sbjct: 501 ANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560

Query: 413 CLCRDGMVDEAVGLL 427
            +C+D    E + LL
Sbjct: 561 MVCKDEKYKEWLDLL 575



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 153/307 (49%), Gaps = 13/307 (4%)

Query: 205 CKKGM--VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           CK G   V QA QF   +        + S+N LL  L  +  + +   L  +M   GL P
Sbjct: 70  CKTGSISVTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +++T +ILI+ LC   +  + +  +     +G  PD  ++  LI   C + R+  A +  
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD------VGCPPNVSSYNTMF 376
             M   GC P++V Y T++   C  GN + AL+  +++ +        C PNV SY+ + 
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
             L   G+   A+ + +EM+ +G++P+ +T++ LI  LC++G V +A  LL  M      
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P + +Y  +I GFC    +N + E+  +M  KG +P+  +Y +LI G        EAM+L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364

Query: 497 ANALVSM 503
            N ++ +
Sbjct: 365 FNEMLHV 371


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 187/345 (54%), Gaps = 27/345 (7%)

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRS 219
           TY +L++A  L G+   AM LL EM                   +CK G V +A + V++
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++   C+PDV+++N L+  L   G+ +E ++++ EM   G   N+VTY+ LI+ L   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVNYN 338
           + +AV V++       TPD  +Y+ +I  +CK G +D A  FL+ M    GC PD   Y+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 339 TILAAFCKNGNADQALEIF-EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            ++   CK+ N  +A E+  E +    C  +V ++NT+      + D  RA  ++S ML 
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  PD +TY+++I  LCR G VD+   LL  M S   +P V++Y +++ G CK  ++ E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  ++  M E GC PN  TY L+ +G+     + + +++AN L++
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGL----CKIDKLDMANDLLT 357



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 163/328 (49%), Gaps = 24/328 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YN  +   CK+ ++  A +V+  ++     PDVVT+N +I  LC  G ++ A +V
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------GMCKKGM 209
            D++ R      ++TY  LI      G++ +A+ ++  M              G CK G 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGE 171

Query: 210 VGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTY 267
           + +A+ F+  ++ R GC PD  +Y++L+  L       + ++L+ EMI R     +VV +
Sbjct: 172 IDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L+   C+    + A ++L +  E G  PD  +Y  +I   C+ G +D     L+ M+S
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS 291

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC PD+V Y  ++   CK G   +A  + +++ + GC PN  +Y+ +F  L     KI 
Sbjct: 292 RGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC----KID 347

Query: 388 ALGMISEMLS----KGIEPDEITYNSLI 411
            L M +++L+    KG   D + + +L+
Sbjct: 348 KLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 170/334 (50%), Gaps = 31/334 (9%)

Query: 10  PKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK 69
           P++ E V+       +P+            F  LI    +AG+ DE+   ++ M  +G  
Sbjct: 71  PEAMEVVKNMKDGACKPDV---------VTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA 121

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
            ++V    LI       +S +AV VM+ +     PD   YNA+I GFCK+ +I+ A   L
Sbjct: 122 ANLVTYNTLINGLSSAGRSGEAVLVMQGMTT--TPDTQTYNAIIHGFCKSGEIDRAYGFL 179

Query: 130 DRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATM 187
           + ++ R G SPD  TY+I+I  LC    +  A ++  +++ R +C  +V+ +  L+    
Sbjct: 180 EEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD--- 236

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G CK   + +A + + S+   GC PDV++Y+ ++  L   G  ++
Sbjct: 237 ---------------GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK 281

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           G  L+ +M+SRG +P+VVTY++L++ LC+ GK  +A  +++   E G TP+A +Y  +  
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
             CK  +LD+A + L  +   G + D+V +  +L
Sbjct: 342 GLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVF 107
           R G  D+    +E MV+ GCKPDVV  T L+    +  K  +A R V  +LE    P+  
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            Y+ +  G CK +++++AN +L  +R +G   DVV +  ++ S+  R +  +AF+
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRAAFQ 389


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 187/345 (54%), Gaps = 27/345 (7%)

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRS 219
           TY +L++A  L G+   AM LL EM                   +CK G V +A + V++
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++   C+PDV+++N L+  L   G+ +E ++++ EM   G   N+VTY+ LI+ L   G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVNYN 338
           + +AV V++       TPD  +Y+ +I  +CK G +D A  FL+ M    GC PD   Y+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 339 TILAAFCKNGNADQALEIF-EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            ++   CK+ N  +A E+  E +    C  +V ++NT+      + D  RA  ++S ML 
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G  PD +TY+++I  LCR G VD+   LL  M S   +P V++Y +++ G CK  ++ E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +  ++  M E GC PN  TY L+ +G+     + + +++AN L++
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGL----CKIDKLDMANDLLT 357



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 163/328 (49%), Gaps = 24/328 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YN  +   CK+ ++  A +V+  ++     PDVVT+N +I  LC  G ++ A +V
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------GMCKKGM 209
            D++ R      ++TY  LI      G++ +A+ ++  M              G CK G 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGE 171

Query: 210 VGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-GLEPNVVTY 267
           + +A+ F+  ++ R GC PD  +Y++L+  L       + ++L+ EMI R     +VV +
Sbjct: 172 IDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + L+   C+    + A ++L +  E G  PD  +Y  +I   C+ G +D     L+ M+S
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS 291

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            GC PD+V Y  ++   CK G   +A  + +++ + GC PN  +Y+ +F  L     KI 
Sbjct: 292 RGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC----KID 347

Query: 388 ALGMISEMLS----KGIEPDEITYNSLI 411
            L M +++L+    KG   D + + +L+
Sbjct: 348 KLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 171/334 (51%), Gaps = 31/334 (9%)

Query: 10  PKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK 69
           P++ E V+       +P+            F  LI    +AG+ DE+   ++ M  +G  
Sbjct: 71  PEAMEVVKNMKDGACKPDV---------VTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA 121

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
            ++V    LI       +S +AV VM+ +     PD   YNA+I GFCK+ +I+ A   L
Sbjct: 122 ANLVTYNTLINGLSSAGRSGEAVLVMQGMTT--TPDTQTYNAIIHGFCKSGEIDRAYGFL 179

Query: 130 DRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL-RDNCKPTVITYTILIQATM 187
           + ++ R G SPD  TY+I+I  LC    +  A ++  +++ R +C  +V+ +  L+    
Sbjct: 180 EEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD--- 236

Query: 188 LEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                          G CK   + +A + + S+   GC PDV++Y+ ++  L   G  ++
Sbjct: 237 ---------------GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK 281

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
           G  L+ +M+SRG +P+VVTY++L++ LC+ GK  +A  +++   E G TP+A +Y  +  
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
             CK  +LD+A + L  +   G + D+V + T+L
Sbjct: 342 GLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           R G  D+    +E MV+ GCKPDVV  T L+    +  K  +A R+++ +LE    P+  
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            Y+ +  G CK +++++AN +L  +R +G   DVV +  ++ S+  R +  +AF+
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAFQ 389


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 192/391 (49%), Gaps = 54/391 (13%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D + Y+ L+ G C   +I+ A  +LD ++  G  P+ V +N++I +LC +G +  A K+ 
Sbjct: 34  DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLV 93

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           D +    C P  +TY  L+    L+G+ DKAM LL+ M                 G  K 
Sbjct: 94  DNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKH 153

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G      + + SLE +G + +  SY+ L+  L   GK E G +L  EM+ +G +PN + Y
Sbjct: 154 GRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVY 213

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           S LI  LCR+GK ++A + L   K KG TP++++Y  L+  Y + G +  AI     M  
Sbjct: 214 SALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTD 273

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           + C    V Y+ ++   CKNG   +AL +++                             
Sbjct: 274 NDCNHHEVCYSILINGLCKNGKLKEALIVWK----------------------------- 304

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM--ESTRFRPTVISYNII 445
                 +MLS+GI+ D + Y+S+I   C   +V++ + L   M   + + +P V++YNI+
Sbjct: 305 ------QMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNIL 358

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           +  FC    ++ +I++L  M ++GC P+  T
Sbjct: 359 LNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 162/301 (53%)

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
           + +C+ G V QA +  R +  R C  D  +Y+ L+  L N G+ +E   L+ EM   G  
Sbjct: 8   LALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTF 67

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN V +++LIS+LC+ G    A  ++     KG  P+  +Y+ L+   C  G+LD A+  
Sbjct: 68  PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 127

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M+++ C+P+ + + T++  F K+G A   + +   L + G   N  SY+++ S L+ 
Sbjct: 128 LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 187

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G     + +  EM+ KG +P+ I Y++LI  LCR+G  DEA   L++M++    P   +
Sbjct: 188 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 247

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           Y+ ++ G+ +   I+++I V   M +  C  +E  Y +LI G+   G   EA+ +   ++
Sbjct: 248 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 307

Query: 502 S 502
           S
Sbjct: 308 S 308



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 122/226 (53%)

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++ +LCR G  + AV+V R   ++    D Y+Y  L+   C +GR+D A+  LD M  +G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+ V +N +++A CK G+  +A ++ + +   GC PN  +YN++   L   G   +A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +++ M++    P++IT+ +L+    + G   + V +LV +E   +R    SY+ +I G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            K  +    +++   M EKGCKPN   Y  LI+G+   G   EA E
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 231



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 31/316 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+      GK D+++  +  MVAN C P+ +    L+  F +  ++   VRV+ 
Sbjct: 105 EVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLV 164

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            LE+ G   + F+Y++LISG  K  + E   ++   +  +G  P+ + Y+ +I  LC  G
Sbjct: 165 SLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREG 224

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             + A +   ++      P   TY+ L+      G   KA+ +  EM             
Sbjct: 225 KPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYS 284

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+CK G + +A    + + SRG + DV++Y+ ++    N    E+G KL  +M+  
Sbjct: 285 ILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCH 344

Query: 259 G--LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY------C 310
              L+P+VVTY+IL+++ C       A+D+L    ++G  PD  + D  +          
Sbjct: 345 NPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPP 404

Query: 311 KDGRLDLAIEFLDYMI 326
           +DGR     EFLD ++
Sbjct: 405 QDGR-----EFLDELV 415



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 107/198 (54%)

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
           P++ A C+ G +D A+E    M    C+ D   Y+T++   C  G  D+A+ + +++   
Sbjct: 5   PIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVE 64

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G  PN  ++N + SAL   GD  RA  ++  M  KG  P+E+TYNSL+  LC  G +D+A
Sbjct: 65  GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKA 124

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + LL  M + +  P  I++  ++ GF K  R  + + VL ++ EKG + NE +Y  LI G
Sbjct: 125 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 184

Query: 484 IGYGGWRAEAMELANALV 501
           +   G     M+L   +V
Sbjct: 185 LFKEGKGEHGMQLWKEMV 202



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 36/180 (20%)

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+ A C+ GN DQA+E+F  +SD  C                                  
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVA-------------------------------- 33

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
              D  TY++L+  LC +G +DEAV LL +M+     P  +++N++I   CK   ++ + 
Sbjct: 34  ---DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRAS 90

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRLNRTF 518
           +++  MF KGC PNE TY  L+ G+   G   +AM L N +V+   +  D TF  L   F
Sbjct: 91  KLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGF 150


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 242/557 (43%), Gaps = 88/557 (15%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-M 95
           E  +  LI    R  K D+++   + M+  G + ++ +C  LI  + +  + ++A R+ M
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++   EP+ ++Y+ L+ GFC+   +  A  V + +   G   +VVT+N ++  LC  G
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             E A  V+  +L+    P  ++Y  L+      G+  +A+ L +++             
Sbjct: 444 AFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFN 503

Query: 203 ---------------------------------------GMCKKGMVGQAFQFVRSLESR 223
                                                  G CK G V +AF+    +E  
Sbjct: 504 TMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE 563

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              P +  YN L+  L    K  E   L++EM  +GL PNVVTY  LI+  C +G+ + A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS---------------- 327
                   EKG  P+      ++S+  + GR+D A   L  M++                
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKA 683

Query: 328 -DG------------------CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
            DG                   LP+ V YN  +A  CK+G  D A +IF  L   G  P+
Sbjct: 684 DDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPD 743

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
             +Y T+     ++G+   A  +  EML +G+ P+ ITYN+LI+ LC+ G +D A  L  
Sbjct: 744 NFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFD 803

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            +      P VISYNI+I G+CK     E++++   M ++G  P+  TY  LI G    G
Sbjct: 804 KLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQG 863

Query: 489 WRAEAMELANALVSMHA 505
              +A  L + +  + A
Sbjct: 864 DMGKATNLLDEMRELFA 880



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 228/488 (46%), Gaps = 55/488 (11%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F    T F  ++K     G    +L+  ++M   GC P +  C +L+    ++ +S+ A+
Sbjct: 144 FKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V + + + G  PDVF  + +++ +CK   + +A   +  +   GF  +VVTYN +I   
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
            S G +E A  V   +         +T T+LI+                  G C++  + 
Sbjct: 264 VSIGDMERAEMVLKLMGERGILRNKVTLTLLIK------------------GYCRQCKLE 305

Query: 212 QAFQFVRSLE-SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
           +A + +R +E S G   D  +Y +L+     + K ++  +L  EM++ GL  N+   + L
Sbjct: 306 EAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNAL 365

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C++G+  +A  +L    +  L P++YSY  L+  +C++G +  AI   + M+  G 
Sbjct: 366 INGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGI 425

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             ++V +N++L   C+ G  + AL ++  +   G  P+  SY T+   L+  G+  RAL 
Sbjct: 426 QSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALA 485

Query: 391 MISEMLSKG-----------------------------------IEPDEITYNSLISCLC 415
           + +++L++G                                    EPD +TY +LI   C
Sbjct: 486 LWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYC 545

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           + G V+EA  +   ME     P++  YN +I G  K+++  E +++L+ M  KG  PN  
Sbjct: 546 KLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVV 605

Query: 476 TYVLLIEG 483
           TY  LI G
Sbjct: 606 TYGTLIAG 613



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 29/241 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           ++GK D++     S++  G  PD      LI  +      N A  +  E+L++   P++ 
Sbjct: 721 KSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNII 780

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+G CK+  ++ A K+ D+L  +G +P+V++YNI+I   C  G    A  + +++
Sbjct: 781 TYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKM 840

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
           L++   P++ITY+ LI                   G CK+G +G+A   +  +       
Sbjct: 841 LKEGISPSLITYSALIY------------------GFCKQGDMGKATNLLDEMRELFADQ 882

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMI----------SRGLEPNVVTYSILISSLCRD 277
           ++  +  L+   +  G+ ++  KL   M            + +E +V + +  +  LC D
Sbjct: 883 NIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDVFSNAKEMLKLCVD 942

Query: 278 G 278
           G
Sbjct: 943 G 943



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F      +  LI     AG  +++    + M+  G  P+++    LI    +    +
Sbjct: 737 LRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLD 796

Query: 90  KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
           +A ++ + L   G  P+V +YN LI G+CK      A  + +++   G SP ++TY+ +I
Sbjct: 797 RAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
              C +G +  A  + D++        +  +  L++  +  G+  K  KL + M
Sbjct: 857 YGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 221/446 (49%), Gaps = 25/446 (5%)

Query: 56  SLYFIESMVAN----GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYN 110
            L F  SMVA     G +PD V    L++      K  +A+   + ++ K    D  +Y 
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162

Query: 111 ALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            LI+G CK+ +   A ++L ++       PDV+ Y  +I S C   ++  A+ ++ +++ 
Sbjct: 163 TLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V+T+  LI    + GQ  +A+ LL+EM                 G+CK+G V +
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +  +G +P+V++Y  L+     + +  + + +   +  RG+ PNV +YS++I+
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC++   ++AV + +    K +TP+  +Y  LI   CK GR+    + +D + + G   
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           +I+ YN++L   CKN   D+A+ +  K+ D G  P++S+Y T+   L  +G    A  + 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            ++L KG   +   Y  +I+ LC++G  DEA+ LL  ME     P  ++Y  +I    K 
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522

Query: 453 RRINESIEVLAAMF--EKGCKPNETT 476
            +  +++++L  M   E  C   E +
Sbjct: 523 NKNGKAVKLLREMIARESDCSGKEQS 548



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 1/269 (0%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F   L      P +  +N +L +L+ M  ++       +M  +G++P + T++ILI+   
Sbjct: 40  FNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFS 99

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
              +   A  ++    + G  PD  + + L+   C +G++  A+ F D++I      D V
Sbjct: 100 HLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQV 159

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           +Y T++   CK+G    AL++  K+   +   P+V  Y  +  +       I A  + SE
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M+ K I P+ +T+NSLI   C  G + EAVGLL +M      P V ++NI+I G CK   
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + ++  VL+ M ++G +PN  TY  L++G
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDG 308



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 1/206 (0%)

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           TP  + ++ ++S+  K     +AI F   M   G  P++  +N ++  F      + A  
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  K+  +G  P+  + NT+   L  +G    AL     ++ K    D+++Y +LI+ LC
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169

Query: 416 RDGMVDEAVGLLVDMESTRF-RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           + G    A+ LL  +E     RP VI Y  II  FCK + + ++ ++ + M  K   PN 
Sbjct: 170 KSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNV 229

Query: 475 TTYVLLIEGIGYGGWRAEAMELANAL 500
            T+  LI G    G   EA+ L N +
Sbjct: 230 VTFNSLIYGFCIVGQLKEAVGLLNEM 255



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 349 NADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           N D A+  F  +  +    PP +  +N + S+L        A+    +M  KGI+P+  T
Sbjct: 32  NLDDAVSSFNHILHMNNHTPP-IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFT 90

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           +N LI+C      ++ A  ++  +    ++P  ++ N ++ G C   ++ E++     + 
Sbjct: 91  FNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVI 150

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            K    ++ +Y  LI G+   G    A++L
Sbjct: 151 RKRFHLDQVSYGTLINGLCKSGETRAALQL 180


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ P+   +N+++   C  G + SA  VFD++ +   +PTV+++  LI            
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLIS----------- 185

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK G V + F+    +ES    PDV +++ L+  L   G+ +EG  L  EM
Sbjct: 186 -------GCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             +GL PN VT+++LI   C+ GK + A+   +    +G+ PD  +Y+ LI+  CK G L
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   ++ M + G  PD + + T++   CK G+ + ALEI  ++ + G   +  ++  +
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L   G    A  M+ +MLS G +PD+ TY  ++ C C+ G V     LL +M+S   
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P V++YN ++ G CK  ++  +  +L AM   G  PN+ TY +L+EG
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG 466



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 186/387 (48%), Gaps = 21/387 (5%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L+    P+ F +N L+ GFCK   +  A  V D +  RG  P VV++N +I   C  
Sbjct: 131 LEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKA 190

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G +E  F++   +  +   P V T++ LI     EG+ D+   L DEM  C KG+V    
Sbjct: 191 GAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM--CGKGLV---- 244

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                       P+ +++ +L+      GK +   K    M+++G+ P++VTY+ LI+ L
Sbjct: 245 ------------PNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGL 292

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C+ G  ++A  ++      GL PD  ++  LI   CK G ++ A+E    M+ +G   D 
Sbjct: 293 CKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDD 352

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V +  +++  C++G    A  +   +   G  P+  +Y  +       G+      ++ E
Sbjct: 353 VAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKE 412

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M S G  P  +TYN+L++ LC+ G V  A  LL  M +    P  I+YNI++ G  K   
Sbjct: 413 MQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKH-- 470

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLI 481
              S++V     EKG   +  +Y  L+
Sbjct: 471 -GSSVDVDIFNSEKGLVKDYASYTALV 496



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 159/307 (51%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G CK G VG A      +  RG +P V+S+N L+      G  EEG +L   M S  + P
Sbjct: 151 GFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCP 210

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V T+S LI+ LC++G+ ++   +      KGL P+  ++  LI   CK G++DLA++  
Sbjct: 211 DVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNF 270

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M++ G  PD+V YN ++   CK G+  +A  +  ++S  G  P+  ++ T+       
Sbjct: 271 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           GD   AL +   M+ +GIE D++ +  LIS LCRDG V +A  +L DM S  F+P   +Y
Sbjct: 331 GDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY 390

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            +++  FCK   +    ++L  M   G  P   TY  L+ G+   G    A  L +A+++
Sbjct: 391 TMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLN 450

Query: 503 MHAISRD 509
           +     D
Sbjct: 451 VGVAPND 457



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 35/291 (12%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +++ F   +   G  P+   +N+L+     +G       +  E+  RGL P VV+++ LI
Sbjct: 125 RSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLI 184

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  C+ G  E+   +    + + + PD +++  LI+  CK+GRLD      D M   G +
Sbjct: 185 SGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLV 244

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+ V +  ++   CK G  D AL+ F+                                 
Sbjct: 245 PNGVTFTVLIDGQCKGGKVDLALKNFQM-------------------------------- 272

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              ML++G+ PD +TYN+LI+ LC+ G + EA  L+ +M ++  RP  I++  +I G CK
Sbjct: 273 ---MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK 329

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              +  ++E+   M E+G + ++  + +LI G+   G   +A  +   ++S
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLS 380



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 22/276 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK D +L   + M+A G +PD+V    LI    +     +A R++  + 
Sbjct: 250 FTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS 309

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD   +  LI G CK   +E A ++  R+   G   D V + ++I  LC  G + 
Sbjct: 310 ASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVH 369

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   +L    KP   TYT+++                     CKKG V   F+ ++
Sbjct: 370 DAERMLRDMLSAGFKPDDPTYTMVVDC------------------FCKKGNVXMGFKLLK 411

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++S G  P V++YN L+  L   G+ +  + L+  M++ G+ PN +TY+IL+    + G
Sbjct: 412 EMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
            + D VD+  +  EKGL  D  SY  L++   K  +
Sbjct: 472 SSVD-VDIFNS--EKGLVKDYASYTALVNESSKTSK 504


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 19/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-L 98
           F  LI    +  + DE+      M+  G  PD+V+ + LI   F+  K  +   +  + L
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  + DV  +++++  + +   +  A +V  R+   G SP+VVTY+I+I  LC  G + 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VF Q+L+   +P+V+TY+ LI                   G CK   +   F    
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLID------------------GFCKSENLRDGFGLYG 439

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G  PDV+  +ML+  L   G  +E  +   + + RGL  N   ++ LI    R  
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T D + +        + PD  +Y  L+    + GRLD A+     ++  G  PD + Y 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FCK  +    L+IF+ +   G  P++  YN + +  +  G     L ++ E++  
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EPD +TYN++I   C   +  +A+ L   ++  R +P  I++ I+I  +CK  R++++
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG 483
           + + ++M E+G +PN  TY  LI+G
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDG 704



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 228/493 (46%), Gaps = 26/493 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   FRAGK +E        +A G K DVV+ + ++  + +     KA+ V   + K G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y+ LI+G C+  ++  A  V  ++  +G  P V+TY+ +I   C    +   F
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            ++  +LR    P V+  ++LI     +G  D+A++   +    K+G+    + F   ++
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA--VKRGLTLNNYLFNALID 493

Query: 222 SRGC---------------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             GC                      PDV++Y +L++ L   G+ +E   L  +++ +G 
Sbjct: 494 --GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ + Y  LI   C+       + + +  +  G+ PD   Y+ LI+ + ++G ++  +E
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  +I  G  PDIV YNT++  +C      +A+++FE L      PN  ++  +  A  
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    A+ + S ML +G EP+ +TY+ LI    +    + A  L   M   R  P ++
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SY+I+I G CK   + E+         +   P+   Y +LI G    G  AEAM L + +
Sbjct: 732 SYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 501 VSMHAISRDTFKR 513
           +    +  D  ++
Sbjct: 792 LVNGIMPDDLLQK 804



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 199/467 (42%), Gaps = 56/467 (11%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  F   +KR    G+ ++ L F  ++V  G  P +V C K++K              
Sbjct: 207 VYEFVFNSFLKR----GEVEKGLNFHRALVERGLVPKIVDCNKILK-------------- 248

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
                               G C  NQI +A+   D +   G SP++VT++ +I   C  
Sbjct: 249 --------------------GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++ AF +++ ++     P ++ Y+ILI      G+ ++   L                
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSL---------------- 332

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            F  +L +RG + DV+ ++ ++   + +G   +  ++ T M+  G+ PNVVTYSILI+ L
Sbjct: 333 -FSMAL-ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CR+G+  +A  V     ++GL P   +Y  LI  +CK   L         M+  G +PD+
Sbjct: 391 CRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V  + ++    + G  D+AL  F +    G   N   +N +    +        L M   
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M    + PD +TY  L+  L   G +DEA+ L   +    F P  I Y  +I GFCK R 
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
               +++   M   G  P+   Y +LI      G     +EL   ++
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREII 617



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 195/459 (42%), Gaps = 88/459 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  ++    R G   +++     M+  G  P+VV  + LI    +  +  +A  V  +IL
Sbjct: 348 FSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQIL 407

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++  EP V  Y++LI GFCK+  +     +   +  +G  PDVV  +++I  L  +GM++
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467

Query: 159 SAFKVFDQLL------------------------RDNCK-----------PTVITYTILI 183
            A + F Q +                        RD  K           P V+TYT+L+
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
           +    +G+ D+A+ L  ++                 G CKK       Q  + ++S G  
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           PD+  YN+L+      G  E   +L+ E+I  GLEP++VTY+ +I   C       A+ +
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               K     P+A ++  LI AYCKDGR+D A+     M+  G  P+I+ Y+ ++  + K
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG-------------------DKI- 386
             N + A E++EK+      PN+ SY+ +   L   G                   D I 
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 387 ---------------RALGMISEMLSKGIEPDEITYNSL 410
                           A+ +   ML  GI PD++   +L
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 186/434 (42%), Gaps = 44/434 (10%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           LR R F P    ++ M+G     G +E   +           P+ + Y+ L+      G 
Sbjct: 100 LRHRMFDPATRVFDRMVGQF---GNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGM 155

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI------------SYNMLLRTL 239
            D+A+     M      +   A   +  L     + DVI             Y  +  + 
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           L  G+ E+G      ++ RGL P +V  + ++  LC   +   A D        G +P+ 
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            ++  LI+ YCK+ RLD A    + MI  G +PD+V Y+ ++    + G  ++   +F  
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSM 335

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
               G   +V  ++++  A    GD  +A+ + + ML +GI P+ +TY+ LI+ LCR+G 
Sbjct: 336 ALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGR 395

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           V EA G+   +      P+V++Y+ +I GFCK+  + +   +   M  KG  P+     +
Sbjct: 396 VLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSM 455

Query: 480 LIEGIGYGGWRAEAME---------------LANALVSMHAISRDTFKRLNRT------F 518
           LI G+   G   EA+                L NAL+       D   RL RT      +
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI-------DGCFRLKRTRDGLKMY 508

Query: 519 PLLDVYKEISHLAT 532
            L+ +YK I  + T
Sbjct: 509 ILMGMYKVIPDVVT 522



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 183/393 (46%), Gaps = 16/393 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P    ++ ++  F     +E+  +     R+ G +P  V Y+ ++   C  GM++ A  
Sbjct: 106 DPATRVFDRMVGQF---GNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVD 161

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------GMCKKGMV 210
            F  + +     +    + ++   +   + D  ++  +EM               K+G V
Sbjct: 162 TFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEV 221

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +   F R+L  RG  P ++  N +L+ L    +          M+  G  PN+VT+S L
Sbjct: 222 EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTL 281

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C++ + ++A  +     EKG+ PD   Y  LI+   + G+L+         ++ G 
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             D+V +++I+ A+ + G+  +A+E++ ++   G  PNV +Y+ + + L  +G  + A G
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  ++L +G+EP  +TY+SLI   C+   + +  GL   M      P V+  +++I G  
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   ++E++       ++G   N   +  LI+G
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 18/240 (7%)

Query: 63  MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
           M +NG  PD+ +   LI  FF+E      + ++  + KYG EPD+  YN +I G+C    
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
              A K+ + L+     P+ +T+ I+I + C  G ++ A  +F  +L    +P ++TY+ 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
           LI        T+ A +L ++M                 G+CKKG++ +A    +    R 
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH 760

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PDVI+Y +L+R    +G+  E   L   M+  G+ P+ +    L     +D + ++ V
Sbjct: 761 LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAKNCV 820


>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 653

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 209/464 (45%), Gaps = 52/464 (11%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P    YNA+I    K+N + LA     ++RS    PD  TYNI+I  +C +G+++ A +
Sbjct: 171 KPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGVCKKGVVDEAIR 230

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK---------------- 206
           +  Q+ R+  +P V TYTILI   ++ G+ ++A+K L+ M + K                
Sbjct: 231 LVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNEATIRTLVHGIF 290

Query: 207 ------------------------------------KGMVGQAFQFVRSLESRGCQPDVI 230
                                                 M  +   F+R    RG  PD  
Sbjct: 291 RCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKETALFLRKTGERGYIPDSS 350

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N  +  LL      E   +    +SRG +P    Y +L+ +L    +       L+  
Sbjct: 351 TFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQALLNAQRFSAGDRYLKQM 410

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              GL    Y+Y+ +I   CK  R + A  FL  M   G  P+++ +NT L+ +   G+ 
Sbjct: 411 GGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTFLSGYSAGGDV 470

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            +   + EKL + GC P+V +++ + + L  + +   A     EML  GI+P+EITYN L
Sbjct: 471 KKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNIL 530

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I   C  G    +V L  +M+ +   P + +YN II  FCK +++ ++ E+L  M   G 
Sbjct: 531 IRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGL 590

Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           KP+  TY  LI+ +   G  +EA E+ +++     +     KRL
Sbjct: 591 KPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPDSYTKRL 634



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 211/443 (47%), Gaps = 22/443 (4%)

Query: 60  IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCK 118
            + M ++ CKPD      LI    ++   ++A+R+++ +E+ G  P+VF Y  LI GF  
Sbjct: 197 FQQMRSDDCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLI 256

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
           A +IE A K L+ ++ R  +P+  T   ++  +        AF+V    +  N     + 
Sbjct: 257 AGRIEEALKQLEMMQVRKLNPNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVA 316

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE----------------- 221
           Y  ++          +    L + G  ++G +  +  F  ++                  
Sbjct: 317 YDTVLYCLSNNSMAKETALFLRKTG--ERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDC 374

Query: 222 --SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
             SRG +P    Y +L++ LLN  ++  G++ + +M   GL  +V TY+ +I  LC+  +
Sbjct: 375 FVSRGAKPGFNGYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARR 434

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           TE A   L   +++G++P+  +++  +S Y   G +      ++ ++  GC PD++ ++ 
Sbjct: 435 TEHAAMFLTEMQDRGISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSL 494

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+   C+      A + F+++ + G  PN  +YN +  +  S+GD  R++ + + M   G
Sbjct: 495 IINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESG 554

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           + P+   YN++I   C+   V +A  LL  M     +P   +Y+ +I    ++ R +E+ 
Sbjct: 555 LSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 614

Query: 460 EVLAAMFEKGCKPNETTYVLLIE 482
           E+ ++M   GC P+  T  L+ E
Sbjct: 615 EMFSSMERHGCVPDSYTKRLVEE 637



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 181/417 (43%), Gaps = 53/417 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LI    + G  DE++  ++ M   G +P+V   T LI  F    +  +A++ +E+++ + 
Sbjct: 215 LIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRK 274

Query: 102 GEPDVFAYNALISGF------CKANQIELA----NKVLDRLR------------------ 133
             P+      L+ G       C+A ++ L     N +L R+                   
Sbjct: 275 LNPNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKETA 334

Query: 134 -------SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
                   RG+ PD  T+N  +  L     +     +FD  +    KP    Y +L+QA 
Sbjct: 335 LFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQAL 394

Query: 187 MLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDV 229
           +   +     + L +MG                 +CK      A  F+  ++ RG  P++
Sbjct: 395 LNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNL 454

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           I++N  L      G  ++   ++ +++  G  P+V+T+S++I+ LCR  + +DA D  + 
Sbjct: 455 ITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKE 514

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
             E G+ P+  +Y+ LI + C  G    +++    M   G  P++  YN I+ +FCK   
Sbjct: 515 MLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKK 574

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             +A E+ + +  +G  P+  +Y+T+  AL  SG +  A  M S M   G  PD  T
Sbjct: 575 VKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPDSYT 631



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 12/186 (6%)

Query: 305 LISAYCKDGRLDLAIEFLD------YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
           L +A  + G L L++E L       Y I+D  +        ++ ++ + G A    ++F 
Sbjct: 110 LGNALFRKGPLLLSMELLKEIRESGYRITDELMC------VLIGSWGRLGLAKYCNDVFA 163

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++S +G  P+   YN +  AL  S     A     +M S   +PD  TYN LI  +C+ G
Sbjct: 164 QISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGVCKKG 223

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           +VDEA+ L+  ME    RP V +Y I+I GF    RI E+++ L  M  +   PNE T  
Sbjct: 224 VVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNEATIR 283

Query: 479 LLIEGI 484
            L+ GI
Sbjct: 284 TLVHGI 289



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 35/251 (13%)

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +LI S  R G  +   DV       G+ P    Y+ +I A  K   L+LA      M SD
Sbjct: 144 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSD 203

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
            C PD   YN ++   CK G  D+A+ + +++   G  PNV +Y  +      +G    A
Sbjct: 204 DCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEA 263

Query: 389 LGMISEMLSKGIEPDEIT-----------------------------------YNSLISC 413
           L  +  M  + + P+E T                                   Y++++ C
Sbjct: 264 LKQLEMMQVRKLNPNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLYC 323

Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
           L  + M  E    L       + P   ++N  +    K   + E+  +      +G KP 
Sbjct: 324 LSNNSMAKETALFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPG 383

Query: 474 ETTYVLLIEGI 484
              Y++L++ +
Sbjct: 384 FNGYLVLVQAL 394



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 51/124 (41%)

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           +AL+  G  + ++ ++ E+   G    +     LI    R G+      +   +     +
Sbjct: 112 NALFRKGPLLLSMELLKEIRESGYRITDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 171

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P+   YN +I    K+  +N +      M    CKP+  TY +LI G+   G   EA+ L
Sbjct: 172 PSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGVCKKGVVDEAIRL 231

Query: 497 ANAL 500
              +
Sbjct: 232 VKQM 235


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 196/404 (48%), Gaps = 27/404 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS--PDVVTYNIMIGSLCSRGMIESAF 161
           PDV  Y  L++G CKA ++  A +VLD +  +     PDVVT N ++  LC  G ++ A 
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 162 KVFDQLLRD--NCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
              +Q +     C P  +TY  LI A    G    A +L+++M                 
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPD----VISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
           G+C+ G  G A +F R  E R   P+     ++Y+ L+  LL+        +L  E +S 
Sbjct: 290 GLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+ + Y  +IS L + G+ EDA  +  + KE G   D  +Y+ LI+ +C+  RL  A
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
            E L  M   G  PD+  YNT+L+  CK G+     E+  K+ D GC P+V ++ T+   
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
               G    AL ++  M   GI P+ + YN+LI  LC+ G VD A+ L  +M+       
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           V ++N ++ G        ++ E++  M E+ C P+  T  +L+E
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 24/390 (6%)

Query: 49  RAGKFDESLYFIESMVANG--CKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYG-E 103
           +AG+  ++L  ++ M       +PDVV    ++    +  +  +A+  +E  +   +G  
Sbjct: 184 KAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCP 243

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   YN LI  FC+   I +A ++++++ + G   ++VT N ++G LC  G   +A + 
Sbjct: 244 PNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303

Query: 164 F--DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           F   + +    K   +TY+ L+ A +       AM+L  E                  G+
Sbjct: 304 FREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            + G +  A     S++  G + D  +YN+L+       +  E  +L+ EM   G+ P+V
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+S  C+ G      ++L    + G  P   ++  L+  YCK G++D A+  L  
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS 483

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M   G  P+ V YNT++   CK G+ D A+E+F+++ +   P NV+++N +   L     
Sbjct: 484 MDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNM 543

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCL 414
             +A  ++ +M  +   PD +T + L+  L
Sbjct: 544 PEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 158/289 (54%), Gaps = 11/289 (3%)

Query: 223 RGC---QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE--PNVVTYSILISSLCRD 277
           +GC   +PDV++Y +L+  L   G+  +  +++  M  + L+  P+VVT + ++  LC+ 
Sbjct: 163 QGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKS 222

Query: 278 GKTEDAVDVL--RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           G+ ++A+  +  R +   G  P+  +Y+ LI A+C+ G + +A E ++ M ++G   +IV
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPP---NVSSYNTMFSALWSSGDKIRALGMI 392
             NTI+   C+ G    ALE F +   V  P    N  +Y+T+  AL  + +   A+ + 
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTV-WPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            E +S+G  PD I Y ++IS L + G +++A  +   M+   F+    +YNI+I GFC+ 
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +R++E+ E+L  M E G +P+  TY  L+ G    G  A   EL   ++
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 34/145 (23%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  L+    + GK DE+L  + SM  +G  P+ V+                         
Sbjct: 461 FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI------------------------- 495

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YN LI   CK   ++LA ++ D ++ +    +V T+N ++  L  + M E 
Sbjct: 496 ---------YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQ 184
           AF++ DQ+  + C P  +T  +L++
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLME 571


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 231/484 (47%), Gaps = 19/484 (3%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  ++    +  L+   F+AGK  E+L  +  M+  G   DV+ CT LI   F+  +  +
Sbjct: 39  MGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKE 98

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +   L +    P+   Y+ALI   CK   I  A   L  +  +   P+V+TY+ +I 
Sbjct: 99  AEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLIN 158

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
               +G++  AFKV  +++  N  P + TY IL+  +   G  D A+ L  +M       
Sbjct: 159 GYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKD 218

Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
                      M + G + +A + V  + S G +PD+++Y  L+   L  GK      L 
Sbjct: 219 NVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLA 278

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            EM S+ +  ++VT+++LI+ L + GK+ D   +  A +E GL+PD  +Y+ +++   K 
Sbjct: 279 QEMTSKNVVFDIVTFNVLINCLFKLGKS-DTESIYSAMREMGLSPDLATYNTMLNGNFKK 337

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G    A+E  + M S   +P+ +  N ++   C+ G  + A++I +++  +G  P  ++Y
Sbjct: 338 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 397

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
             + +    S      L     +++  ++ D+  YN LIS LC+ GM  +A  +L DME 
Sbjct: 398 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEE 457

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                   +YN +I G+C +  +  +    + M  +   P+  TY LL+ G+   G   E
Sbjct: 458 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 517

Query: 493 AMEL 496
           A +L
Sbjct: 518 ADDL 521



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 220/493 (44%), Gaps = 21/493 (4%)

Query: 27  NTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           N + L+       +  LI    + G  + +   +  M    C P+V+  + LI  + ++ 
Sbjct: 105 NLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQG 164

Query: 87  KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
             + A +V+ +++ K   P++  Y  L+ G  KA   ++A  +  +++  G   +V   +
Sbjct: 165 LLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILD 224

Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
             + ++   G +E A ++  ++     KP ++ YT L+   +  G+   A+ L  EM   
Sbjct: 225 AFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM--T 282

Query: 206 KKGMVGQAFQF------------------VRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
            K +V     F                    ++   G  PD+ +YN +L      G W  
Sbjct: 283 SKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS 342

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L  EM SR L PN +T +I+I+ LC  G+ E+A+D+L+     GL P + +Y  L++
Sbjct: 343 ALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 402

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
              K  R D  ++  + +++     D   YN +++  CK G   +A  + + + + G   
Sbjct: 403 ISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIA 462

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           + ++YN +      S    RA    S MLS+ + PD  TYN L+  L + G++ EA  LL
Sbjct: 463 DTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLL 522

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +++     P   +Y  ++ G CK R   E + +   M  KG  P    Y +LI      
Sbjct: 523 SEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKM 582

Query: 488 GWRAEAMELANAL 500
           G   +A EL N +
Sbjct: 583 GKMKQAKELMNEM 595



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 204/437 (46%), Gaps = 20/437 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVF 107
           + GK  E    +  M   G   + V  T L+   F+  K  +A+  +  +   G   DV 
Sbjct: 22  KHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVI 81

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           A   LI G  K+ QI+ A  +   L      P+ +TY+ +I S C  G I  A     ++
Sbjct: 82  ACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEM 141

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              +C P VITY+ LI                   G  K+G++  AF+ +R +  +   P
Sbjct: 142 EEKDCVPNVITYSSLIN------------------GYVKQGLLHDAFKVLRKMVHKNAMP 183

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++ +Y +LL      G  +    L ++M   GL+ NV      ++++ R G+ E+A +++
Sbjct: 184 NICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELV 243

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                 GL PD  +Y  L+  + K G++  A+     M S   + DIV +N ++    K 
Sbjct: 244 AKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKL 303

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G +D    I+  + ++G  P++++YNTM +  +  G+   AL + +EM S+ + P+ IT 
Sbjct: 304 GKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITC 362

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N +I+ LC  G ++ A+ +L +M      PT  +Y I++    K+RR +  ++    +  
Sbjct: 363 NIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVN 422

Query: 468 KGCKPNETTYVLLIEGI 484
              K ++  Y +LI  +
Sbjct: 423 MQLKVDKDVYNILISNL 439



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 203/430 (47%), Gaps = 21/430 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PDV  + +++ G CK  ++     +L  +   G + + V+Y I++ +L   G +  A   
Sbjct: 8   PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
              ++       VI  T+LI      GQ  +A  L   +                   CK
Sbjct: 68  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCK 127

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G +  A   +  +E + C P+VI+Y+ L+   +  G   +  K++ +M+ +   PN+ T
Sbjct: 128 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICT 187

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+IL+    + G  + A+D+    K+ GL  + +  D  ++   + GR++ A E +  M 
Sbjct: 188 YAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMA 247

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
           S G  PD+VNY  ++  F K+G    AL + ++++      ++ ++N + + L+  G K 
Sbjct: 248 SGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG-KS 306

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
               + S M   G+ PD  TYN++++   + G    A+ L  +M+S +  P  I+ NI+I
Sbjct: 307 DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMI 366

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA-MELANALVSMH- 504
            G C+  R+  +I++L  M   G  P  TTY +L+  I     RA+  ++    LV+M  
Sbjct: 367 NGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN-ISSKSRRADTILQTHELLVNMQL 425

Query: 505 AISRDTFKRL 514
            + +D +  L
Sbjct: 426 KVDKDVYNIL 435



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 207/458 (45%), Gaps = 32/458 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           R+G+ +E+   +  M + G KPD+V  T L+  F +  K + A+ +  E+  K    D+ 
Sbjct: 232 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 291

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N LI+   K  + +    +   +R  G SPD+ TYN M+     +G   SA ++++++
Sbjct: 292 TFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEM 350

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  IT  I+I                   G+C+ G +  A   ++ +   G  P
Sbjct: 351 KSRKLIPNAITCNIMIN------------------GLCEAGRMENAIDILKEMVLMGLYP 392

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
              +Y +LL       + +   +    +++  L+ +   Y+ILIS+LC+ G T  A  VL
Sbjct: 393 TSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVL 452

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
           +  +E+G+  D  +Y+ LI  YC    L  A      M+S+   PDI  YN +L    K 
Sbjct: 453 KDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKA 512

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A ++  ++   G  PN  +Y T+        +    L +  EM+ KG  P    Y
Sbjct: 513 GLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAY 572

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK---------TRRIN-- 456
           N LI    + G + +A  L+ +M++    PT  +Y+I+I G+C          T +I+  
Sbjct: 573 NMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYR 632

Query: 457 -ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            E+  +   M ++G  P E+T   +       G +A+A
Sbjct: 633 AEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADA 670



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 172/372 (46%), Gaps = 21/372 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  PDVVT+  ++  LC  G +     +  ++ +       ++YTIL+ A          
Sbjct: 5   GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDA---------- 54

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                   + K G V +A   +  +  RG   DVI+  +L+  L   G+ +E E L   +
Sbjct: 55  --------LFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNL 106

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
               L PN +TYS LI S C+ G    A   L   +EK   P+  +Y  LI+ Y K G L
Sbjct: 107 YQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLL 166

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A + L  M+    +P+I  Y  +L    K G  D AL+++ K+   G   NV   +  
Sbjct: 167 HDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAF 226

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            + +  SG    A  ++++M S G++PD + Y +L+    + G V  A+ L  +M S   
Sbjct: 227 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV 286

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG-IGYGGWRAEAM 494
              ++++N++I    K  + +++  + +AM E G  P+  TY  ++ G    G W + A+
Sbjct: 287 VFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS-AL 344

Query: 495 ELANALVSMHAI 506
           EL N + S   I
Sbjct: 345 ELWNEMKSRKLI 356



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 35/287 (12%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+  G+ P+VVT+  ++  LC+ GK  +   +LR   + G+  +  SY  L+ A  K G+
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A+  L  MI  G   D++    ++    K+G   +A  +F  L  +   PN  +Y+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +  +    GD   A   + EM  K   P+ ITY+SLI+   + G++ +A  +L  M    
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 435 FRPTVISYNIIILGFCK-----------------------------------TRRINESI 459
             P + +Y I++ G  K                                   + R+ E+ 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           E++A M   G KP+   Y  L++G    G  + A+ LA  + S + +
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 226/478 (47%), Gaps = 54/478 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVV------------MCTKLIKKFFQER---- 86
           L+    RAGKFD  +   + MV +GC+   V             C  L++K++       
Sbjct: 164 LLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKG 223

Query: 87  ----------------KSNKAVRVMEIL---EKYG-EPDVFAYNALISGFCKANQIELAN 126
                           +SN+   V E+L   +K G  PD++A N  I   CK N++  A 
Sbjct: 224 FCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDAL 283

Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
           ++++++R++G SPDVVTY  ++  LC       A  +++++++ + KP V +   LI   
Sbjct: 284 QMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI--- 340

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK   V +AF+    + +   +  V  YN L+      G  +
Sbjct: 341 ---------------FGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSID 385

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           +  K+++ M + G EP++VTY+IL++  C  G  E A  ++R  +  G+ PD YSY+ L+
Sbjct: 386 KAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLL 445

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              CK  +LD A  F+   +  G   D V+ N ++ AFCK      ALE+F+++   G  
Sbjct: 446 KGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQ 505

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
            +  +Y T+ + L+S G    A  +  +ML+  I+P+   YN ++  LC+ G    A  +
Sbjct: 506 ADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTI 565

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
              M      P  +++N +I    K  R  E++ +   M  +G +P+  T+  LI G+
Sbjct: 566 FSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGL 623



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 196/414 (47%), Gaps = 19/414 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           FA   L+S         L ++ L R++S+G +     Y I++      G  +S  + FD+
Sbjct: 124 FAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDE 183

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           ++   C+   + Y   I   +     D   K  D                    +C+   
Sbjct: 184 MVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNR 243

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +    + +  ++  GC PD+ + N+ +  L    +  +  +++ +M ++G  P+VVTY  
Sbjct: 244 IELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQT 303

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++S LC + K  +A+ +     ++ L PD +S   LI   CK+ ++D A E    M++  
Sbjct: 304 VVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLD 363

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
               +  YN +++ F + G+ D+A +I   +   GC P++ +YN + +   + G   +A 
Sbjct: 364 IELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAE 423

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD-MESTRFRPTVISYNIIILG 448
            +I +M + G+ PD  +YN L+  LC+   +D+A   + D ME   F  TV S NI+I  
Sbjct: 424 KLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTV-SCNILIDA 482

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           FCKT+++  ++E+   M  KG + +  TY  LI G+   G+   A EL   +++
Sbjct: 483 FCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLN 536



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 25/367 (6%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPD----VF 107
           KF E++   E MV    KPDV  C  LI   F   K+NK     E+  +    D    V 
Sbjct: 313 KFAEAIGLWEEMVKRDLKPDVFSCGALI---FGLCKNNKVDEAFELASRMLTLDIELSVC 369

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALISGF +A  I+ A K++  +R+ G  PD+VTYNI++   C+ GM+E A K+  ++
Sbjct: 370 IYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKM 429

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P   +Y  L++                  G+CK   + +AF FV      G   
Sbjct: 430 ETSGVNPDRYSYNQLLK------------------GLCKTHQLDKAFAFVSDHMEVGGFC 471

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           D +S N+L+       K +   +L  EM  +G++ + VTY  LI+ L   G    A ++ 
Sbjct: 472 DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELF 531

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                  + P+   Y+ ++   CK G    A     +MI     PD V +NT++    K 
Sbjct: 532 EQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKR 591

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
             A +AL +F+ +   G  P+  ++  + S L   G    A  +   M+  GI  D    
Sbjct: 592 SRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVS 651

Query: 408 NSLISCL 414
             LIS L
Sbjct: 652 ERLISVL 658



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 27/329 (8%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C N K +E   ++S   T      L  ++    +  LI   +RAG  D++   I  M  N
Sbjct: 344 CKNNKVDEAFELASRMLT------LDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
           GC+PD+V    L+  +       KA +++  +E  G  PD ++YN L+ G CK +Q++ A
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 457

Query: 126 NK-VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
              V D +   GF  D V+ NI+I + C    ++SA ++F ++     +   +TY  LI 
Sbjct: 458 FAFVSDHMEVGGFC-DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLIN 516

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                G  + A +L ++M                 L ++   P+V  YN++L  L  +G 
Sbjct: 517 GLFSVGYYNLAEELFEQM-----------------LNAQ-IDPNVNLYNIMLHHLCKVGH 558

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
           ++  + + + MI + + P+ VT++ LI  L +  +  +A+++ +  + +G+ PD  ++  
Sbjct: 559 FKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKY 618

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LIS    +G+  LA E  +YM+ +G + D
Sbjct: 619 LISGLLDEGKSTLAYEVWEYMMENGIILD 647



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 5/292 (1%)

Query: 213 AFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           A +F    ESR G      +   L+  L   G +    + +  + S+G+  +   Y IL+
Sbjct: 106 AVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILL 165

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S   R GK +  ++        G       Y+  I    K+   DL  ++ D  ++ G  
Sbjct: 166 SGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFC 225

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
                Y+  ++A C++   +   E+   +  +GC P++ + N     L        AL M
Sbjct: 226 LTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQM 285

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + +M +KG  PD +TY +++S LC +    EA+GL  +M     +P V S   +I G CK
Sbjct: 286 VEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCK 345

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
             +++E+ E+ + M     + +   Y  LI G     WRA +++ A  ++S 
Sbjct: 346 NNKVDEAFELASRMLTLDIELSVCIYNALISGF----WRAGSIDKAYKIISF 393



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 12/304 (3%)

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-G 259
           E  MC + +V         LE    + D I  N+++R L +    E   +      SR G
Sbjct: 70  ERSMCSEPLV--------ELERLDVELDPIVVNLVVRGLSDS---ETAVRFYWWAESRPG 118

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
            + +    + L+S L  DG      + L   K +G+      Y  L+S Y + G+ D  I
Sbjct: 119 FDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVI 178

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           E  D M+  GC    V+YN  +    KN   D   + ++     G      +Y+   SAL
Sbjct: 179 ETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISAL 238

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             S        ++ +M   G  PD    N  I  LC+   + +A+ ++  M +    P V
Sbjct: 239 CQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDV 298

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y  ++ G C  ++  E+I +   M ++  KP+  +   LI G+       EA ELA+ 
Sbjct: 299 VTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASR 358

Query: 500 LVSM 503
           ++++
Sbjct: 359 MLTL 362


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 199/399 (49%), Gaps = 18/399 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F Y+  ISG CK  + +L + +L  + + GF PD+  +N+ +  LC    +  A + F  
Sbjct: 80  FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC 139

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +++   +P V++YTILI      G+   A+++ + M                 G+C    
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199

Query: 210 VGQAFQFV-RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
           V  A++ V   ++S   +   + YN L+      G+ E+ E L + M   G EP++VTY+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           +L++    +   + A  V+      G+  DAYSY+ L+  +C+    D    F+   +  
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
               D+V+Y+T++  FC+  N  +A  +FE++   G   NV +Y ++  A    G+   A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             ++ +M   G+ PD I Y +++  LC+ G VD+A G+  DM      P  ISYN +I G
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            C++ R+ E+I++   M  K C P+E T+  +I G+  G
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 18/384 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD++A+N  +   C+ N++  A +    +  RG  PDVV+Y I+I  L   G +  A ++
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE------------------MGMC 205
           ++ ++R    P       L+       + D A +++ E                   G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K G + +A      +   GC+PD+++YN+LL    +    +  E +M EM+  G++ +  
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAY 291

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           +Y+ L+   CR    +   + +    E     D  SY  LI  +C+      A    + M
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G + ++V Y +++ AF + GN+  A ++ ++++++G  P+   Y T+   L  SG+ 
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A G+ ++M+   I PD I+YNSLIS LCR G V EA+ L  DM+     P  +++  I
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471

Query: 446 ILGFCKTRRINESIEVLAAMFEKG 469
           I G  + ++++ + +V   M +KG
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKG 495



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 175/376 (46%), Gaps = 22/376 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM--EILEK 100
           LI   FRAGK  +++    +M+ +G  PD   C  L+      RK + A  ++  EI   
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
             +     YNALISGFCKA +IE A  +   +   G  PD+VTYN+++       M++ A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
             V  +++R   +    +Y  L++        DK    +                 V+ +
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM-----------------VKEM 317

Query: 221 ESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           E RG C  DV+SY+ L+ T        +  +L  EM  +G+  NVVTY+ LI +  R+G 
Sbjct: 318 EPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           +  A  +L    E GL+PD   Y  ++   CK G +D A    + MI     PD ++YN+
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +++  C++G   +A+++FE +    C P+  ++  +   L        A  +  +M+ KG
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495

Query: 400 IEPDEITYNSLISCLC 415
              D    ++LI   C
Sbjct: 496 FTLDRDVSDTLIKASC 511



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 18/380 (4%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           + Y   I +L   GMI++A +VFD++   + +     Y   I   + E + + A  +  +
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+CK          +  +E+ G  PD+ ++N+ L  L    K
Sbjct: 70  MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
                +    M+ RG EP+VV+Y+ILI+ L R GK  DAV++  A    G++PD  +   
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLP-DIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
           L+   C   ++DLA E +   I    +    V YN +++ FCK G  ++A  +   +S +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           GC P++ +YN + +  + +    RA G+++EM+  GI+ D  +YN L+   CR    D+ 
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
              +V     R    V+SY+ +I  FC+     ++  +   M +KG   N  TY  LI+ 
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369

Query: 484 IGYGGWRAEAMELANALVSM 503
               G  + A +L + +  +
Sbjct: 370 FLREGNSSVAKKLLDQMTEL 389



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
           ++G  D++      M+ +   PD +    LI    +  +  +A+++ E ++ K   PD  
Sbjct: 407 KSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDEL 466

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
            +  +I G  +  ++  A KV D++  +GF+ D    + +I + CS
Sbjct: 467 TFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 231/494 (46%), Gaps = 57/494 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LIK +F    FD+  + ++ M+ +G  P+VV+   LI  + +      A+++ +++  K 
Sbjct: 323 LIKLNF----FDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 378

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P      +L+ GFCK++QIE A   L+ + S G S        ++  LC +    SAF
Sbjct: 379 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 438

Query: 162 KVFDQLLRDNCKPTVITYTILI----------QATML----------------------- 188
           +    +L  N +P+ +  T+L+          +AT L                       
Sbjct: 439 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 498

Query: 189 --EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G+  +A +++ EM                 G C +G V   F+    +  RG QPD+
Sbjct: 499 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 558

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN LLR L N+GK ++  KL  E  + GL  N+ TY I++   C+  + ED  ++   
Sbjct: 559 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNE 618

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K +  ++  Y+ +I A+C++G +  A++ L+ M S G LP+   Y++++   C  G 
Sbjct: 619 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 678

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + A  + +++   G  PNV  Y  +       G    A     EM+S  I P++ TY  
Sbjct: 679 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 738

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C+ G +++A  LL+ M+ +   P V++YN++  GFCK   ++ + +V   M  +G
Sbjct: 739 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 798

Query: 470 CKPNETTYVLLIEG 483
              +E TY  L+ G
Sbjct: 799 LPVDEITYTTLVHG 812



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 207/456 (45%), Gaps = 18/456 (3%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
            FR   F  ++     +   G  P +  C  L+    +  +  K   V  ++ +   PDV
Sbjct: 184 QFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDV 243

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F++  +I+  CK  ++E A ++  ++   G SP+VVTYN +I  LC  G +++AF++ ++
Sbjct: 244 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     +P + TY  LI   +     DK   +LDEM       +G  F            
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEM-------IGSGFN----------- 345

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V+ +N L+     MG  E   K+   MIS+ + P  VT   L+   C+  + E A + 
Sbjct: 346 PNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA 405

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L      GL+    +   ++   CK  R   A  F   M+S    P  +    ++   CK
Sbjct: 406 LEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK 465

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +G   +A E++ +L + G P +  + N +   L  +G    A  ++ EML +G+  D IT
Sbjct: 466 DGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 525

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+LI   C +G V+    L  +M     +P + +YN ++ G C   +++++I++     
Sbjct: 526 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 585

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             G   N  TY +++EG        +   L N L+S
Sbjct: 586 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 621



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 223/533 (41%), Gaps = 93/533 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + GK + ++     M   G  P+VV    +I    Q  + + A  + E + 
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P++  Y ALI+G  K N  +  N VLD +   GF+P+VV +N +I   C  G IE
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE 365

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+ D ++  N  PT +T   L+Q                  G CK   +  A   + 
Sbjct: 366 GALKIKDVMISKNITPTSVTLYSLMQ------------------GFCKSDQIEHAENALE 407

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S G      +   ++  L    ++    +    M+SR   P+ +  ++L+  LC+DG
Sbjct: 408 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467

Query: 279 KTEDAVD-----------------------------------VLRAAKEKGLTPDAYSYD 303
           K  +A +                                   +++   E+GL  D  +Y+
Sbjct: 468 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI  +C +G+++      + M   G  PDI  YN +L   C  G  D A++++++    
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587

Query: 364 GCPPNVSSYNTM----------------FSALWS-------------------SGDKIRA 388
           G   N+ +Y  M                F+ L S                   +G+   A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++  M SKGI P+  TY+SLI  +C  G+V++A  L+ +M    F P V+ Y  +I G
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +CK  +++ +      M      PN+ TY ++I+G    G     ME AN L+
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG----NMEKANNLL 756



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 189/399 (47%), Gaps = 19/399 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYN 110
           ++  +  F + M++   +P  ++ T L+    ++ K  +A  +   +LEK         N
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI G C A ++  A++++  +  RG   D +TYN +I   C+ G +E  F++ +++ + 
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY  L++                  G+C  G +  A +     ++ G   ++ 
Sbjct: 553 GIQPDIYTYNFLLR------------------GLCNVGKLDDAIKLWDEFKASGLISNIH 594

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y +++       + E+ E L  E++S+ +E N + Y+I+I + C++G    A+ +L   
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K KG+ P+  +Y  LI   C  G ++ A   +D M  +G +P++V Y  ++  +CK G  
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 714

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D A   + ++      PN  +Y  M       G+  +A  ++ +M   GI PD +TYN L
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  C+   +D A  +   M +       I+Y  ++ G+
Sbjct: 775 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 208/446 (46%), Gaps = 28/446 (6%)

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV V  +L + G  P +   N L+S   KAN+ E   +V  R+ S G  PDV ++  +I 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 251

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
           +LC  G +E+A ++F ++ +    P V+TY  +I                   G+C+ G 
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIIN------------------GLCQNGR 293

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  AF+    +  +G QP++ +Y  L+  L+ +  +++   ++ EMI  G  PNVV ++ 
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   C+ G  E A+ +      K +TP + +   L+  +CK  +++ A   L+ ++S G
Sbjct: 354 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 413

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
                 N  +++   CK      A    + +      P+      +   L   G  + A 
Sbjct: 414 LSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 473

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   +L KG    ++T N+LI  LC  G + EA  ++ +M         I+YN +ILGF
Sbjct: 474 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALVS-- 502
           C   ++     +   M ++G +P+  TY  L+ G+   G   +A++L     A+ L+S  
Sbjct: 534 CNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNI 593

Query: 503 -MHAISRDTFKRLNRTFPLLDVYKEI 527
             + I  + + + NR   + +++ E+
Sbjct: 594 HTYGIMMEGYCKANRIEDVENLFNEL 619


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 19/445 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI-L 98
           F  LI    +  + DE+      M+  G  PD+V+ + LI   F+  K  +   +  + L
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +  + DV  +++++  + +   +  A +V  R+   G SP+VVTY+I+I  LC  G + 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  VF Q+L+   +P+V+TY+ LI                   G CK   +   F    
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLID------------------GFCKSENLRDGFGLYG 439

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G  PDV+  +ML+  L   G  +E  +   + + RGL  N   ++ LI    R  
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +T D + +        + PD  +Y  L+    + GRLD A+     ++  G  PD + Y 
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           T++  FCK  +    L+IF+ +   G  P++  YN + +  +  G     L ++ E++  
Sbjct: 560 TLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G+EPD +TYN++I   C   +  +A+ L   ++  R +P  I++ I+I  +CK  R++++
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG 483
           + + ++M E+G +PN  TY  LI+G
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDG 704



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 228/493 (46%), Gaps = 26/493 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI   FRAGK +E        +A G K DVV+ + ++  + +     KA+ V   + K G
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+V  Y+ LI+G C+  ++  A  V  ++  +G  P V+TY+ +I   C    +   F
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            ++  +LR    P V+  ++LI     +G  D+A++   +    K+G+    + F   ++
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA--VKRGLTLNNYLFNALID 493

Query: 222 SRGC---------------------QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             GC                      PDV++Y +L++ L   G+ +E   L  +++ +G 
Sbjct: 494 --GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            P+ + Y  LI   C+       + + +  +  G+ PD   Y+ LI+ + ++G ++  +E
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  +I  G  PDIV YNT++  +C      +A+++FE L      PN  ++  +  A  
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G    A+ + S ML +G EP+ +TY+ LI    +    + A  L   M   R  P ++
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SY+I+I G CK   + E+         +   P+   Y +LI G    G  AEAM L + +
Sbjct: 732 SYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 501 VSMHAISRDTFKR 513
           +    +  D  ++
Sbjct: 792 LVNGIMPDDLLQK 804



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 199/467 (42%), Gaps = 56/467 (11%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  F   +KR    G+ ++ L F  ++V  G  P +V C K++K              
Sbjct: 207 VYEFVFNSFLKR----GEVEKGLNFHRALVERGLVPKIVDCNKILK-------------- 248

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
                               G C  NQI +A+   D +   G SP++VT++ +I   C  
Sbjct: 249 --------------------GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
             ++ AF +++ ++     P ++ Y+ILI      G+ ++   L                
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSL---------------- 332

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            F  +L +RG + DV+ ++ ++   + +G   +  ++ T M+  G+ PNVVTYSILI+ L
Sbjct: 333 -FSMAL-ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           CR+G+  +A  V     ++GL P   +Y  LI  +CK   L         M+  G +PD+
Sbjct: 391 CRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V  + ++    + G  D+AL  F +    G   N   +N +    +        L M   
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M    + PD +TY  L+  L   G +DEA+ L   +    F P  I Y  +I GFCK R 
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
               +++   M   G  P+   Y +LI      G     +EL   ++
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREII 617



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 16/377 (4%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           LR R F P    ++ M+G     G +E   +           P+ + Y+ L+      G 
Sbjct: 100 LRHRMFDPATRVFDRMVGQF---GNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGM 155

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI------------SYNMLLRTL 239
            D+A+     M      +   A   +  L     + DVI             Y  +  + 
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           L  G+ E+G      ++ RGL P +V  + ++  LC   +   A D        G +P+ 
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            ++  LI+ YCK+ RLD A    + MI  G +PD+V Y+ ++    + G  ++   +F  
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSM 335

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
               G   +V  ++++  A    GD  +A+ + + ML +GI P+ +TY+ LI+ LCR+G 
Sbjct: 336 ALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGR 395

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           V EA G+   +      P+V++Y+ +I GFCK+  + +   +   M  KG  P+     +
Sbjct: 396 VLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSM 455

Query: 480 LIEGIGYGGWRAEAMEL 496
           LI G+   G   EA+  
Sbjct: 456 LINGLSRQGMMDEALRF 472



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 183/393 (46%), Gaps = 16/393 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P    ++ ++  F     +E+  +     R+ G +P  V Y+ ++   C  GM++ A  
Sbjct: 106 DPATRVFDRMVGQF---GNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVD 161

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------GMCKKGMV 210
            F  + +     +    + ++   +   + D  ++  +EM               K+G V
Sbjct: 162 TFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEV 221

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +   F R+L  RG  P ++  N +L+ L    +          M+  G  PN+VT+S L
Sbjct: 222 EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTL 281

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I+  C++ + ++A  +     EKG+ PD   Y  LI+   + G+L+         ++ G 
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
             D+V +++I+ A+ + G+  +A+E++ ++   G  PNV +Y+ + + L  +G  + A G
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  ++L +G+EP  +TY+SLI   C+   + +  GL   M      P V+  +++I G  
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   ++E++       ++G   N   +  LI+G
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 248/592 (41%), Gaps = 125/592 (21%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           R  T  LS DV    +  L+   F +G  D +    E M A+G +P VV  T LI ++ +
Sbjct: 214 RMTTQGLSLDV--VGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCK 271

Query: 85  ERKSNKAVRVMEILEKYGE-PDVFAYNALISGFC-------------------------- 117
            ++  +A  + E + + G  PDV   +AL+ G C                          
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331

Query: 118 ---------KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
                    K  ++  +  +L  + SRG + D+V Y  ++  L   G IE A  V    L
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            DN  P  +TYT+L+ A    G  D A ++L +M                 G+ K+G + 
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 212 QAFQFVRSLESRGCQPDVISY-------------------------------NMLLRTLL 240
           +A  ++R ++  G  P+V++Y                               N ++ +L+
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 241 NM----GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           N     G  EE E L  +M  RGL  + V Y+ L+  L + G    A+ V +   E+ L+
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLS 571

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PDA  Y+  I+  C+ G+   A  FL  M + G  PD   YNT+++A C+ GN  +AL++
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT---------- 406
             ++      PN+ +Y T+   L  +G   +A  +++EM S G  P  +T          
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691

Query: 407 -------------------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                                    YN+L+  LC  GM  +A  +L +M      P  I+
Sbjct: 692 SRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTIT 751

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
           +N +ILG CK+  ++ +    A M  +G  PN  T+  L+ G+   G   EA
Sbjct: 752 FNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 803



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 226/504 (44%), Gaps = 53/504 (10%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYN 110
           + +ESL  +  MV+ G   D+VM T ++ +  +E K  +A  V+   L     P+   Y 
Sbjct: 344 RVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYT 403

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
            L+   C+A  I+ A ++L ++  +  SP+VVT++ ++  L  RG I  A     ++   
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463

Query: 171 NCKPTVITYTILIQA---------------TMLEGQTDKAMKLLDEM--GMCKKGMVGQA 213
              P V+TY  LI                  ML    +    ++D +  G+ K G + +A
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               + +  RG   D ++Y  L+  L   G      K+  E++ R L P+ V Y++ I+ 
Sbjct: 524 EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINC 583

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           LCR GK  +A   L+  +  GL PD  +Y+ +ISA C++G    A++ L+ M      P+
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643

Query: 334 IVNYNTILAAFCKNGNADQA-----------------------------------LEIFE 358
           ++ Y T++    + G  ++A                                   LE+ E
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHE 703

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
            +   G   +++ YNT+   L   G   +A  ++ EML +GI PD IT+N+LI   C+  
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSS 763

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
            +D A      M      P + ++N ++ G     RI E+  V+  M + G +PN  TY 
Sbjct: 764 HLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYD 823

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
           +L+ G      + EA+ L   +VS
Sbjct: 824 ILVTGYAKKSNKVEALRLYCEMVS 847



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 205/411 (49%), Gaps = 19/411 (4%)

Query: 72  VVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLD 130
           VV    LI  + + +    A+ V+E +   G   DV  YN L++GF  +   + A +V +
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
           R+++ G  P VVT+  +IG  C    IE AF +++ ++R    P V+T + L+       
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD------ 302

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G+C+ G   +A+   R ++  G  P+ ++Y   + +L  + +  E   
Sbjct: 303 ------------GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLG 350

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+ EM+SRG+  ++V Y+ ++  L ++GK E+A DVLR A    +TP+  +Y  L+ A+C
Sbjct: 351 LLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHC 410

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G +D A + L  M      P++V +++IL    K G   +A     K+ D G  PNV 
Sbjct: 411 RAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV 470

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +Y T+    +    +  AL +  +ML +G+E +    +SL++ L ++G ++EA  L  DM
Sbjct: 471 TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM 530

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
                    ++Y  ++ G  KT  +  +++V   + E+   P+   Y + I
Sbjct: 531 GERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFI 581



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 222/465 (47%), Gaps = 18/465 (3%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
           +L  +E M   G   DVV    L+  FF    ++ A  V E ++  G EP V  +  LI 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
            +CK  +IE A  + + +   G  PDVVT + ++  LC  G    A+ +F ++ +    P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFV 217
             +TY   I +     + ++++ LL EM                  + K+G + +A   +
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R   S    P+ ++Y +L+      G  +  E+++ +M  + + PNVVT+S +++ L + 
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G    A   +R  K+ G+ P+  +Y  LI  + K    + A++    M+ +G   +    
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           ++++    KNGN ++A  +F+ + + G   +  +Y T+   L+ +G+   AL +  E++ 
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           + + PD + YN  I+CLCR G   EA   L +M +T   P   +YN +I   C+    ++
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           ++++L  M     KPN  TY  L+ G+   G   +A  L N + S
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 203/453 (44%), Gaps = 19/453 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           + G  +E+    + M   G   D V    L+   F+      A++V  E++E+   PD  
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV 575

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN  I+  C+  +   A   L  +R+ G  PD  TYN MI + C  G    A K+ +++
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              + KP +ITYT L+   +  G  +KA  LL+EM     G       + R L++  C  
Sbjct: 636 KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEM--ASAGFTPTPLTYRRVLQA--CSG 691

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
               Y +L    L MG               GL  ++  Y+ L+  LC  G T  A  VL
Sbjct: 692 SRSPYVILEVHELMMGA--------------GLHADITVYNTLVHVLCCHGMTRKATIVL 737

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                +G+ PD  +++ LI  +CK   LD A      M+  G  P+I  +NT+L      
Sbjct: 738 DEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESA 797

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G   +A  +  ++  +G  PN  +Y+ + +      +K+ AL +  EM+SKG  P   TY
Sbjct: 798 GRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 857

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           NSLIS   + GM+++A  L  +M+      T  +Y+I++ G+ K R   E   +L  M E
Sbjct: 858 NSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            G KP++ T   +       G   EA  L   L
Sbjct: 918 LGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 22/459 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           L+KR    G   ++  ++  M  +G  P+VV    LI  FF+ +    A+ V  ++L + 
Sbjct: 444 LVKR----GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            E + F  ++L++G  K   IE A  +   +  RG   D V Y  ++  L   G + +A 
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           KV  +L+  N  P  + Y + I      G+  +A   L EM                   
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C++G   +A + +  ++    +P++I+Y  L+  LL  G  E+ + L+ EM S G  P  
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           +TY  ++ +          ++V       GL  D   Y+ L+   C  G    A   LD 
Sbjct: 680 LTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDE 739

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+  G  PD + +N ++   CK+ + D A   + ++   G  PN++++NT+   L S+G 
Sbjct: 740 MLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGR 799

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +I EM   G+EP+ +TY+ L++   +     EA+ L  +M S  F P   +YN 
Sbjct: 800 IGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 859

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I  F K   +N++ E+ + M  +G     +TY +L+ G
Sbjct: 860 LISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 898



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 184/411 (44%), Gaps = 19/411 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           D  +YN  ++G  +     LA  VL  +  RG   D VT +  +  L   G++  A  + 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 165 DQLLRDNC--KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           + L+R        V+ +  LI           A+ +++ M                 G  
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFF 235

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G    A++    +++ G +P V+++  L+     M + EE   L   M+  G+ P+VV
Sbjct: 236 YSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVV 295

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T S L+  LCRDG+  +A  + R   + G+ P+  +Y   I +  K  R++ ++  L  M
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +S G   D+V Y T++    K G  ++A ++          PN  +Y  +  A   +G+ 
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  M+ +M  K + P+ +T++S+++ L + G + +A G +  M+ +   P V++Y  +
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTL 475

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I GF K +    +++V   M  +G + N      L+ G+   G   EA  L
Sbjct: 476 IDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 17/311 (5%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQP----DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           C    +  A   +RS  S G QP    D +SYN+ L  L   G       +++EM  RG+
Sbjct: 91  CSLHALRPALSLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGV 148

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDV----LRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             + VT S  +  L R G   +A  +    +R     GL      ++ LI  YCK   + 
Sbjct: 149 PWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL--GVVGWNALIDGYCKVQDMA 206

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A+  ++ M + G   D+V YNT++A F  +G+AD A E+ E++   G  P+V ++ T+ 
Sbjct: 207 AALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLI 266

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
                      A  +   M+  G+ PD +T ++L+  LCRDG   EA  L  +M+     
Sbjct: 267 GEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVA 326

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           P  ++Y   I    K +R+NES+ +L  M  +G   +   Y  +++ +G  G   EA + 
Sbjct: 327 PNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKD- 385

Query: 497 ANALVSMHAIS 507
               V  HA+S
Sbjct: 386 ----VLRHALS 392


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 221/449 (49%), Gaps = 24/449 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+  ++ +MV  G   D   CT +I  F Q+   N+ V     + + G  P+V  +
Sbjct: 238 GRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINF 297

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+G CK   I+ A ++L+ +  RG+ P+V T+  +I  LC +G  E AF++F +L+R
Sbjct: 298 TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357

Query: 170 -DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            D  KP V TYT +I     E + ++A  LL  M                 G CK G   
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFV 417

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A++ +  +   G  P++ +YN ++  L   G  +E  +L+ ++   GL+ + VTY+IL+
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  CR   T  ++       + G TPD +SY  LIS +C+  ++  +    +  +S G +
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLI 537

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P    Y +++  +C+ GN   A+++F+++S+ GC P+  +Y  + S L        A  +
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+ KG+ P E+T  +L    C+      A+ +L  +E  ++  TV   N ++   C 
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCS 654

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLL 480
             +++ +      + +K  +PN     LL
Sbjct: 655 EGKLDMAALFFHKLLDK--EPNVNRVTLL 681



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 191/391 (48%), Gaps = 19/391 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+ ++   PD  ++  ++   C   ++  A + L+ +  RGF  D  T  ++I + C +
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQK 272

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G +      F +++     P VI +T LI                   G+CK+G + QAF
Sbjct: 273 GYVNRVVGYFWKMVEMGLAPNVINFTALIN------------------GLCKQGSIKQAF 314

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISS 273
           + +  +  RG +P+V ++  L+  L   G  E+  +L  +++ S G +PNV TY+ +I+ 
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C++ K   A  +L   +E+GL P+  +Y  LI  +CK G    A E +D M  +G  P+
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  YN I+   CK G+ D+A  +  K+S  G   +  +Y  + S      D  R+L   +
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN 494

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +ML  G  PD  +Y +LIS  CR   + E+  L  +  S    PT  +Y  +I G+C+  
Sbjct: 495 KMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + ++++   M   GC P+  TY  LI G+
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGL 585



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 4/335 (1%)

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           +++ T LI    LE + ++ M+ +  M   + G + +A   V  ++++G  P   + N +
Sbjct: 138 IVSATALIGNKNLE-RANEVMQCM-VMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCV 195

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L   + MG  E  E +  EM  RG+ P+ V++ +++ + C  G+  +A   L A  E+G 
Sbjct: 196 LDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGF 255

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             D  +   +I A+C+ G ++  + +   M+  G  P+++N+  ++   CK G+  QA E
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFE 315

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCL 414
           + E++   G  PNV ++ T+   L   G   +A  +  +++ S G +P+  TY ++I+  
Sbjct: 316 LLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C++  ++ A  LL  M+     P   +Y  +I G CK      + E++  M ++G  PN 
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNI 435

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            TY  +I+G+   G   EA  L N  VS+H +  D
Sbjct: 436 YTYNAIIDGLCKKGSLDEAYRLLNK-VSVHGLQAD 469


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 234/509 (45%), Gaps = 53/509 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R   + E+    + M A+G +PD V    L+  + + R+ ++A+ V++ +E+ G  P V 
Sbjct: 255 RRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV 314

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LIS + K   +E A  +   +  +G  PDVVTY  +I  L   G I++A   +D++
Sbjct: 315 TYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEM 374

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
           +R+ CKP + TY  LI+   + G+  + M + DE+                    + G+ 
Sbjct: 375 VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLD 434

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +     + ++  G  P+  +Y  L+ +    G ++   ++   M+  G+ P+V TY+ +
Sbjct: 435 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 494

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +S+L R G+ E A  +    +E+   PD YSY  L+ AY    RLD      D + S+  
Sbjct: 495 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554

Query: 331 LP-----------------------------------DIVNYNTILAAFCKNGNADQALE 355
            P                                   DI   N +++ + KN    +  +
Sbjct: 555 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 614

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I   + +     + ++YN++       GD  +   +++E+ S G+ PD  +YN++I    
Sbjct: 615 ILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYG 674

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G + EA  L  +M+ +  +P V++YNI +  +       E+IE++  M  +GCKPNE 
Sbjct: 675 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 734

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMH 504
           TY  ++EG    G   +A    + L  +H
Sbjct: 735 TYNSIVEGYCRNGKLTDAKIFVSNLPQLH 763



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 227/469 (48%), Gaps = 33/469 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    RAG+F +++     MV +G +P +V    ++  +     S  AV   E++E
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVY-----SKMAVPWKEVVE 229

Query: 100 ------KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
                 ++G  PD + YN LIS   +    + A +V D +++ GF PD VT+N ++    
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
                + A +V  ++ R  C P+V+TY  LI + + +G  ++A+ L  EM          
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ + G +  A      +   GC+P++ +YN L++     GK+ E   +  E+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S G  P++VT++ L++   ++G   +   V +  K+ G  P+  +Y  LIS+Y + G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           DLA++    M+  G  PD+  YN +L+A  + G  +QA ++F ++ +  C P+  SY+++
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 376 FSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             A  ++   DK++AL    ++ S+ IEP      +L+    +   + EA    +++   
Sbjct: 530 LHAYANAKRLDKMKALS--DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           R    +   N ++  + K R + +  ++L+ M E     +  TY  L+ 
Sbjct: 588 RCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 224/477 (46%), Gaps = 38/477 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+  E+   +++  A G  PD    T L+  F +  +   AV V   +   G +P + 
Sbjct: 153 RAGRLAEASALLDA--APG--PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 208

Query: 108 AYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN ++  + K A   +   +++  ++  G +PD  TYN +I     R + + A +VFD+
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     +P  +T+                  LLD  G  ++    +A + ++ +E  GC 
Sbjct: 269 MKASGFEPDKVTFN----------------SLLDVYGKARRH--DEAIEVIQEMERVGCP 310

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V++YN L+ + +  G  E+   L  EM  +G++P+VVTY+ LIS L R GK + A+  
Sbjct: 311 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVE 370

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  P+  +Y+ LI  +   G+    +   D + S G +PDIV +NT+LA F +
Sbjct: 371 YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQ 430

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG   +   +F+++   G  P   +Y ++ S+    G    A+ +   M+  GI PD  T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+++S L R G  ++A  L  +ME    +P   SY+ ++  +   +R+++   +   ++
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            +  +P+               W  + + L N+ V+  A +   F  L +    LD+
Sbjct: 551 SERIEPH--------------NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDI 593



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD ++YN +I  + +  Q++ A+++   ++  G  PDVVTYNI + S  S  M E A ++
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
              ++   CKP   TY  +++     G+   A   +  +     G   Q  Q
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQ 772


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 231/472 (48%), Gaps = 22/472 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           +D     +  +I    RA  F E    ++ M   G +    M    +  + +  +  +++
Sbjct: 212 YDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESL 271

Query: 93  RVMEILEKYG-EPDVF--AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
               ++++ G EP +   AYN+++    K  ++++A  +  ++ + G S + +TY  MI 
Sbjct: 272 EAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQ 331

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
               +  +E A K+ D ++++N  P V+TYTI+I A                  +CK+ M
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISA------------------LCKRKM 373

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + QA+  ++ +   GC+P++ +YN L++ L  + + EE  +L+T M   G+ PN+ TY+I
Sbjct: 374 IEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTI 433

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           L   LC+  + + A ++   A  +GL P+  +Y+ L++ YC+  RL  A++ L  M  + 
Sbjct: 434 LTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQND 493

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           C PD V Y T++    +      AL + +++ + G   N  + N +   L   G+   A 
Sbjct: 494 CTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDAS 553

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
                M  +G       Y   I CL   G ++EA  LL +M +  + P + +YN +I GF
Sbjct: 554 IFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGF 613

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANAL 500
           C+  R++++  +L  M E G  P+  +Y +LI+     G   +A +L A AL
Sbjct: 614 CRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATAL 665



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 203/424 (47%), Gaps = 21/424 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVV--MCTKLIKKFFQERKSNKAVRVMEILEKYG-EPD 105
           R+G+F ESL     M   G +P ++      ++    + +K + A  +   +   G   +
Sbjct: 263 RSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCN 322

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
              Y ++I  F    ++E A K+LD +    ++PDVVTY I+I +LC R MIE A+ V  
Sbjct: 323 NLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQ 382

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
           ++  + C+P + TY  LIQ                  G+C      +A + V  +E  G 
Sbjct: 383 KMRENGCEPNIYTYNALIQ------------------GLCAVRRPEEALELVTLMEQGGV 424

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
            P++ +Y +L   L  + + +  +++  E ++RGL+PN VTY+ L++  CR  +  +A+D
Sbjct: 425 PPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMD 484

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +L+   +   TPD  +Y  LI    +  +L  A+   D M + G   +    N +     
Sbjct: 485 ILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLA 544

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           + GN   A   + ++ D G   + S Y      L ++G+   A  ++ EM++KG  P+  
Sbjct: 545 RVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLT 604

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           TYN++I   CR G +D+A  +L  M      P   SYNI+I  F    R  ++ ++ A  
Sbjct: 605 TYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATA 664

Query: 466 FEKG 469
            E+G
Sbjct: 665 LERG 668



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 178/396 (44%), Gaps = 27/396 (6%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           +T +  ++    +  K D +      M+ NG   + +  T +I+ FF + K   A+++++
Sbjct: 288 DTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLD 347

Query: 97  -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            +++    PDV  Y  +IS  CK   IE A  VL ++R  G  P++ TYN +I  LC+  
Sbjct: 348 DMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVR 407

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
             E A ++   + +    P + TYTIL        + D+A ++ +E              
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+   + +A   ++ +    C PD ++Y  L++ L+   +  +  ++  EM ++
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G + N  T +IL   L R G  +DA    R  K++G    A  Y   I      G ++ A
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              L  MI+ G  P++  YNT++  FC+ G  D A  +   + + G  P+  SYN +   
Sbjct: 588 QALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKE 647

Query: 379 LWSSGDKIRALGMISEMLSKGI---------EPDEI 405
             + G    A  + +  L +G+         EPDE+
Sbjct: 648 FHNQGRTQDADQLYATALERGVVLNPKPVIQEPDEL 683


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 230/494 (46%), Gaps = 57/494 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
           LIK +F    FD+  + ++ M+  G  P+VV+   LI  + +      A+++ +++  K 
Sbjct: 300 LIKLNF----FDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P      +L+ GFCK++QIE A   L+ + S G S        ++  LC +    SAF
Sbjct: 356 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 415

Query: 162 KVFDQLLRDNCKPTVITYTILI----------QATML----------------------- 188
           +    +L  N +P+ +  T+L+          +AT L                       
Sbjct: 416 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 475

Query: 189 --EGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDV 229
              G+  +A +++ EM                 G C +G V   F+    +  RG QPD+
Sbjct: 476 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 535

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            +YN LLR L N+GK ++  KL  E  + GL  N+ TY I++   C+  + ED  ++   
Sbjct: 536 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNE 595

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K +  ++  Y+ +I A+C++G +  A++ L+ M S G LP+   Y++++   C  G 
Sbjct: 596 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 655

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            + A  + +++   G  PNV  Y  +       G    A     EM+S  I P++ TY  
Sbjct: 656 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I   C+ G +++A  LL+ M+ +   P V++YN++  GFCK   ++ + +V   M  +G
Sbjct: 716 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 775

Query: 470 CKPNETTYVLLIEG 483
              +E TY  L+ G
Sbjct: 776 LPVDEITYTTLVHG 789



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 206/456 (45%), Gaps = 18/456 (3%)

Query: 47  SFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
            FR   F  ++     +   G  P +  C   +    +  +  K   V  ++ +   PDV
Sbjct: 161 QFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACPDV 220

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F++  +I+  CK  ++E A ++  ++   G SP+VVTYN +I  LC  G +++AF++ ++
Sbjct: 221 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     +P + TY  LI   +     DK   +LDEM       +G  F            
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEM-------IGAGFN----------- 322

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P+V+ +N L+     MG  E   K+   MIS+ + P  VT   L+   C+  + E A + 
Sbjct: 323 PNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA 382

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L      GL+    +   ++   CK  R   A  F   M+S    P  +    ++   CK
Sbjct: 383 LEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK 442

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +G   +A E++ +L + G P +  + N +   L  +G    A  ++ EML +G+  D IT
Sbjct: 443 DGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 502

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+LI   C +G V+    L  +M     +P + +YN ++ G C   +++++I++     
Sbjct: 503 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 562

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             G   N  TY +++EG        +   L N L+S
Sbjct: 563 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLS 598



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 223/533 (41%), Gaps = 93/533 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + GK + ++     M   G  P+VV    +I    Q  + + A  + E + 
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 282

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G +P++  Y ALI+G  K N  +  N +LD +   GF+P+VV +N +I   C  G IE
Sbjct: 283 VKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIE 342

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+ D ++  N  PT +T   L+Q                  G CK   +  A   + 
Sbjct: 343 GALKIKDVMISKNITPTSVTLYSLMQ------------------GFCKSDQIEHAENALE 384

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + S G      +   ++  L    ++    +    M+SR   P+ +  ++L+  LC+DG
Sbjct: 385 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 444

Query: 279 KTEDAVD-----------------------------------VLRAAKEKGLTPDAYSYD 303
           K  +A +                                   +++   E+GL  D  +Y+
Sbjct: 445 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 504

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LI  +C +G+++      + M   G  PDI  YN +L   C  G  D A++++++    
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564

Query: 364 GCPPNVSSYNTM----------------FSALWS-------------------SGDKIRA 388
           G   N+ +Y  M                F+ L S                   +G+   A
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++  M SKGI P+  TY+SLI  +C  G+V++A  L+ +M    F P V+ Y  +I G
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           +CK  +++ +      M      PN+ TY ++I+G    G     ME AN L+
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG----NMEKANNLL 733



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 189/399 (47%), Gaps = 19/399 (4%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYN 110
           ++  +  F + M++   +P  ++ T L+    ++ K  +A  +   +LEK         N
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           ALI G C A ++  A++++  +  RG   D +TYN +I   C+ G +E  F++ +++ + 
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             +P + TY  L++                  G+C  G +  A +     ++ G   ++ 
Sbjct: 530 GIQPDIYTYNFLLR------------------GLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y +++       + E+ E L  E++S+ +E N + Y+I+I + C++G    A+ +L   
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           K KG+ P+  +Y  LI   C  G ++ A   +D M  +G +P++V Y  ++  +CK G  
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D A   + ++      PN  +Y  M       G+  +A  ++ +M   GI PD +TYN L
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +  C+   +D A  +   M +       I+Y  ++ G+
Sbjct: 752 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 207/446 (46%), Gaps = 28/446 (6%)

Query: 91  AVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           AV V  +L + G  P +   N  +S   KAN+ E   +V  R+ S G  PDV ++  +I 
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVIN 228

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
           +LC  G +E+A ++F ++ +    P V+TY  +I                   G+C+ G 
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIIN------------------GLCQNGR 270

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  AF+    +  +G QP++ +Y  L+  L+ +  +++   ++ EMI  G  PNVV ++ 
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI   C+ G  E A+ +      K +TP + +   L+  +CK  +++ A   L+ ++S G
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 390

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
                 N  +++   CK      A    + +      P+      +   L   G  + A 
Sbjct: 391 LSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 450

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            +   +L KG    ++T N+LI  LC  G + EA  ++ +M         I+YN +ILGF
Sbjct: 451 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-----ANALVS-- 502
           C   ++     +   M ++G +P+  TY  L+ G+   G   +A++L     A+ L+S  
Sbjct: 511 CNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNI 570

Query: 503 -MHAISRDTFKRLNRTFPLLDVYKEI 527
             + I  + + + NR   + +++ E+
Sbjct: 571 HTYGIMMEGYCKANRIEDVENLFNEL 596


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 217/451 (48%), Gaps = 21/451 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           +++ + Q R  ++A+    ++++ G +P     N ++S   + N+IE A      +    
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME 221

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
              +V T+NIMI  LC  G ++ A      +     KPT++TY  L+Q   L G+ + A 
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281

Query: 197 KLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            ++ EM                  MC +G   +A + +R ++  G  PD +SYN+L+R  
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGC 338

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            N G  E       EM+ +G+ P   TY+ LI  L  + K E A  ++R  +EKG+  D+
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y+ +I+ YC+ G    A    D M++DG  P    Y +++   C+     +A E+FEK
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +   G  P++   NT+     ++G+  RA  ++ EM    I+PD++TYN L+  LC +G 
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
            +EA  L+ +M+    +P  ISYN +I G+ K      +  V   M   G  P   TY  
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578

Query: 480 LIEGIGYGGWRAEAMELANALVSMHAISRDT 510
           L++G+        A EL   + S   +  D+
Sbjct: 579 LLKGLSKNQDGELAEELLREMKSEGIVPNDS 609



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 22/453 (4%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD K      ++    R  + + +  F   M     K +V     +I    +E K  KA 
Sbjct: 187 FDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAK 246

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
             + I+E +G +P +  YN L+ G+    +IE A  ++  ++S+GF PD+ TYN ++  +
Sbjct: 247 GFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWM 306

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C+ G    A +V  ++      P  ++Y ILI+     G  + A    DEM   K+GMV 
Sbjct: 307 CNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEM--VKQGMV- 360

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                          P   +YN L+  L    K E  E L+ E+  +G+  + VTY+I+I
Sbjct: 361 ---------------PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVI 405

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G  + A  +       G+ P  ++Y  LI   C+  +   A E  + ++  G  
Sbjct: 406 NGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMK 465

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+V  NT++   C  GN D+A  + +++  +   P+  +YN +   L   G    A  +
Sbjct: 466 PDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAREL 525

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM  +GI+PD I+YN+LIS   + G    A  +  +M S  F PT+++YN ++ G  K
Sbjct: 526 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSK 585

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +    + E+L  M  +G  PN++++  +IE +
Sbjct: 586 NQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 170/370 (45%), Gaps = 52/370 (14%)

Query: 32  SFDVKET--QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           SF +K T   +  L++     G+ + +   I  M + G +PD+     ++     E +++
Sbjct: 254 SFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRAS 313

Query: 90  KAVRVM---------------------------------EILEKYGEPDVFAYNALISGF 116
           + +R M                                 E++++   P  + YN LI G 
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373

Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
              N+IE A  ++  +R +G   D VTYNI+I   C  G  + AF + D+++ D  KPT 
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQ 433

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRS 219
            TYT LI       +T +A +L +++                 G C  G + +AF  ++ 
Sbjct: 434 FTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKE 493

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           ++     PD ++YN L+R L   GK+EE  +LM EM  RG++P+ ++Y+ LIS   + G 
Sbjct: 494 MDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 553

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
           T+ A  V       G  P   +Y+ L+    K+   +LA E L  M S+G +P+  ++ +
Sbjct: 554 TKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCS 613

Query: 340 ILAAFCKNGN 349
           ++ A  K+ N
Sbjct: 614 VIEAMSKSDN 623



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 3/238 (1%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L   ++S+   P  VT  +      R     D  D L  A ++  T     +D ++  YC
Sbjct: 108 LAIAVVSKLSSPKSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYC 167

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           +   +D AIE    M   G  P     N IL+   +    + A   +  +  +    NV 
Sbjct: 168 QLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVY 227

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           ++N M + L   G   +A G +  M S GI+P  +TYN+L+      G ++ A  ++ +M
Sbjct: 228 TFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM 287

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +S  F+P + +YN I+   C   R +   EVL  M   G  P+  +Y +LI G    G
Sbjct: 288 KSKGFQPDLQTYNPILSWMCNEGRAS---EVLREMKGIGLVPDSVSYNILIRGCSNNG 342


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 221/449 (49%), Gaps = 24/449 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+  E+  ++ +MV  G   D   CT +I  F Q+   N+ V     + + G  P+V  +
Sbjct: 238 GRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINF 297

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            ALI+G CK   I+ A ++L+ +  RG+ P+V T+  +I  LC +G  E AF++F +L+R
Sbjct: 298 TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357

Query: 170 -DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
            D  KP V TYT +I     E + ++A  LL  M                 G CK G   
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFV 417

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A++ +  +   G  P++ +YN ++  L   G  +E  +L+ ++   GL+ + VTY+IL+
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S  CR   T  ++       + G TPD +SY  LIS +C+  ++  +    +  +S G +
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLI 537

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P    Y +++  +C+ GN   A+++F+++S+ GC P+  +Y  + S L        A  +
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
              M+ KG+ P E+T  +L    C+      A+ +L  +E  ++  TV   N ++   C 
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCS 654

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLL 480
             +++ +      + +K  +PN     LL
Sbjct: 655 EGKLDMAALFFHKLLDK--EPNVNRVTLL 681



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 191/391 (48%), Gaps = 19/391 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+ ++   PD  ++  ++   C   ++  A K L+ +  RGF  D  T  ++I + C +
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQK 272

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G +      F +++     P VI +T LI                   G+CK+G + QAF
Sbjct: 273 GYVNRVVGYFWKMVEMGLAPNVINFTALIN------------------GLCKQGSIKQAF 314

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISS 273
           + +  +  RG +P+V ++  L+  L   G  E+  +L  +++ S G +PNV TY+ +I+ 
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            C++ K   A  +L   +E+GL P+  +Y  LI  +CK G    A E +D M  +G  P+
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           I  YN I+   CK G+ D+A  +  K+S  G   +  +Y  + S      D  R+L   +
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN 494

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           +ML  G  PD  +Y +LIS  CR   + E+  L  +  S    PT  +Y  +I G+C+  
Sbjct: 495 KMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + ++++   M   GC P+  TY  LI G+
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGL 585



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 168/335 (50%), Gaps = 4/335 (1%)

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           +++ T LI    LE + ++ M+ +  M   + G + +A   V  ++++G      + N +
Sbjct: 138 IVSATALIGNKNLE-RANEVMQCM-VMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCV 195

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           L   + MG  E  E +  EM  RG+ P+ V++ +++ + C  G+  +A   L A  E+G 
Sbjct: 196 LDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGF 255

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
             D  +   +I A+C+ G ++  + +   M+  G  P+++N+  ++   CK G+  QA E
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFE 315

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCL 414
           + E++   G  PNV ++ T+   L   G   +A  +  +++ S G +P+  TY ++I+  
Sbjct: 316 LLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C++  ++ A  LL  M+     P   +Y  +I G CK      + E++  M ++G  PN 
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNI 435

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
            TY  +I+G+   G   EA  L N  VS+H +  D
Sbjct: 436 YTYNAIIDGLCKKGSLDEAYRLLNK-VSVHGLQAD 469



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 172/371 (46%), Gaps = 19/371 (5%)

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           ++  F +  +++ A  ++  ++++G      T N ++      G++E A  +F ++ +  
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
             P  +++ +++ A                   C  G V +A +++ ++  RG   D  +
Sbjct: 220 VSPDCVSFKLMVVAC------------------CNMGRVLEAEKWLNAMVERGFIVDNAT 261

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
             +++      G          +M+  GL PNV+ ++ LI+ LC+ G  + A ++L    
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIE-FLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            +G  P+ Y++  LI   CK G  + A   FL  + SDG  P++  Y  ++  +CK    
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           ++A  +  ++ + G  PN ++Y T+       G+ +RA  ++  M  +G  P+  TYN++
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  LC+ G +DEA  LL  +     +   ++Y I++   C+    N S+     M + G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 471 KPNETTYVLLI 481
            P+  +Y  LI
Sbjct: 502 TPDIHSYTTLI 512


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 190/392 (48%), Gaps = 24/392 (6%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +Y  L+ GFCKA + + A ++LD ++S G  P+VV +  +I  LC+ G +  A   F ++
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI 91

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
             D C P V TY+ L+ A    GQ  +A  L+ EM                 G  K   +
Sbjct: 92  GED-CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +    ++ +  RGC+ DVI+Y M+L         +E  +L+  +  R    NVVTY+ L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSL 206

Query: 271 ISSL--CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            ++L      +T +A+ +L    ++G  P+  +Y  ++   CK+ RLD A + L  M S 
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           GC  D V+Y  ++ AF   G    +LE+  ++   G   +  + N +      +GD   A
Sbjct: 267 GCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +   M  +G  P  +TYN+LI   C+    D AV LL  M    F+P VI+YN II  
Sbjct: 327 HQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           FC+ +R  E+  +   M + GC P+  +Y  L
Sbjct: 387 FCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 24/420 (5%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L S+ V E  +  L++   +AG+F ++L  ++ M +NG +P+VV+ T +I+      K +
Sbjct: 23  LGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVS 82

Query: 90  KAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           +A+     + +   P+V+ Y+ L+   CK+ Q   A  ++  +  +G SP+VVTYN +I 
Sbjct: 83  QALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALID 142

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
                  ++    +  ++ +  C+  VITYT+++                     CK   
Sbjct: 143 GFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDI------------------FCKNNS 184

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM--GKWEEGEKLMTEMISRGLEPNVVTY 267
           + +A++ + +LE R    +V++YN L   L      +  E   L+ +MI  G  PN V Y
Sbjct: 185 IDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNY 240

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             ++  LC++ + ++A  VL +   +G   D  SY  L+ A+   GR   ++E L  M+ 
Sbjct: 241 RTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLG 300

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
            G + D    N ++  FCK G+  +A ++F+ +   G  P+  +YNT+  A   +     
Sbjct: 301 SGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDT 360

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A+ ++ +M+    +P+ ITYNS+I   CR+   +EA G+   M      P  +SY  + L
Sbjct: 361 AVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTLKL 420



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 160/306 (52%), Gaps = 7/306 (2%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G CK G   QA + +  ++S G +P+V+ +  ++R L   GK  +   L    I     P
Sbjct: 39  GFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLHFRRIGEDCAP 97

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV TYS L+ +LC+ G+  +A  ++    +KG +P+  +Y+ LI  + K  RLD  +  L
Sbjct: 98  NVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLL 157

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   GC  D++ Y  IL  FCKN + D+A  +   L       NV +YN++F+AL ++
Sbjct: 158 KEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTA 213

Query: 383 -GDKI-RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            GD+   AL ++ +M+ +G  P+++ Y +++  LC++  +DEA  +L+ M S   +   +
Sbjct: 214 EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDV 273

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           SY I+++ F    R  +S+E+L  M   G   +  T  ++I      G   EA +L  ++
Sbjct: 274 SYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSM 333

Query: 501 VSMHAI 506
               +I
Sbjct: 334 YQRGSI 339



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 34/295 (11%)

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           +L+  ++  +  +G +     +      N V+Y IL+   C+ G+ + A+++L   K  G
Sbjct: 1   MLQIFVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG 60

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + P+   +  +I   C  G++  A+      I + C P++  Y+T++ A CK+G   +A 
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFR-RIGEDCAPNVYTYSTLVDALCKSGQPHEAY 119

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +  ++   GC PNV +YN +             L ++ EM  +G   D ITY  ++   
Sbjct: 120 GLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIF 179

Query: 415 CRDGMVDEAVGLLVDMESTRF---------------------------------RPTVIS 441
           C++  +DEA  LL  +E                                     RP  ++
Sbjct: 180 CKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVN 239

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           Y  ++L  CK  R++E+ +VL +M+ +GCK ++ +Y +L+      G   +++EL
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLEL 294



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 1/177 (0%)

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V+Y  ++  FCK G   QALE+ +++   G  PNV  + T+   L ++G   +AL +   
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFR 89

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
            + +   P+  TY++L+  LC+ G   EA GL+ +M      P V++YN +I GF K  R
Sbjct: 90  RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           ++E + +L  M ++GC+ +  TY ++++         EA  L NAL   + ++ ++ 
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSL 206


>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 521

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 213/446 (47%), Gaps = 33/446 (7%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F+     +  LI +  +  KF      +  M    CK    +   L+K F+   KS+   
Sbjct: 88  FNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFY---KSSLHE 144

Query: 93  RVMEILEKYG-----EPDVFAYNALISGFCKANQIELANKVL----DRLRSRGFSPDVVT 143
           RV+E+          +P + A +  ++   ++ QI+LA K L    + L+ R   P+   
Sbjct: 145 RVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVR---PNTCI 201

Query: 144 YNIMIGSLCSRGMIESAFKVFDQLLRDN-CKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           +NI++   C  G +ESA +V  ++ +     P VITY+ LI      G+  +A++L +EM
Sbjct: 202 FNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEM 261

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
                            +      PD ++Y++L++   + GK +   K+M  M S G +P
Sbjct: 262 -----------------VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDP 304

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           NV  YS+L++  C++G+ E+A +V    K  GL PD   Y  LI+ +C  GR+D A+E L
Sbjct: 305 NVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELL 364

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M    C  D V +N +L   C+ G  D+AL + E L+  G   N  SY  + + L   
Sbjct: 365 KEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQK 424

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G+  ++  ++  MLS+G  P   T N L+ CLC  GMVD AV  L  +    F P   S+
Sbjct: 425 GELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSW 484

Query: 443 NIIILGFCKTRRINESIEVLAAMFEK 468
             +I   C+ R++    E++  + EK
Sbjct: 485 AHLIEYICRERKLLFVFELVDELVEK 510



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 187/387 (48%), Gaps = 25/387 (6%)

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           + +E+ N V ++   +GF+ +  TY+ +I  L       +   +  Q+  + CK     +
Sbjct: 74  HALEIFNMVGEQ---KGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIF 130

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLESRGCQPDVISYNMLLRT 238
             L++        ++ +++              A Q  VR       +P + + +  L  
Sbjct: 131 LNLMKHFYKSSLHERVLEMF------------YAIQPIVRE------KPSLKAISTCLNI 172

Query: 239 LLNMGKWEEGEKLMTEMISR-GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT- 296
           L+   + +  +K +  +     + PN   ++IL+   C+ G  E A++V+   K+   + 
Sbjct: 173 LVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSY 232

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALE 355
           P+  +Y  LI   C +GRL  AIE  + M+S D  LPD + Y+ ++  FC  G AD+A +
Sbjct: 233 PNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARK 292

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I E +   GC PNV +Y+ + +     G    A  +  EM S G++PD + Y +LI+C C
Sbjct: 293 IMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFC 352

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
             G +DEA+ LL +M   + +   +++N+++ G C+  R +E++ +L  +  +G   N+ 
Sbjct: 353 GVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKG 412

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVS 502
           +Y +++  +   G   ++  L   ++S
Sbjct: 413 SYRIVLNFLCQKGELEKSCALLGLMLS 439



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 10/290 (3%)

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           E +G   +  +Y+ L+  L    K+   + L+ +M     + +   +  L+    +    
Sbjct: 84  EQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLH 143

Query: 281 EDAVDVLRA----AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD-GCLPDIV 335
           E  +++  A     +EK   P   +    ++   +  ++DLA + L Y+       P+  
Sbjct: 144 ERVLEMFYAIQPIVREK---PSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTC 200

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVG-CPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            +N ++   CK+G+ + ALE+  ++       PNV +Y+T+   L  +G    A+ +  E
Sbjct: 201 IFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEE 260

Query: 395 MLSKG-IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           M+SK  I PD +TY+ LI   C  G  D A  ++  M S    P V +Y++++ GFCK  
Sbjct: 261 MVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEG 320

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           R+ E+ EV   M   G KP+   Y  LI      G   EAMEL   +  M
Sbjct: 321 RLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEM 370



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 35/259 (13%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AAKEKGLTPDAYSYDPLISAYCKDG 313
           ++  G +   +++   I+ + R+   + A+++     ++KG   +  +Y  LI    +  
Sbjct: 47  LVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTK 106

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           +       L  M  + C      +  ++  F K+   ++ LE                  
Sbjct: 107 KFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLE------------------ 148

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            MF A+     +  +L  IS  L+  +E  +I       CL           L V+ E  
Sbjct: 149 -MFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQ--KCL-----------LYVN-EHL 193

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFE-KGCKPNETTYVLLIEGIGYGGWRAE 492
           + RP    +NI++   CK+  +  ++EV+  M + +   PN  TY  LI+G+   G   E
Sbjct: 194 KVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKE 253

Query: 493 AMELANALVSMHAISRDTF 511
           A+EL   +VS   I  D  
Sbjct: 254 AIELFEEMVSKDQILPDAL 272


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 29/469 (6%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L  +  +  +   IK   R G F+E++     M   G  P+ V C+  I+     ++S+ 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 91  AVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
               +  L     P D FAY A+I GFC   +++ A  V   + + G +PD   Y  +I 
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
           + C  G +  A  + + ++ +  K  ++           +   D  +  LDE+       
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVD--------QFKEFRDSGI-FLDEVLYNIVVD 391

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK G V +A + +  ++ R    DV+ Y  L+      GK  + + +  EM  RG+EP
Sbjct: 392 ALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEP 451

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++VTY+IL+    R+G  ++A+++L     +GL P++ +++ +I   C  G++  A  FL
Sbjct: 452 DIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFL 511

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG--------CPPNVSSYNT 374
           +  + D CL    NY+ ++  +CK     +A E+F +LS  G          PN   Y  
Sbjct: 512 N-TLEDKCLE---NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGK 567

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +  A    GD  RA  +   ++ +GI PD ITY  +I+  CR   + EA  +  DM+   
Sbjct: 568 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 627

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +P VI+Y +++ G  KT  + ++I +   M  +G +P+  TY  L+ G
Sbjct: 628 IKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 188/407 (46%), Gaps = 28/407 (6%)

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
           N+  LA     +L+  GF  +V TY  +I  LC   +      +  +++    K +V+ +
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLGF 132

Query: 180 TILIQATMLEG--------QTDKAMKLLDEM--GMCKKGMVGQAFQFVRSLESRGCQPDV 229
            I     +L           +   + +LD +     + GM  +A   +   + RG  P +
Sbjct: 133 DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHI 192

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +S N L+  L+  GK +    +   +   GL PN  TY I I +LCR G  E+AVDV R 
Sbjct: 193 MSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFRE 252

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            +E G+ P+A +    I   C   R DL  E L  + +     D   Y  ++  FC    
Sbjct: 253 MEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMK 312

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP------- 402
             +A ++F  + + G  P+   Y  +  A   +G+ ++A+ + ++M+S GI+        
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFK 372

Query: 403 ---------DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
                    DE+ YN ++  LC+ G V+EAV LL +M+  R    V+ Y  +I G+C   
Sbjct: 373 EFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQG 432

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++ ++  +   M E+G +P+  TY +L+ G    G + EA+EL + +
Sbjct: 433 KLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 479



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 191/417 (45%), Gaps = 45/417 (10%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +   + L+  + +    + A   L + + RGF P +++ N ++  L   G I+ A  ++ 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
            L R    P   TY I I+A   +G  ++A+ +  EM                 G+C   
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
                ++ +R+L +     D  +Y  ++R   +  K +E E +  +M++ G+ P+   Y 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 269 ILISSLCRDGKTEDAV----------------DVLRAAKEKGLTPDAYSYDPLISAYCKD 312
            LI + C+ G    AV                D  +  ++ G+  D   Y+ ++ A CK 
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           G+++ A+E L+ M       D+V+Y T++A +C  G    A  +FE++ + G  P++ +Y
Sbjct: 397 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 456

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N +      +G K  AL ++  + ++G++P+  T+N +I  LC  G V EA   L  +E 
Sbjct: 457 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 516

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG--------CKPNETTYVLLI 481
                 + +Y+ ++ G+CK     ++ E+ + + ++G         +PN+  Y  LI
Sbjct: 517 ----KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLI 569



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 26/278 (9%)

Query: 251 LMTEMISRGLEPNVVTYSILISSLCR---DGKTEDAVDVLRAAKEKGLTPDAYSY----- 302
             T++   G + NV TY+ LI  LCR   + K +  +  +  +KE  L  D  +      
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLR 142

Query: 303 ------------------DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
                             D L+ AY + G  D AI+ L      G +P I++ N ++   
Sbjct: 143 EGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRL 202

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            ++G  D A+ I+  L  +G  PN  +Y     AL   G+   A+ +  EM   G+ P+ 
Sbjct: 203 IEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNA 262

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +T ++ I  LC     D     L  + +  +     +Y  +I GFC   ++ E+ +V   
Sbjct: 263 VTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFID 322

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           M  +G  P+   Y  LI      G   +A+ L N +VS
Sbjct: 323 MVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 3/129 (2%)

Query: 30  LLSFDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
           +L+ DV+  Q M  KLI    R G    +    + +V  G  PDV+  T +I  + +   
Sbjct: 553 MLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 612

Query: 88  SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
             +A  +   +++ G +PDV  Y  ++ G  K N ++ A  + D + +RG  PD+VTY  
Sbjct: 613 LREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTA 672

Query: 147 MIGSLCSRG 155
           ++   C+ G
Sbjct: 673 LLPGKCNFG 681


>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 222/439 (50%), Gaps = 22/439 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           L++   R+   D +      M +NG + D+     L+    ++ + +++ +V + ++ K+
Sbjct: 240 LLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKH 299

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD + Y  +I    K  + E +  + + + ++G +P+++ YN MI +L   GM++ A 
Sbjct: 300 CNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAI 359

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F  ++++NC+P   TY+I++   + EGQ  +    LDE+       + ++        
Sbjct: 360 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGR----LDEVLEVSNKFINKSI------- 408

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                     Y  L+RTL  +G   E  +L   M S     +   Y  ++ SLCR GKT 
Sbjct: 409 ----------YAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTV 458

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A+++L    EKG++ D   Y+ ++S   K  ++    +  + M  DG  PDI  YN ++
Sbjct: 459 EAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILI 518

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
           ++  + G   +A+E+FE+L    C P++ SYN++ + L  +GD   A     EM  KG+ 
Sbjct: 519 SSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLN 578

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD +TY++LI C  +   V+ A  L   M +    P +++YNI++    +  R  E++++
Sbjct: 579 PDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDL 638

Query: 462 LAAMFEKGCKPNETTYVLL 480
            A + E+G  P+  TY +L
Sbjct: 639 YAKLREQGLTPDSITYAIL 657



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 165/391 (42%), Gaps = 39/391 (9%)

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE---SAFKVFDQLLRDNCKP 174
           + +Q+      +DR + RG    + T NI+I    S   +E      K +D  LR N   
Sbjct: 182 RIDQVREILSQMDRDQIRG---TISTVNILIKIFSSNEDLELCTGLIKKWD--LRLN--- 233

Query: 175 TVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNM 234
              TY  L+QA +    +D+A  +  EM                   S G Q D+ +YNM
Sbjct: 234 -AYTYRCLLQAHIRSRDSDRAFNVYMEMW------------------SNGYQLDIFAYNM 274

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           LL  L    + +   K+  +M  +   P+  TY+I+I    + G+ E+++ +      KG
Sbjct: 275 LLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKG 334

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA---D 351
            TP+  +Y+ +I A  K G +D AI     MI + C P+   Y+ IL      G     D
Sbjct: 335 CTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLD 394

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           + LE+  K        N S Y  +   L   G    A  +   M S     D   Y S++
Sbjct: 395 EVLEVSNKFI------NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISML 448

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             LCR G   EA+ LL  +         + YN ++    K ++++   ++   M + G  
Sbjct: 449 ESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPF 508

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           P+  TY +LI  +G  G   EA+E+   L S
Sbjct: 509 PDIFTYNILISSLGRVGKVKEAVEVFEELES 539


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 53  FD-ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           FD E+L     M+ +G  P V   + L+  F + R     + ++  +E +G +P+V++Y 
Sbjct: 300 FDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 359

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I    +A + + A ++L ++ + G  PDV+T+ ++I  LC  G I  A  VF ++ + 
Sbjct: 360 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 419

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           + KP  +TY  L+      G +   M++ + M                  +C+ G V +A
Sbjct: 420 DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 479

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G  P+  SYN L+   L   ++ +  +L   M   G +PN  T+ + I+ 
Sbjct: 480 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 539

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             + G++  A+      K KG+ PD  + + ++    K GRL +A      + + G  PD
Sbjct: 540 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 599

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            + Y  ++    K    D+A++IF  + +  C P+V + N++   L+ +G    A  +  
Sbjct: 600 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 659

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++    +EP + TYN+L++ L R+G V E + LL +M  + + P +I+YN I+   CK  
Sbjct: 660 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 719

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +N+++++L +M  KGC P+ ++Y  +I G+
Sbjct: 720 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 750



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 206/427 (48%), Gaps = 18/427 (4%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L+ +  M A+G KP+V   T  I+   Q ++ ++A R++  +E  G +PDV  +  LI  
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 399

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            C A +I  A  V  +++     PD VTY  ++      G  +S  ++++ +  D     
Sbjct: 400 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 459

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
           V+ YT +I A    G+  +A+++ DEM                 G  K    G A +  +
Sbjct: 460 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 519

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G +P+  ++ + +      G+  +  +    M S+G+ P+VV  + ++  L + G
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +   A  V    K  G++PD  +Y  +I    K  + D A++    MI + C+PD++  N
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++    K G  D+A  IF +L ++   P   +YNT+ + L   G     + ++ EM   
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ ITYN+++ CLC++G V++A+ +L  M +    P + SYN +I G  K  R NE+
Sbjct: 700 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 759

Query: 459 IEVLAAM 465
             +   M
Sbjct: 760 FSIFCQM 766



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 208/452 (46%), Gaps = 21/452 (4%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           ++  +  LI    +A +F ++L   + M  +G KP+       I  + +  +S KA++  
Sbjct: 494 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 553

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+++  G  PDV A NA++ G  K+ ++ +A +V   L++ G SPD +TY +MI      
Sbjct: 554 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 613

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A K+F  ++ +NC P V+    LI      G+ D+A ++  +             
Sbjct: 614 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ------------- 660

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                L+    +P   +YN LL  L   GK +E   L+ EM      PN++TY+ ++  L
Sbjct: 661 -----LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCL 715

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++G   DA+D+L +   KG  PD  SY+ +I    K+ R + A      M     +PD 
Sbjct: 716 CKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDY 774

Query: 335 VNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
               TIL +F K G   +AL I +      G   + SS +++   +       +++    
Sbjct: 775 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAE 834

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            + S GI  D+     LI  LC+     EA  L+   +S         YN +I G     
Sbjct: 835 IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDEN 894

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            I+ +  + A M E GC P+E TY LL++ +G
Sbjct: 895 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 926



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 214/494 (43%), Gaps = 55/494 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            R GK  E ++ +E M  +   P+++    ++    +    N A+ ++  +   G  PD+ 
Sbjct: 682  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 741

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF-DQ 166
            +YN +I G  K  +   A  +  +++ +   PD  T   ++ S    G+++ A  +  D 
Sbjct: 742  SYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDY 800

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKL----------LDEM-------GMCKKGM 209
             L+   K    +   L++  + +   +K+++           LD+         +CK+  
Sbjct: 801  FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 860

Query: 210  VGQAFQFVRSLES-----------------------------------RGCQPDVISYNM 234
              +A + V+  +S                                    GC PD  +YN+
Sbjct: 861  ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 920

Query: 235  LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            LL  +    + EE  K+  EM  +G E   VTY+ +IS L +  + E A+D+      +G
Sbjct: 921  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 980

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             +P   +Y PL+    K GR++ A    + M+  GC  +   YN +L      GN ++  
Sbjct: 981  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 1040

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             +F+ + D G  P++ SY  +   L  +G     L    ++L  G+EPD ITYN LI  L
Sbjct: 1041 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1100

Query: 415  CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +   ++EAV L  +M+     P + +YN +IL   K  +  E+ ++   +  KG KPN 
Sbjct: 1101 GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1160

Query: 475  TTYVLLIEGIGYGG 488
             TY  LI G    G
Sbjct: 1161 FTYNALIRGYSVSG 1174



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 234/551 (42%), Gaps = 88/551 (15%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR------ 93
            +  +IK   +A KFDE++     M+ N C PDV+    LI   ++  + ++A R      
Sbjct: 603  YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662

Query: 94   --------------------------VMEILEKYGE----PDVFAYNALISGFCKANQIE 123
                                      VM +LE+       P++  YN ++   CK   + 
Sbjct: 663  EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 722

Query: 124  LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ----LLRDNCK-----P 174
             A  +L  + ++G  PD+ +YN +I  L        AF +F Q    L+ D        P
Sbjct: 723  DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILP 782

Query: 175  TVITYTILIQA---------------------TMLEGQTDKA--------MKLLDEMG-- 203
            + +   ++ +A                     +++EG   KA         +++   G  
Sbjct: 783  SFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 842

Query: 204  ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                        +CK+    +A + V+  +S G       YN L+  L++    +  E L
Sbjct: 843  LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 902

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              EM   G  P+  TY++L+ ++ +  + E+ + V      KG      +Y+ +IS   K
Sbjct: 903  FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 962

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
              RL+ AI+    ++S G  P    Y  +L    K G  + A  +F ++ + GC  N + 
Sbjct: 963  SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 1022

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            YN + +    +G+  +   +  +M+ +GI PD  +Y  +I  LC+ G +++ +     + 
Sbjct: 1023 YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 1082

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                 P +I+YN++I G  K++R+ E++ +   M +KG  PN  TY  LI  +G  G  A
Sbjct: 1083 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1142

Query: 492  EAMELANALVS 502
            EA ++   L++
Sbjct: 1143 EAGKMYEELLT 1153



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 192/427 (44%), Gaps = 20/427 (4%)

Query: 49   RAGKFDESLYFIES-MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            + G   E+L+ I+   +  G K D   C  L++   ++    K++   EI+   G   D 
Sbjct: 786  KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDD 845

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            F    LI   CK  +   A++++ + +S G S     YN +I  L    +I+ A  +F +
Sbjct: 846  FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAE 905

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
            +    C P   TY +L+ A     + ++ +K+ +EM                    +G +
Sbjct: 906  MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM------------------HRKGYE 947

Query: 227  PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
               ++YN ++  L+   + E+   L   ++S+G  P   TY  L+  L + G+ EDA ++
Sbjct: 948  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 1007

Query: 287  LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                 E G   +   Y+ L++ +   G  +        M+  G  PDI +Y  I+   CK
Sbjct: 1008 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1067

Query: 347  NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             G  +  L  F +L ++G  P++ +YN +   L  S     A+ + +EM  KGI P+  T
Sbjct: 1068 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1127

Query: 407  YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            YNSLI  L + G   EA  +  ++ +  ++P V +YN +I G+  +   + +      M 
Sbjct: 1128 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1187

Query: 467  EKGCKPN 473
              GC PN
Sbjct: 1188 VGGCLPN 1194



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 205/446 (45%), Gaps = 22/446 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V  + A+  G      +  A   L  ++  G   +  TYN ++  L   G    A +V+
Sbjct: 249 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 308

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GMC 205
             ++ D   P+V TY++L+ A       +  + LL EM                   G  
Sbjct: 309 RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 368

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+    +A++ +  +E+ GC+PDVI++ +L++ L + G+  + + +  +M     +P+ V
Sbjct: 369 KR--FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRV 426

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  L+     +G ++  +++  A K  G   +  +Y  +I A C+ GR+  A+E  D M
Sbjct: 427 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 486

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G +P+  +YN++++ F K      ALE+F+ +   G  PN  ++    +    SG+ 
Sbjct: 487 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 546

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           I+A+     M SKGI PD +  N+++  L + G +  A  +  ++++    P  I+Y ++
Sbjct: 547 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 606

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I    K  + +E++++   M E  C P+      LI+ +   G   EA  +   L  M+ 
Sbjct: 607 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 666

Query: 506 ISRD-TFKRLNRTFPLLDVYKEISHL 530
              D T+  L          KE+ HL
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHL 692



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 178/379 (46%), Gaps = 18/379 (4%)

Query: 43   LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
            L++   +    ++S+ F E + ++G   D      LIK   +++K+ +A  +++  + +G
Sbjct: 816  LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 875

Query: 103  -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
                   YN+LI G    N I++A  +   ++  G  PD  TYN+++ ++     IE   
Sbjct: 876  VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 935

Query: 162  KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            KV +++ R   + T +TY  +I   +   + ++A+ L   +                 G+
Sbjct: 936  KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 995

Query: 205  CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
             K G +  A      +   GC+ +   YN+LL      G  E+   L  +M+ +G+ P++
Sbjct: 996  LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 1055

Query: 265  VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             +Y+I+I +LC+ G+  D +   R   E GL PD  +Y+ LI    K  RL+ A+   + 
Sbjct: 1056 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115

Query: 325  MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            M   G +P++  YN+++    K G A +A +++E+L   G  PNV +YN +      SG 
Sbjct: 1116 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175

Query: 385  KIRALGMISEMLSKGIEPD 403
               A      M+  G  P+
Sbjct: 1176 TDSAYAAYGRMIVGGCLPN 1194



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 22/373 (5%)

Query: 127 KVLDRLRSRGFSPDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + L+R RS    P V     + N M+  +   G +    +VFD + R   K  V T+  +
Sbjct: 197 EALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 256

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
                +EG    A   L  M   + G+V  A+                +YN L+  L+  
Sbjct: 257 FGGLGVEGGLRSAPVALPVMK--EAGIVLNAY----------------TYNGLVYFLVKS 298

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   E  ++   M+  G+ P+V TYS+L+ +  +    E  + +LR  +  G+ P+ YSY
Sbjct: 299 GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY 358

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
              I    +  R D A   L  M ++GC PD++ +  ++   C  G    A ++F K+  
Sbjct: 359 TICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKK 418

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P+  +Y T+      +GD    + + + M + G   + + Y ++I  LC+ G V E
Sbjct: 419 SDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFE 478

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ +  +M+     P   SYN +I GF K  R  +++E+   M   G KPN  T+VL I 
Sbjct: 479 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFIN 538

Query: 483 GIGYGGWRAEAME 495
             G  G   +A++
Sbjct: 539 YYGKSGESIKAIQ 551



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 35/301 (11%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S N +L  +   G+  +  ++   M  + ++ NV T++ +   L  +G    A   L   
Sbjct: 217 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 276

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           KE G+  +AY+Y+ L+    K G    A+E    M+ DG +P +  Y+ ++ AF K  + 
Sbjct: 277 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 336

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +  L +  ++   G  PNV SY      L  +     A  ++++M ++G +PD IT+  L
Sbjct: 337 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 396

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           I  LC  G + +A  +   M+ +  +P                                 
Sbjct: 397 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 456

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              V++Y  +I   C+  R+ E++E+   M +KG  P + +Y  LI G        +A+E
Sbjct: 457 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 516

Query: 496 L 496
           L
Sbjct: 517 L 517



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  D  +V    + + +  +  ++  +      +G L  A   L  M   G + +   Y
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++    K+G   +ALE++  +   G  P+V +Y+ +  A     D    L ++ EM +
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 348

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++P+  +Y   I  L +    DEA  +L  ME+   +P VI++ ++I   C   RI++
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 408

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRD 509
           + +V   M +   KP+  TY+ L++  G  G     ME+ NA+        V  +    D
Sbjct: 409 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 468

Query: 510 TFKRLNRTFPLLDVYKEISH 529
              ++ R F  L+++ E+  
Sbjct: 469 ALCQVGRVFEALEMFDEMKQ 488



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 19/233 (8%)

Query: 32   SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
             F      +  L+    +AG+ +++      M+  GCK +  +   L+        + K 
Sbjct: 980  GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 1039

Query: 92   VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
              + + +   G  PD+ +Y  +I   CKA Q+        +L   G  PD++TYN++I  
Sbjct: 1040 CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1099

Query: 151  LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            L     +E A  +F+++ +    P + TY  LI                  + + K G  
Sbjct: 1100 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLI------------------LHLGKAGKA 1141

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
             +A +    L ++G +P+V +YN L+R     G  +        MI  G  PN
Sbjct: 1142 AEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           DG  E       AA++  +     S + ++      GR+    E  D M       ++  
Sbjct: 193 DGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 252

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  I       G    A      + + G   N  +YN +   L  SG    AL +   M+
Sbjct: 253 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 312

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P   TY+ L+    +   V+  + LL +ME+   +P V SY I I    + +R +
Sbjct: 313 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 372

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
           E+  +LA M  +GCKP+  T+ +LI+
Sbjct: 373 EAYRILAKMENEGCKPDVITHTVLIQ 398


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 213/461 (46%), Gaps = 19/461 (4%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVL 129
           +V     LIK F       + + V   +++ G EP +F YN L++G   +  IE A +VL
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           + + +    PDVVTYN MI   C  G  + AF+ F  +   N  P  ITY  LIQA   E
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G  D  + L  EM                 G+CK+G   + +     +  +GC+ +V  Y
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             L+ +    G   E   L   M   GLEP+VVTY ++++ +C+ G+ ++A++ L   + 
Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 370

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G+  +A  Y  LI    K GR+  A +  + M+  GC PD   YN ++ A  K G  D+
Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDE 430

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL  F+++ D GC   V +Y  M + L+       AL M   M+ KGI P    + +L  
Sbjct: 431 ALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSI 490

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
            LC  G V  A  LL ++      P   ++  ++   CK  RI E+ ++     ++G + 
Sbjct: 491 GLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDRGREI 549

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKR 513
                 +LI  +   G    A++L ++ + +      + KR
Sbjct: 550 PGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKR 590



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 183/410 (44%), Gaps = 18/410 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V A N+LI  F     +E    V   ++  G  P + TYN ++  L +   IESA +V 
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           + +      P V+TY  +I+                  G C+ G   +AF+  R +E R 
Sbjct: 191 EVMENGKIGPDVVTYNTMIK------------------GYCQVGKTQKAFEKFRDMELRN 232

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             PD I+Y  L++     G ++    L  EM   GLE     YS++I  LC++GK  +  
Sbjct: 233 VAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGY 292

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            V     +KG   +   Y  LI +  K G +  A+   + M  +G  PD+V Y  ++   
Sbjct: 293 AVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCM 352

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+G  D+A+E  E     G   N   Y+++   L  +G    A  +  EM+ KG  PD 
Sbjct: 353 CKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDS 412

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
             YN+LI  L + G  DEA+     ME      TV +Y I+I G  +  +  E++++   
Sbjct: 413 YCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDM 472

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRL 514
           M +KG  P    +  L  G+   G  A A +L + L  M  I    F+ +
Sbjct: 473 MIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDM 522



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 24/365 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +M LI+  +  G FD  L     M  NG +      + +I    +E K  +   V E ++
Sbjct: 240 YMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMI 299

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           +K  + +V  Y ALI    K   +  A  + +R++  G  PDVVTY +++  +C  G ++
Sbjct: 300 QKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLD 359

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A +  +    +      + Y+ LI      G+  +A KL +EM                
Sbjct: 360 EAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEM---------------- 403

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +GC PD   YN L+  L   GK +E       M   G +  V TY+I+I+ L R+ 
Sbjct: 404 --VKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREH 461

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K E+A+ +     +KG+TP A ++  L    C  G++  A + LD +   G +P+   + 
Sbjct: 462 KNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETA-FE 520

Query: 339 TILAAFCKNGNADQALEIFEKLSDVG--CPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            +L   CK G   +A ++ +   D G   P  V +   + +AL  +G+   AL ++   +
Sbjct: 521 DMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRT--VLINALRKAGNADLALKLMHSKI 578

Query: 397 SKGIE 401
             G +
Sbjct: 579 GIGYD 583



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 158/380 (41%), Gaps = 54/380 (14%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +ES   +F         P  +++  ++++  L+ + D A+K     G  KK        +
Sbjct: 44  MESRLDLFCNKFLIKLSPNFVSF--VLKSMELQKRPDLALKFFTWAGKQKK--------Y 93

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
             +L+      DV++ N         G  +  + +  +    G   NV   + LI S   
Sbjct: 94  THNLQCYVSSIDVLAIN---------GDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGS 144

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
            G  E+ + V R  KE G+ P  ++Y+ L++       ++ A   L+ M +    PD+V 
Sbjct: 145 LGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVT 204

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           YNT++  +C+ G   +A E F  +      P+  +Y T+  A ++ GD    L +  EM 
Sbjct: 205 YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMD 264

Query: 397 SKGIEPDEITYNSLISCLCRDG--------------------------MVD--------- 421
             G+E     Y+ +I  LC++G                          ++D         
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 324

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA+ L   M+     P V++Y +++   CK+ R++E++E L      G   N   Y  LI
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLI 384

Query: 482 EGIGYGGWRAEAMELANALV 501
           +G+G  G   EA +L   +V
Sbjct: 385 DGLGKAGRVHEAEKLFEEMV 404



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 10/174 (5%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + GK DE+L F + M   GC   V   T +I   F+E K+ +A+++ +++   G
Sbjct: 418 LIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG 477

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P   A+ AL  G C + ++  A K+LD L   G  P+   +  M+  LC  G I+ A 
Sbjct: 478 ITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLCKAGRIKEAC 536

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL--------DEMGMCKK 207
           K+ D  +    +      T+LI A    G  D A+KL+        D MG  K+
Sbjct: 537 KLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKR 590


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 221/447 (49%), Gaps = 20/447 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + + I    R  +FD + ++   M   G        ++ I    Q ++      +++ +E
Sbjct: 47  YNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDME 106

Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K +  PD++A+N  ++   + N+ E A +V  R+  RG  PDVVT+ I+I  LC     +
Sbjct: 107 KLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFD 166

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A + +  +L    +P                  +KA   L  +G+C  G V  A++ + 
Sbjct: 167 AAVQFWLNMLDKGIRPD-----------------NKACVAL-AVGLCDGGQVDLAYELII 208

Query: 219 SLESRG-CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            + S G  +   + YN L+      G+ ++   +++ M   G +P++VTY++L++  C +
Sbjct: 209 GVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNE 268

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
              E+AV +L+  +   + PD YSY+ L+ A+CK    D A  F+   +      D+V+Y
Sbjct: 269 FMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSY 328

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           NTI+ AFC   N  +A ++FE++   G  P+V ++  +  A    G+   A  ++  M  
Sbjct: 329 NTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAG 388

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ PD I Y ++I   C+ G V+ A  +  DM      P V+SYN +I GFCK+ R+ E
Sbjct: 389 MGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGE 448

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGI 484
            + +   M ++G  P+E TY L+I  +
Sbjct: 449 VMHLYEQMLQRGSFPDEVTYKLIIGAL 475



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 183/379 (48%), Gaps = 22/379 (5%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDV 106
           FR  + + +L     MV  G +PDVV  T +I    + +K + AV+  + +L+K   PD 
Sbjct: 125 FRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDN 184

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSP-DVVTYNIMIGSLCSRGMIESAFKVFD 165
            A  AL  G C   Q++LA +++  + S G S    + YN +I   C  G I+ A  +  
Sbjct: 185 KACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVS 244

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGC 225
            + R  CKP ++TY +L+                     C + M  +A + ++ +E    
Sbjct: 245 FMSRTGCKPDLVTYNVLLNYC------------------CNEFMFEEAVKLLKKMECSAI 286

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLM-TEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           +PDV SYN LL+        ++    M T+M+ +G   +VV+Y+ +I + C       A 
Sbjct: 287 EPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRRAY 345

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +      KG+ PD  ++  LI A+ ++G  D+A + LD M   G LPD + Y TI+   
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK+G  + A  IF  + + G  P+V SYN + +    S      + +  +ML +G  PDE
Sbjct: 406 CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDE 465

Query: 405 ITYNSLISCLCRDGMVDEA 423
           +TY  +I  L R+  + +A
Sbjct: 466 VTYKLIIGALVRENKLSDA 484



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 175/381 (45%), Gaps = 20/381 (5%)

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           + Y   I S    G+I+ A KVFD++    C+   I Y   I   +   + D A     +
Sbjct: 10  LIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
           M                 G+C+          ++ +E   C PD+ ++N+ L  L    +
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENR 129

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            E   ++   M+ RG EP+VVT++I+I  LC+  K + AV       +KG+ PD  +   
Sbjct: 130 EESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVA 189

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDI--VNYNTILAAFCKNGNADQALEIFEKLSD 362
           L    C  G++DLA E +  +IS G L ++  + YN +++ FC+ G  D+AL +   +S 
Sbjct: 190 LAVGLCDGGQVDLAYELIIGVISGG-LSEVSTLVYNALISGFCRAGRIDKALAMVSFMSR 248

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
            GC P++ +YN + +   +      A+ ++ +M    IEPD  +YN L+   C+    D+
Sbjct: 249 TGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDK 308

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A   +V     +    V+SYN II  FC       + ++   M  KG  P+  T+ +LI+
Sbjct: 309 AYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIK 368

Query: 483 GIGYGGWRAEAMELANALVSM 503
                G    A +L + +  M
Sbjct: 369 AFLREGNSDMAKKLLDLMAGM 389



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 153/294 (52%), Gaps = 20/294 (6%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           +V    +  LI    RAG+ D++L  +  M   GCKPD+V    L+     E    +AV+
Sbjct: 217 EVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVK 276

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANK-VLDRLRSRGFSPDVVTYNIMIGSL 151
           +++ +E    EPDV++YN L+   CKAN  + A   ++ ++  +GF  DVV+YN +I + 
Sbjct: 277 LLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAF 335

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GM------ 204
           CS      A+K+F+++ R    P V+T+TILI+A + EG +D A KLLD M GM      
Sbjct: 336 CSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDR 395

Query: 205 ----------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                     CK G V  A      +  +G  PDV+SYN L+       +  E   L  +
Sbjct: 396 IFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQ 455

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
           M+ RG  P+ VTY ++I +L R+ K  DA  V     E+GLT D    + LI+A
Sbjct: 456 MLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINA 509



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  +I    ++GK + +      MV  G  PDVV    LI  F +  +  + + + E +L
Sbjct: 398 YTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQML 457

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           ++   PD   Y  +I    + N++  A +V D++  RG + D     ++I ++ S
Sbjct: 458 QRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQS 512


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 233/509 (45%), Gaps = 53/509 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R   + E+    + M A+G +PD V    L+  + + R+ ++A+ V++ +E+ G  P V 
Sbjct: 237 RRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV 296

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LIS + K   +E A  +   +  +G  PDVVTY  +I  L   G I++A   +D++
Sbjct: 297 TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM 356

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
           +R+ CKP + TY  LI+   + G+  + M + DE                     + G+ 
Sbjct: 357 VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLD 416

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +     + ++  G  P+  +Y  L+ +    G ++   ++   M+  G+ P+V TY+ +
Sbjct: 417 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 476

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +S+L R G+ E A  +    +E+   PD YSY  L+ AY    RLD      D + S+  
Sbjct: 477 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 536

Query: 331 LP-----------------------------------DIVNYNTILAAFCKNGNADQALE 355
            P                                   DI   N +++ + KN    +  +
Sbjct: 537 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 596

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I   + +     + ++YN++       GD  +   +++E+ S G+ PD  +YN++I    
Sbjct: 597 ILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYG 656

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G + EA  L  +M+ +  +P V++YNI +  +       E+IE++  M  +GCKPNE 
Sbjct: 657 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 716

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMH 504
           TY  ++EG    G   +A    + L  +H
Sbjct: 717 TYNSIVEGYCRNGKLTDAKIFVSNLPQLH 745



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 226/469 (48%), Gaps = 33/469 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    RAG+F +++     MV +G +P +V    ++  +     S  AV   E++E
Sbjct: 157 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVY-----SKMAVPWKEVVE 211

Query: 100 ------KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
                 ++G  PD + YN LIS   +    + A +V D +++ GF PD VT+N ++    
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
                + A +V  ++ R  C P+V+TY  LI + + +G  ++A+ L  EM          
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ + G +  A      +   GC+P++ +YN L++     GK+ E   +  E 
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S G  P++VT++ L++   ++G   +   V +  K+ G  P+  +Y  LIS+Y + G  
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           DLA++    M+  G  PD+  YN +L+A  + G  +QA ++F ++ +  C P+  SY+++
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511

Query: 376 FSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             A  ++   DK++AL    ++ S+ IEP      +L+    +   + EA    +++   
Sbjct: 512 LHAYANAKRLDKMKALS--DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 569

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           R    +   N ++  + K R + +  ++L+ M E     +  TY  L+ 
Sbjct: 570 RCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 618



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 223/477 (46%), Gaps = 38/477 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+  E+   +++  A G  PD    T L+  F +  +   AV V   +   G +P + 
Sbjct: 135 RAGRLAEASALLDA--APG--PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 190

Query: 108 AYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN ++  + K A   +   +++  ++  G +PD  TYN +I     R + + A +VFD+
Sbjct: 191 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 250

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     +P  +T+                  LLD  G  ++    +A + ++ +E  GC 
Sbjct: 251 MKASGFEPDKVTFN----------------SLLDVYGKARRH--DEAIEVIQEMERVGCP 292

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V++YN L+ + +  G  E+   L  EM  +G++P+VVTY+ LIS L R GK + A+  
Sbjct: 293 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE 352

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  P+  +Y+ LI  +   G+    +   D   S G +PDIV +NT+LA F +
Sbjct: 353 YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 412

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG   +   +F+++   G  P   +Y ++ S+    G    A+ +   M+  GI PD  T
Sbjct: 413 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 472

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+++S L R G  ++A  L  +ME    +P   SY+ ++  +   +R+++   +   ++
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 532

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            +  +P+               W  + + L N+ V+  A +   F  L +    LD+
Sbjct: 533 SERIEPH--------------NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDI 575



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD ++YN +I  + +  Q++ A+++   ++  G  PDVVTYNI + S  S  M E A ++
Sbjct: 643 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 702

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
              ++   CKP   TY  +++     G+   A   +  +     G   Q  Q
Sbjct: 703 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQ 754


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 53  FD-ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           FD E+L     M+ +G  P V   + L+  F + R     + ++  +E +G +P+V++Y 
Sbjct: 210 FDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 269

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I    +A + + A ++L ++ + G  PDV+T+ ++I  LC  G I  A  VF ++ + 
Sbjct: 270 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 329

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           + KP  +TY  L+      G +   M++ + M                  +C+ G V +A
Sbjct: 330 DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 389

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G  P+  SYN L+   L   ++ +  +L   M   G +PN  T+ + I+ 
Sbjct: 390 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 449

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             + G++  A+      K KG+ PD  + + ++    K GRL +A      + + G  PD
Sbjct: 450 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 509

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            + Y  ++    K    D+A++IF  + +  C P+V + N++   L+ +G    A  +  
Sbjct: 510 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 569

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++    +EP + TYN+L++ L R+G V E + LL +M  + + P +I+YN I+   CK  
Sbjct: 570 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 629

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +N+++++L +M  KGC P+ ++Y  +I G+
Sbjct: 630 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 19/458 (4%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L+ +  M A+G KP+V   T  I+   Q ++ ++A R++  +E  G +PDV  +  LI  
Sbjct: 250 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 309

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            C A +I  A  V  +++     PD VTY  ++      G  +S  ++++ +  D     
Sbjct: 310 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 369

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
           V+ YT +I A    G+  +A+++ DEM                 G  K    G A +  +
Sbjct: 370 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 429

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G +P+  ++ + +      G+  +  +    M S+G+ P+VV  + ++  L + G
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 489

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +   A  V    K  G++PD  +Y  +I    K  + D A++    MI + C+PD++  N
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++    K G  D+A  IF +L ++   P   +YNT+ + L   G     + ++ EM   
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ ITYN+++ CLC++G V++A+ +L  M +    P + SYN +I G  K  R NE+
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   M +K   P+  T   ++      G   EA+ +
Sbjct: 670 FSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHI 706



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 232/520 (44%), Gaps = 55/520 (10%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           ++  +  LI    +A +F ++L   + M  +G KP+       I  + +  +S KA++  
Sbjct: 404 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 463

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+++  G  PDV A NA++ G  K+ ++ +A +V   L++ G SPD +TY +MI      
Sbjct: 464 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 523

Query: 155 GMIESAFKVFDQLLRDNCKPTVI-----------------------------------TY 179
              + A K+F  ++ +NC P V+                                   TY
Sbjct: 524 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTY 583

Query: 180 TILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLES 222
             L+     EG+  + M LL+EM                  +CK G V  A   + S+ +
Sbjct: 584 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 643

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +GC PD+ SYN ++  L+   ++ E   +  +M  + L P+  T   ++ S  + G  ++
Sbjct: 644 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKE 702

Query: 283 AVDVLRAA-KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           A+ +++    + G   D  S   L+    K   ++ +IEF + + S G   D      ++
Sbjct: 703 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 762

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              CK   A +A E+ +K    G       YN++   L        A G+ +EM   G  
Sbjct: 763 KHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PDE TYN L+  + +   ++E + +  +M    +  T ++YN II G  K+RR+ ++I++
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 882

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
              +  +G  P   TY  L++G+   G   +A  L N ++
Sbjct: 883 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 922



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 19/427 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           + + YN L+    K+     A +V   +   G  P V TY++++ +   R  +E+   + 
Sbjct: 194 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 253

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++     KP V +YTI I+     GQ     K  DE           A++ +  +E+ G
Sbjct: 254 REMEAHGVKPNVYSYTICIRVL---GQA----KRFDE-----------AYRILAKMENEG 295

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C+PDVI++ +L++ L + G+  + + +  +M     +P+ VTY  L+     +G ++  +
Sbjct: 296 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 355

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           ++  A K  G   +  +Y  +I A C+ GR+  A+E  D M   G +P+  +YN++++ F
Sbjct: 356 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 415

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            K      ALE+F+ +   G  PN  ++    +    SG+ I+A+     M SKGI PD 
Sbjct: 416 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 475

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +  N+++  L + G +  A  +  ++++    P  I+Y ++I    K  + +E++++   
Sbjct: 476 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 535

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRLNRTFPLLDV 523
           M E  C P+      LI+ +   G   EA  +   L  M+    D T+  L         
Sbjct: 536 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 595

Query: 524 YKEISHL 530
            KE+ HL
Sbjct: 596 VKEVMHL 602



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 22/373 (5%)

Query: 127 KVLDRLRSRGFSPDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + L+R RS    P V     + N M+  +   G +    +VFD + R   K  V T+  +
Sbjct: 107 EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 166

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
                +EG    A   L  M   + G+V  A+                +YN L+  L+  
Sbjct: 167 FGGLGVEGGLRSAPVALPVMK--EAGIVLNAY----------------TYNGLVYFLVKS 208

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   E  ++   M+  G+ P+V TYS+L+ +  +    E  + +LR  +  G+ P+ YSY
Sbjct: 209 GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY 268

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
              I    +  R D A   L  M ++GC PD++ +  ++   C  G    A ++F K+  
Sbjct: 269 TICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKK 328

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P+  +Y T+      +GD    + + + M + G   + + Y ++I  LC+ G V E
Sbjct: 329 SDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFE 388

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ +  +M+     P   SYN +I GF K  R  +++E+   M   G KPN  T+VL I 
Sbjct: 389 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFIN 448

Query: 483 GIGYGGWRAEAME 495
             G  G   +A++
Sbjct: 449 YYGKSGESIKAIQ 461



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 185/460 (40%), Gaps = 88/460 (19%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR------ 93
           +  +IK   +A KFDE++     M+ N C PDV+    LI   ++  + ++A R      
Sbjct: 513 YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 572

Query: 94  --------------------------VMEILEKYGE----PDVFAYNALISGFCKANQIE 123
                                     VM +LE+       P++  YN ++   CK   + 
Sbjct: 573 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 632

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ----LLRDNCK-----P 174
            A  +L  + ++G  PD+ +YN +I  L        AF +F Q    L+ D        P
Sbjct: 633 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILP 692

Query: 175 TVITYTILIQA---------------------TMLEGQTDKA--------MKLLDEMG-- 203
           + +   ++ +A                     +++EG   KA         +++   G  
Sbjct: 693 SFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 752

Query: 204 ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                       +CK+    +A + V+  +S G       YN L+  L++    +  E L
Sbjct: 753 LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 812

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             EM   G  P+  TY++L+ ++ +  + E+ + V      KG      +Y+ +IS   K
Sbjct: 813 FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 872

Query: 312 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
             RL+ AI+    ++S G  P    Y  +L    K G  + A  +F ++ + GC  N + 
Sbjct: 873 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 932

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           YN + +    +G+  +   +  +M+ +GI PD  +Y  +I
Sbjct: 933 YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 35/301 (11%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S N +L  +   G+  +  ++   M  + ++ NV T++ +   L  +G    A   L   
Sbjct: 127 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 186

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           KE G+  +AY+Y+ L+    K G    A+E    M+ DG +P +  Y+ ++ AF K  + 
Sbjct: 187 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 246

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +  L +  ++   G  PNV SY      L  +     A  ++++M ++G +PD IT+  L
Sbjct: 247 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 306

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           I  LC  G + +A  +   M+ +  +P                                 
Sbjct: 307 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 366

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              V++Y  +I   C+  R+ E++E+   M +KG  P + +Y  LI G        +A+E
Sbjct: 367 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 426

Query: 496 L 496
           L
Sbjct: 427 L 427



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  D  +V    + + +  +  ++  +      +G L  A   L  M   G + +   Y
Sbjct: 139 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 198

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++    K+G   +ALE++  +   G  P+V +Y+ +  A     D    L ++ EM +
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 258

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++P+  +Y   I  L +    DEA  +L  ME+   +P VI++ ++I   C   RI++
Sbjct: 259 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 318

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRD 509
           + +V   M +   KP+  TY+ L++  G  G     ME+ NA+        V  +    D
Sbjct: 319 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 378

Query: 510 TFKRLNRTFPLLDVYKEISH 529
              ++ R F  L+++ E+  
Sbjct: 379 ALCQVGRVFEALEMFDEMKQ 398



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           DG  E       AA++  +     S + ++      GR+    E  D M       ++  
Sbjct: 103 DGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 162

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  I       G    A      + + G   N  +YN +   L  SG    AL +   M+
Sbjct: 163 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 222

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P   TY+ L+    +   V+  + LL +ME+   +P V SY I I    + +R +
Sbjct: 223 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 282

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
           E+  +LA M  +GCKP+  T+ +LI+
Sbjct: 283 EAYRILAKMENEGCKPDVITHTVLIQ 308


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 230/487 (47%), Gaps = 40/487 (8%)

Query: 13  NERVRVSSSAETRPNTHLL---SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCK 69
           NE +  SS + T    HL+    F V    F+ +++  FR  KF     + +++ A    
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF----MYGKAIQAAVKL 192

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
            DV    +L  +   +R                 P VF YN LI G CK  ++  A ++ 
Sbjct: 193 SDVGKGLELFNRMKHDRIY---------------PSVFIYNVLIDGLCKGKRMNDAEQLF 237

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           D + +R   P ++TYN +I   C  G  E +FKV +++  D+ +P++IT+  L++     
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK----- 292

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                        G+ K GMV  A   ++ ++  G  PD  ++++L     +  K E   
Sbjct: 293 -------------GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
            +    +  G++ N  T SIL+++LC++GK E A ++L     KGL P+   Y+ +I  Y
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C+ G L  A   ++ M   G  PD + YN ++  FC+ G  + A +   K+   G  P+V
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +YN +        +  +   ++ EM   G  P+ ++Y +LI+CLC+   + EA  +  D
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           ME     P V  YN++I G C   +I ++      M +KG + N  TY  LI+G+   G 
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579

Query: 490 RAEAMEL 496
            +EA +L
Sbjct: 580 LSEAEDL 586



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 218/455 (47%), Gaps = 36/455 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK +++   +   +A G  P+ V+   +I  + ++     A   +E +EK G +PD  
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN LI  FC+  ++E A K +++++ +G SP V TYNI+IG    +   +  F +  ++
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
             +   P V++Y  LI                    +CK   + +A    R +E RG  P
Sbjct: 486 EDNGTMPNVVSYGTLINC------------------LCKGSKLLEAQIVKRDMEDRGVSP 527

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
            V  YNML+    + GK E+  +   EM+ +G+E N+VTY+ LI  L   GK  +A D+L
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
                KGL PD ++Y+ LIS Y   G +   I   + M   G  P +  Y+ +++   K 
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647

Query: 348 GNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           G     +E+ E+L  ++   P++  YN +       GD  +A  +  +M+ K I  D+ T
Sbjct: 648 G-----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YNSLI    + G + E   L+ +M +    P   +YNII+ G C+ +    +      M 
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQ 762

Query: 467 EKG-----CKPNETTYVLLIEGIGYGGWRAEAMEL 496
           EKG     C  NE     L+ G+    WR++  E+
Sbjct: 763 EKGFLLDVCIGNE-----LVSGLKE-EWRSKEAEI 791



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 224/488 (45%), Gaps = 57/488 (11%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
           +  + +++    + M+A    P ++    LI  + +     K+ +V E ++  + EP + 
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            +N L+ G  KA  +E A  VL  ++  GF PD  T++I+     S    E+A  V++  
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLD-EM----------------GMCKKGMV 210
           +    K    T +IL+ A   EG+ +KA ++L  EM                G C+KG +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK-------------------- 250
             A   + ++E +G +PD ++YN L+R    +G+ E  EK                    
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 251 ---------------LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
                          ++ EM   G  PNVV+Y  LI+ LC+  K  +A  V R  +++G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALE 355
           +P    Y+ LI   C  G+++ A  F   M+  G   ++V YNT++      G   +A +
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           +  ++S  G  P+V +YN++ S    +G+  R + +  EM   GI+P   TY+ LIS   
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           ++G ++    L  +M     +P ++ YN ++  +     + ++  +   M EK    ++T
Sbjct: 646 KEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701

Query: 476 TYVLLIEG 483
           TY  LI G
Sbjct: 702 TYNSLILG 709



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 170/379 (44%), Gaps = 18/379 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F+Y  L     ++  I  A  +   LR+ G  P   +  +++  L           VF  
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +L  + +P+   Y   IQA         A+KL D         VG+  +    ++     
Sbjct: 170 ILESDFRPSKFMYGKAIQA---------AVKLSD---------VGKGLELFNRMKHDRIY 211

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V  YN+L+  L    +  + E+L  EM++R L P+++TY+ LI   C+ G  E +  V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               K   + P   +++ L+    K G ++ A   L  M   G +PD   ++ +   +  
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           N  A+ AL ++E   D G   N  + + + +AL   G   +A  ++   ++KG+ P+E+ 
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN++I   CR G +  A   +  ME    +P  ++YN +I  FC+   +  + + +  M 
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 467 EKGCKPNETTYVLLIEGIG 485
            KG  P+  TY +LI G G
Sbjct: 452 LKGVSPSVETYNILIGGYG 470



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 8/294 (2%)

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKW-EEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           SL S   + D  SY +LL  LLN  K   E   L   + + G+ P+  + ++L+  L + 
Sbjct: 100 SLSSPSLKHD-FSY-LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKT 157

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +    ++V     E    P  + Y   I A  K   +   +E  + M  D   P +  Y
Sbjct: 158 KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIY 217

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++   CK    + A ++F+++      P++ +YNT+      +G+  ++  +   M +
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
             IEP  IT+N+L+  L + GMV++A  +L +M+   F P   +++I+  G+    +   
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGG--WRAEAM---ELANALVSMHAI 506
           ++ V     + G K N  T  +L+  +   G   +AE +   E+A  LV    I
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 9/170 (5%)

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +A ++F  L + G  P+  S   +   L  +      + +   +L     P +  Y   I
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
               +   V + + L   M+  R  P+V  YN++I G CK +R+N++ ++   M  +   
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246

Query: 472 PNETTYVLLIEGIGYGG---------WRAEAMELANALVSMHAISRDTFK 512
           P+  TY  LI+G    G          R +A  +  +L++ + + +  FK
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296


>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Brachypodium distachyon]
          Length = 837

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 221/478 (46%), Gaps = 46/478 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFA 108
           + GK D ++  +  M   G +P     + L+  F ++ + +KA   ME+ +K G     A
Sbjct: 257 KWGKVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKA---MEMFDKMGSYGFVA 313

Query: 109 ----YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
               Y+ LI G C+  +I  A K+ + ++    +PD      M+ + C  G    A    
Sbjct: 314 GLPMYSVLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFI 373

Query: 165 DQLLRDNCKPT--VITYTILIQATMLEGQTDKAMKLLDEM-------------------- 202
           ++  R   KP+  +  + ++++  +  GQ + A +LL  M                    
Sbjct: 374 NENAR-QLKPSGVIALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDI 432

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK   +  A   ++ +   GC+  ++ +N L+  L ++ + +
Sbjct: 433 SEDVKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLD 492

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           EG K+   M + GL P+  TY+ L   +CR      A+D+LR  +  G  P   +   ++
Sbjct: 493 EGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMV 552

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              C  GR+  A++FLD M+  G LPDIV Y+  +   CK G  D AL IF  +S     
Sbjct: 553 QQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYL 612

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+V ++N + +    SG    A  ++ EML KG+ P  +TYN +I   C+ G +++A+  
Sbjct: 613 PDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIAC 672

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           L  M      PTV++Y  +I G C T R +E+I +   M +KGC PN+  Y   + G+
Sbjct: 673 LNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGL 730



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 33/417 (7%)

Query: 18  VSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTK 77
           V  S + +PN+   SF++      K+        K D +L  I+ M   GCK  ++M   
Sbjct: 430 VDISEDVKPNSD--SFNIVVCGLCKV-------KKLDNALALIKDMTGIGCKGKLLMFND 480

Query: 78  LIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI +     + ++  ++  +++  G  P  F YN+L  G C+      A  +L  +R+ G
Sbjct: 481 LIHELCSLDRLDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNG 540

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P +     M+  LC  G I  A +  D++L+    P ++TY+  +             
Sbjct: 541 HRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMN------------ 588

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G V  A    R + S+   PDV+++N+L+      GK  E +++M EM+
Sbjct: 589 ------GLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEML 642

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            +GL P++VTY+++I   C+ G  E A+  L    ++  +P   +Y  LI   C  GR D
Sbjct: 643 EKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPD 702

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            AI     M+  GC P+ + Y   +   CK    D AL  +E++   G   +  S     
Sbjct: 703 EAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFI 762

Query: 377 SALWSSGDKIRALGMISEMLSKGI-EPDEITYNSLISC----LCRDGMVDEAVGLLV 428
           + L S+G+  +   ++ E+L K I    ++    LI+     L +DG     + +LV
Sbjct: 763 NFLISTGNATKGCELLKEVLQKDITHSGDLKMAGLINKAVEELSKDGSTSPDINILV 819



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 181/378 (47%), Gaps = 19/378 (5%)

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
              V++I E   +P+  ++N ++ G CK  +++ A  ++  +   G    ++ +N +I  
Sbjct: 426 GAHVVDISEDV-KPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHE 484

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LCS   ++  +K+F+ +      P+  TY  L                    G+C++   
Sbjct: 485 LCSLDRLDEGYKMFNLMKNLGLIPSEFTYNSLF------------------YGICRRKDP 526

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             A   +R + + G +P + +   +++ L   G+  E  + + EM+  G  P++VTYS  
Sbjct: 527 NCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAA 586

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ LC+ G+ ++A+ + R    K   PD  +++ LI+ +   G+L  A E ++ M+  G 
Sbjct: 587 MNGLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGL 646

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P IV YN ++  +CK+GN ++A+    K+ D    P V +Y ++   L S+G    A+ 
Sbjct: 647 FPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIA 706

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +  +M+ KG  P++I Y + ++ LC+   VD A+    +M +  F     S    I    
Sbjct: 707 LWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFINFLI 766

Query: 451 KTRRINESIEVLAAMFEK 468
            T    +  E+L  + +K
Sbjct: 767 STGNATKGCELLKEVLQK 784



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 201/450 (44%), Gaps = 39/450 (8%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+ D++    E M   G   + V+ T L   F +  K + AV ++  +E  G  P    
Sbjct: 224 AGRPDDANGVFERMSQRGWVDEHVL-TILAVAFSKWGKVDGAVELLGRMELLGMRPSEKT 282

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
            + L+ GF K  +++ A ++ D++ S GF   +  Y+++I  LC +  I  A K+F+++ 
Sbjct: 283 LSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIGKAVKLFEEMK 342

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           R    P       +++A   EG    A   ++E                R L+  G    
Sbjct: 343 RGEVAPDARLLKKMLEAFCREGDFAIAGLFINENA--------------RQLKPSGV--- 385

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA--VDV 286
           +  +N++L   +N G+ E   +L+T MI  G                 DG T  A  VD+
Sbjct: 386 IALFNVVLEGFVNHGQAEAAYQLLTSMIRGG-------------QGISDGVTVGAHVVDI 432

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
               K     P++ S++ ++   CK  +LD A+  +  M   GC   ++ +N ++   C 
Sbjct: 433 SEDVK-----PNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCS 487

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
               D+  ++F  + ++G  P+  +YN++F  +    D   AL ++ +M + G  P    
Sbjct: 488 LDRLDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKN 547

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
              ++  LC  G + EA+  L +M    F P +++Y+  + G CKT  ++ ++ +   + 
Sbjct: 548 CTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDIS 607

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            K   P+   + +LI G    G  +EA E+
Sbjct: 608 SKYYLPDVVAHNILINGFRISGKLSEAQEV 637



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/425 (21%), Positives = 176/425 (41%), Gaps = 47/425 (11%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRL--RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
           P+ + +N L+    KA + + A   L  +  R    S D  T   ++   C+ G  + A 
Sbjct: 172 PNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGDESVDKYTLTSLLQCYCNAGRPDDAN 231

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            VF+++ +                    G  D+ +  +  +   K G V  A + +  +E
Sbjct: 232 GVFERMSQ-------------------RGWVDEHVLTILAVAFSKWGKVDGAVELLGRME 272

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
             G +P   + ++L+       + ++  ++  +M S G    +  YS+LI  LC+  +  
Sbjct: 273 LLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIG 332

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD----YMISDGCLPDIVNY 337
            AV +    K   + PDA     ++ A+C++G   +A  F++     +   G    I  +
Sbjct: 333 KAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFINENARQLKPSGV---IALF 389

Query: 338 NTILAAFCKNGNADQALEIF-------EKLSD---VGC---------PPNVSSYNTMFSA 378
           N +L  F  +G A+ A ++        + +SD   VG           PN  S+N +   
Sbjct: 390 NVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSDSFNIVVCG 449

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L        AL +I +M   G +   + +N LI  LC    +DE   +   M++    P+
Sbjct: 450 LCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKNLGLIPS 509

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
             +YN +  G C+ +  N ++++L  M   G +P       +++ +   G   EA++  +
Sbjct: 510 EFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLD 569

Query: 499 ALVSM 503
            ++ M
Sbjct: 570 EMLKM 574



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 83/174 (47%), Gaps = 17/174 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           ++G  ++++  +  M+     P VV  T LI       + ++A+ +   +++K   P+  
Sbjct: 662 KSGNIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKI 721

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AY A ++G CK  +++ A    + + ++GF  D  +    I  L S G      ++  ++
Sbjct: 722 AYTAFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFINFLISTGNATKGCELLKEV 781

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------MCKKGMVGQA 213
           L+ +     IT++  ++   + G  +KA++ L + G        + +KG+V +A
Sbjct: 782 LQKD-----ITHSGDLK---MAGLINKAVEELSKDGSTSPDINILVQKGLVSRA 827


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 233/509 (45%), Gaps = 53/509 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R   + E+    + M A+G +PD V    L+  + + R+ ++A+ V++ +E+ G  P V 
Sbjct: 255 RRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVV 314

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN+LIS + K   +E A  +   +  +G  PDVVTY  +I  L   G I++A   +D++
Sbjct: 315 TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM 374

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
           +R+ CKP + TY  LI+   + G+  + M + DE                     + G+ 
Sbjct: 375 VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLD 434

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +     + ++  G  P+  +Y  L+ +    G ++   ++   M+  G+ P+V TY+ +
Sbjct: 435 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 494

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +S+L R G+ E A  +    +E+   PD YSY  L+ AY    RLD      D + S+  
Sbjct: 495 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554

Query: 331 LP-----------------------------------DIVNYNTILAAFCKNGNADQALE 355
            P                                   DI   N +++ + KN    +  +
Sbjct: 555 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 614

Query: 356 IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
           I   + +     + ++YN++       GD  +   +++E+ S G+ PD  +YN++I    
Sbjct: 615 ILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYG 674

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           R G + EA  L  +M+ +  +P V++YNI +  +       E+IE++  M  +GCKPNE 
Sbjct: 675 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 734

Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMH 504
           TY  ++EG    G   +A    + L  +H
Sbjct: 735 TYNSIVEGYCRNGKLTDAKIFVSNLPQLH 763



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 226/469 (48%), Gaps = 33/469 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+    RAG+F +++     MV +G +P +V    ++  +     S  AV   E++E
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVY-----SKMAVPWKEVVE 229

Query: 100 ------KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
                 ++G  PD + YN LIS   +    + A +V D +++ GF PD VT+N ++    
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
                + A +V  ++ R  C P+V+TY  LI + + +G  ++A+ L  EM          
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ + G +  A      +   GC+P++ +YN L++     GK+ E   +  E 
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
            S G  P++VT++ L++   ++G   +   V +  K+ G  P+  +Y  LIS+Y + G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
           DLA++    M+  G  PD+  YN +L+A  + G  +QA ++F ++ +  C P+  SY+++
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 376 FSALWSSG--DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             A  ++   DK++AL    ++ S+ IEP      +L+    +   + EA    +++   
Sbjct: 530 LHAYANAKRLDKMKALS--DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           R    +   N ++  + K R + +  ++L+ M E     +  TY  L+ 
Sbjct: 588 RCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 223/477 (46%), Gaps = 38/477 (7%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           RAG+  E+   +++  A G  PD    T L+  F +  +   AV V   +   G +P + 
Sbjct: 153 RAGRLAEASALLDA--APG--PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 208

Query: 108 AYNALISGFCK-ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN ++  + K A   +   +++  ++  G +PD  TYN +I     R + + A +VFD+
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           +     +P  +T+                  LLD  G  ++    +A + ++ +E  GC 
Sbjct: 269 MKASGFEPDKVTFN----------------SLLDVYGKARRH--DEAIEVIQEMERVGCP 310

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P V++YN L+ + +  G  E+   L  EM  +G++P+VVTY+ LIS L R GK + A+  
Sbjct: 311 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE 370

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                  G  P+  +Y+ LI  +   G+    +   D   S G +PDIV +NT+LA F +
Sbjct: 371 YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 430

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           NG   +   +F+++   G  P   +Y ++ S+    G    A+ +   M+  GI PD  T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           YN+++S L R G  ++A  L  +ME    +P   SY+ ++  +   +R+++   +   ++
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            +  +P+               W  + + L N+ V+  A +   F  L +    LD+
Sbjct: 551 SERIEPH--------------NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDI 593



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD ++YN +I  + +  Q++ A+++   ++  G  PDVVTYNI + S  S  M E A ++
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
              ++   CKP   TY  +++     G+   A   +  +     G   Q  Q
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQ 772


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 238/519 (45%), Gaps = 56/519 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDV--VMCTKLIKKFFQERKSNKAVRVMEI 97
           +  +IK   + GK D+    +  ++  G +     V    L+    +  + ++A+R+   
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +E+    P +  +  LI+G  ++++      +L  +   G +P+ V  N +I   C +G 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMC-------- 205
              A ++FD+++    K T +TY ++ +A   EG+ ++A ++L+EM   GM         
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 206 -------KKGMVGQAFQFVRSLESRGCQPD------------------------------ 228
                  + G +    + +  +  RG +P+                              
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK 471

Query: 229 -----VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
                + + N L+  L      +   +++  M+++G+E + +TY+I+I   C+D K E+A
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
           + +      KG  PDAY ++ +I AYC  G+++ A+  L  M  +G  PD+V+Y TI+  
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           +CK  +  +A E   +L   G  PN   YN +      +G+   A+G++  M S GI+P 
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TY SL+  +C  G+VDEA  +            V+ Y I+I G CK  +++E++    
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFE 711

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            M  +   PN+ TY  L+      G   EA +L + +VS
Sbjct: 712 EMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVS 750



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 183/386 (47%), Gaps = 26/386 (6%)

Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK---PTVIT 178
           + LA      L SR  SP V T N ++ +L   G + +  KVFD++ RD CK   P   +
Sbjct: 174 LRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEM-RD-CKTVTPNGYS 231

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV--ISYNMLL 236
           YT +I+A                  +CK G V   F+ +  L   G Q     + YN+L+
Sbjct: 232 YTSMIKA------------------LCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLM 273

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
             L   G+ +E  +L   M    + P++VT+ ILI+ L R  +  +   +LR  +  G+T
Sbjct: 274 DALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGIT 333

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+    + LI  +C+ G    AI   D M+S       V YN I  A CK G  ++A  I
Sbjct: 334 PNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERI 393

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA-LGMISEMLSKGIEPDEITYNSLISCLC 415
            E++   G   +   +N++ + L     ++ + + +ISEM+ +G++P++    +    LC
Sbjct: 394 LEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453

Query: 416 RDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
           +     EAVG+ + M        + + N +I G C+ + +  + EVL  M  KG + +  
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513

Query: 476 TYVLLIEGIGYGGWRAEAMELANALV 501
           TY ++I+G        EA++L + ++
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMI 539



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 3/193 (1%)

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSS 371
           G L LA++    + S    P +   N +L A  + GN     ++F+++ D     PN  S
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDE--ITYNSLISCLCRDGMVDEAVGLLVD 429
           Y +M  AL   G       ++S+++  G++     + YN L+  LC+ G VDEA+ L   
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           ME +R  P+++++ I+I G  ++ R  E   +L  M   G  PNE     LI+     G 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 490 RAEAMELANALVS 502
             EA+ L + +VS
Sbjct: 352 FTEAIRLFDEMVS 364



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 38/245 (15%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS-DGCLPDIVN 336
           G    AVD       +  +P   + + L+ A  + G L    +  D M       P+  +
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS--YNTMFSALWSSG---DKIRALG- 390
           Y +++ A CK G  D   +I   L   G   +  +  YN +  AL  SG   + IR  G 
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 391 -------------------------------MISEMLSKGIEPDEITYNSLISCLCRDGM 419
                                          ++ EM   GI P+E+  N LI   CR G 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
             EA+ L  +M S   + T ++YN+I    CK   +  +  +L  M   G   +   +  
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 480 LIEGI 484
           ++ G+
Sbjct: 412 VVAGL 416


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 53  FD-ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           FD E+L     M+ +G  P V   + L+  F + R     + ++  +E +G +P+V++Y 
Sbjct: 175 FDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 234

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I    +A + + A ++L ++ + G  PDV+T+ ++I  LC  G I  A  VF ++ + 
Sbjct: 235 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 294

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           + KP  +TY  L+      G +   M++ + M                  +C+ G V +A
Sbjct: 295 DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 354

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G  P+  SYN L+   L   ++ +  +L   M   G +PN  T+ + I+ 
Sbjct: 355 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 414

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             + G++  A+      K KG+ PD  + + ++    K GRL +A      + + G  PD
Sbjct: 415 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 474

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            + Y  ++    K    D+A++IF  + +  C P+V + N++   L+ +G    A  +  
Sbjct: 475 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFY 534

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++    +EP + TYN+L++ L R+G V E + LL +M  + + P +I+YN I+   CK  
Sbjct: 535 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 594

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +N+++++L +M  KGC P+ ++Y  +I G+
Sbjct: 595 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 625



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 19/458 (4%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L+ +  M A+G KP+V   T  I+   Q ++ ++A R++  +E  G +PDV  +  LI  
Sbjct: 215 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 274

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            C A +I  A  V  +++     PD VTY  ++      G  +S  ++++ +  D     
Sbjct: 275 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 334

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
           V+ YT +I A    G+  +A+++ DEM                 G  K    G A +  +
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G +P+  ++ + +      G+  +  +    M S+G+ P+VV  + ++  L + G
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +   A  V    K  G++PD  +Y  +I    K  + D A++    MI + C+PD++  N
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++    K G  D+A  IF +L ++   P   +YNT+ + L   G     + ++ EM   
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ ITYN+++ CLC++G V++A+ +L  M +    P + SYN +I G  K  R NE+
Sbjct: 575 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   M +K   P+  T   ++      G   EA+ +
Sbjct: 635 FSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHI 671



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 208/452 (46%), Gaps = 21/452 (4%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           ++  +  LI    +A +F ++L   + M  +G KP+       I  + +  +S KA++  
Sbjct: 369 EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 428

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+++  G  PDV A NA++ G  K+ ++ +A +V   L++ G SPD +TY +MI      
Sbjct: 429 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 488

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A K+F  ++ +NC P V+    LI      G+ D+A ++  +             
Sbjct: 489 SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ------------- 535

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                L+    +P   +YN LL  L   GK +E   L+ EM      PN++TY+ ++  L
Sbjct: 536 -----LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCL 590

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++G   DA+D+L +   KG  PD  SY+ +I    K+ R + A      M     +PD 
Sbjct: 591 CKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDY 649

Query: 335 VNYNTILAAFCKNGNADQALEIFEK-LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
               TIL +F K G   +AL I +      G   + SS +++   +       +++    
Sbjct: 650 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAE 709

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            + S GI  D+     LI  LC+     EA  L+   +S         YN +I G     
Sbjct: 710 IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDEN 769

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            I+ +  + A M E GC P+E TY LL++ +G
Sbjct: 770 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 801



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 197/434 (45%), Gaps = 20/434 (4%)

Query: 49   RAGKFDESLYFIES-MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            + G   E+L+ I+   +  G K D   C  L++   ++    K++   EI+   G   D 
Sbjct: 661  KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDD 720

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            F    LI   CK  +   A++++ + +S G S     YN +I  L    +I+ A  +F +
Sbjct: 721  FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAE 780

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
            +    C P   TY +L+ A     + ++ +K+ +EM                    +G +
Sbjct: 781  MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM------------------HRKGYE 822

Query: 227  PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
               ++YN ++  L+   + E+   L   ++S+G  P   TY  L+  L + G+ EDA ++
Sbjct: 823  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 882

Query: 287  LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                 E G   +   Y+ L++ +   G  +        M+  G  PDI +Y  I+   CK
Sbjct: 883  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 942

Query: 347  NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             G  +  L  F +L ++G  P++ +YN +   L  S     A+ + +EM  KGI P+  T
Sbjct: 943  AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1002

Query: 407  YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            YNSLI  L + G   EA  +  ++ +  ++P V +YN +I G+  +   + +      M 
Sbjct: 1003 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1062

Query: 467  EKGCKPNETTYVLL 480
              GC PN +TY+ L
Sbjct: 1063 VGGCLPNSSTYMQL 1076



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 214/494 (43%), Gaps = 55/494 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            R GK  E ++ +E M  +   P+++    ++    +    N A+ ++  +   G  PD+ 
Sbjct: 557  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 616

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF-DQ 166
            +YN +I G  K  +   A  +  +++ +   PD  T   ++ S    G+++ A  +  D 
Sbjct: 617  SYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDY 675

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKL----------LDEM-------GMCKKGM 209
             L+   K    +   L++  + +   +K+++           LD+         +CK+  
Sbjct: 676  FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 735

Query: 210  VGQAFQFVRSLES-----------------------------------RGCQPDVISYNM 234
              +A + V+  +S                                    GC PD  +YN+
Sbjct: 736  ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 795

Query: 235  LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            LL  +    + EE  K+  EM  +G E   VTY+ +IS L +  + E A+D+      +G
Sbjct: 796  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             +P   +Y PL+    K GR++ A    + M+  GC  +   YN +L      GN ++  
Sbjct: 856  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 915

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             +F+ + D G  P++ SY  +   L  +G     L    ++L  G+EPD ITYN LI  L
Sbjct: 916  HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975

Query: 415  CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +   ++EAV L  +M+     P + +YN +IL   K  +  E+ ++   +  KG KPN 
Sbjct: 976  GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1035

Query: 475  TTYVLLIEGIGYGG 488
             TY  LI G    G
Sbjct: 1036 FTYNALIRGYSVSG 1049



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 234/551 (42%), Gaps = 88/551 (15%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR------ 93
            +  +IK   +A KFDE++     M+ N C PDV+    LI   ++  + ++A R      
Sbjct: 478  YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537

Query: 94   --------------------------VMEILEKYGE----PDVFAYNALISGFCKANQIE 123
                                      VM +LE+       P++  YN ++   CK   + 
Sbjct: 538  EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 597

Query: 124  LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ----LLRDNCK-----P 174
             A  +L  + ++G  PD+ +YN +I  L        AF +F Q    L+ D        P
Sbjct: 598  DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILP 657

Query: 175  TVITYTILIQA---------------------TMLEGQTDKA--------MKLLDEMG-- 203
            + +   ++ +A                     +++EG   KA         +++   G  
Sbjct: 658  SFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 717

Query: 204  ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                        +CK+    +A + V+  +S G       YN L+  L++    +  E L
Sbjct: 718  LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 777

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              EM   G  P+  TY++L+ ++ +  + E+ + V      KG      +Y+ +IS   K
Sbjct: 778  FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 837

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
              RL+ AI+    ++S G  P    Y  +L    K G  + A  +F ++ + GC  N + 
Sbjct: 838  SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 897

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            YN + +    +G+  +   +  +M+ +GI PD  +Y  +I  LC+ G +++ +     + 
Sbjct: 898  YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 957

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                 P +I+YN++I G  K++R+ E++ +   M +KG  PN  TY  LI  +G  G  A
Sbjct: 958  EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1017

Query: 492  EAMELANALVS 502
            EA ++   L++
Sbjct: 1018 EAGKMYEELLT 1028



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 205/446 (45%), Gaps = 22/446 (4%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +V  + A+  G      +  A   L  ++  G   +  TYN ++  L   G    A +V+
Sbjct: 124 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 183

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------------GMC 205
             ++ D   P+V TY++L+ A       +  + LL EM                   G  
Sbjct: 184 RVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQA 243

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K+    +A++ +  +E+ GC+PDVI++ +L++ L + G+  + + +  +M     +P+ V
Sbjct: 244 KR--FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRV 301

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           TY  L+     +G ++  +++  A K  G   +  +Y  +I A C+ GR+  A+E  D M
Sbjct: 302 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 361

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G +P+  +YN++++ F K      ALE+F+ +   G  PN  ++    +    SG+ 
Sbjct: 362 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 421

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
           I+A+     M SKGI PD +  N+++  L + G +  A  +  ++++    P  I+Y ++
Sbjct: 422 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 481

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
           I    K  + +E++++   M E  C P+      LI+ +   G   EA  +   L  M+ 
Sbjct: 482 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 541

Query: 506 ISRD-TFKRLNRTFPLLDVYKEISHL 530
              D T+  L          KE+ HL
Sbjct: 542 EPTDGTYNTLLAGLGREGKVKEVMHL 567



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 22/373 (5%)

Query: 127 KVLDRLRSRGFSPDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + L+R RS    P V     + N M+  +   G +    +VFD + R   K  V T+  +
Sbjct: 72  EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 131

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
                +EG    A   L  M   + G+V  A+                +YN L+  L+  
Sbjct: 132 FGGLGVEGGLRSAPVALPVMK--EAGIVLNAY----------------TYNGLVYFLVKS 173

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
           G   E  ++   M+  G+ P+V TYS+L+ +  +    E  + +LR  +  G+ P+ YSY
Sbjct: 174 GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY 233

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
              I    +  R D A   L  M ++GC PD++ +  ++   C  G    A ++F K+  
Sbjct: 234 TICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKK 293

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P+  +Y T+      +GD    + + + M + G   + + Y ++I  LC+ G V E
Sbjct: 294 SDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFE 353

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ +  +M+     P   SYN +I GF K  R  +++E+   M   G KPN  T+VL I 
Sbjct: 354 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFIN 413

Query: 483 GIGYGGWRAEAME 495
             G  G   +A++
Sbjct: 414 YYGKSGESIKAIQ 426



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 35/301 (11%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S N +L  +   G+  +  ++   M  + ++ NV T++ +   L  +G    A   L   
Sbjct: 92  SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 151

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           KE G+  +AY+Y+ L+    K G    A+E    M+ DG +P +  Y+ ++ AF K  + 
Sbjct: 152 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 211

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           +  L +  ++   G  PNV SY      L  +     A  ++++M ++G +PD IT+  L
Sbjct: 212 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 271

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           I  LC  G + +A  +   M+ +  +P                                 
Sbjct: 272 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 331

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              V++Y  +I   C+  R+ E++E+   M +KG  P + +Y  LI G        +A+E
Sbjct: 332 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 391

Query: 496 L 496
           L
Sbjct: 392 L 392



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+  D  +V    + + +  +  ++  +      +G L  A   L  M   G + +   Y
Sbjct: 104 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 163

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++    K+G   +ALE++  +   G  P+V +Y+ +  A     D    L ++ EM +
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 223

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G++P+  +Y   I  L +    DEA  +L  ME+   +P VI++ ++I   C   RI++
Sbjct: 224 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 283

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRD 509
           + +V   M +   KP+  TY+ L++  G  G     ME+ NA+        V  +    D
Sbjct: 284 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 343

Query: 510 TFKRLNRTFPLLDVYKEISH 529
              ++ R F  L+++ E+  
Sbjct: 344 ALCQVGRVFEALEMFDEMKQ 363



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 18/277 (6%)

Query: 16   VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
            +R+    + +   H   ++     +  +I    ++ + ++++    ++++ G  P     
Sbjct: 804  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 863

Query: 76   TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
              L+    +  +   A  +   + +YG + +   YN L++G   A   E    +   +  
Sbjct: 864  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 923

Query: 135  RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            +G +PD+ +Y I+I +LC  G +      F QLL    +P +ITY +LI       + ++
Sbjct: 924  QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983

Query: 195  AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            A+ L +EM                  + K G   +A +    L ++G +P+V +YN L+R
Sbjct: 984  AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1043

Query: 238  TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                 G  +        MI  G  PN  TY  L + L
Sbjct: 1044 GYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           DG  E       AA++  +     S + ++      GR+    E  D M       ++  
Sbjct: 68  DGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGT 127

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  I       G    A      + + G   N  +YN +   L  SG    AL +   M+
Sbjct: 128 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 187

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P   TY+ L+    +   V+  + LL +ME+   +P V SY I I    + +R +
Sbjct: 188 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 247

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
           E+  +LA M  +GCKP+  T+ +LI+
Sbjct: 248 EAYRILAKMENEGCKPDVITHTVLIQ 273


>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 210/438 (47%), Gaps = 27/438 (6%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF----FQERK 87
            F      +  ++ +  R   F      +  M    CK    +   L+K F      E+ 
Sbjct: 121 GFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEKL 180

Query: 88  SNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL-DRLRSRGFSPDVVTYNI 146
            +    +  I+ +   P   A +  ++    +N+++LA K+L    R     P+V  +NI
Sbjct: 181 LHAYFSIQPIVREKPSPK--ALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNI 238

Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCK-PTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
           ++   C  G ++SAF++ +++       P ++TY+ L+                   G+C
Sbjct: 239 LVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMD------------------GLC 280

Query: 206 KKGMVGQAFQFVRSLESR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           + G V +AF     + SR    PD ++YN+L+      GK +    ++  M S G  PNV
Sbjct: 281 RNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNV 340

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
             YS L+  LC+ GK EDA  VL   K  GL PDA +Y  LI+  C++G+ D AIE L+ 
Sbjct: 341 YNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEE 400

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M  +GC  D V +N +L   C+ G  ++AL++ EKL   G   N  SY  + ++L    +
Sbjct: 401 MKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCE 460

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA  ++  ML +G +P   T N L+ CLC+ GMVD+A   L D+    F+P + ++ +
Sbjct: 461 LKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEV 520

Query: 445 IILGFCKTRRINESIEVL 462
           +I   C+ R++    E+L
Sbjct: 521 LIGLICRERKLLYVFELL 538



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 175/353 (49%), Gaps = 22/353 (6%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF  +  TY  ++  L       +  +V  Q+  + CK               EG     
Sbjct: 121 GFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCK-------------FHEGIFVNL 167

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           MK   +  + +K +   A+  ++ +      P  +S    L  LL+  + +   KL+   
Sbjct: 168 MKHFSKSSLHEKLL--HAYFSIQPIVREKPSPKALS--TCLNLLLDSNRVDLARKLLLHA 223

Query: 256 ISRGL--EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT-PDAYSYDPLISAYCKD 312
             R L  +PNV  ++IL+   C++G  + A +++   +    + P+  +Y  L+   C++
Sbjct: 224 -KRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRN 282

Query: 313 GRLDLAIEFLDYMIS-DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
           GR+  A +  + M+S D  +PD + YN ++  FC+ G  D+A  + + +   GC PNV +
Sbjct: 283 GRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYN 342

Query: 372 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
           Y+ +   L   G    A G+++E+   G++PD +TY SLI+ LCR+G  DEA+ LL +M+
Sbjct: 343 YSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMK 402

Query: 432 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               +   +++N+++ G C+  +  E+++++  + ++G   N+ +Y +++  +
Sbjct: 403 ENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSL 455



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 158/313 (50%), Gaps = 19/313 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS-PDVVTYNIMIGSLCSRGMIESAF 161
           +P+V  +N L+   CK   ++ A ++++ +R+  FS P++VTY+ ++  LC  G ++ AF
Sbjct: 230 KPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAF 289

Query: 162 KVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
            +F++++ RD+  P  +TY +LI      G+ D+A  ++  M                 G
Sbjct: 290 DLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDG 349

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +CK G +  A   +  ++  G +PD ++Y  L+  L   GK +E  +L+ EM   G + +
Sbjct: 350 LCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQAD 409

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
            VT+++L+  LCR+GK E+A+D++    ++G+  +  SY  ++++  +   L  A E L 
Sbjct: 410 SVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLG 469

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+  G  P     N +L   CK G  D A      L ++G  P + ++  +   +    
Sbjct: 470 LMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRER 529

Query: 384 DKIRALGMISEML 396
             +    ++ E++
Sbjct: 530 KLLYVFELLDELV 542



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 121/217 (55%), Gaps = 2/217 (0%)

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCLPDIVNYNTILAAF 344
           +L A ++    P+   ++ L+  +CK+G LD A E ++ M  S+   P++V Y+T++   
Sbjct: 220 LLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGL 279

Query: 345 CKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           C+NG   +A ++FE++ S     P+  +YN + +     G   RA  +I  M S G  P+
Sbjct: 280 CRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPN 339

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
              Y++L+  LC+ G +++A G+L +++ +  +P  ++Y  +I   C+  + +E+IE+L 
Sbjct: 340 VYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLE 399

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            M E GC+ +  T+ +L+ G+   G   EA+++   L
Sbjct: 400 EMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKL 436



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 36/168 (21%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R GK DE++  +E M  NGC+ D V    L+    +E K  +A+ ++E L 
Sbjct: 378 YTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLP 437

Query: 100 KYG------------------------------------EPDVFAYNALISGFCKANQIE 123
           + G                                    +P     N L+   CKA  ++
Sbjct: 438 QQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVD 497

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
            A   L  L   GF P + T+ ++IG +C    +   F++ D+L+  N
Sbjct: 498 DAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELVVTN 545


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 203/399 (50%), Gaps = 19/399 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           E ++   + LI+ FC   Q+  +  +L ++   G+ P+ +T+  ++  LC +G ++    
Sbjct: 42  EQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLH 101

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
             D+++    +   ++Y  L+      G+T  A+KLL  +                 G+C
Sbjct: 102 FHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLC 161

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K  +V +A+     +++R   P+VI+YN L+      G+      L+ EMI + + P+V 
Sbjct: 162 KDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY 221

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T+SILI +LC++GK  +A  +  A  + G+ P+ YSY+ +I+  CK  R+D A+  L  M
Sbjct: 222 TFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +    +PD V YN+++   CK+G    AL +  ++   G P +V +Y ++  AL  + + 
Sbjct: 280 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 339

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A  +  +M  +GI+P   TY +LI  LC+ G +  A  L   +        V +Y ++
Sbjct: 340 DKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVM 399

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           I G CK    +E++ + + M + GC PN  T+ ++I  +
Sbjct: 400 ISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 206/420 (49%), Gaps = 21/420 (5%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           G+   S   +  ++  G  P+ +  T L+K    + +  K +   + ++ +  + +  +Y
Sbjct: 59  GQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSY 118

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             L++G CK  +   A K+L  +  R   P+VV Y+ +I  LC   ++  A+ ++ ++  
Sbjct: 119 GTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P VITY  LI A  L GQ   A  LL EM +                  +   PDV
Sbjct: 179 REIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL------------------KNINPDV 220

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
            ++++L+  L   GK    +++   M+  G+ PNV +Y+I+I+ LC+  + ++A+++LR 
Sbjct: 221 YTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 278

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
              K + PD  +Y+ LI   CK GR+  A+  ++ M   G   D+V Y ++L A CKN N
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D+A  +F K+ + G  P + +Y  +   L   G    A  +   +L KG   D  TY  
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +IS LC++GM DEA+ +   ME     P  +++ III    +    +++ ++L  M  KG
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 207/421 (49%), Gaps = 20/421 (4%)

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +L ++  P +  +N ++    K         +  ++  +G   ++VT +I+I   C  G 
Sbjct: 2   LLVRHTSP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
           +  +F +  ++L+    P  IT+T L++   L+G+  K +   D++              
Sbjct: 61  MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGT 120

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK G    A + +R +E R  +P+V+ Y+ ++  L       E   L +EM +R 
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           + PNV+TY+ LI + C  G+   A  +L     K + PD Y++  LI A CK+G+   A 
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AK 238

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +    M+  G  P++ +YN ++   CK    D+A+ +  ++      P+  +YN++   L
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             SG    AL +++EM  +G   D +TY SL+  LC++  +D+A  L + M+    +PT+
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
            +Y  +I G CK  R+  + E+   +  KGC  +  TY ++I G+   G   EA+ + + 
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 418

Query: 500 L 500
           +
Sbjct: 419 M 419



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 193/386 (50%), Gaps = 16/386 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L +      +  L+K     G+  + L+F + +VA   + + V    L+    +  ++  
Sbjct: 74  LGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRC 133

Query: 91  AVRVMEILE-KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A++++ ++E +   P+V  Y+A+I G CK   +  A  +   + +R   P+V+TYN +I 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM-KLLDEMG----- 203
           + C  G +  AF +  +++  N  P V T++ILI A   EG+  K +   + +MG     
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNV 253

Query: 204 ---------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                    +CK   V +A   +R +  +   PD ++YN L+  L   G+      LM E
Sbjct: 254 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 313

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M  RG   +VVTY+ L+ +LC++   + A  +    KE+G+ P  Y+Y  LI   CK GR
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L  A E   +++  GC  D+  Y  +++  CK G  D+AL I  K+ D GC PN  ++  
Sbjct: 374 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 433

Query: 375 MFSALWSSGDKIRALGMISEMLSKGI 400
           +  +L+   +  +A  ++ EM++KG+
Sbjct: 434 IIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 21/283 (7%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           AG+   +   +  M+     PDV   + LI    +E K+ K  ++   + + G  P+V++
Sbjct: 198 AGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYS 255

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           YN +I+G CK  +++ A  +L  +  +   PD VTYN +I  LC  G I SA  + +++ 
Sbjct: 256 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 315

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
                  V+TYT L+ A                  +CK   + +A      ++ RG QP 
Sbjct: 316 HRGQPADVVTYTSLLDA------------------LCKNQNLDKATALFMKMKERGIQPT 357

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           + +Y  L+  L   G+ +  ++L   ++ +G   +V TY+++IS LC++G  ++A+ +  
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
             ++ G  P+A +++ +I +  +    D A + L  MI+ G L
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 157/283 (55%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
            S+ S GC PD+ +YN L+  L   G      +LM EM  +G EPNV+TY+ILI   C++
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G+ E+A +VL     KGL  +A  Y+ LISA CKD ++  A+     M S GC PDI  +
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N+++   CK    ++AL +++ +   G   N  +YNT+  A    G    AL ++++ML 
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +G   D+ITYN LI  LCR G +++ + L  DM S    P  IS NI+I G C+T  I  
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++E L  M  +G  P+  TY  LI G+   G   EA+ L + L
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 180/339 (53%), Gaps = 17/339 (5%)

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
           + + S G  PD+ TYN +I  LC +G + SA ++ +++    C+P VITYTILI     E
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G+ ++A  +LDEM                  +CK   V  A      + S+GC+PD+ ++
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+  L  + K+EE   L  +M+  G+  N +TY+ LI +  R G  ++A+ ++     
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G   D  +Y+ LI A C+ G ++  +   + M+S G  P+ ++ N ++   C+ GN   
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           ALE    +   G  P++ +YN++ + L  +G    AL +  ++  +GI PD ITYN+LIS
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             C++GM D+A  LL     + F P  +++ I++  F K
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 172/319 (53%), Gaps = 18/319 (5%)

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           + + +L   C P + TY  LI                  +G+CKKG +  A + +  ++ 
Sbjct: 1   MHESMLSVGCGPDIFTYNTLI------------------LGLCKKGYLVSARELMNEMQI 42

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +GC+P+VI+Y +L+      G+ EE   ++ EM  +GL  N V Y+ LIS+LC+D K +D
Sbjct: 43  KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 102

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+++      KG  PD ++++ LI   CK  + + A+     M+ +G + + + YNT++ 
Sbjct: 103 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 162

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           AF + G   +AL++   +   GCP +  +YN +  AL  +G+  + L +  +M+SKG+ P
Sbjct: 163 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 222

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           + I+ N LI+ LCR G +  A+  L DM      P +++YN +I G CKT R  E++ + 
Sbjct: 223 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282

Query: 463 AAMFEKGCKPNETTYVLLI 481
             +  +G  P+  TY  LI
Sbjct: 283 DKLQVEGICPDAITYNTLI 301



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 178/359 (49%), Gaps = 19/359 (5%)

Query: 61  ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKA 119
           ESM++ GC PD+     LI    ++     A  +M  ++  G EP+V  Y  LI  FCK 
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 120 NQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITY 179
            ++E A  VLD +  +G + + V YN +I +LC    ++ A  +F  +    CKP + T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 180 TILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
             LI                   G+CK     +A    + +   G   + I+YN L+   
Sbjct: 123 NSLI------------------FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 164

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
           L  G  +E  KL+ +M+ RG   + +TY+ LI +LCR G  E  + +      KGL P+ 
Sbjct: 165 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 224

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            S + LI+  C+ G +  A+EFL  MI  G  PDIV YN+++   CK G A +AL +F+K
Sbjct: 225 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 284

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           L   G  P+  +YNT+ S     G    A  ++S  +  G  P+E+T+  L+S   ++G
Sbjct: 285 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 18/311 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
            +  M   GC+P+V+  T LI +F +E +  +A  V++ +   G   +   YN LIS  C
Sbjct: 36  LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 95

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  +++ A  +   + S+G  PD+ T+N +I  LC     E A  ++  +L +      I
Sbjct: 96  KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 155

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY  LI A +  G   +A+KL+++M                  +C+ G + +       +
Sbjct: 156 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 215

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            S+G  P+ IS N+L+  L   G  +   + + +MI RGL P++VTY+ LI+ LC+ G+ 
Sbjct: 216 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 275

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           ++A+++    + +G+ PDA +Y+ LIS +CK+G  D A   L   +  G +P+ V +  +
Sbjct: 276 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 335

Query: 341 LAAFCKNGNAD 351
           ++ F K G+ +
Sbjct: 336 VSNFIKEGDQE 346



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 127/248 (51%)

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+S G  P++ TY+ LI  LC+ G    A +++   + KG  P+  +Y  LI  +CK+GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           L+ A   LD M   G   + V YN +++A CK+     AL +F  +S  GC P++ ++N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L        ALG+  +ML +G+  + ITYN+LI    R G + EA+ L+ DM    
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
                I+YN +I   C+   I + + +   M  KG  PN  +  +LI G+   G    A+
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 495 ELANALVS 502
           E    ++ 
Sbjct: 245 EFLRDMIH 252



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 51/279 (18%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNA 111
           K  ++L     M + GCKP                                  D+F +N+
Sbjct: 99  KVQDALNMFGDMSSKGCKP----------------------------------DIFTFNS 124

Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
           LI G CK N+ E A  +   +   G   + +TYN +I +   RG ++ A K+ + +L   
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
           C    ITY  LI+A    G  +K + L ++M                 G+C+ G +  A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           +F+R +  RG  PD+++YN L+  L   G+ +E   L  ++   G+ P+ +TY+ LIS  
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           C++G  +DA  +L    + G  P+  ++  L+S + K+G
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 1/161 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    R G   E+L  +  M+  GC  D +    LIK   +     K + + E ++
Sbjct: 157 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 216

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+  + N LI+G C+   I+ A + L  +  RG +PD+VTYN +I  LC  G  +
Sbjct: 217 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 276

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
            A  +FD+L  +   P  ITY  LI     EG  D A  LL
Sbjct: 277 EALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 317



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 1/160 (0%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           + +  +  LIK   RAG  ++ L   E M++ G  P+ + C  LI    +      A+  
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246

Query: 95  M-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           + +++ +   PD+  YN+LI+G CK  + + A  + D+L+  G  PD +TYN +I   C 
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
            GM + A  +  + +     P  +T+ IL+   + EG  +
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 49/94 (52%)

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           M   MLS G  PD  TYN+LI  LC+ G +  A  L+ +M+     P VI+Y I+I  FC
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           K  R+ E+  VL  M  KG   N   Y  LI  +
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 94


>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
 gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 220/478 (46%), Gaps = 46/478 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + GK ++++  I  M A G +P     T L+  F ++ + + A+ + + +  YG   D+ 
Sbjct: 254 KWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLA 313

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y+ LI G C  N++  A K+ + ++    +PDV     MI + C +G     F      
Sbjct: 314 MYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQG----DFSTVGPF 369

Query: 168 LRDNC---KP--TVITYTILIQATMLEGQTDKAMKLLDEM-------------------- 202
           + +N    KP   V+ Y ++++     G+ + A +LL  M                    
Sbjct: 370 INENAVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVI 429

Query: 203 ----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE 246
                           G+CK   +  A    + +   GC+  ++ +N L+  L N  + +
Sbjct: 430 SEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLD 489

Query: 247 EGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           E  ++  +M    L+P+  TY+ L   +CR   T  A D+LR  +     P   +   ++
Sbjct: 490 EAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMV 549

Query: 307 SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCP 366
              C  GR+  A++FLD M+  G LPDIV Y+  +   CK G  + AL +F  +S     
Sbjct: 550 QQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYL 609

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+V ++N + +    +G    A  ++ EMLSKG+ P  +TYN +I   C+ G +D+A+  
Sbjct: 610 PDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISC 669

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           +  M      PTV++Y  ++ G C   R +E+I +   M EKGC PNE  Y   I G+
Sbjct: 670 VYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGL 727



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 184/366 (50%), Gaps = 18/366 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P+  ++N ++ G CK  +++LA  +   +   G    ++ +N +I  LC+   ++ A++
Sbjct: 434 KPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYE 493

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F+Q+   + KP+  TY  L                    G+C++     A   +R + +
Sbjct: 494 IFNQMKDLDLKPSEFTYNSLF------------------YGICRRKDTSAAADLLREMRT 535

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
              +P + +   +++ L   G+  E  + + EM+  G  P++VTYS  ++ +C+ G+TE+
Sbjct: 536 SSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETEN 595

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+ + R    K   PD  +++ LI+ + K G+ D A E ++ M+S G  P +V YN ++ 
Sbjct: 596 ALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMID 655

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +CK+G  D+A+    K+ D   PP V +Y ++   L ++G    A+ +  +M  KG  P
Sbjct: 656 IWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSP 715

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +EI Y + I+ LC+ G  + AV    +M++  F   + S   +        + ++  E+L
Sbjct: 716 NEIAYTAFINGLCKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELL 775

Query: 463 AAMFEK 468
             + +K
Sbjct: 776 KVVLQK 781



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 162/350 (46%), Gaps = 19/350 (5%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           K D +L   + MV  GCK  ++M   LI +     + ++A  +   ++    +P  F YN
Sbjct: 452 KLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYN 511

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           +L  G C+      A  +L  +R+    P +     M+  LC  G I  A +  D++L+ 
Sbjct: 512 SLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKL 571

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
              P ++TY+  +                   GMCK G    A    R + S+   PDV+
Sbjct: 572 GFLPDIVTYSAAMN------------------GMCKIGETENALGLFRDISSKCYLPDVV 613

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           ++N+L+      GK++E +++M EM+S+GL P+VVTY+++I   C+ GK + A+  +   
Sbjct: 614 AHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKM 673

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            ++   P   +Y  L+   C  GR D AI     M   GC P+ + Y   +   CK G  
Sbjct: 674 IDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGRT 733

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           + A+  +E++       ++ S   + ++L + G   +   ++  +L K +
Sbjct: 734 ETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVVLQKDV 783



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 179/437 (40%), Gaps = 80/437 (18%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           ++ NA+ S      +  L     + L SR   +P  + +  ++  L + G+ ++A +VFD
Sbjct: 102 YSLNAMASLLPPHQRAHLDRLATEALASRCAMTPGALGF--LLRRLGAAGLPDTAARVFD 159

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-GMCKKGMVGQAFQFVRSLESR 223
                 +C P   TY  L+ A    G+ + A   L EM   C +  V             
Sbjct: 160 AARTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESV------------- 206

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSILISSLCRDGKTED 282
               D  +   LL    N G+ E+   ++  M  R  ++ +V+T  +L  +  + GK ED
Sbjct: 207 ----DRYTLTSLLNCYCNAGRPEDASAVLQRMSERAWVDEHVLT--MLAVAFSKWGKVED 260

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           AV+++   +  G+ P   +   L+  + + GR+D+A++  D M S G   D+  Y+ ++ 
Sbjct: 261 AVELIGRMEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIE 320

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVS-------------------------------- 370
             C      +A++++E +      P+V                                 
Sbjct: 321 GLCDGNEMGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINENAVHLKPG 380

Query: 371 ----SYNTMFSALWSSGDKIRALGMISEMLSKG-------------------IEPDEITY 407
                YN +   L + G+   A  ++S M+  G                   ++P+  ++
Sbjct: 381 SAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSF 440

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N ++  LC+   +D A+ L  DM     +  ++ +N +IL  C + R++E+ E+   M +
Sbjct: 441 NIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKD 500

Query: 468 KGCKPNETTYVLLIEGI 484
              KP+E TY  L  GI
Sbjct: 501 LDLKPSEFTYNSLFYGI 517


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 224/460 (48%), Gaps = 22/460 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K  F A    E++   ++MV +G  P V   + L+  F ++R  +  + ++  +E  G
Sbjct: 188 LVKSGFDA----EAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARG 243

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V++Y   I    +A + + A ++L ++   G  PDVVT+ ++I  LC  G +  A 
Sbjct: 244 VKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAK 303

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            VF ++   + KP  +TY  L+      G +   M++ + M                  +
Sbjct: 304 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDAL 363

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G + +A      ++ +G  P+  SYN L+   L    ++   +L   M + G  PN 
Sbjct: 364 CQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 423

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T+ + I+   + G++  A+      K KG+ PD  + + ++S+  + GRL +A      
Sbjct: 424 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYE 483

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           +   G  PD + Y  ++    K   AD+A+  F  + + GC P+V + N++   L+  G 
Sbjct: 484 LKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGK 543

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  ++    IEP   TYN+L+S L R+G V E + LL +M  +   P +I+YN 
Sbjct: 544 GNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNT 603

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++    K   +N +I +L +M EKGC P+ ++Y  ++ G+
Sbjct: 604 VLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGL 643



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 218/460 (47%), Gaps = 19/460 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D  L+ +  M A G KP+V   T  I+   Q  + ++A +++  +E  G +PDV  +  +
Sbjct: 230 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVV 289

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I   C A ++  A  V  ++++    PD VTY  ++      G  +S  ++++ ++ D  
Sbjct: 290 IQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGY 349

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
              +++YT ++ A    G+ D+A+ + DEM                 G  K  M  +A +
Sbjct: 350 NDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALE 409

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               + + G  P+  ++ + +      G+  +  +    M S+G+ P+V   + ++SSL 
Sbjct: 410 LFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLA 469

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G+   A  V    K+ G++PD  +Y  +I    K  + D A+ F   M+  GC+PD++
Sbjct: 470 RSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVL 529

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             N+++    K G  ++A ++F +L ++   P   +YNT+ S L   G     + ++ EM
Sbjct: 530 ALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEM 589

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
                 P+ ITYN+++ CL ++G V+ A+G+L  M      P + SYN ++ G  K  R 
Sbjct: 590 THSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERF 649

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            E+  +   M +K   P+  T   ++      G   EA+ 
Sbjct: 650 EEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALH 688



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 209/459 (45%), Gaps = 36/459 (7%)

Query: 34   DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
            +  ++ F  L++        ++S+ F E++ + G   +      LI+   + +K+ +A +
Sbjct: 700  NTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ 759

Query: 94   VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
            +    +  G      +YN+LI G    N I++A  +   ++  G  PD  TYN+++ ++ 
Sbjct: 760  LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 819

Query: 153  SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ 212
                IE   +V  ++ R   + T +TY  +I                   G+ K   + Q
Sbjct: 820  KSMRIEEMLRVQAEMHRKGYESTYVTYNTIIS------------------GLVKSKRLEQ 861

Query: 213  AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
            A     +L S G  P   +Y  LL  LL  GK  + E L  EM+  G +PN   Y+IL++
Sbjct: 862  AIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLN 921

Query: 273  SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
                 G TE+   +     E+G+ PD  SY  LI   C  GRL+  + +   ++  G  P
Sbjct: 922  GHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEP 981

Query: 333  DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
            D++ YN ++    K+   ++A+ +F ++   G  PN+ +YN++   L  +G    A  M 
Sbjct: 982  DLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMY 1041

Query: 393  SEMLSKGIEPDEITYNSLISCLCRDGMVDEA------VGLLVDMESTRFRPTVISYNIII 446
             E+L KG +P+  TYN+LI      G  D A      V + V +++            +I
Sbjct: 1042 EELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTA-----------LI 1090

Query: 447  LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
             G      IN +  + A M  +GC P++ TY L+++ IG
Sbjct: 1091 SGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIG 1129



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 252/560 (45%), Gaps = 78/560 (13%)

Query: 11  KSNERVRVSSSAE-TRPNTHLLSFDVKETQFMKLIKRSFR---AGKFDESL-YFIESMVA 65
           + +ER R + +   T    H+L       + ++L   + R   A    ES  Y +E M A
Sbjct: 61  RVHERRRAAGAGTGTESVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRA 120

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELA 125
           +G   D+     L++K  Q  K+N                V  +  + SG      +  A
Sbjct: 121 HGRVGDMAQVFDLMQK--QIVKAN----------------VGTFATVFSGVGVQGGLRSA 162

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              L  +R  G S +  TYN +I  L   G    A +V+  ++ D   P+V TY++L+ +
Sbjct: 163 PVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVS 222

Query: 186 TMLEGQTDKAMKLLDEM------------GMCKKGMVGQA------FQFVRSLESRGCQP 227
              +   D  + LL+EM             +C + ++GQA      +Q +  +E  GC+P
Sbjct: 223 FGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR-VLGQAARFDEAYQILGKMEDSGCKP 281

Query: 228 DVISYNMLLRTLLNMGKWEEGE-----------------------------------KLM 252
           DV+++ ++++ L + G+  + +                                   ++ 
Sbjct: 282 DVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIW 341

Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
             M++ G   N+V+Y+ ++ +LC+ G+ ++A+ V    KEKG++P+ YSY+ LIS + K 
Sbjct: 342 NAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKA 401

Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
              D A+E  ++M + G  P+   +   +  + K+G + +A++ +E +   G  P+V++ 
Sbjct: 402 DMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAA 461

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           N + S+L  SG    A  +  E+   G+ PD ITY  +I C  +    DEA+    DM  
Sbjct: 462 NAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVE 521

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
           T   P V++ N +I    K  + NE+ ++   + E   +P   TY  L+ G+G  G   E
Sbjct: 522 TGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKE 581

Query: 493 AMELANALV-SMHAISRDTF 511
            M L   +  S+H  +  T+
Sbjct: 582 VMHLLEEMTHSIHPPNLITY 601



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 232/550 (42%), Gaps = 88/550 (16%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  +IK   +A K DE++ F   MV  GC PDV+    LI   ++  K N+A ++   L+
Sbjct: 496  YTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLK 555

Query: 100  KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL------- 151
            +   EP    YN L+SG  +  +++    +L+ +      P+++TYN ++  L       
Sbjct: 556  EMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVN 615

Query: 152  CSRGMI----------------------------ESAFKVFDQL---------------- 167
            C+ GM+                            E AF++F Q+                
Sbjct: 616  CAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILP 675

Query: 168  -------------------LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----- 203
                               L+ +C     ++  L++  + +   +K+++  + +      
Sbjct: 676  SFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGIL 735

Query: 204  ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                        +CK     +A Q     +  G      SYN L+R L++    +  E L
Sbjct: 736  LNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDL 795

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             TEM   G  P+  TY++++ ++ +  + E+ + V      KG      +Y+ +IS   K
Sbjct: 796  FTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVK 855

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
              RL+ AI+    ++S+G  P    Y  +L    K G    A  +F ++ + GC PN + 
Sbjct: 856  SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTI 915

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            YN + +    +G+      +  +M+ +GI PD  +Y  LI  LC  G +++ +     + 
Sbjct: 916  YNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLL 975

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                 P +I YN++I G  K+ RI E++ +   M +KG  PN  TY  LI  +G  G  +
Sbjct: 976  ELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKAS 1035

Query: 492  EAMELANALV 501
            EA ++   L+
Sbjct: 1036 EAAQMYEELL 1045



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 222/494 (44%), Gaps = 55/494 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
            R GK  E ++ +E M  +   P+++    ++    +  + N A+ ++  + EK   PD+ 
Sbjct: 575  REGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLS 634

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK-VFDQ 166
            +YN ++ G  K  + E A ++  +++ +  +PD  T   ++ S    G+++ A   V + 
Sbjct: 635  SYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKEY 693

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGM 209
            +L+ +C     ++  L++  + +   +K+++  + +                  +CK   
Sbjct: 694  ILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKK 753

Query: 210  VGQAFQF-------------------VRSL----------------ESRGCQPDVISYNM 234
              +A Q                    +R L                +  GC PD  +YN+
Sbjct: 754  ALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNL 813

Query: 235  LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            +L  +    + EE  ++  EM  +G E   VTY+ +IS L +  + E A+D+      +G
Sbjct: 814  ILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 873

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             +P   +Y PL+    K G++  A    + M+  GC P+   YN +L      GN +   
Sbjct: 874  FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVC 933

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +IFEK+ + G  P++ SY  +   L ++G     L    ++L  G+EPD I YN LI  L
Sbjct: 934  QIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993

Query: 415  CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +   ++EAV L  +M+     P + +YN +IL   K  + +E+ ++   +  KG KPN 
Sbjct: 994  GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNV 1053

Query: 475  TTYVLLIEGIGYGG 488
             TY  LI G    G
Sbjct: 1054 FTYNALIRGYSVSG 1067



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 217/504 (43%), Gaps = 56/504 (11%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           ++  +  LI    +A  FD +L     M A G  P+       I  + +  +S KA++  
Sbjct: 387 EQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRY 446

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E ++  G  PDV A NA++S   ++ ++ +A +V   L+  G SPD +TY +MI      
Sbjct: 447 EHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKA 506

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A   F  ++   C P V+    LI      G+ ++A KL  +             
Sbjct: 507 SKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQ------------- 553

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                L+    +P   +YN LL  L   GK +E   L+ EM      PN++TY+ ++  L
Sbjct: 554 -----LKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCL 608

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            ++G+   A+ +L +  EKG TPD  SY+ ++    K+ R + A      M      PD 
Sbjct: 609 SKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDY 667

Query: 335 VNYNTILAAFCKNGNADQALE-IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
               TIL +F KNG   +AL  + E +    C  + SS++++   + +     +++    
Sbjct: 668 ATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAE 727

Query: 394 EMLSKGI---------------------EPDEI--------------TYNSLISCLCRDG 418
            + S+GI                     E  ++              +YNSLI  L  + 
Sbjct: 728 NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 787

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           ++D A  L  +M+     P   +YN+I+    K+ RI E + V A M  KG +    TY 
Sbjct: 788 LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYN 847

Query: 479 LLIEGIGYGGWRAEAMELANALVS 502
            +I G+       +A++L   L+S
Sbjct: 848 TIISGLVKSKRLEQAIDLYYNLMS 871



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 145/344 (42%), Gaps = 48/344 (13%)

Query: 67   GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELA 125
            GC PD      ++    +  +  + +RV   + + G E     YN +ISG  K+ ++E A
Sbjct: 803  GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 126  NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
              +   L S GFSP   TY  ++  L   G +  A  +F+++L   CKP    Y IL+  
Sbjct: 863  IDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922

Query: 186  TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
              + G T+   ++ ++M                  +C  G +     + R L   G +PD
Sbjct: 923  HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982

Query: 229  VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            +I YN+L+  L    + EE   L  EM  +G+ PN+ TY+ LI  L + GK  +A  +  
Sbjct: 983  LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042

Query: 289  AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD------------------------- 323
                KG  P+ ++Y+ LI  Y   G  D A    D                         
Sbjct: 1043 ELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIA 1102

Query: 324  -----YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
                  M   GC PD   YN IL A  K+   ++ L++ E++++
Sbjct: 1103 EGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 144/332 (43%), Gaps = 49/332 (14%)

Query: 16   VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
            +R+      +   H   ++     +  +I    ++ + ++++    ++++ G  P     
Sbjct: 822  MRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTY 881

Query: 76   TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
              L+    +  K   A  +   + +YG +P+   YN L++G   A   E   ++ +++  
Sbjct: 882  GPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVE 941

Query: 135  RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            +G +PD+ +Y ++I +LC+ G +      F QLL    +P +I Y +LI       + ++
Sbjct: 942  QGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEE 1001

Query: 195  AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
            A+ L +EM   KKG+V                P++ +YN L+  L   GK  E  ++  E
Sbjct: 1002 AVCLFNEMK--KKGIV----------------PNLYTYNSLILHLGKAGKASEAAQMYEE 1043

Query: 255  MISRGLEPNVVTYSILISSLCRDGKTEDA---------------------VD-------- 285
            ++ +G +PNV TY+ LI      G T++A                     VD        
Sbjct: 1044 LLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAE 1103

Query: 286  -VLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             +    K +G  PD ++Y+ ++ A  K  R++
Sbjct: 1104 GLFAEMKRRGCGPDQFTYNLILDAIGKSMRIE 1135



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            +  LI    +AGK  E+    E ++  G KP+V     LI+ +     ++ A    + + 
Sbjct: 1021 YNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVA 1080

Query: 100  KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                  V    ALISG    N I +A  +   ++ RG  PD  TYN+++ ++     IE 
Sbjct: 1081 V----GVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEE 1136

Query: 160  AFKVFDQLLRD 170
              KV +++  D
Sbjct: 1137 MLKVQEEIAED 1147


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 208/473 (43%), Gaps = 53/473 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LIK     G  DE+      M+  G  P       +IK   + ++   A+ + +++ 
Sbjct: 332 YTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVV 391

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
             G PDVF Y  LI    K +++  A  + D+++  G  P +VT + ++   C +G ++ 
Sbjct: 392 DTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDE 451

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A K++ ++      P  +TYT L++  + +   DKA  LL+EM                 
Sbjct: 452 ALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEM----------------- 494

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
               G      +YN+L+  L  + +  E ++++   +S G  P  +TY+ +I+   + G 
Sbjct: 495 -HQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGM 553

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
              A+ + R   EKG+TP+  +Y   I  YC+    DLA++ L YM  +G  PDI  YN 
Sbjct: 554 MGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNA 613

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN-------------------------- 373
            +  FCK GN   AL     L   G  PNV+ YN                          
Sbjct: 614 FINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQR 673

Query: 374 ---------TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
                    T+       G+   AL + SEML+    PD+ T+ +L   LCR G +D A 
Sbjct: 674 IAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAK 733

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
            LL DM      P  ++YN++I    +  ++ E+ ++   M   G  P++TTY
Sbjct: 734 RLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 233/538 (43%), Gaps = 67/538 (12%)

Query: 37  ETQFMKLIKRSFRAGKFD-ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           + +   ++ R+   G+   +++   + M   G KPD  +    I    + R +++AV+V+
Sbjct: 187 DAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVL 246

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDR-LRSRGFSPDVVTYNIMIGSLCS 153
             + + G +P  F YN+++    K  +++ A ++ D+ L + G   DV     ++   C 
Sbjct: 247 GKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCL 306

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
            G I  A  +FD+ +RD   PT +TYT+LI+    EG TD+  KL               
Sbjct: 307 HGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKL--------------- 351

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
               R +  +G  P    +N++++ LL   +WE+   L   ++  G+ P+V TY  LI  
Sbjct: 352 ---CRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHW 407

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
           L +  K  +AV++    KE G+ P   +   L+  YC+ G +D A++    M   G  P+
Sbjct: 408 LSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPN 467

Query: 334 IVNYNTILAAFCKNGNADQAL-----------------------------------EIFE 358
            V Y T++  + K    D+A                                    E+ +
Sbjct: 468 EVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLK 527

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +    G  P   +YN++ +    +G    AL M  +M  KGI P+ +TY S I   CR  
Sbjct: 528 RFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTN 587

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
             D AV LL+ M      P + +YN  I  FCK   ++ ++  L  + + G  PN T Y 
Sbjct: 588 CCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYN 647

Query: 479 LLIEGIGYGGWRAEAMELANALVSMHAISRDT---------FKRLNRTFPLLDVYKEI 527
             + G       AEA +   +++    I+ DT         F ++      L++Y E+
Sbjct: 648 SFVTGYKNLKMMAEASKFYYSMIKQR-IAADTEIYTTLIDGFSKVGNVAFALELYSEM 704



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 189/433 (43%), Gaps = 54/433 (12%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  +   L+    +      A  + D +R +G+  D   Y++++ +     M   A ++
Sbjct: 151 PDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRL 210

Query: 164 FDQL---------------------LRD--------------NCKPTVITYTILIQATML 188
           FD++                     LRD                KP   TY  ++   + 
Sbjct: 211 FDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVK 270

Query: 189 EGQTDKAMKLLDEM------------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
            G+ D+A++L D+M                  G C  G +G+A          G  P  +
Sbjct: 271 VGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNV 330

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           +Y +L++     G  +E  KL  +MI +GL P+   ++++I  L R+ + EDA+ +    
Sbjct: 331 TYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLV 390

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            + G+ PD ++Y  LI    K  ++  A+   D M   G  P IV  +++L  +C+ G  
Sbjct: 391 VDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCM 449

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D+AL+++ ++   G PPN  +Y T+           +A  +++EM   G+   E TYN L
Sbjct: 450 DEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNIL 509

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I+ LC    V E   +L    S  F PT ++YN II GF K   +  ++ +   M EKG 
Sbjct: 510 INGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGI 569

Query: 471 KPNETTYVLLIEG 483
            PN  TY   I+G
Sbjct: 570 TPNIVTYTSFIDG 582



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 164/377 (43%), Gaps = 58/377 (15%)

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           + +++     P   + T L+ AT        A+ L DEM                    +
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEM------------------RCK 182

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G   D   Y++++R  +      +  +L  EM   G++P+   Y+I I+ LC+    + A
Sbjct: 183 GYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRA 242

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDGCLPDIVNYNTILA 342
           V VL   +E GL P  ++Y+ ++    K GR+D A+   D M ++ G   D+    T++ 
Sbjct: 243 VQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQ 302

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI-- 400
            +C +G   +AL++F++    G  P   +Y  +     + G       +  +M+ +G+  
Sbjct: 303 GYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLP 362

Query: 401 --------------------------------EPDEITYNSLISCLCRDGMVDEAVGLLV 428
                                            PD  TY  LI  L +   V EAV L  
Sbjct: 363 STYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWD 422

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            M+    +P++++ + ++LG+C+   ++E++++ + M  KG  PNE TY  L++G     
Sbjct: 423 KMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGY---- 478

Query: 489 WRAEAMELANALVS-MH 504
            + +A + A AL++ MH
Sbjct: 479 IKKKAFDKAYALLNEMH 495



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 19/265 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I    +AG    +L     M   G  P++V  T  I  + +    + AV+++  + 
Sbjct: 541 YNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMR 600

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  PD+ AYNA I+ FCK   +  A   L  L   G +P+V  YN  +    +  M+ 
Sbjct: 601 CNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMA 660

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K +  +++         YT LI                   G  K G V  A +   
Sbjct: 661 EASKFYYSMIKQRIAADTEIYTTLID------------------GFSKVGNVAFALELYS 702

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            + +    PD  ++  L   L   G  +  ++L+ +M    + PN VTY++LI++  RDG
Sbjct: 703 EMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDG 762

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYD 303
           K ++A  +       G+ PD  +Y+
Sbjct: 763 KLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 65/155 (41%)

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
           + ++   G  P+  S   +  A         AL +  EM  KG   D   Y+ ++     
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
             M  +AV L  +M     +P    Y I I G CK R  + +++VL  M E G KP + T
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 477 YVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           Y  +++ +   G   EA+ L + ++       D F
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVF 295


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 217/427 (50%), Gaps = 18/427 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+    A + D +L  +  M  +G  P+V++ + L++ + +  +     +V E + + G
Sbjct: 156 LIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLG 215

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EPDV  +   I   CK  +I  A KV D +  RG  P+VVTYN++I  LC  G +  A 
Sbjct: 216 VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREAL 275

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            + +++      P V+TY  LI       + D AM LL+EM      + G          
Sbjct: 276 ALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM------IQGDTL------- 322

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
               +PDV+++N ++  L  +G+  +   +   M  RG   N+VTY+ LI    R  K  
Sbjct: 323 ---VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVN 379

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A++++      GL PD+++Y  LI+ + K   +D A  FL  M   G   ++ +Y  +L
Sbjct: 380 MAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLL 439

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
           AA C+ G  +QA+ +F ++ D+ C  +  +Y+TM      SGD   A  ++ +ML +G+ 
Sbjct: 440 AALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLA 498

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
           PD +TY+ LI+   + G ++EA  +L  M ++ F P V  ++ +I G+    +IN+ +++
Sbjct: 499 PDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDL 558

Query: 462 LAAMFEK 468
           +  M  K
Sbjct: 559 IHEMRAK 565



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 185/350 (52%), Gaps = 24/350 (6%)

Query: 140 DVVTYNIMIGSLCSRGM-IESAFKVFDQLLRDN---CKPTVITYTILIQATMLEGQTDKA 195
           D V+YNI++ +LC RG  +  A  +   + R+     +P  ++YT++++      +TD+A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
           + LL                  RS+++ G + DV++Y  L+R L +  + +   +L+ EM
Sbjct: 135 VALL------------------RSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM 176

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              G+ PNV+ YS L+   CR G+ +D   V       G+ PD   +   I   CK GR+
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRI 236

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A++  D M+  G  P++V YN ++   CK G+  +AL +  ++ D G  P+V +YNT+
Sbjct: 237 GKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTL 296

Query: 376 FSALWSSGDKIRALGMISEMLSKG--IEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            + L    +   A+G++ EM+     +EPD +T+NS+I  LC+ G + +A+ +   M   
Sbjct: 297 IAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAER 356

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
                +++YN +I GF +  ++N ++ +++ +   G +P+  TY +LI G
Sbjct: 357 GCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILING 406



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 242/506 (47%), Gaps = 37/506 (7%)

Query: 24  TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
            RPN       V  T  M+ +  S R    DE++  + SM A+G + DVV    LI+   
Sbjct: 111 ARPNA------VSYTMVMRGLCASRRT---DEAVALLRSMQASGVRADVVTYGTLIRGLC 161

Query: 84  QERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
              + + A+ ++ E+      P+V  Y+ L+ G+C++ + +  +KV + +   G  PDV+
Sbjct: 162 DAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVI 221

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            +   I  LC +G I  A KV D +++   +P V+TY +LI                   
Sbjct: 222 MFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINC----------------- 264

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG--L 260
            +CK+G V +A      ++ +G  PDV++YN L+  L  + + +    L+ EMI     +
Sbjct: 265 -LCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLV 323

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           EP+VVT++ +I  LC+ G+   A+ V     E+G   +  +Y+ LI  + +  ++++A+ 
Sbjct: 324 EPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMN 383

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            +  +IS G  PD   Y+ ++  F K    D+A      ++  G    +  Y  + +AL 
Sbjct: 384 LMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALC 443

Query: 381 SSGDKIRALGMISEM-LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
             G   +A+ + +EM ++ G+  D + Y++++   C+ G +  A  LL DM      P  
Sbjct: 444 QLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           ++Y+I+I  F K   + E+  VL  M   G  P+   +  LI+G    G   + ++L + 
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561

Query: 500 L----VSMHAISRDTFKRLNRTFPLL 521
           +    V++      T  RL +  PLL
Sbjct: 562 MRAKNVAIDPKFICTLVRLPQQMPLL 587



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 156/326 (47%), Gaps = 44/326 (13%)

Query: 228 DVISYNMLLRTLLNMG-KWEEGEKLMTEMISR----GLEPNVVTYSILISSLCRDGKTED 282
           D +SYN++L  L   G    +   L+ +M SR       PN V+Y++++  LC   +T++
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADM-SREAHPAARPNAVSYTMVMRGLCASRRTDE 133

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           AV +LR+ +  G+  D  +Y  LI   C    LD A+E L  M   G  P+++ Y+ +L 
Sbjct: 134 AVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLR 193

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +C++G      ++FE++S +G  P+V  +      L   G   +A+ +   M+ +G+EP
Sbjct: 194 GYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEP 253

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDME------------------------------- 431
           + +TYN LI+CLC++G V EA+ L  +M+                               
Sbjct: 254 NVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLL 313

Query: 432 ------STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
                  T   P V+++N +I G CK  R+ ++I V   M E+GC  N  TY  LI G  
Sbjct: 314 EEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFL 373

Query: 486 YGGWRAEAMELANALVSMHAISRDTF 511
                  AM L + L+S   +  D+F
Sbjct: 374 RVHKVNMAMNLMSELIS-SGLEPDSF 398


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 22/423 (5%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCK 118
            ++ M   GC PD V    ++    +  + ++A  V+  +     P   +YNA++   C+
Sbjct: 158 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP----PVAASYNAIVLALCR 213

Query: 119 ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVIT 178
             +++    V+  +  RG  P+V+TY  ++ + C  G +  A  +  +++   C P V+T
Sbjct: 214 EFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 273

Query: 179 YTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
           +T L++                  G+   G V  A    R + + G  P  +SYN+L+R 
Sbjct: 274 FTALVR------------------GLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 315

Query: 239 LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
           L ++G  +    ++  M   G  PNV TYS LI    + G    A+ +       G  P+
Sbjct: 316 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 375

Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
              Y  ++  +CK    + A   +D M+ + C P+ V +NT++ + C      +AL +F 
Sbjct: 376 VVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH 435

Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           ++   GC PN  +YN +   L+  G+   AL M++EM S GIE   +TYN+++S LC+  
Sbjct: 436 EMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTR 495

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
           M  EA+  +  M     +P   +++ II  +CK   +  +  +L AM    C  N   Y 
Sbjct: 496 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYT 555

Query: 479 LLI 481
           +L+
Sbjct: 556 ILM 558



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 205/422 (48%), Gaps = 30/422 (7%)

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           Q  +   A ++++ + + G  PD   Y  ++S  CK ++++ A +VL  +      P   
Sbjct: 148 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAA 202

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           +YN ++ +LC    ++  F V   ++    +P VITYT ++ A                 
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA----------------- 245

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
             CK G +  A   +  +   GC P+V+++  L+R L + G+  +   +   M++ G  P
Sbjct: 246 -FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 304

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + V+Y+ILI  LC  G  + A  +L + ++ G  P+  +Y  LI  + K G L  AI   
Sbjct: 305 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIW 364

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M   GC P++V Y  ++  FCK    +QA  + +K+    CPPN  ++NT+  +L   
Sbjct: 365 NDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDC 424

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
               RALG+  EM   G  P+  TYN LI  L R+G   +A+ ++ +M+S     ++++Y
Sbjct: 425 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 484

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG------IGYGGWRAEAMEL 496
           N ++ G C+TR   E++  +  M  +G +PN  T+  +I        +    W   AM +
Sbjct: 485 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 544

Query: 497 AN 498
            N
Sbjct: 545 VN 546



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 24/357 (6%)

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
           +LC    + +A K+ D++ R  C P  +TY  ++       + D+A ++L  M       
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM------- 197

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                            P   SYN ++  L    + +E   ++++M+ RGL+PNV+TY+ 
Sbjct: 198 ----------------PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 241

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           ++ + C+ G+   A  +L      G TP+  ++  L+     DGR+  A++   +M+++G
Sbjct: 242 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 301

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P  V+YN ++   C  G+   A  I   +   GC PNV +Y+T+      +GD   A+
Sbjct: 302 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 361

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + ++M   G +P+ + Y +++   C+  M ++A  L+  M      P  +++N +I   
Sbjct: 362 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 421

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           C  RR+  ++ V   M   GC PN  TY  LI G+   G   +A+ +   + S H I
Sbjct: 422 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS-HGI 477



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 174/370 (47%), Gaps = 19/370 (5%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+   +   +  MV  GC P+VV  T L++  F + + + A+ +   +   G  P   
Sbjct: 248 KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTV 307

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           +YN LI G C    ++ A+ +L+ +   G  P+V TY+ +I      G +  A  +++ +
Sbjct: 308 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 367

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
            R  CKP V+ YT ++                     CKK M  QA   +  +    C P
Sbjct: 368 SRSGCKPNVVVYTNMVDV------------------FCKKLMFNQAKSLIDKMLLENCPP 409

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           + +++N L+R+L +  +      +  EM   G  PN  TY+ LI  L R+G   DA+ ++
Sbjct: 410 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 469

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
              +  G+     +Y+ ++S  C+      A+ F+  MI  G  P+   ++ I+ A+CK 
Sbjct: 470 TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 529

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
           G    A  +   ++ V C  N+  Y  + + L +    + A+  + +ML +GI P+ +T+
Sbjct: 530 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 589

Query: 408 NSLISCLCRD 417
           N L+  + R+
Sbjct: 590 NVLVRGVFRN 599



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 19/306 (6%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+     G    +   + SM  +GC P+V   + LI  F +      A+ +   + + G
Sbjct: 312 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 371

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V  Y  ++  FCK      A  ++D++      P+ VT+N +I SLC    +  A 
Sbjct: 372 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRAL 431

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            VF ++ R  C P   TY  LI                   G+ ++G  G A   V  ++
Sbjct: 432 GVFHEMRRHGCVPNGRTYNELIH------------------GLFREGNCGDALHMVTEMQ 473

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           S G +  +++YN ++  L       E    + +MI +G++PN  T+S +I + C++G+  
Sbjct: 474 SHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVR 533

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  +L A        +   Y  L++  C   +L  A+ +L  M+ +G  P+ V +N ++
Sbjct: 534 MAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 593

Query: 342 AAFCKN 347
               +N
Sbjct: 594 RGVFRN 599



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 19/268 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-IL 98
           +  LI    +AG    ++     M  +GCKP+VV+ T ++  F ++   N+A  +++ +L
Sbjct: 344 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 403

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   P+   +N LI   C   ++  A  V   +R  G  P+  TYN +I  L   G   
Sbjct: 404 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 463

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A  +  ++     + +++TY  ++                   G+C+  M  +A  FV 
Sbjct: 464 DALHMVTEMQSHGIELSLVTYNTVVS------------------GLCQTRMSREAMVFVG 505

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +  +G QP+  +++ ++      G+      ++  M       N++ Y+IL++ LC   
Sbjct: 506 KMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQD 565

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLI 306
           K  DA+  L     +G+ P+  +++ L+
Sbjct: 566 KLVDAMTYLLKMLYEGIYPNTVTWNVLV 593


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 19/453 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+   F+AG   ES  +   M+  G   D+V+CT LI   F+  KS++A  +   L K  
Sbjct: 232 LVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLN 291

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   Y A+I G+CK   ++ A  +L  +  +   P+VVTY+ +I     +GM++ A 
Sbjct: 292 CIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAV 351

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAF---- 214
           ++  ++L  N  P    Y  LI   +  G+ D A+ L +EM   G+ +   +  AF    
Sbjct: 352 RIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNL 411

Query: 215 ----------QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
                        + + S+G   D ++Y  L+      G+      +  +M   G++ +V
Sbjct: 412 KRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDV 471

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           V Y++LI+ L R GK  DA  V    +E GL PD  +Y+ +I+AYCK G+L+ AI+  + 
Sbjct: 472 VAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNE 530

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M     +P+ +  N ++    K G  ++A+++  ++   G  PNV+ +  + +A      
Sbjct: 531 MKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCER 590

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
               L M   ++  G++ +   YNSLI+ LC  GM   A  +L +M         ++YN 
Sbjct: 591 ADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNA 650

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           +I G  K+  I +++     M  +G  P   TY
Sbjct: 651 LIHGHFKSSHIEKALATYTQMLNEGVSPGIRTY 683



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 216/445 (48%), Gaps = 40/445 (8%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R  K +E+    + M++ G   D V  T L+  FF+  + + A  + E + + G + DV 
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           AYN LI+G  +  + + A  V   +R  G +PD  TYN MI + C +G +E+A K+++++
Sbjct: 473 AYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEM 531

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKGMVGQAFQFVRSLESRG 224
              +  P  IT  IL+      G+T++A+ +L+EM   G+C                   
Sbjct: 532 KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGIC------------------- 572

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
             P+V  +  LL       + +   ++   ++  GL+ N   Y+ LI+ LC  G T+ A 
Sbjct: 573 --PNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRAT 630

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            VL    ++G++ D  +Y+ LI  + K   ++ A+     M+++G  P I  YN +L   
Sbjct: 631 LVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGL 690

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
              G   +A EI  K+ D G  P+ S YNT+ S     G+K  A+    EM++KG+ P  
Sbjct: 691 LAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKT 750

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC-------------K 451
            TYN LI    + G +D+A  LL +M+  R  P   +Y+I+I G+C             K
Sbjct: 751 STYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKK 810

Query: 452 TRRINESIEVLAAMFEKGCKPNETT 476
           T R  E+  + A M EKG  P E T
Sbjct: 811 TYR-TEARTLFAEMNEKGFVPCENT 834



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 203/434 (46%), Gaps = 28/434 (6%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           D V     I  F Q+  +N+    + I+ K     D F  N L+ GFC+   ++    V+
Sbjct: 77  DTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVM 136

Query: 130 DRL--------RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
           D L         +    P++VTY  +I + C +  +  A  ++++++ D   P V+TY+ 
Sbjct: 137 DNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSS 196

Query: 182 LIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLN 241
           +I                   G+CK+GM+ +A   +R ++  G  P+ + Y +L+ +L  
Sbjct: 197 IIN------------------GLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 242 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 301
            G   E     ++MI  G+  ++V  + LI  L + GK+++A  +     +    P+  +
Sbjct: 239 AGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNIT 298

Query: 302 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLS 361
           Y  +I  YCK G +D A   L  M     +P++V Y++I+  + K G  D A+ I +K+ 
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 362 DVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVD 421
           D    PN   Y T+      +G +  A+ + +EM   G+E +    ++ I+ L R   ++
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKME 418

Query: 422 EAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           EA GL   M S       ++Y  ++ GF KT R + +  +   M E G K +   Y +LI
Sbjct: 419 EAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLI 478

Query: 482 EG-IGYGGWRAEAM 494
            G +  G + AE++
Sbjct: 479 NGLLRLGKYDAESV 492



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 191/448 (42%), Gaps = 42/448 (9%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-------PDVFAYNALISGFCKANQI 122
           P + +  +LI +F      N    V ++ + Y E       P+VF +N L+  +CK   +
Sbjct: 9   PTLPLWNRLIYQF------NATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHL 62

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
            LA   LD +R+     D VTYN  I   C +G+    F     +++ +      T  IL
Sbjct: 63  SLA---LDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNIL 119

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL--------ESRGCQPDVISYNM 234
           ++                  G C+ G V      + +L         +   +P++++Y  
Sbjct: 120 VK------------------GFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTT 161

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+          E   L  EMIS G  P+VVTYS +I+ LC+ G   +A  +LR   + G
Sbjct: 162 LISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMG 221

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + P+   Y  L+ +  K G    +  +   MI  G   D+V   T++    K G +D+A 
Sbjct: 222 VNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAE 281

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
            +F  L+ + C PN  +Y  M       GD   A  ++ +M  K + P+ +TY+S+I+  
Sbjct: 282 AMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGY 341

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
            + GM+D AV ++  M      P    Y  +I G  K  + + ++++   M   G + N 
Sbjct: 342 TKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENS 401

Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
                 I  +  G    EA  L   ++S
Sbjct: 402 FIVDAFINNLKRGRKMEEAEGLCKYMMS 429



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 182/423 (43%), Gaps = 65/423 (15%)

Query: 132 LRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
           +R+    P +  +N +I    + G++   + ++ ++L     P V T+ IL+ A      
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHA------ 55

Query: 192 TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                        CK G +  A   +R+++      D ++YN  +      G   +G   
Sbjct: 56  ------------WCKMGHLSLALDLIRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGF 100

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE--------KGLTPDAYSYD 303
           ++ M+ +    +  T +IL+   CR G  +    V+    +          L P+  +Y 
Sbjct: 101 LSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYT 160

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            LISAYCK   L  A+   + MISDG LPD+V Y++I+   CK G   +A  +  ++  +
Sbjct: 161 TLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKM 220

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE---------------------- 401
           G  PN   Y  +  +L+ +G    +    S+M+  G+                       
Sbjct: 221 GVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEA 280

Query: 402 -------------PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
                        P+ ITY ++I   C+ G +D A  LL DME  +  P V++Y+ II G
Sbjct: 281 EAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIING 340

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
           + K   ++ ++ ++  M ++   PN   Y  LI+G    G +  A++L N +  ++ +  
Sbjct: 341 YTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEM-KLNGLEE 399

Query: 509 DTF 511
           ++F
Sbjct: 400 NSF 402


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 226/475 (47%), Gaps = 29/475 (6%)

Query: 42  KLIKRSFRAGKFDESLYFIES-MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK 100
           +LI +  R+G  + +   +++ M+ NG K D   C  L+    + R+  K   +M  ++ 
Sbjct: 122 QLISKLCRSGNTNLAWNILDNLMMLNGLK-DAAPCNALLTGLGKAREFGKMNLLMRKMKD 180

Query: 101 YG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG------FSPDVVTYNIMIGSLCS 153
              +P V  +  LI+  CK  +I+ A +V ++++          +PD + YN +I  LC 
Sbjct: 181 MNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCK 240

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G  E A  +  ++  D C PT  T+  LI      G+ + A KL +EM           
Sbjct: 241 VGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVIT 300

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 GMCK   +  A +F R ++ +G + + ++Y + +    N+    +  + + EM 
Sbjct: 301 LNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G  P+ V Y  LI  L + G+ +DA  V+   KE G   D   Y+ LIS +CK  +LD
Sbjct: 361 KDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLD 420

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTM 375
            A E+L+ M   G  PD V YNT+++ F K GN   A +  +K+++  G  P V +Y  +
Sbjct: 421 RAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGAL 480

Query: 376 FSALWSSGDKIRALGMISEM--LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
             A   + +   A+ +  EM  ++  + P+ + YN LI  LC+   V+ A+ LL DM+  
Sbjct: 481 IHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR 540

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
              P   +YN I         ++++ +++  M E+ C P+  T  +L E +   G
Sbjct: 541 GVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVG 595



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 220/495 (44%), Gaps = 63/495 (12%)

Query: 52  KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYN 110
           K DE    +     +   PD +  T+LI K  +   +N A  +++ ++   G  D    N
Sbjct: 97  KEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCN 156

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
           AL++G  KA +    N ++ +++     P V+T+ I+I  LC    I+ A +VF+++  +
Sbjct: 157 ALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGE 216

Query: 171 N------CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
                    P  I Y  LI                   G+CK G   +A   +  + S  
Sbjct: 217 KEETKVFVAPDTIMYNTLID------------------GLCKVGRQEEALCLMGKMRSDQ 258

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C P   ++N L+      G+ E   KL  EM +  +EPNV+T + L+  +C+  +   AV
Sbjct: 259 CAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAV 318

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
           +  R  ++KGL  +  +Y   I+A+C    ++ A+EFLD M  DGC PD V Y T++   
Sbjct: 319 EFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGL 378

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
            + G  D A  +  KL + G   +   YN + S         RA   ++EM   G++PD 
Sbjct: 379 AQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438

Query: 405 ITYNSLIS------------------------------------CLCRDGMVDEAVGLLV 428
           +TYN+LIS                                      C +  +DEA+ +  
Sbjct: 439 VTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFK 498

Query: 429 DME--STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
           +M   +++  P  + YNI+I   CK  ++N ++ +L  M  +G  PN TTY  + + +  
Sbjct: 499 EMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRD 558

Query: 487 GGWRAEAMELANALV 501
             W  +A +L + +V
Sbjct: 559 KNWLDKAFKLMDRMV 573



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 191/408 (46%), Gaps = 27/408 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANG------CKPDVVMCTKLIKKFFQERKSNKAVR 93
           F  LI    +  + D++L   E M            PD +M   LI    +  +  +A+ 
Sbjct: 190 FGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALC 249

Query: 94  VM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           +M ++      P    +N LI+G+C++ +IE+A+K+ + + +    P+V+T N ++  +C
Sbjct: 250 LMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMC 309

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------- 202
               I +A + F  + +   K   +TYT+ I A       +KAM+ LDEM          
Sbjct: 310 KHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAV 369

Query: 203 -------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G+ + G +  A   V  L+  G   D + YN+L+       K +  ++ + EM
Sbjct: 370 VYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEM 429

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA-AKEKGLTPDAYSYDPLISAYCKDGR 314
              G++P+ VTY+ LIS   + G  + A   ++   +E+GL+P  ++Y  LI AYC +  
Sbjct: 430 ELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNN 489

Query: 315 LDLAIEFLDYM--ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
           +D AI+    M  ++    P+ V YN ++ + CK    + AL + + +   G  PN ++Y
Sbjct: 490 IDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTY 549

Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           N++F AL       +A  ++  M+ +   PD IT   L   L   G +
Sbjct: 550 NSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 168/389 (43%), Gaps = 57/389 (14%)

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           GM++ A   F  L  D+          +I   +  G+ D AM +LDEM + +        
Sbjct: 20  GMVDEALAAFSTL--DSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPES------- 70

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE--KLMTEMISRGLEPNVVTYSILIS 272
           +F  + ++ G     I +N LL+     G+ +E E   L+++     + P+ +  + LIS
Sbjct: 71  EFRPNDKTAG-----IVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLIS 125

Query: 273 SLCRDGKTEDAVDVL-----------------------------------RAAKEKGLTP 297
            LCR G T  A ++L                                   R  K+  + P
Sbjct: 126 KLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQP 185

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDG------CLPDIVNYNTILAAFCKNGNAD 351
              ++  LI+  CK  R+D A+E  + M  +         PD + YNT++   CK G  +
Sbjct: 186 TVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQE 245

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL +  K+    C P  +++N + +    SG+   A  + +EM +  IEP+ IT N+L+
Sbjct: 246 EALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLV 305

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
             +C+   +  AV     M+    +   ++Y + I  FC    +N+++E L  M + GC 
Sbjct: 306 DGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCF 365

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANAL 500
           P+   Y  LI G+   G   +A  + + L
Sbjct: 366 PDAVVYYTLICGLAQAGRLDDASSVVSKL 394



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 21/231 (9%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           +AG+ D++   +  +   G   D V    LI +F ++ K ++A   +  +E  G +PD  
Sbjct: 380 QAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSV 439

Query: 108 AYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            YN LIS F K    +LA+K + ++    G SP V TY  +I + C    I+ A K+F +
Sbjct: 440 TYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKE 499

Query: 167 L--LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           +  +     P  + Y ILI +   + Q + A+ LLD+M                  +  K
Sbjct: 500 MNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDK 559

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
             + +AF+ +  +  + C PD I+  +L   L  +G+  + +K     ++R
Sbjct: 560 NWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCMNR 610



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 4/160 (2%)

Query: 43  LIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
           LI    + G F  +  F++ M    G  P V     LI  +      ++A+++ + +   
Sbjct: 444 LISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNV 503

Query: 102 GE---PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
                P+   YN LI   CK  Q+  A  +LD ++ RG  P+  TYN +  +L  +  ++
Sbjct: 504 ASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLD 563

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            AFK+ D+++   C P  IT  IL +     G+  K  K 
Sbjct: 564 KAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKF 603


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 234/482 (48%), Gaps = 23/482 (4%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I  S RAG  D +    + M A+GC+PD      L+    +    ++A+R+++ +E
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G  P+V  Y  L+ GFC A+++E A  VL+R++ +G S    TY  ++         E
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKE 302

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF-- 216
            A+++  + +  +     I Y  L+          +A++L  +M   K+G +  +  F  
Sbjct: 303 RAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMS--KRGYLLGSTTFSI 360

Query: 217 -----VRSLES------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                V+ LES            +G       Y M++++ L      +  K  ++M+S G
Sbjct: 361 VIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDG 420

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L  +V +Y+I+I    + G+ E A++ ++  +E G +P+  +++ LI+ Y K G +  A 
Sbjct: 421 LLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK 480

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            FL  ++  G +PD++ + +++   C     D A   F ++S+ G  PNV +YN +   L
Sbjct: 481 AFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGL 540

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
            S+G   +A+ ++++M   GI PD  ++N+ I   CR   +++A  L  DM      P  
Sbjct: 541 CSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDS 600

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGC-KPNETTYVLLIEGIGYGGWRAEAMELAN 498
            +YN +I   C  RR++E+ E++ AM    C    + TY  ++  +   G  +EA    N
Sbjct: 601 YTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMN 660

Query: 499 AL 500
            L
Sbjct: 661 KL 662



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 213/450 (47%), Gaps = 22/450 (4%)

Query: 48  FRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            R G    S   +  + + GC+    +   L++ + +   ++ A  V   + + G  P  
Sbjct: 121 LRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPST 180

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             YNA+I+   +A  ++ A     ++ + G  PD  TYN ++  +C RG+++ A ++  Q
Sbjct: 181 AIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQ 240

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------MCKKGMVGQAFQFVR 218
           + R   +P V+TYT+L+       + ++A+ +L+ M            + +V  AF+ + 
Sbjct: 241 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLE 300

Query: 219 S-----LESRGCQPD----VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                 + S   + D     I+Y+ LL  L      +E  +L  +M  RG      T+SI
Sbjct: 301 KERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSI 360

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY--CKDGRLDLAIEFLDYMIS 327
           +I    +  ++ D  +++    +KG       Y  +I ++  CKD  +  A ++   M+S
Sbjct: 361 VIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKD--ISKANKYFSQMVS 418

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           DG L  + +YN ++  F K G  ++ALE  + + + G  PN+ ++NT+ +     G+   
Sbjct: 419 DGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHD 478

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A   +  ++  G+ PD IT+ SLI  LC    +D+A     +M     RP V +YN++I 
Sbjct: 479 AKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIH 538

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G C    ++++IE+L  M   G  P+  ++
Sbjct: 539 GLCSAGHVSKAIELLNKMKMDGITPDAYSF 568



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 81/145 (55%)

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
            ++ ++ + G A  A E+F ++  +G  P+ + YN + +A   +G    A     +M + 
Sbjct: 150 ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPAD 209

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  PD  TYN+L+  +CR G+VDEA+ L+  ME    RP V++Y +++ GFC   R+ E+
Sbjct: 210 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 269

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEG 483
           + VL  M EKG    E TY  L+ G
Sbjct: 270 VCVLERMKEKGVSATEATYRSLVHG 294



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 127/280 (45%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            + ++G V  +   V  + S GC+        L+ +   +G      ++  ++   GL P
Sbjct: 119 ALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRP 178

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +   Y+ +I++  R G  + A    +     G  PD ++Y+ L+   C+ G +D A+  +
Sbjct: 179 STAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLV 238

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G  P++V Y  ++  FC     ++A+ + E++ + G     ++Y ++    +  
Sbjct: 239 KQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRC 298

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            +K RA  M+SE +        I Y++L+ CL ++ M  EAV L   M    +     ++
Sbjct: 299 LEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTF 358

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +I+I    K    ++  E++    +KG       Y+++I+
Sbjct: 359 SIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIK 398



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%)

Query: 305 LISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVG 364
           L+ ++ + G    A E    +   G  P    YN ++AA  + G  D A   F+++   G
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C P+  +YNT+   +   G    AL ++ +M   GI P+ +TY  L+   C    V+EAV
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +L  M+      T  +Y  ++ G  +      +  +L+   E     +   Y  L+  +
Sbjct: 271 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCL 330

Query: 485 GYGGWRAEAMELANAL 500
                  EA+ELA  +
Sbjct: 331 SKNDMDKEAVELAKKM 346



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 53/123 (43%)

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           AL   G  + +  +++++ S G E  E    +L+    R G+   A  + V +     RP
Sbjct: 119 ALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRP 178

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           +   YN +I    +   ++ +      M   GC+P+  TY  L+ G+   G   EA+ L 
Sbjct: 179 STAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLV 238

Query: 498 NAL 500
             +
Sbjct: 239 KQM 241


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 232/507 (45%), Gaps = 48/507 (9%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM- 95
           E  + +LI     AG+ DE++     M  + C P+V   T LIK   + +  +KA+ ++ 
Sbjct: 258 EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLD 316

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+LE+   PD+  YN+LI+G C+A  ++ A ++L  ++ RG  PD  TY   I  LC   
Sbjct: 317 EMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN 376

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
            +E A ++FD L  +     VI Y++LI      G+ D+A  L ++M             
Sbjct: 377 RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFN 436

Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G+C  G + +A      +   G +P V ++N+L+  +L  G +++  K + +M+S 
Sbjct: 437 ALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G +P   TY+  I   C  GK ++A D++   KE+G+ PD ++Y  LI AY K G    A
Sbjct: 497 GEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSA 556

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFC-------KNGNA--------------------- 350
            + L  M    C P    + +++           K+G                       
Sbjct: 557 FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMME 616

Query: 351 -DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
            D  +E+FE++   GC P+   Y  + S +    +   AL ++ +M  +GI P E+ +N+
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +ISC C+     EA  ++ DM  +   P +     +I G  +         V   +   G
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCG 736

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMEL 496
              +E  + +LI+G+   G   E  +L
Sbjct: 737 YNDDEIAWKILIDGMLKQGLVEEFSQL 763



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 191/381 (50%), Gaps = 23/381 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD F   + I G+C++  ++ A +V + + +R    + V+YN +I  LC  G I+ A  +
Sbjct: 225 PDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSL 280

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++  D C P V TYT LI+  +      KAM LLDEM                 LE R
Sbjct: 281 FVRMKDDCCYPNVYTYTALIKG-LCRKNVHKAMGLLDEM-----------------LE-R 321

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
              PD+I+YN L+      G  +   +L++ M  RGL P+  TY   I  LC+  + E+A
Sbjct: 322 NLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEA 381

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +  +  E+G++ +   Y  LI  YCK G++D A    + M+S  C P+   +N ++  
Sbjct: 382 RRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C  GN  +AL +F+++  +G  P V ++N +   +   GD   A   + +M+S G +P 
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             TYN+ I   C  G V EA  ++V M+     P   +Y  +I  + K      + +VL 
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 464 AMFEKGCKPNETTYVLLIEGI 484
           +MF+  C+P+  T++ LI+ +
Sbjct: 562 SMFDADCEPSHHTFLSLIKQL 582



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 203/405 (50%), Gaps = 23/405 (5%)

Query: 96  EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
           E+LE++   D++ +N +I+ +CK   ++ A + + ++   G SPD  T    I   C   
Sbjct: 182 EMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSK 241

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            ++SAF+VF+++   N     ++Y  LI                   G+C+ G + +A  
Sbjct: 242 DVDSAFRVFEEMPNRN----EVSYNQLIH------------------GLCEAGRIDEAVS 279

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               ++   C P+V +Y  L++ L       +   L+ EM+ R L P+++TY+ LI+  C
Sbjct: 280 LFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQC 338

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R G  + A  +L   KE+GL PD  +Y   I   CK  R++ A    D +  +G   +++
Sbjct: 339 RAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVI 398

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y+ ++  +CK G  D+A  +FEK+    C PN  ++N +   L S+G+   AL +  +M
Sbjct: 399 MYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           +  G++P   T+N LI  + + G  D+A   L  M S+  +P   +YN  I  +C   ++
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+ +++  M E+G  P++ TY  LI+  G  G    A ++  ++
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 200/462 (43%), Gaps = 27/462 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  +I    + G   E+  F+  M+  G  PD    T  I  + + +  + A RV E + 
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP 254

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
              E    +YN LI G C+A +I+ A  +  R++     P+V TY  +I  LC R  +  
Sbjct: 255 NRNE---VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHK 310

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG---------------- 203
           A  + D++L  N  P +ITY  LI      G  D A +LL  M                 
Sbjct: 311 AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370

Query: 204 -MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +CK   V +A +   SL   G   +VI Y++L+     +GK +E   L  +M+S+   P
Sbjct: 371 FLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N  T++ LI  LC  G  ++A+ +     + GL P  Y+++ LI    K G  D A + L
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+S G  P    YN  +  +C  G   +A ++  ++ + G PP+  +Y ++  A    
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  ++  M     EP   T+ SLI  L     V E  G    +ES      V   
Sbjct: 551 GLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSG-ETGVESVSNFGDVPGS 609

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           N+      K    +  IE+   M + GC P+   Y  LI GI
Sbjct: 610 NMW-----KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGI 646



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 196/453 (43%), Gaps = 47/453 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    RAG  D +   +  M   G  PD       I    +  +  +A R+ + L 
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLT 389

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G   +V  Y+ LI G+CK  +++ A  + +++ S+  SP+  T+N +I  LCS G ++
Sbjct: 390 EEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLK 449

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG--------------- 203
            A  +FDQ+++   KPTV T+ ILI   + +G  D A K L +M                
Sbjct: 450 EALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFI 509

Query: 204 --MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
              C  G V +A   +  ++  G  PD  +Y  L++    +G       ++  M     E
Sbjct: 510 EVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCE 569

Query: 262 PNVVTYSILISSLC-------RDGKT----------------------EDAVDVLRAAKE 292
           P+  T+  LI  L        + G+T                      +  +++    ++
Sbjct: 570 PSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEK 629

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
            G TPD+  Y+ LIS  CK   L +A++ LD M  +G  P  + +N +++  CK     +
Sbjct: 630 HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGE 689

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A  I E +   G  P +    T+   L+  G+  R   +  ++   G   DEI +  LI 
Sbjct: 690 AANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILID 749

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            + + G+V+E   L  +ME      +  +Y+I+
Sbjct: 750 GMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 142/296 (47%), Gaps = 5/296 (1%)

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           G+V +  Q    +       D+ ++N+++     MG  +E ++ M +MI  GL P+  T 
Sbjct: 171 GLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTS 230

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           +  I   CR    + A  V      +    +  SY+ LI   C+ GR+D A+     M  
Sbjct: 231 TSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKD 286

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           D C P++  Y  ++   C+  N  +A+ + +++ +    P++ +YN++ +    +G    
Sbjct: 287 DCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDS 345

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
           A  ++S M  +G+ PD+ TY   I  LC+   V+EA  L   +        VI Y+++I 
Sbjct: 346 AYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLID 405

Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           G+CK  +++E+  +   M  K C PN  T+  LI G+   G   EA+ L + +V M
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM 461



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 149/352 (42%), Gaps = 12/352 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI     AG   E+L   + MV  G KP V     LI +  ++   + A + ++ + 
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             GE P    YNA I  +C A +++ A  ++ +++  G  PD  TY  +I +    G+  
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQAT-----MLEGQTDKAMKLLDEMG------MCKK 207
           SAF V   +   +C+P+  T+  LI+       ++E   +  ++ +   G      M K 
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKM 614

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
                  +    +E  GC PD   Y  L+  +  +       KL+ +M   G+ P+ + +
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVF 674

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
           + +IS  C+  K  +A +++      G +P       LI    ++G  +        +  
Sbjct: 675 NAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRG 734

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
            G   D + +  ++    K G  ++  ++FE++   GC  +  +Y+ +   L
Sbjct: 735 CGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 223/479 (46%), Gaps = 19/479 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  LI   F+ G   E+      MV  G   DVV+ T L+   F+   +N A  + ++L 
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   Y+ALI G CK   +     +L  +  +   P+V+ Y+ ++     +G++ 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  V  ++++ N  P V  Y  LI       Q   A+ L  EM                
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             + + G + +A +  + + SRG  PD ++Y  ++      GK  +   +  EM  +   
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +VV Y++LI+ L + GK E         ++ GL PD+ +++ +I+AYCK+G L  A++ 
Sbjct: 400 FDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKL 458

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M S G  P+ +  N ++   C  G  ++ +++   +  +G  P  +++  +  A   
Sbjct: 459 LNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSK 518

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           S      L M  +++  G++ D  TYN+LIS  CR GM+  A  +  DM        +I+
Sbjct: 519 SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIIT 578

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           YN +I G+C +  + ++  V + M  +G  PN  TY +L+ G+       EA  L N +
Sbjct: 579 YNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 205/420 (48%), Gaps = 22/420 (5%)

Query: 98  LEKYGEPD----VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           L  Y  P+    V  +N LI G+C+  +I  A ++L+ +++ G +PD+VTYN ++   C 
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G + +A K+  ++   N +P VITYT LI A       + A+ + DEM           
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G V +A    R +E  G  P+  SY  L+ +L   G   E   L   M+
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            RG+  +VV Y+ L+  L + G   +A D+ +   E+ L P+  +Y  LI  +CK G ++
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                L  M      P+++ Y++I+  + K G  ++A+++  K+      PNV  Y T+ 
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
              + +  +  AL +  EM S+G+E +    +S ++ L R G ++EA  L  DM S    
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAME 495
           P  ++Y  ++ GF K  + +++  +   M EK    +   Y +LI G+   G + +E+  
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 228/521 (43%), Gaps = 27/521 (5%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
            F  LI    R G+   ++  +E M   G  PD+V    L+  F +      A ++M EI
Sbjct: 19  HFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEI 78

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                EP+V  Y  LI  +CK+  +E A  + D +  +   PDVVTY  ++  LC  G +
Sbjct: 79  SLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A  VF ++      P   +Y  LI +   EG   +A  L   M               
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+ K GM   A    + L      P+ ++Y+ L+     +G   +GE L+ EM  + +
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNV+ YS ++    + G   +A+DV+R   ++ + P+ + Y  LI  Y K  +  +A++
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M S G   +    ++ +    ++G  ++A E+F+ +   G  P+  +Y +M    +
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G +  A  +  EM  K    D + YN LI+ L + G   E+      M      P   
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSA 437

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++N +I  +CK   +  ++++L  M   G KPN  T  +L++ +   G   + M+L N +
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497

Query: 501 VSM--------HAISRDTFKRLNRTFPLLDVYKEISHLATK 533
           + M        H    D   +  R   +L ++ ++  +  K
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 226/497 (45%), Gaps = 54/497 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  ++    ++ M      P+V++ + ++  + ++   N+A+ VM +++
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   P+VF Y  LI G+ KA+Q  +A  +   ++SRG   +    +  + +L   G +E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++F  ++     P  + YT ++      G+   A  +  EM                
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K G   ++  F   +   G  PD  ++N ++      G      KL+ EM S GL+
Sbjct: 410 NGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLK 468

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP------------------------ 297
           PN +T +IL+  LC  G+ E  +D+L      G  P                        
Sbjct: 469 PNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHM 528

Query: 298 -----------DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                      D  +Y+ LIS +C+ G +  A      M+  G L DI+ YN ++  +C 
Sbjct: 529 HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCI 588

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           + +  +A  +  ++   G  PNV +YN +   L ++     A G++++M  +G+ P+  T
Sbjct: 589 SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATT 648

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L+S   + G + E V L  +M +  F P   +YN++I  F K ++++++ E++  M 
Sbjct: 649 YDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708

Query: 467 EKGCKPNETTYVLLIEG 483
            +G  PN +TY +LI G
Sbjct: 709 VRGIPPNSSTYDILICG 725



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 228/530 (43%), Gaps = 90/530 (16%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI  + +  + ++AV ++E ++  G  PD+  YN L++GFCK   +  A K++  +    
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+V+TY  +I + C    +E A  ++D++   +  P V+TYT ++      G+ ++A 
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            +  EM                  + K+G V +AF     +  RG   DV+ Y  L+  L
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR----------------------- 276
              G     E +   ++   L PN VTYS LI   C+                       
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262

Query: 277 -------DGKTE-----DAVDVLRAAKEKGLTPDAYSYDPLISAYCK------------- 311
                  DG T+     +A+DV+R   ++ + P+ + Y  LI  Y K             
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKE 322

Query: 312 ----------------------DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                  GR++ A E    M+S G LPD VNY +++  F K G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A  I +++++     +V +YN + + L+  G K  +    + M   G+ PD  T+N+
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNT 441

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I+  C++G +  A+ LL +M+S   +P  I+ NI++   C    I +++++L  M   G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA-ISRDTFKRLNRTF 518
             P  TT+  +++           + + + LV M   +   T+  L  TF
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 226/516 (43%), Gaps = 64/516 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  +E++  +  MV     P+V +   LI  +F+  +   A+ + + ++  G E + F
Sbjct: 274 KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             ++ ++   ++ ++E A+++   + SRG  PD V Y  M+      G    AF +  ++
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 168 LRDNCKPTVITYTILIQATMLEG--QTDKAMKLLDEMGM--------------CKKGMVG 211
              +    V+ Y +LI      G  +++     + ++G+              CK+G +G
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLG 453

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP--------- 262
            A + +  ++S G +P+ I+ N+L++ L   G+ E+   L+ +M+  G  P         
Sbjct: 454 NALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513

Query: 263 --------------------------NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                                     ++ TY+ LIS+ CR G    A  V +    KG+ 
Sbjct: 514 DASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
            D  +Y+ LI  YC    L  A      M+++G  P++  YN +L          +A  +
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGL 633

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++ + G  PN ++Y+ + S     G+    + +  EM++KG  P   TYN LISC  +
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR---INESIE---------VLAA 464
              + +A  L+ +M+     P   +Y+I+I G+ K  +   +N+S++         +   
Sbjct: 694 GKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEE 753

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           M EKG  P E T   +   +   G +A+A  + N L
Sbjct: 754 MNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 89/168 (52%)

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           + ++N ++  +C+NG   +A+E+ E +   G  P++ +YNT+ +     GD   A  ++ 
Sbjct: 17  VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E+    +EP+ ITY +LI   C+   +++A+ +  +M      P V++Y  I+ G CK+ 
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           ++ E+  V   M E G  PN  +Y  LI+ +   G  AEA  L   +V
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 222/460 (48%), Gaps = 19/460 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    ++G   E++   + M  +G  P V   + L+  F  +R     V ++  +E +G
Sbjct: 188 LIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF-GKRDVETVVWLLREMEDHG 246

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V++Y   I    +A + E A K+L ++   G  PDVVT  ++I  LC  G +  A 
Sbjct: 247 VKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAK 306

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            VF ++   + KP  +TY  L+      G +   +++ + M                  +
Sbjct: 307 DVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDAL 366

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G V +A      ++ +G +P   SYN L+   L   +     +L   M   G  PN 
Sbjct: 367 CQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNG 426

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY + I+   + G++  A+      K KG+ PD  + + ++ +  K GRL +A      
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHE 486

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + S G  PD + Y  ++    K  NAD+A+++F ++ +  C P+V + N++   L+ +G 
Sbjct: 487 LKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGR 546

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  E+    ++P + TYN+L++ L R+G V E + LL +M S  + P +I+YN 
Sbjct: 547 GNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNT 606

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++   CK   +N ++ +L  M  KGC P+ ++Y   + G+
Sbjct: 607 VLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGL 646



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 233/512 (45%), Gaps = 55/512 (10%)

Query: 31   LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
            ++ D  +  +  L+    R GK  E ++ +E M +N   P+++    ++    +  + N 
Sbjct: 560  MNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNY 619

Query: 91   AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            A+ ++  +   G  PD+ +YN  + G  K +++  A ++  +++ +  +PD  T   ++ 
Sbjct: 620  ALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILP 678

Query: 150  SLCSRGMIESAFKVFDQ-LLRDNCKPTVITYTILIQATMLEGQTDKAMK----------L 198
            S    G++  A     + +L+   K    ++  L++  +     +K+++          L
Sbjct: 679  SFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738

Query: 199  LDEM-------GMCKKGMVGQAFQFVRSLESRG--------------------------- 224
            LD+         +CK     +A + V+  ES G                           
Sbjct: 739  LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL 798

Query: 225  --------CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
                    C PD  +YN++L  +    + E+  K+  EM  +G E   VTY+ +IS L +
Sbjct: 799  FSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVK 858

Query: 277  DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
                 +A+D+      +G +P   +Y PL+    KDG+++ A +  D M+  GC P+   
Sbjct: 859  SKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAI 918

Query: 337  YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
            YN +L  +   GN ++  E+F+ + D G  P++ SY  +  AL ++G    +L    ++ 
Sbjct: 919  YNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLT 978

Query: 397  SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
              G+EPD ITYN LI  L R G ++EAV L  DME +   P + +YN +IL   K  +  
Sbjct: 979  ELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAA 1038

Query: 457  ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
            E+ ++   + + G KPN  TY  LI G    G
Sbjct: 1039 EAGKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 19/393 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P V  Y+ L+  F K + +E    +L  +   G  P+V +Y I I  L   G  E A+K+
Sbjct: 215 PSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKI 273

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             ++  + CKP V+T T+LIQ                   +C  G V  A      +++ 
Sbjct: 274 LQKMEDEGCKPDVVTNTVLIQI------------------LCDAGRVSDAKDVFWKMKAS 315

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
             +PD ++Y  LL    + G      ++   M + G   NVV Y+ ++ +LC+ G+ ++A
Sbjct: 316 DQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEA 375

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            DV    K+KG+ P  YSY+ LIS + K  RL+ A+E  ++M   G  P+   Y   +  
Sbjct: 376 SDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINY 435

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           + K+G + +A++ +E +   G  P+V + N +  +L  SG    A  +  E+ S G+ PD
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPD 495

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            ITY  +I C  +    DEA+ +  +M  TR  P V++ N +I    K  R NE+ ++  
Sbjct: 496 NITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFH 555

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            + E    P + TY  L+ G+G  G   E M L
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 206/445 (46%), Gaps = 20/445 (4%)

Query: 38   TQFMKLIKRSFRAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
            T    ++    + G  +E+L+ + E ++  G K D      L++   +     K++   E
Sbjct: 671  TTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAE 730

Query: 97   -ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
             I       D F  + LI   CK+ +   A++++ +  S G S    +YN +I  L    
Sbjct: 731  NIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDEN 790

Query: 156  MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +I+ A  +F ++ R  C P   TY +++ A        K+M++ D + + K+        
Sbjct: 791  LIDVAEGLFSEMKRLGCDPDEFTYNLILDAM------GKSMRIEDMLKVQKE-------- 836

Query: 216  FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
                +  +G +   ++YN ++  L+      E   L  +++S G  P   TY  L+  L 
Sbjct: 837  ----MHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLL 892

Query: 276  RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
            +DGK EDA D+     + G  P+   Y+ L++ Y   G  +   E    M+  G  PDI 
Sbjct: 893  KDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIK 952

Query: 336  NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            +Y  ++ A C  G  + +L  F +L+++G  P++ +YN +   L  SG    A+ + ++M
Sbjct: 953  SYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM 1012

Query: 396  LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
               GI P+  TYNSLI  L ++G   EA  +  ++    ++P V +YN +I G+  +   
Sbjct: 1013 EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGST 1072

Query: 456  NESIEVLAAMFEKGCKPNETTYVLL 480
            + +      M   GC PN +TY+ L
Sbjct: 1073 DNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 224/525 (42%), Gaps = 89/525 (16%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           + G+ DE+    + M   G +P       LI  F +  + N A+ +   +  +G  P+ +
Sbjct: 368 QVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGY 427

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y   I+ + K+ +   A K  + ++S+G  PDVV  N ++ SL   G +  A +VF +L
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
                 P  ITYT++I+        D+AMK+  EM                 +E+R C P
Sbjct: 488 KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEM-----------------IETR-CVP 529

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           DV++ N L+ TL   G+  E  K+  E+    L+P   TY+ L++ L R+GK ++ + +L
Sbjct: 530 DVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLL 589

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT-------- 339
                    P+  +Y+ ++   CK+G ++ A+  L  M   GC+PD+ +YNT        
Sbjct: 590 EEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKE 649

Query: 340 --------------------------ILAAFCKNGNADQALEIF-EKLSDVGCPPNVSSY 372
                                     IL +F KNG  ++AL    E +   G   + SS+
Sbjct: 650 DRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSF 709

Query: 373 NTMFSA-----------------------------------LWSSGDKIRALGMISEMLS 397
           +++                                      L  S   + A  ++ +  S
Sbjct: 710 HSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFES 769

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+     +YN+LI  L  + ++D A GL  +M+     P   +YN+I+    K+ RI +
Sbjct: 770 LGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIED 829

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
            ++V   M  KG +    TY  +I G+       EAM+L   L+S
Sbjct: 830 MLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMS 874



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 148/339 (43%), Gaps = 44/339 (12%)

Query: 212 QAFQFVRSLESRGCQPDVI----SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTY 267
           +A Q  +S+     QP ++    S N +L  +   G+  +  ++   M  + ++ NV T+
Sbjct: 94  EALQLFKSVAQ---QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150

Query: 268 SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS 327
             +  SL  +G    A   L   KE G+  ++Y+Y+ LI    K G    A+E    M +
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210

Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           DG +P +  Y+ ++ AF K  + +  + +  ++ D G  PNV SY      L  +G    
Sbjct: 211 DGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269

Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP---------- 437
           A  ++ +M  +G +PD +T   LI  LC  G V +A  +   M+++  +P          
Sbjct: 270 AYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLD 329

Query: 438 -------------------------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
                                     V++Y  ++   C+  R++E+ +V   M +KG +P
Sbjct: 330 KCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEP 389

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
            + +Y  LI G         A+EL N + ++H  + + +
Sbjct: 390 QQYSYNSLISGFLKADRLNHALELFNHM-NIHGPTPNGY 427



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 119/277 (42%), Gaps = 18/277 (6%)

Query: 16   VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
            +R+    + +   H   ++     +  +I    ++    E++     +++ G  P     
Sbjct: 825  MRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTY 884

Query: 76   TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
              L+    ++ K   A  + + +  YG +P+   YN L++G+  A   E   ++   +  
Sbjct: 885  GPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVD 944

Query: 135  RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            +G +PD+ +Y ++IG+LC+ G +  +   F QL     +P +ITY +LI      G+ ++
Sbjct: 945  QGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEE 1004

Query: 195  AMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
            A+ L ++M                  + K+G   +A +    L   G +P+V +YN L+ 
Sbjct: 1005 AVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIG 1064

Query: 238  TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                 G  +       +MI  G  PN  TY  L + L
Sbjct: 1065 GYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 212/421 (50%), Gaps = 13/421 (3%)

Query: 82  FFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
           F      + AV +   +L++   P    +N ++    K+        +  ++  RG  P+
Sbjct: 37  FHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 96

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           +V  NI+I S C  G I SAF V  ++L+   KP  IT   LI+   L G      K+ D
Sbjct: 97  LVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG------KIHD 150

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
           +   C  G +  A      +      PDV ++ +L+      G+ +E + ++  M+ +G+
Sbjct: 151 KH--CIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI 208

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           +P VVTY+ L+       +   A  +     + G++PD  SY  LI+ +CK   +D A+E
Sbjct: 209 KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAME 268

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
            L  M     +P++V Y++++   CK+G    AL++ +++ D G PPN+ +Y+++  AL 
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +     A+ ++++M ++GI+P+  TY  LI  LC+ G +++A  +  D+        V 
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           +Y ++I GFC     +E++ +L+ M + GC PN  TY ++I  +    ++ +  E+A  L
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL----FKKDENEMAEKL 444

Query: 501 V 501
           +
Sbjct: 445 L 445



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 203/425 (47%), Gaps = 29/425 (6%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D+++     ++     P  +   K++    + +  +  + + + +E  G +P++   N L
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES----------AFK 162
           I+ FC+   I  A  VL ++   G+ P+ +T N +I  LC  G I            A  
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           +F++++ +N  P V T+TIL+                   G CK+G V +A   +  +  
Sbjct: 164 LFNKMILENINPDVYTFTILVD------------------GFCKEGRVKEAKNVLAMMMI 205

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           +G +P V++YN L+     + +  + + +   M   G+ P++ +YSILI+  C+    ++
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A+++L+    K + P+  +Y  LI   CK G++  A++ +D M   G  P+IV Y++IL 
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           A CKN   D A+ +  ++ + G  PN+ +Y  +   L  SG    A  +  ++L KG   
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           +  TY  +I   C  G+ DEA+ LL  ME     P   +Y IIIL   K      + ++L
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445

Query: 463 AAMFE 467
             M E
Sbjct: 446 CEMIE 450



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 28/408 (6%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    ++  +   LY  + M   G KP++V C  LI  F Q      A  V+  +
Sbjct: 64  EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI 123

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS----------RGFSPDVVTYNIM 147
            K G +P+    N LI G C   +I   + ++ +L+              +PDV T+ I+
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTIL 183

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           +   C  G ++ A  V   ++    KP V+TY  L+    L  Q +KA  + + M     
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                       G CK  M+ +A + ++ +  +   P+V++Y+ L+  L   GK     K
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           L+ EM  RG  PN+VTYS ++ +LC++ + ++A+ +L   K +G+ P+ Y+Y  LI   C
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC 363

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           + G+L+ A +  + ++  G   ++  Y  ++  FC  G  D+AL +  K+ D GC PN  
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAK 423

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
           +Y  +  +L+   +   A  ++ EM+    +      N LI+ +   G
Sbjct: 424 TYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 199/402 (49%), Gaps = 28/402 (6%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +   Y +  + F   N ++ A  + +RL  +  +P  + +N ++GSL       +   + 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++     KP ++   ILI +                   C+ G +  AF  +  +   G
Sbjct: 86  QKMEFRGIKPNLVNCNILINS------------------FCQLGHIPSAFSVLTKILKMG 127

Query: 225 CQPDVISYNMLLRTL-LN---------MGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            +P+ I+ N L++ L LN         +GK ++   L  +MI   + P+V T++IL+   
Sbjct: 128 YKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGF 187

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++G+ ++A +VL     +G+ P   +Y+ L+  Y    +++ A    + M   G  PDI
Sbjct: 188 CKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDI 247

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
            +Y+ ++  FCK    D+A+E+ +++      PNV +Y+++   L  SG    AL ++ E
Sbjct: 248 QSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           M  +G  P+ +TY+S++  LC++  VD A+ LL  M++   +P + +Y I+I G C++ +
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGK 367

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           + ++ +V   +  KG   N  TY ++I+G    G   EA+ L
Sbjct: 368 LEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTL 409



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 20/361 (5%)

Query: 25  RPNTHLLSFDVKETQFM-KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
           +PNT  L+  +K      K+  +    GK  +++     M+     PDV   T L+  F 
Sbjct: 129 KPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFC 188

Query: 84  QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           +E +  +A  V+ ++   G +P V  YN+L+ G+    Q+  A  + + +   G SPD+ 
Sbjct: 189 KEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQ 248

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           +Y+I+I   C   M++ A ++  ++      P V+TY+ LI                   
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID------------------ 290

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+CK G +  A + V  +  RG  P++++Y+ +L  L    + +    L+T+M ++G++P
Sbjct: 291 GLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N+ TY+ILI  LC+ GK EDA  V      KG   + Y+Y  +I  +C  G  D A+  L
Sbjct: 351 NMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLL 410

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M  +GC+P+   Y  I+ +  K    + A ++  ++ +      V+  N + +++W +
Sbjct: 411 SKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVT 470

Query: 383 G 383
           G
Sbjct: 471 G 471



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 185/373 (49%), Gaps = 29/373 (7%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           ++ A  +F++LL+ N  P  I +  ++ + +        + L  +M              
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM-------------- 88

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
               E RG +P++++ N+L+ +   +G       ++T+++  G +PN +T + LI  LC 
Sbjct: 89  ----EFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCL 144

Query: 277 DGKTED----------AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           +GK  D          AVD+      + + PD Y++  L+  +CK+GR+  A   L  M+
Sbjct: 145 NGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM 204

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G  P +V YN+++  +      ++A  IF  ++ +G  P++ SY+ + +         
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A+ ++ EM  K I P+ +TY+SLI  LC+ G +  A+ L+ +M      P +++Y+ I+
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHA 505
              CK  +++ +I +L  M  +G +PN  TY +LI+G+   G   +A ++  + LV  H 
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384

Query: 506 ISRDTFKRLNRTF 518
           ++  T+  + + F
Sbjct: 385 LNVYTYTVMIQGF 397



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            +FQF+ +        + I Y     T  N    ++   L   ++ +   P  + ++ ++
Sbjct: 15  HSFQFLINTHF-----NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKIL 69

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            SL +       + + +  + +G+ P+  + + LI+++C+ G +  A   L  ++  G  
Sbjct: 70  GSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYK 129

Query: 332 PDIVNYNTILAAFCKNGNAD----------QALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           P+ +  NT++   C NG              A+++F K+      P+V ++  +      
Sbjct: 130 PNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCK 189

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
            G    A  +++ M+ +GI+P  +TYNSL+        V++A  +   M      P + S
Sbjct: 190 EGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQS 249

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           Y+I+I GFCK + ++E++E+L  M  K   PN  TY  LI+G+   G  + A++L + +
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM 308



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 13/252 (5%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N + Y    ++   +   +DAV +     ++  TP    ++ ++ +  K       +   
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M   G  P++VN N ++ +FC+ G+   A  +  K+  +G  PN  + NT+   L  +
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 383 GD---------KIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           G          K++ A+ + ++M+ + I PD  T+  L+   C++G V EA  +L  M  
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
              +P V++YN ++ G+   +++N++  +   M + G  P+  +Y +LI G        E
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 493 AMELANALVSMH 504
           AMEL   L  MH
Sbjct: 266 AMEL---LKEMH 274



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 1/145 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
           +  + D ++  +  M   G +P++   T LIK   Q  K   A +V E +L K    +V+
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  +I GFC     + A  +L ++   G  P+  TY I+I SL  +   E A K+  ++
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448

Query: 168 LRDNCKPTVITYTILIQATMLEGQT 192
           +  N    V     LI +  + G +
Sbjct: 449 IETNFDGRVALTNDLIASIWVTGSS 473


>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
 gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
          Length = 442

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 209/440 (47%), Gaps = 23/440 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+A + D+++   E MVA  C PD+   T +I    +  K N+A  V + + 
Sbjct: 12  YTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMN 71

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +PD+  Y +L+ G  KA+ ++ A K+L  + SRG  P  VTY   I  LC  G +E
Sbjct: 72  RKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVE 131

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A K+  ++ +  C   V+    +    +LEG+ ++A+ L DEM                
Sbjct: 132 EAGKLVREMGK-MCAAEVLH--CIFGGYVLEGKIEEALALKDEM---------------- 172

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
               +G   DV  Y  L+  L  + + +E +++   M+ +G  P+  TY +++S  C+ G
Sbjct: 173 --VKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQG 230

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           K + A  V+      GL  + + Y+ L+  +    R   AI   D M+    +P IV YN
Sbjct: 231 KMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYN 290

Query: 339 TILAAFCKNGN-ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
            ++   CK G  AD  L + E     G  P + SY T+   L  +G    A+ + +EM+ 
Sbjct: 291 ILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVD 350

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G+ PD  +  SLI  L     +DEA  LL DM      P  ++YN ++   C   ++  
Sbjct: 351 NGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGP 410

Query: 458 SIEVLAAMFEKGCKPNETTY 477
           + +VL  M +  C P+ +T+
Sbjct: 411 AWDVLVEMMDNSCVPDGSTF 430



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 175/389 (44%), Gaps = 51/389 (13%)

Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
           VV Y  +I +L      + A   F++++   C P + T+T++I                 
Sbjct: 9   VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVIT---------------- 52

Query: 201 EMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+CK G + +A +  + +  +G +PD+I Y  L+  L      +E  KL+ E++SRG+
Sbjct: 53  --GLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGM 110

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLR------AAK----------------------- 291
           +P  VTY+  IS LC++G+ E+A  ++R      AA+                       
Sbjct: 111 KPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALALKD 170

Query: 292 ---EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
              +KG+T D   Y  LI       R D A E  + M+  G +PD   Y  I++ FCK G
Sbjct: 171 EMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQG 230

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
               A ++ E +   G   N   YN++            A+ +   ML K + P  +TYN
Sbjct: 231 KMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYN 290

Query: 409 SLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
            L+  LC+ G   +A  +L +M E     PT++SY  +I G  K  R +E+I+V   M +
Sbjct: 291 ILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVD 350

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            G  P+  +   LI+ +       EA +L
Sbjct: 351 NGVVPDCPSCTSLIQALAMADRMDEATQL 379



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 3/202 (1%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  +I+A  K  R D AI   + M++  C PD+  +  ++   CK G  ++A E+F+++
Sbjct: 11  AYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEM 70

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
           +  G  P++  Y ++   L  +     A  ++ E++S+G++P E+TY S IS LC++G V
Sbjct: 71  NRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRV 130

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA  L+ +M        +   + I  G+    +I E++ +   M +KG   +   Y  L
Sbjct: 131 EEAGKLVREMGKMCAAEVL---HCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNL 187

Query: 481 IEGIGYGGWRAEAMELANALVS 502
           I G+ Y     EA E+  A+V 
Sbjct: 188 IHGLFYVRRNDEAQEMFEAMVQ 209



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 70/137 (51%)

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
           V +Y  + +AL+ +    +A+     M+++  +PD  T+  +I+ LC+ G ++ A  +  
Sbjct: 9   VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68

Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +M    ++P +I Y  ++ G  K   ++E+ ++L  +  +G KP E TY   I G+   G
Sbjct: 69  EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNG 128

Query: 489 WRAEAMELANALVSMHA 505
              EA +L   +  M A
Sbjct: 129 RVEEAGKLVREMGKMCA 145


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 223/479 (46%), Gaps = 19/479 (3%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL- 98
           +  LI   F+ G   E+      MV  G   DVV+ T L+   F+   +N A  + ++L 
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   Y+ALI G CK   +     +L  +  +   P+V+ Y+ ++     +G++ 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  V  ++++ N  P V  Y  LI       Q   A+ L  EM                
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             + + G + +A +  + + SRG  PD ++Y  ++      GK  +   +  EM  +   
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +VV Y++LI+ L + GK E         ++ GL PD+ +++ +I+AYCK+G L  A++ 
Sbjct: 400 FDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKL 458

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           L+ M S G  P+ +  N ++   C  G  ++ +++   +  +G  P  +++  +  A   
Sbjct: 459 LNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSK 518

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           S      L M  +++  G++ D  TYN+LIS  CR GM+  A  +  DM        +I+
Sbjct: 519 SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIIT 578

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           YN +I G+C +  + ++  V + M  +G  PN  TY +L+ G+       EA  L N +
Sbjct: 579 YNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 205/420 (48%), Gaps = 22/420 (5%)

Query: 98  LEKYGEPD----VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           L  Y  P+    V  +N LI G+C+  +I  A ++L+ +++ G +PD+VTYN ++   C 
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G + +A K+  ++   N +P VITYT LI A       + A+ + DEM           
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVT 124

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+CK G V +A    R +E  G  P+  SY  L+ +L   G   E   L   M+
Sbjct: 125 YTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            RG+  +VV Y+ L+  L + G   +A D+ +   E+ L P+  +Y  LI  +CK G ++
Sbjct: 185 VRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVN 244

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
                L  M      P+++ Y++I+  + K G  ++A+++  K+      PNV  Y T+ 
Sbjct: 245 KGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLI 304

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
              + +  +  AL +  EM S+G+E +    +S ++ L R G ++EA  L  DM S    
Sbjct: 305 DGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL 364

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI-GYGGWRAEAME 495
           P  ++Y  ++ GF K  + +++  +   M EK    +   Y +LI G+   G + +E+  
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 228/521 (43%), Gaps = 27/521 (5%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EI 97
            F  LI    R G+   ++  +E M   G  PD+V    L+  F +      A ++M EI
Sbjct: 19  HFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEI 78

Query: 98  LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
                EP+V  Y  LI  +CK+  +E A  + D +  +   PDVVTY  ++  LC  G +
Sbjct: 79  SLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           E A  VF ++      P   +Y  LI +   EG   +A  L   M               
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+ K GM   A    + L      P+ ++Y+ L+     +G   +GE L+ EM  + +
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNV+ YS ++    + G   +A+DV+R   ++ + P+ + Y  LI  Y K  +  +A++
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               M S G   +    ++ +    ++G  ++A E+F+ +   G  P+  +Y +M    +
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
            +G +  A  +  EM  K    D + YN LI+ L + G   E+      M      P   
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSA 437

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           ++N +I  +CK   +  ++++L  M   G KPN  T  +L++ +   G   + M+L N +
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497

Query: 501 VSM--------HAISRDTFKRLNRTFPLLDVYKEISHLATK 533
           + M        H    D   +  R   +L ++ ++  +  K
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 226/497 (45%), Gaps = 54/497 (10%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI    + G  ++    ++ M      P+V++ + ++  + ++   N+A+ VM +++
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           ++   P+VF Y  LI G+ KA+Q  +A  +   ++SRG   +    +  + +L   G +E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A ++F  ++     P  + YT ++      G+   A  +  EM                
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+ K G   ++  F   +   G  PD  ++N ++      G      KL+ EM S GL+
Sbjct: 410 NGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLK 468

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP------------------------ 297
           PN +T +IL+  LC  G+ E  +D+L      G  P                        
Sbjct: 469 PNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHM 528

Query: 298 -----------DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                      D  +Y+ LIS +C+ G +  A      M+  G L DI+ YN ++  +C 
Sbjct: 529 HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCI 588

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           + +  +A  +  ++   G  PNV +YN +   L ++     A G++++M  +G+ P+  T
Sbjct: 589 SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATT 648

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           Y+ L+S   + G + E V L  +M +  F P   +YN++I  F K ++++++ E++  M 
Sbjct: 649 YDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQ 708

Query: 467 EKGCKPNETTYVLLIEG 483
            +G  PN +TY +LI G
Sbjct: 709 VRGIPPNSSTYDILICG 725



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 228/530 (43%), Gaps = 90/530 (16%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI  + +  + ++AV ++E ++  G  PD+  YN L++GFCK   +  A K++  +    
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             P+V+TY  +I + C    +E A  ++D++   +  P V+TYT ++      G+ ++A 
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
            +  EM                  + K+G V +AF     +  RG   DV+ Y  L+  L
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR----------------------- 276
              G     E +   ++   L PN VTYS LI   C+                       
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262

Query: 277 -------DGKTE-----DAVDVLRAAKEKGLTPDAYSYDPLISAYCK------------- 311
                  DG T+     +A+DV+R   ++ + P+ + Y  LI  Y K             
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKE 322

Query: 312 ----------------------DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
                                  GR++ A E    M+S G LPD VNY +++  F K G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              A  I +++++     +V +YN + + L+  G K  +    + M   G+ PD  T+N+
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG-KYESESFHTGMRQLGLAPDSATFNT 441

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           +I+  C++G +  A+ LL +M+S   +P  I+ NI++   C    I +++++L  M   G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA-ISRDTFKRLNRTF 518
             P  TT+  +++           + + + LV M   +   T+  L  TF
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 226/516 (43%), Gaps = 64/516 (12%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G  +E++  +  MV     P+V +   LI  +F+  +   A+ + + ++  G E + F
Sbjct: 274 KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
             ++ ++   ++ ++E A+++   + SRG  PD V Y  M+      G    AF +  ++
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 168 LRDNCKPTVITYTILIQATMLEG--QTDKAMKLLDEMGM--------------CKKGMVG 211
              +    V+ Y +LI      G  +++     + ++G+              CK+G +G
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLG 453

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP--------- 262
            A + +  ++S G +P+ I+ N+L++ L   G+ E+   L+ +M+  G  P         
Sbjct: 454 NALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513

Query: 263 --------------------------NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
                                     ++ TY+ LIS+ CR G    A  V +    KG+ 
Sbjct: 514 DASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
            D  +Y+ LI  YC    L  A      M+++G  P++  YN +L          +A  +
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGL 633

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++ + G  PN ++Y+ + S     G+    + +  EM++KG  P   TYN LISC  +
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR---INESIE---------VLAA 464
              + +A  L+ +M+     P   +Y+I+I G+ K  +   +N+S++         +   
Sbjct: 694 GKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEE 753

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           M EKG  P E T   +   +   G +A+A  + N L
Sbjct: 754 MNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 89/168 (52%)

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           + ++N ++  +C+NG   +A+E+ E +   G  P++ +YNT+ +     GD   A  ++ 
Sbjct: 17  VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           E+    +EP+ ITY +LI   C+   +++A+ +  +M      P V++Y  I+ G CK+ 
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           ++ E+  V   M E G  PN  +Y  LI+ +   G  AEA  L   +V
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV 184


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 190/405 (46%), Gaps = 27/405 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRG--FSPDVVTYNIMIGSLCSRGMIESA 160
           +PDV  Y  L++G CK+  +  A KVLDR+ S G    PD+   N ++  LC  G ++ A
Sbjct: 163 KPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQA 222

Query: 161 FKVFDQLLRD--NCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
               D+ +R    C P  +TY  L  A    G    A K++  M                
Sbjct: 223 IIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTII 282

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDV----ISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
            G+C+ G VG A +F R  E R   P+     ++Y+ L    L+    +   +L  EM  
Sbjct: 283 GGLCRVGRVGAALEFFR--EKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMAD 340

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G  P+ V Y  +IS L + G+  DA     + K+ G   DA +Y+ LI  +C+  +L  
Sbjct: 341 HGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHE 400

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A E L+ M   G  PD+  YNT+L+  CK G+     E+   + D GC P+V ++ T+  
Sbjct: 401 AYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVH 460

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
               +G    AL +   M    I+P+ + YN+LI  LC+   VD A+ L  +M       
Sbjct: 461 GYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPA 520

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
            V +YN ++ G    +   ++ E++  M E+ C PN  T  +L+E
Sbjct: 521 NVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 211/471 (44%), Gaps = 66/471 (14%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVL 129
           P  ++ +KL+++F    ++   +R   +      PD+  +N+L++   +A  +    ++ 
Sbjct: 96  PSALLLSKLVRRFSSPAEAAGFLRD-SLASGAPAPDISIFNSLLTALGRAGNLRGMTELF 154

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL---RDNCKPTVITYTILIQAT 186
             +R     PDVVTY I++  LC  G +  A KV D++     D C    I  T++    
Sbjct: 155 TSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVD--- 211

Query: 187 MLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV--RSLESRGCQPDVISYNMLLRTLLNMGK 244
                           G+CK G + QA  FV  R     GC P+ ++YN L      +G 
Sbjct: 212 ----------------GLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGD 255

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD----AY 300
                K++  M   G+ PNV+T + +I  LCR G+   A++  R  +++ + P+    A 
Sbjct: 256 IGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR--EKRTVWPEARGNAV 313

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV------------------------- 335
           +Y  L SA+     +D+A+E    M   G  PD V                         
Sbjct: 314 TYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASM 373

Query: 336 ----------NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
                      YN ++  FC+     +A E+ E++  VG  P+V +YNT+ S L  +GD 
Sbjct: 374 KKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDF 433

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
                ++  M+  G +P  +T+ +L+   C+ G  DEA+ +   M+  R +P  + YN +
Sbjct: 434 SAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTL 493

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           I   CK+R ++ +I++   M EK    N TTY  L++G+       +A EL
Sbjct: 494 IDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFEL 544



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 24/390 (6%)

Query: 49  RAGKFDESLYFIESMVANGCK--PDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYG-E 103
           ++G   ++L  ++ M + G    PD+ +   ++    +  +  +A+  ++  +   +G  
Sbjct: 178 KSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCA 237

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P+   YN L   FC+   I +A K++ R+   G +P+V+T N +IG LC  G + +A + 
Sbjct: 238 PNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEF 297

Query: 164 F--DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           F   + +    +   +TY+ L  A +     D AM+L  EM                 G+
Sbjct: 298 FREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
            + G +  A     S++  G + D  +YN+L+       K  E  +L+ EM   GL+P+V
Sbjct: 358 TQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDV 417

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+S LC+ G      ++L    + G  P   ++  L+  YCK G+ D A+     
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M      P+ V YNT++   CK+   D A+++F+++ +   P NV++YN +   L     
Sbjct: 478 MDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKM 537

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCL 414
             +A  ++  M  +   P+ +T + L+  L
Sbjct: 538 AEKAFELMDRMREERCTPNYVTVDVLMEWL 567



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  L+    +AGK DE+L    SM     +P+ V+   LI    + R+ + A+++  E+ 
Sbjct: 455 FGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMR 514

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK    +V  YNAL+ G       E A +++DR+R    +P+ VT ++++  L   G  E
Sbjct: 515 EKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574

Query: 159 SAFKVFDQ 166
              K F Q
Sbjct: 575 R-LKCFMQ 581


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 213/473 (45%), Gaps = 19/473 (4%)

Query: 49  RAGKFDESLYFIESMVAN--GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDV 106
           +AG+ D+++  ++ M A   GC P+ V    +I    ++ +  KA ++++I+    +   
Sbjct: 241 KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASA 300

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F YN LI+G    + +E A  +L  + + G  P VVTYN +I  L   G  E+A   FD+
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +      P +ITY  LI      G   +A+ L  ++                 G C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           +  A +    +    C PDV +Y +L+     +           EM+S+GLEP+   Y+ 
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            IS+    G   +A  +      +G++ D  +Y+ LI   CK G L  A      M++DG
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDG 540

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
              D V Y  ++ A C+ G   +A  IF+ +   G  P+V +Y          G+   A 
Sbjct: 541 LRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAY 600

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           G   +ML +G+EP+E+TYN L+  LCR G  + A     +M      P   +Y ++I G 
Sbjct: 601 GWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGS 660

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           CK      +I +   M +KG  P+  T+  L +G G G        L N ++ 
Sbjct: 661 CKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYLENVVLG 713



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 216/478 (45%), Gaps = 57/478 (11%)

Query: 45  KRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-E 103
           ++S  A    + L   + M  +G  P V  C  +++      + +    V   + + G E
Sbjct: 167 QKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVE 226

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSR--GFSPDVVTYNIMIGSLCSRGMIESAF 161
           P +F YN L+  FCKA +++ A  +L  + +R  G  P+ VTYN++I  L  +G +E A 
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++ D ++R + K +  TY  LI   +     +KA  LL EM                  E
Sbjct: 287 QLVD-IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM------------------E 327

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           + G  P V++YN L+  L   G  E  +    EM ++GL P+++TY+ LI+  C+ G  +
Sbjct: 328 NEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLK 387

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A+ +    K  GL P   +Y+ LI  YC+ G L+ A    + M  + CLPD+  Y  ++
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILM 447

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
              C   N       F+++   G  P+  +YNT  SA  + G    A  +  EM+ +GI 
Sbjct: 448 NGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507

Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR------------------------- 436
            D +TYN LI  LC+ G + +A  L + M +   R                         
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNI 567

Query: 437 ----------PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
                     P+V++Y I I  +C+   +  +      M E+G +PNE TY +L+  +
Sbjct: 568 FDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 52/195 (26%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI      G+  E+    + MVA+G  P VV                             
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVV----------------------------- 581

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
                 Y   I  +C+   + LA     ++   G  P+ VTYN+++ +LC  G  ESA++
Sbjct: 582 -----TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQ 636

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
            F ++L     P   TYT+LI  +  EG    A++L  EM                    
Sbjct: 637 HFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM------------------HQ 678

Query: 223 RGCQPDVISYNMLLR 237
           +G  PD  ++N L +
Sbjct: 679 KGIHPDHCTHNALFK 693



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
           + L    EM   G+ P     N ++  L      D+   +  DM      P++ +YN ++
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 447 LGFCKTRRINESIEVLAAMFEK--GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             FCK  R+++++ +L  M  +  GC PN+ TY ++I G+   G   +A +L + +
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM 292


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 18/348 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF  +V  +NI++   C  G I  A KVFD++ + + +PTV+++  LI            
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN----------- 283

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK G + + F+    +E    +PDV +Y+ L+  L    K +    L  EM
Sbjct: 284 -------GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             RGL PN V ++ LI    R+G+ +   +  +    KGL PD   Y+ L++ +CK+G L
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   +D MI  G  PD + Y T++  FC+ G+ + ALEI +++   G   +   ++ +
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              +   G  I A   + EML  GI+PD++TY  ++   C+ G       LL +M+S   
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P+V++YN+++ G CK  ++  +  +L AM   G  P++ TY  L+EG
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 179/365 (49%), Gaps = 27/365 (7%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           MEIL+     +V+ +N L++ FCK   I  A KV D +  R   P VV++N +I   C  
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
           G ++  F++  Q+ +   +P V TY+ LI A   E + D A  L DE  MCK+G++    
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE--MCKRGLIPNDV 346

Query: 215 QFV-------------------RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
            F                    + + S+G QPD++ YN L+      G       ++  M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
           I RGL P+ +TY+ LI   CR G  E A+++ +   + G+  D   +  L+   CK+GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   L  M+  G  PD V Y  ++ AFCK G+A    ++ +++   G  P+V +YN +
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG------MVDEAVGLLVD 429
            + L   G    A  ++  ML+ G+ PD+ITYN+L+    R        +    +G++ D
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVAD 586

Query: 430 MESTR 434
           + S +
Sbjct: 587 LASYK 591



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 2/287 (0%)

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
           LLD M   K    G  + F   +   G   +V  +N+L+      G   + +K+  E+  
Sbjct: 211 LLDRM--MKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           R L+P VV+++ LI+  C+ G  ++   +    ++    PD ++Y  LI+A CK+ ++D 
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A    D M   G +P+ V + T++    +NG  D   E ++K+   G  P++  YNT+ +
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
               +GD + A  ++  M+ +G+ PD+ITY +LI   CR G V+ A+ +  +M+      
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + ++ ++ G CK  R+ ++   L  M   G KP++ TY ++++  
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 166/341 (48%), Gaps = 22/341 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + G  DE       M  +  +PDV   + LI    +E K + A  + + + 
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337

Query: 100 KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  P+   +  LI G  +  +I+L  +   ++ S+G  PD+V YN ++   C  G + 
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A  + D ++R   +P  ITYT LI                   G C+ G V  A +  +
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLID------------------GFCRGGDVETALEIRK 439

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G + D + ++ L+  +   G+  + E+ + EM+  G++P+ VTY++++ + C+ G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +    +L+  +  G  P   +Y+ L++  CK G++  A   LD M++ G +PD + YN
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           T+L    ++ N+ +    + +  ++G   +++SY ++ + L
Sbjct: 560 TLLEGHHRHANSSKR---YIQKPEIGIVADLASYKSIVNEL 597



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 106/205 (51%)

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + G   + Y ++ L++ +CK+G +  A +  D +      P +V++NT++  +CK GN D
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +   +  ++      P+V +Y+ + +AL        A G+  EM  +G+ P+++ + +LI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
               R+G +D        M S   +P ++ YN ++ GFCK   +  +  ++  M  +G +
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P++ TY  LI+G   GG    A+E+
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEI 437


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 205/434 (47%), Gaps = 19/434 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
           RAG    +      M   GC       T L+          +A+ V + +      PD  
Sbjct: 119 RAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTH 178

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  ++ G C+A + E A  +L+   S GF P++V YN +I   C+ G +E A KVF+ +
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
             + C P V TYT LI                   G+CK G V +A      +   G +P
Sbjct: 239 DGNRCSPNVRTYTELIH------------------GLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           +V++Y  L++   N G  +   +L+  M + GL PN  T+S+LI +LC+  K E+A   L
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            +  +KG+  +   Y  LI   CK G++D A E +  MIS+G +PD  +Y++++   C+ 
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
               QA  + E + + G   +  +Y  +   L           +  +M++ GI PD +TY
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTY 460

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
              +   C +G +++A  ++V M      P +++YN +I G+     ++++      M  
Sbjct: 461 TVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVG 520

Query: 468 KGCKPNETTYVLLI 481
           KG KPNE +Y +L+
Sbjct: 521 KGWKPNEDSYTVLL 534



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 215/473 (45%), Gaps = 30/473 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     AG   E++     M A+ C PD  +   ++    +  ++ +A  ++E   
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP++  YNALI G+C A ++E A KV + +     SP+V TY  +I  LC  G +E
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F +++    +P V+TYT LIQ    EG    A +LL  M                
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  V +A  F+ SL  +G + + + Y  L+  L   GK +  ++LM +MIS G  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           P+  +YS LI  LCR  K   A  +L    EKG+     +Y  +I    ++   +   + 
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
            D MI+ G  PDIV Y   + ++C+ G  + A  +  ++ D G  PN+ +YNT+     +
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG------------LLVD 429
            G   +A      M+ KG +P+E +Y  L+  + +    D +V             LL D
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           +   +       Y+  I   C+  R+ E+      M      P+E  Y  +I+
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 194/417 (46%), Gaps = 21/417 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD +AY + + G+C+A  +  A +V   +  RG      TY  ++  L   GM+  A  V
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTV 164

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAM-------------------KLLDEMGM 204
           F  +  D+C P    Y  ++      G+T++A                     L+D  G 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID--GY 222

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A +    ++   C P+V +Y  L+  L   GK E    L + M+  GLEPNV
Sbjct: 223 CNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI   C +G  + A  +L   +  GL P+ +++  LI A CK  +++ A  FL  
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G   + V Y +++   CK G  D A E+ +K+   G  P+  SY+++   L     
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  M+ +M+ KGI+   +TY  +I  L R+   +    +   M +T   P +++Y +
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +  +C+  R+ ++  ++  M ++G  PN  TY  LI G    G  ++A      +V
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 173/374 (46%), Gaps = 18/374 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI+ +C A  I  A + L  L   G +PD   Y   +   C  GM+  A +VF  + 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
              C  T  TYT L+                   G+   GMV +A      + +  C PD
Sbjct: 135 LRGCLRTAFTYTALLH------------------GLLGAGMVREAMTVFVGMRADSCAPD 176

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              Y  ++  L   G+ EE E L+ E +S G EPN+V Y+ LI   C  G+ E A+ V  
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                  +P+  +Y  LI   CK G+++ A+     M+  G  P++V Y  ++   C  G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +   A  +   +   G  PN  +++ +  AL        A   +  ++ KG++ +E+ Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI  LC+ G +D A  L+  M S  F P   SY+ +I G C+ ++++++  +L  M EK
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 469 GCKPNETTYVLLIE 482
           G + +  TY ++I+
Sbjct: 417 GIQASPVTYTIIID 430



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 194/432 (44%), Gaps = 41/432 (9%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F+     +  LI     AG+ + +L   E M  N C P+V   T+LI    +  K  +A+
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +   + + G EP+V  Y ALI G C    ++ A ++L  + + G  P+  T++++I +L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C R  +E A      L++   K   + YT LI      G+ D A +L+ +M         
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+C++  + QA   +  +  +G Q   ++Y +++  L+     E  +K+  +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI+ G+ P++VTY++ + S C +G+ EDA  ++    ++G+ P+  +Y+ LI  Y   G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +  A    + M+  G  P+  +Y  +L    K  ++D +++I                  
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI------------------ 549

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
                W   D      ++ ++  + +      Y+  I CLCR   ++EA    + M++  
Sbjct: 550 -----WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604

Query: 435 FRPTVISYNIII 446
             P+   Y  II
Sbjct: 605 LTPSEDVYTSII 616



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A Q + SL   G  PD  +Y   +      G      ++   M  RG     
Sbjct: 83  CLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTA 142

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+  L   G   +A+ V    +     PD + Y  ++   C+ GR + A   L+ 
Sbjct: 143 FTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +S+G  P+IV YN ++  +C  G  + AL++FE +    C PNV +Y  +   L  SG 
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK 262

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA+ + S M+  G+EP+ +TY +LI   C +G +  A  LL  ME+    P   ++++
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSV 322

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I   CK  ++ E+   L ++ +KG K NE  Y  LI+G+   G    A EL   ++S
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 122/266 (45%), Gaps = 4/266 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R L      P +   N LL  L     + + E L + M +R    N+ TY+ LI++ C  
Sbjct: 30  RVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLA 85

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G    A   L +    GL PD+Y+Y   +  YC+ G L  A      M   GCL     Y
Sbjct: 86  GDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTY 145

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             +L      G   +A+ +F  +    C P+   Y TM   L  +G    A  ++ E +S
Sbjct: 146 TALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMS 205

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G EP+ + YN+LI   C  G ++ A+ +   M+  R  P V +Y  +I G CK+ ++  
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++ + + M E G +PN  TY  LI+G
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQG 291



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI+AYC  G +  A + L  ++  G  PD   Y + +  +C+ G    A  +F  +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              GC     +Y  +   L  +G    A+ +   M +    PD   Y +++  LC  G  
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA  LL +  S  F P ++ YN +I G+C    +  +++V   M    C PN  TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 481 IEGIGYGGWRAEAMELANALV 501
           I G+   G    AM L + +V
Sbjct: 254 IHGLCKSGKVERAMVLFSRMV 274



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP +   NT+L A  ++    +     E L+      N+ +Y T+ +A   +GD   A  
Sbjct: 38  LPPLRCLNTLLMALARH----RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            ++ +L  G+ PD   Y S +   CR GM+  A  + V M       T  +Y  ++ G  
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
               + E++ V   M    C P+   Y  ++ G+   G
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAG 191


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 225/473 (47%), Gaps = 27/473 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           R++S  E+   T    +D   +    +++     GK D +L+  E M+ +G  P ++M  
Sbjct: 99  RLASLRESVCQTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHN 158

Query: 77  KLIK---KFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLR 133
            L+    K     K++  VR  E+ E    P+  +YN LI G C  N ++ A  +   L 
Sbjct: 159 HLLNGLCKLGYIEKADGLVR--EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLN 216

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMI-ESAFKVFDQLL---RDNCKPTVITYTILIQATMLE 189
             G  P+ VT NI++ +LC +G+I  +  K+ +++L   + N    ++T TIL+ +    
Sbjct: 217 KYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCF-- 274

Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
                           K G V QA +  + +  +    D + YN+++R L + G      
Sbjct: 275 ----------------KNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAY 318

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
             M +M+ RG+ P+V TY+ LIS+LC+ GK + A D+    +  G+ PD  SY  +I   
Sbjct: 319 GFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGL 378

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           C  G +D A EFL  M+    LP+++ +N ++  + + G+   AL +   +   G  PNV
Sbjct: 379 CIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNV 438

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            + N +       G  I A  + +EM S  I PD  TYN L+   C  G +  A  L  +
Sbjct: 439 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDE 498

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           M     +P +I+Y  ++ G C   R+ E+  +L+ M   G   +   +++L++
Sbjct: 499 MLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVK 551



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 208/435 (47%), Gaps = 30/435 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N L++G CK   IE A+ ++  +R  G SP+ V+YN +I  LCS   ++ A  +
Sbjct: 152 PGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 211

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG----QAFQFVRS 219
           F  L +   KP  +T  I++ A                  +C+KG++G    +  + +  
Sbjct: 212 FSTLNKYGIKPNRVTCNIIVHA------------------LCQKGVIGNNNTKLLEEILD 253

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
                   D+++  +L+ +    G   +  ++  EM  + +  + V Y+++I  LC  G 
Sbjct: 254 SSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGN 313

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
              A   +    ++G+ PD ++Y+ LISA CK G+ D+A +    M + G  PD ++Y  
Sbjct: 314 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKV 373

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           I+   C  G+ D+A E  + +      P V  +N +       GD   AL +++ MLS G
Sbjct: 374 IIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYG 433

Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
           ++P+  T N+LI    + G + +A  +  +M ST+  P   +YN+++   C    +  + 
Sbjct: 434 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAF 493

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFP 519
           ++   M ++GC+P+  TY  L+ G+ + G   E    A +L+S   +S  T   +    P
Sbjct: 494 QLYDEMLKRGCQPDIITYTELVRGLCWKGRLKE----AESLLSRMQVSGITMDHV----P 545

Query: 520 LLDVYKEISHLATKD 534
            L + K+ + L   D
Sbjct: 546 FLILVKKYTRLQRPD 560



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 23/319 (7%)

Query: 71  DVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFCKANQIELANKVL 129
           D+V CT L+   F+     +A+ V + + +   P D   YN +I G C +  +  A   +
Sbjct: 262 DIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFM 321

Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
             +  RG +PDV TYN +I +LC  G  + A  +   +      P  I+Y ++IQ   ++
Sbjct: 322 CDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQ 381

Query: 190 GQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           G  D+A + L  M                 G  + G    A   +  + S G +P+V + 
Sbjct: 382 GDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTN 441

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           N L+   +  G+  +   +  EM S  + P+  TY++L+ + C  G    A  +     +
Sbjct: 442 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLK 501

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           +G  PD  +Y  L+   C  GRL  A   L  M   G   D V +  ++  + +    D+
Sbjct: 502 RGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDE 561

Query: 353 ALEIFEKL-----SDVGCP 366
           A  +++K        V CP
Sbjct: 562 AYLVYKKWLVTRNGGVSCP 580



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 64/121 (52%)

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           ++S ++++   L   G    AL +  +ML  G  P  I +N L++ LC+ G +++A GL+
Sbjct: 118 SLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M      P  +SYN +I G C    +++++ + + + + G KPN  T  +++  +   
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQK 237

Query: 488 G 488
           G
Sbjct: 238 G 238


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 220/452 (48%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AG + E+L  ++ M  +GC+PD V   +L   + +     +A + ++ +   G  P+ F
Sbjct: 207 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 266

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++ +    +++ A  + DR++  G+ P+V TYN++ G L  +    +  ++ +++
Sbjct: 267 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 326

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
            R  C P  +T+  ++      G  D   ++L+ M  C                 + G  
Sbjct: 327 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 386

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+    + S G  P + +YN LL  L   G W   + ++++M+  G +PN  +YS+L
Sbjct: 387 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 446

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +    + G       + +      + P       L+ A  K  RL+   +    + + G 
Sbjct: 447 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 506

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V +N++LA + KNG   +A E+F+ +   G  P++ +YN++      S +   A  
Sbjct: 507 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 566

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ ++ S  ++PD ++YN++I+  C+ G++ EA  +L +M +    P V++Y+ ++ G+ 
Sbjct: 567 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 626

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                NE+ EV+  M     KP E TY  +++
Sbjct: 627 SLEMFNEAREVVNYMIHHNLKPMELTYRRVVD 658



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 20/472 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  D+++ F E + A G  P VV    L++ F +     +A+RV++ +E  G +PD  
Sbjct: 172 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 231

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L   + +A   E A K LD + S+G  P+  TYN ++ +  + G ++ A  +FD++
Sbjct: 232 TYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM 291

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMV 210
            ++   P V TY ++      + +    +++L+EM                 +C K+GM 
Sbjct: 292 KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGME 351

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +  ++S G +    +YN L+      G      K+  EMIS G  P + TY+ L
Sbjct: 352 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 411

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ L R G    A  ++    + G  P+  SY  L+  Y K G     IE ++  +  G 
Sbjct: 412 LNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGT 470

Query: 331 L-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           + P  V   T++ A  K    +   + F+++   G  P++  +N+M +    +G   +A 
Sbjct: 471 IFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKAT 530

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            M   +   G+ PD ITYNSL+    +     EA  +L  ++S++ +P V+SYN +I GF
Sbjct: 531 EMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGF 590

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK   I E+  +L+ M   G  P   TY  L+ G        EA E+ N ++
Sbjct: 591 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMI 642



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 19/406 (4%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  D  A   ++    +  Q ++   +LD +    G   DV  Y  ++ +L   G  E A
Sbjct: 49  GAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERA 108

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM----------------G 203
            ++F +L R    PT++TY +++      G++  + + LL+EM                 
Sbjct: 109 LQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 168

Query: 204 MC-KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            C + G++ QA  F   L++RG  P V++YN LL+     G + E  +++ EM   G +P
Sbjct: 169 ACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQP 228

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + VTY+ L  +  R G  E+A   L     KGL P+ ++Y+ +++AY   GR+D A+   
Sbjct: 229 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 288

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M  +G +P++  YN I     K       LE+ E++S  GC PN  ++NTM +     
Sbjct: 289 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKR 348

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G +     +++ M S G+E    TYN+LIS   R G    A  +  +M S+ F P + +Y
Sbjct: 349 GMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTY 408

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           N ++    +    + +  +++ M + G KPN+ +Y LL++    GG
Sbjct: 409 NALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 454


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 36/422 (8%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGF-SPDVVTYNIMIGSLCSRGMIESAFKVF 164
           +F+YNA++  F KAN+I LA  V D++   G   PDV TY  +I   C  GMIE+A  VF
Sbjct: 217 LFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF 276

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
           D++    CKP ++TY  +I     +G  + AMK++D+M                  E+  
Sbjct: 277 DEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQM-----------------TETED 316

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           C PD ++Y  L+      G+ EE  K M EM+SR  EPNV+TY+ +I  LC +G  ++A 
Sbjct: 317 CMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAK 376

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            ++   +  GL  +  ++  ++   C  G+LD A   L  M+  G   D   Y  ++  +
Sbjct: 377 RMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEY 436

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G AD A+ + +++   G  P+VSS+N +F  L  SG   +A  ++ +M   G  P+ 
Sbjct: 437 CKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNF 496

Query: 405 ITYNSLISCLCR-DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
           ++Y+++I  LC+  G + E    + DM           Y+ ++ G+C+    + ++ +  
Sbjct: 497 LSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFC 556

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDV 523
            M + G   N  +++  ++G+     + +A E+              F+ ++R  P +D+
Sbjct: 557 EMLDMGYVINLESFLAFVKGLSA---KEKAFEV-----------EKFFEEMSRRCPGIDI 602

Query: 524 YK 525
           +K
Sbjct: 603 HK 604



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 173/330 (52%), Gaps = 23/330 (6%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PDV  Y  +I G+CK   IE A  V D +   G  P++VTYN MI   C +G++ESA K
Sbjct: 250 KPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMK 306

Query: 163 VFDQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           + DQ+   ++C P  +TYT LI                   G CK+G + +A +++  + 
Sbjct: 307 IVDQMTETEDCMPDTVTYTTLID------------------GYCKRGELEEAMKYMEEMV 348

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           SR C+P+V++YN ++  L   G  +E +++MT M   GL+ NV T++ ++  LC  GK +
Sbjct: 349 SRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLD 408

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           DA   L+     G+  DA +Y  +++ YCK G+ D AI  L  M S G  P + ++N + 
Sbjct: 409 DAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVF 468

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL-GMISEMLSKGI 400
               ++G  D+A  I  ++  +GC PN  SY+T+   L  +  ++  +   + +M   G 
Sbjct: 469 RILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGH 528

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
             D   Y+ L+   C DG  D A+ L  +M
Sbjct: 529 HLDASMYSWLVKGYCEDGNADMAMRLFCEM 558



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 164/309 (53%), Gaps = 21/309 (6%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE--PDVFAYNALISGFCKANQIEL 124
           GCKP++V    +I  F ++     A+++++ + +  +  PD   Y  LI G+CK  ++E 
Sbjct: 280 GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEE 339

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A K ++ + SR   P+V+TYN +I  LC  G ++ A ++  ++  +  K  V T+T +++
Sbjct: 340 AMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILK 399

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
              + G+ D A + L E       MVG            G + D  +Y +++     +GK
Sbjct: 400 GLCVVGKLDDAARHLKE-------MVGL-----------GMEADAKAYGVVVNEYCKIGK 441

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDP 304
            ++   L+ EM SRG+ P+V +++ +   L   GKT+ A  +LR  K+ G TP+  SY  
Sbjct: 442 ADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYST 501

Query: 305 LISAYCK-DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
           +I   CK  GR+    EF+D M  +G   D   Y+ ++  +C++GNAD A+ +F ++ D+
Sbjct: 502 VIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDM 561

Query: 364 GCPPNVSSY 372
           G   N+ S+
Sbjct: 562 GYVINLESF 570



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 54/328 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    + G+ +E++ ++E MV+  C                               
Sbjct: 324 YTTLIDGYCKRGELEEAMKYMEEMVSRNC------------------------------- 352

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
              EP+V  YNA+I G C    ++ A +++ R+R  G   +V T+  ++  LC  G ++ 
Sbjct: 353 ---EPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDD 409

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A +   +++    +     Y +++      G+ D A+ LL EM                 
Sbjct: 410 AARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEM----------------- 452

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR-DG 278
            +SRG  P V S+N + R L+  GK ++   ++ +M   G  PN ++YS +I  LC+  G
Sbjct: 453 -KSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKG 511

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +  +  + +      G   DA  Y  L+  YC+DG  D+A+     M+  G + ++ ++ 
Sbjct: 512 RMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFL 571

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCP 366
             +        A +  + FE++S   CP
Sbjct: 572 AFVKGLSAKEKAFEVEKFFEEMSRR-CP 598


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 53  FD-ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
           FD E+L   + M+ +G  P V   + L+  F + R     + ++  +E +G +P+V++Y 
Sbjct: 254 FDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT 313

Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
             I    +A + + A ++L  + + G  PDV+T+ ++I  LC  G I  A  VF ++ + 
Sbjct: 314 ICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 373

Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
           + KP  +TY  L+      G++   M++ + M                  +C+ G V +A
Sbjct: 374 DQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 433

Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
            +    ++ +G  P+  SYN L+   L   ++ +  +L   M   G +PN  T+ + I+ 
Sbjct: 434 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINY 493

Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
             + G++  A+      K KG+ PD  + + ++    K GRL +A      + + G  PD
Sbjct: 494 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 553

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
            + Y  ++    K    D+A++IF  + +  C P+V   N++   L+ +G    A  +  
Sbjct: 554 TITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFY 613

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
           ++    +EP + TYN+L++ L R+G V E + LL +M  + + P +I+YN I+   CK  
Sbjct: 614 QLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNG 673

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +N+++++L +M  KGC P+ ++Y  +I G+
Sbjct: 674 AVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 704



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 219/458 (47%), Gaps = 19/458 (4%)

Query: 57  LYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISG 115
           L+ +  M A+G KP+V   T  I+   Q R+ ++A R++  +E  G +PDV  +  LI  
Sbjct: 294 LWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQV 353

Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            C A +I  A  V  +++     PD VTY  ++      G  +S  ++++ +  D     
Sbjct: 354 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDN 413

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVR 218
           V+ YT +I A    G+  +A+++ DEM                 G  K    G A +  +
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 473

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G +P+  ++ + +      G+  +  +    M S+G+ P+VV  + ++  L + G
Sbjct: 474 YMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 533

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           +   A  V    K  G++PD  +Y  +I    K  + D A++    MI + C+PD++  N
Sbjct: 534 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVN 593

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           +++    K G  D+A +IF +L ++   P   +YNT+ + L   G     + ++ EM   
Sbjct: 594 SLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 653

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
              P+ ITYN+++ CLC++G V++A+ +L  M +    P + SYN +I G  K  R NE+
Sbjct: 654 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 713

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
             +   M +K   P+  T   ++      G   EA+ +
Sbjct: 714 FSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHI 750



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 21/452 (4%)

Query: 36  KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
           ++  +  LI    +A +F ++L   + M  +G KP+       I  + +  +S KA++  
Sbjct: 448 EQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 507

Query: 96  EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           E+++  G  PDV A NA++ G  K+ ++ +A +V   L++ G SPD +TY +MI      
Sbjct: 508 ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 567

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A K+F  ++ +NC P V+    LI      G+ D                  +A+
Sbjct: 568 SKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGD------------------EAW 609

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
           Q    L+    +P   +YN LL  L   GK +E   L+ EM      PN++TY+ ++  L
Sbjct: 610 QIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCL 669

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
           C++G   DA+D+L +   KG  PD  SY+ +I    K+ R + A      M     +PD 
Sbjct: 670 CKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDY 728

Query: 335 VNYNTILAAFCKNGNADQALEIF-EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
               TIL +F K G   +AL I  E     G   + SS +++   +       +++    
Sbjct: 729 ATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAE 788

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            + S GI  D+     LI  LC+     EA  L+   +S        SYN +I G     
Sbjct: 789 IIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDEN 848

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
            I+ +  + A M E GC P+E TY LL++ +G
Sbjct: 849 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 880



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 240/551 (43%), Gaps = 88/551 (15%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI-------------KKFFQER 86
            +  +IK   +A KFDE++     M+ N C PDV++   LI             + F+Q +
Sbjct: 557  YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616

Query: 87   KSN-------------------KAVRVMEILEKYGE----PDVFAYNALISGFCKANQIE 123
            + N                   K   VM +LE+       P++  YN ++   CK   + 
Sbjct: 617  EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 676

Query: 124  LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ----LLRDNCK-----P 174
             A  +L  + ++G  PD+ +YN +I  L        AF +F Q    L+ D        P
Sbjct: 677  DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILP 736

Query: 175  TVITYTILIQA---------------------TMLEG-----QTDKAMKL---------- 198
            + +   ++ +A                     +++EG      T+K+++           
Sbjct: 737  SFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGIT 796

Query: 199  LDEM-------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
            LD+         +CK+    +A + V+  +S G      SYN L+  L++    +  E L
Sbjct: 797  LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGL 856

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
              EM   G  P+  TY++L+ ++ +  + E+ + V      KG      +Y+ +IS   K
Sbjct: 857  FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 916

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
              RL+ AI+    ++S G  P    Y  +L    K G  + A  +F ++ + GC  N + 
Sbjct: 917  SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 976

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            YN + +    +G+  +   +  +M+ +GI PD  +Y  +I  LC+ G +++ +     + 
Sbjct: 977  YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 1036

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 491
                 P +I+YN++I G  K++R+ E++ +   M +KG  PN  TY  LI  +G  G  A
Sbjct: 1037 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1096

Query: 492  EAMELANALVS 502
            EA ++   L++
Sbjct: 1097 EAGKMYEELLT 1107



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 196/430 (45%), Gaps = 20/430 (4%)

Query: 49   RAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            + G   E+L+ I E  +  G K D   C  L++   ++  + K++   EI+   G   D 
Sbjct: 740  KIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDD 799

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            F    LI   CK  +   A++++ + +S G S    +YN +I  L    +I+ A  +F +
Sbjct: 800  FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAE 859

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
            +    C P   TY +L+ A     + ++ +K+ +EM                    +G +
Sbjct: 860  MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM------------------HRKGYE 901

Query: 227  PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
               ++YN ++  L+   + E+   L   ++S+G  P   TY  L+  L + G+ EDA ++
Sbjct: 902  STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 961

Query: 287  LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                 E G   +   Y+ L++ +   G  +        M+  G  PDI +Y  I+   CK
Sbjct: 962  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1021

Query: 347  NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             G  +  L  F +L ++G  P++ +YN +   L  S     A+ + +EM  KGI P+  T
Sbjct: 1022 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1081

Query: 407  YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            YNSLI  L + G   EA  +  ++ +  ++P V +YN +I G+  +   + +      M 
Sbjct: 1082 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1141

Query: 467  EKGCKPNETT 476
              GC PN +T
Sbjct: 1142 VGGCLPNSST 1151



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 215/494 (43%), Gaps = 55/494 (11%)

Query: 49   RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
            R GK  E ++ +E M  +   P+++    ++    +    N A+ ++  +   G  PD+ 
Sbjct: 636  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 695

Query: 108  AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ- 166
            +YN +I G  K  +   A  +  +++ +   PD  T   ++ S    G+++ A  +  + 
Sbjct: 696  SYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKEY 754

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKL----------LDEM-------GMCKKGM 209
             L+   K    +   L++  + +  T+K+++           LD+         +CK+  
Sbjct: 755  FLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 814

Query: 210  VGQAFQFVRSLES-----------------------------------RGCQPDVISYNM 234
              +A + V+  +S                                    GC PD  +YN+
Sbjct: 815  ALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 874

Query: 235  LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
            LL  +    + EE  K+  EM  +G E   VTY+ +IS L +  + E A+D+      +G
Sbjct: 875  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 934

Query: 295  LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
             +P   +Y PL+    K GR++ A    + M+  GC  +   YN +L      GN ++  
Sbjct: 935  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 994

Query: 355  EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
             +F+ + D G  P++ SY  +   L  +G     L    ++L  G+EPD ITYN LI  L
Sbjct: 995  HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1054

Query: 415  CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +   ++EAV L  +M+     P + +YN +IL   K  +  E+ ++   +  KG KPN 
Sbjct: 1055 GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNV 1114

Query: 475  TTYVLLIEGIGYGG 488
             TY  LI G    G
Sbjct: 1115 FTYNALIRGYSVSG 1128



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 53/427 (12%)

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           + + YN L+    K+     A +V   +   G  P V TY++++ +   R  +E+   + 
Sbjct: 238 NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 297

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++     KP V +YTI I+      + D+A ++L EM                  E+ G
Sbjct: 298 REMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEM------------------ENEG 339

Query: 225 CQPDVISYNMLLRTLLNMGK--------W----------------------EEGE----- 249
           C+PDVI++ +L++ L + G+        W                      + GE     
Sbjct: 340 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVM 399

Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
           ++   M + G   NVV Y+ +I +LC+ G+  +A+++    K+KG+ P+ YSY+ LIS +
Sbjct: 400 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 459

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
            K  R   A+E   YM   G  P+   +   +  + K+G + +A++ +E +   G  P+V
Sbjct: 460 LKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 519

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            + N +   L  SG    A  +  E+ + G+ PD ITY  +I C  +    DEAV +  D
Sbjct: 520 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 579

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           M      P V+  N +I    K  R +E+ ++   + E   +P + TY  L+ G+G  G 
Sbjct: 580 MIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGK 639

Query: 490 RAEAMEL 496
             E M L
Sbjct: 640 VKEVMHL 646



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/496 (22%), Positives = 203/496 (40%), Gaps = 92/496 (18%)

Query: 127 KVLDRLRSRGFSPDVV----TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           + L+R RS    P VV    + N M+  +   G +    +VFD + R   K  V T+  +
Sbjct: 151 EALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAI 210

Query: 183 IQATMLEG---QTDKAMKLLDEMG--------------MCKKGMVGQAFQ---------- 215
                +EG       A+ ++ E G              + K G   +A +          
Sbjct: 211 FGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGV 270

Query: 216 -------------------------FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                                     +R +E+ G +P+V SY + +R L    +++E  +
Sbjct: 271 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYR 330

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++ EM + G +P+V+T+++LI  LC  G+  DA DV    K+    PD  +Y  L+  + 
Sbjct: 331 ILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFA 390

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
            +G     +E  + M +DG   ++V Y  ++ A C+ G   +ALE+F+++   G  P   
Sbjct: 391 DNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQY 450

Query: 371 SYNTMFSALW-----------------------------------SSGDKIRALGMISEM 395
           SYN++ S                                       SG+ I+A+     M
Sbjct: 451 SYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELM 510

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
            SKGI PD +  N+++  L + G +  A  +  ++++    P  I+Y ++I    K  + 
Sbjct: 511 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 570

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRL 514
           +E++++   M E  C P+      LI+ +   G   EA ++   L  M+    D T+  L
Sbjct: 571 DEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTL 630

Query: 515 NRTFPLLDVYKEISHL 530
                     KE+ HL
Sbjct: 631 LAGLGREGKVKEVMHL 646



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 19/239 (7%)

Query: 32   SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
             F      +  L+    +AG+ +++      M+  GCK +  +   L+        + K 
Sbjct: 934  GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 993

Query: 92   VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
              + + +   G  PD+ +Y  +I   CKA Q+        +L   G  PD++TYN++I  
Sbjct: 994  CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1053

Query: 151  LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
            L     +E A  +F+++ +    P + TY  LI                  + + K G  
Sbjct: 1054 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLI------------------LHLGKAGKA 1095

Query: 211  GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
             +A +    L ++G +P+V +YN L+R     G  +        MI  G  PN  T  I
Sbjct: 1096 AEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 86/206 (41%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           DG  E       AA+   +     S + ++      GR+    E  D M       ++  
Sbjct: 147 DGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGT 206

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +  I       G    A      + + G   N  +YN +   L  SG    AL +   M+
Sbjct: 207 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMM 266

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ P   TY+ L+    +   V+  + LL +ME+   +P V SY I I    + RR +
Sbjct: 267 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFD 326

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIE 482
           E+  +LA M  +GCKP+  T+ +LI+
Sbjct: 327 EAYRILAEMENEGCKPDVITHTVLIQ 352


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 228/484 (47%), Gaps = 32/484 (6%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +  +    F  LI+    AG  ++++     M    CKPD+     ++    ++     A
Sbjct: 123 AIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLA 182

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + V  ++L+    PDV  Y  LI G CK  + + A  + D +  RG  P+ + Y+I++  
Sbjct: 183 LAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSG 242

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC    I  A ++F ++    C   +ITY +L+                   G CK G +
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN------------------GFCKSGYL 284

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF  ++ L   G    VI Y  L+  L    ++EE      +M+   ++P+V+ Y+I+
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  L ++G+  +A+ +L    E+GL PD   Y+ LI  +C  G LD A      +    C
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDC 404

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+   Y+ ++   CKNG  ++A  IF+++  +GC P+V ++N++ + L  +     A  
Sbjct: 405 FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARL 464

Query: 391 MISEM-----------LSKGIEP--DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +  +M           LS+G +   D  +   ++  LC  GM+ +A  LL+ +  +   P
Sbjct: 465 LFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLP 524

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            + +YNI+I GFCK   IN + ++   M  KG  P+  TY  LI+G+   G   +A+E+ 
Sbjct: 525 DIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIF 584

Query: 498 NALV 501
             +V
Sbjct: 585 EQMV 588



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 198/433 (45%), Gaps = 32/433 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +  K  ++L   + M   G  P+ ++ + ++    Q +K   A R+   +   G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D+  YN L++GFCK+  ++ A  +L  L   G    V+ Y  +I  L      E A 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
             + ++LR+N KP V+ YTI+I+    EG+  +A+ LL EM                   
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM------------------T 365

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +PD I YN L++   +MG  +E E L  E+      PN  TYSILI  +C++G   
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-----------ISDGC 330
            A  + +  ++ G  P   +++ LI+  CK  RL+ A      M           +S G 
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 331 --LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             + DI +   ++   C++G   +A ++  +L D G  P++ +YN + +     G+   A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM  KG  PD +TY +LI  L R G  ++A+ +   M      P   +Y  I+  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 449 FCKTRRINESIEV 461
            C+   I+ ++ V
Sbjct: 606 SCRENNISLALSV 618



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 190/410 (46%), Gaps = 26/410 (6%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + +I    K N  EL  KVL  L++         ++++I +    GM E A + F  L+R
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESF-SLMR 155

Query: 170 D-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           D +CKP +  + +++   + +     A+ + ++M  C                     PD
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC------------------NLNPD 197

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y +L+  L    K ++   L  EM  RG+ PN + YSI++S LC+  K  DA  +  
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  G   D  +Y+ L++ +CK G LD A   L  +  DG +  ++ Y  ++    +  
Sbjct: 258 KMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A   ++K+      P+V  Y  M   L   G    AL ++ EM  +G+ PD I YN
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C  G +DEA  L +++      P   +Y+I+I G CK   IN++  +   M + 
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR--DTFKRLNR 516
           GC P+  T+  LI G+     +A  +E A  L     I R    F RL++
Sbjct: 438 GCLPSVVTFNSLINGLC----KANRLEEARLLFYQMEIVRKPSLFLRLSQ 483



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 6/318 (1%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   FRA +++E+  + + M+    KPDV++ T +I+   QE +  +A+ ++ E+ E+ 
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD   YNALI GFC    ++ A  +   +      P+  TY+I+I  +C  G+I  A 
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++ +  C P+V+T+  LI       + ++A  L  +M + +K  +     F+R  +
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL-----FLRLSQ 483

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                 D+ S  +++  L   G   +  KL+ +++  G+ P++ TY+ILI+  C+ G   
Sbjct: 484 GTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNIN 543

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  + +  + KG  PD+ +Y  LI    + GR + A+E  + M+  GC+P+   Y TI+
Sbjct: 544 GAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603

Query: 342 AAFCKNGNADQALEIFEK 359
              C+  N   AL ++ K
Sbjct: 604 TWSCRENNISLALSVWMK 621



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD+   Q M  ++R   +G   ++   +  +V +G  PD+     LI  F +    N A 
Sbjct: 489 FDIASLQVM--MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAF 546

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++ + ++  G  PD   Y  LI G  +A + E A ++ +++  +G  P+  TY  ++   
Sbjct: 547 KLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWS 606

Query: 152 CSRGMIESAFKVFDQLLRD 170
           C    I  A  V+ + LRD
Sbjct: 607 CRENNISLALSVWMKYLRD 625


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 226/468 (48%), Gaps = 18/468 (3%)

Query: 23  ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
           + RPN   LS          L+    R G+ D ++     M + G   D+ M + LI+  
Sbjct: 272 DMRPNEKTLSV---------LVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGL 322

Query: 83  FQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD- 140
               +  KAV++ E +++    PDV     +I  FC+          ++   +    P  
Sbjct: 323 CHGNEMGKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINE-NAVHLKPGS 381

Query: 141 -VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT---VITYTILIQATMLEGQTDKAM 196
            V+ YN+++  L + G +E+A+++   ++R + + +    +   I +    ++  +D   
Sbjct: 382 AVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFN 441

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
            ++   G+CK   +  A    + +   GC+  ++ +N L+  L N GK +E  ++  +M 
Sbjct: 442 IVV--CGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMK 499

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             GL+P+  TY+ L+  +CR   T  A D+LR  +     P   +   ++   C  GR+ 
Sbjct: 500 DLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRIT 559

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A++FLD M+  G LPDIV Y+  +   CK G+ + AL +F  +S     P+V ++N + 
Sbjct: 560 EALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILI 619

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           +    +G    A  ++ EMLSKG+ P  +TYN +I   C+ G +D+A+  +  M      
Sbjct: 620 NGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKP 679

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           PTV++Y  ++ G C   R +E+I +   M EKGC PN   Y  L+ G+
Sbjct: 680 PTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGL 727



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 21/387 (5%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQ--FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVM 74
           RVS       +  +++ DVK     F  ++    +  K D +L   + MV  GCK  ++M
Sbjct: 415 RVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLM 474

Query: 75  CTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLR 133
              LI +     K ++A  +   ++  G +P  F YN+L+ G C+      A  +L  +R
Sbjct: 475 FNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMR 534

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           +    P +     M+  LC  G I  A +  D +L     P ++TY+  +          
Sbjct: 535 ANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMN--------- 585

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    GMCK G +  A      + S+   PDV+++N+L+      GK++E +++M 
Sbjct: 586 ---------GMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIME 636

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM+S+G+ P+VVTY+++I   C+ G  + A+  +    ++   P   +Y  L+   C  G
Sbjct: 637 EMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAG 696

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R D AI     M   GC P+ + Y  ++   CK G  + A+  +E++   G   ++ S  
Sbjct: 697 RPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLDIFSLL 756

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGI 400
            + + L + G   +   ++  +L K +
Sbjct: 757 NLTNLLIAQGQASKGCELLKVVLQKDV 783



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 17/342 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +P+  ++N ++ G CK  +++LA  +   +   G    ++ +N +I  LC+ G ++ A++
Sbjct: 434 KPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYE 493

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
           +F+Q+     KP+  TY  L+        T  A  LL EM                  +C
Sbjct: 494 IFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLC 553

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G + +A QF+  +   G  PD+++Y+  +  +  +G  E    L  ++ S+   P+VV
Sbjct: 554 LSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVV 613

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
            ++ILI+   + GK ++A +++     KG+ P   +Y+ +I  +CK G +D AI  +  M
Sbjct: 614 AHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKM 673

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           I +   P +V Y ++L   C  G  D+A+ ++ K+ + GC PN  +Y  + + L   G  
Sbjct: 674 IDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRM 733

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
             A+    EM +KG + D  +  +L + L   G   +   LL
Sbjct: 734 ETAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQGQASKGCELL 775



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 46/420 (10%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           ++ NA+ S      +  L     D L SR   +P  + +  ++  L + G+ ++A +VFD
Sbjct: 102 YSLNAMASLLPPHQRAHLDRLATDALVSRCSMTPGALGF--LLRRLGAAGLPDTAARVFD 159

Query: 166 QLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM-------------------C 205
                 +C P   TY  L+ A    G+ + A   L EM +                   C
Sbjct: 160 AAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTCGDESVDRYTLTSLLQCYC 219

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
             G    A   ++ +  R    + +   ML+      GK E+  +L+  M +  + PN  
Sbjct: 220 NAGRPEDASAVLQRMSKRAWVDEHV-LTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEK 278

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T S+L+  L R G+ + A+++       G + D   Y  LI   C    +  A++  + M
Sbjct: 279 TLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDM 338

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN--VSSYNTMFSALWSSG 383
             D   PD+     I+ AFC+ G+    +  F   + V   P   V  YN +   L + G
Sbjct: 339 KRDRITPDVRLLKKIIEAFCRQGDF-STVGPFINENAVHLKPGSAVLLYNVILDGLINHG 397

Query: 384 DKIRALGMISEM-------------------LSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           +   A  ++S M                   +++ ++P+  ++N ++  LC+   +D A+
Sbjct: 398 EVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLAL 457

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            L  DM     +  ++ +N +IL  C + +++E+ E+   M + G KP+E TY  L+ GI
Sbjct: 458 ALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGI 517



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 41/253 (16%)

Query: 283 AVDVLR-AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL-PDIVNYNTI 340
           A+D  R AA++ G     YS + + S      R  L     D ++S   + P  + +  +
Sbjct: 84  ALDFFRWAAEQPGFRHSCYSLNAMASLLPPHQRAHLDRLATDALVSRCSMTPGALGF--L 141

Query: 341 LAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SK 398
           L      G  D A  +F+   + + C PN  +YN +  AL  +G    A   + EM+ + 
Sbjct: 142 LRRLGAAGLPDTAARVFDAAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTC 201

Query: 399 GIEP-DEITYNSLISCLC----------------------------------RDGMVDEA 423
           G E  D  T  SL+ C C                                  + G V++A
Sbjct: 202 GDESVDRYTLTSLLQCYCNAGRPEDASAVLQRMSKRAWVDEHVLTMLIVAYSKWGKVEDA 261

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V LL  ME+   RP   + ++++ G  +  R++ ++ +   M   G   +   Y +LIEG
Sbjct: 262 VELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEG 321

Query: 484 IGYGGWRAEAMEL 496
           + +G    +A++L
Sbjct: 322 LCHGNEMGKAVKL 334


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 194/388 (50%), Gaps = 17/388 (4%)

Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
           F +N ++    K+        +  ++   G +P+ VT+NI+I   C  G+I  AF V  +
Sbjct: 69  FEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAK 128

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +L+   +P +IT    I+   L+GQ  +A+   D++                 G+CK G 
Sbjct: 129 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 188

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
              A Q +R ++ +  Q + + YN ++  +       +   L +EM+++ + P+VVTYS 
Sbjct: 189 TRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSA 248

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI      GK +DA+D+      + + PD Y+++ L+  +CK+GRL  A   LD M+   
Sbjct: 249 LIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P++  +NT++  FCK+    +   +F  +   G  PNV +Y ++           +A 
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAK 368

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            + + M  +G+  +  +YN +I+  C+   VD+A+ L ++M      P V++YN +I G 
Sbjct: 369 KIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGL 428

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTY 477
           CK+ +I+ + +++  M ++G  PN  TY
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITY 456



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 215/463 (46%), Gaps = 30/463 (6%)

Query: 44  IKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG- 102
           I  +F +   D ++    S++            K++    + +  +  + + + +E  G 
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+   +N LI+ FC+   I  A  VL ++   G+ PD++T N  I   C +G I  A  
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
             D+L+        ++Y  LI      G+T  A++LL  +                 GM 
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K   V  AF     + ++   PDV++Y+ L+R    +GK ++   L  +MI   ++P+V 
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++IL+   C++G+ + A +VL     + + P+  +++ L+  +CKD ++         M
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
           +  G  P++V Y +++  +C     ++A +IF  +S  G   NV SYN M +        
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
            +A+ +  EM  K I PD +TYNSLI  LC+ G +  A  L+ +M      P +I+YN I
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSI 459

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           +              +L  + ++G +PN  T  +LI+G+   G
Sbjct: 460 LNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSG 490



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 201/445 (45%), Gaps = 65/445 (14%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           +F K++    ++  +   L   + M   G  P+ V    LI  F Q      A  V+  +
Sbjct: 70  EFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKI 129

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG-- 155
            K G EPD+   N  I GFC   QI  A    D+L + GF  D V+Y  +I  LC  G  
Sbjct: 130 LKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 189

Query: 156 ---------------------------------MIESAFKVFDQLLRDNCKPTVITYTIL 182
                                             +  AF ++ +++     P V+TY+ L
Sbjct: 190 RAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSAL 249

Query: 183 IQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGC 225
           I+   + G+   A+ L ++M                 G CK+G + +A   +  +  +  
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI 309

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD 285
           +P+V ++N L+       K +EG+ +   M+ +G++PNVVTY  L+   C   +   A  
Sbjct: 310 KPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKK 369

Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC 345
           +     ++G+T + +SY+ +I+ +CK  ++D A++    M     +PD+V YN+++   C
Sbjct: 370 IFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLC 429

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           K+G    A ++  ++ D G PPN+ +YN++ +AL            ++++  +GI+P+  
Sbjct: 430 KSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL------------LTKLKDQGIQPNMH 477

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDM 430
           T   LI  LC+ G ++ A  +  D+
Sbjct: 478 TDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 166/369 (44%), Gaps = 31/369 (8%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           L F + +  +  LI    + G+   +L  +  +     + + VM   +I    +++  N 
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 91  AVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  +  E++ K   PDV  Y+ALI GF    +++ A  + +++      PDV T+NI++ 
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
             C  G ++ A  V D ++  + KP V T+  L+                   G CK   
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVD------------------GFCKDRK 328

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
           + +       +  +G +P+V++Y  L+     + +  + +K+   M  RG+  NV +Y+I
Sbjct: 329 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 388

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           +I+  C+  K + A+ +      K + PD  +Y+ LI   CK G++  A + ++ M   G
Sbjct: 389 MINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRG 448

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             P+I+ YN+IL A            +  KL D G  PN+ +   +   L  SG    A 
Sbjct: 449 QPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAAR 496

Query: 390 GMISEMLSK 398
            +  ++L K
Sbjct: 497 KVFEDLLVK 505



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 113/242 (46%), Gaps = 1/242 (0%)

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+ N + YS  IS+       + AV +  +   +  T  A+ ++ ++ +  K       +
Sbjct: 30  LQKNFIPYSS-ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
                M  +G  P+ V +N ++  FC+ G    A  +  K+  +G  P++ + NT     
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G   +AL    ++++ G   D+++Y +LI+ LC+ G    A+ LL  ++    +   
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
           + YN +I G  K + +N++ ++ + M  K   P+  TY  LI G    G   +A++L N 
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 500 LV 501
           ++
Sbjct: 269 MI 270



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 3/230 (1%)

Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
           IS       +D A+   + ++          +N IL +  K+ +    L + +++   G 
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            PN  ++N + +     G    A  +++++L  G EPD IT N+ I   C  G + +A+ 
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
               + +  F    +SY  +I G CK      ++++L  +  K  + N   Y  +I+G+ 
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 486 YGGWRAEAMELANALVSMHAISRD--TFKRLNRTFPLLDVYKEISHLATK 533
                 +A +L + +V+   IS D  T+  L R F ++   K+   L  K
Sbjct: 220 KDKHVNDAFDLYSEMVA-KRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 206/424 (48%), Gaps = 22/424 (5%)

Query: 86  RKSNKAVRVMEILEKYGEPDVFAYNALI----SGFCKANQIELANKVLDRLRSRGFSPDV 141
           +K + A+RV E +    E ++    ++I    S   K  ++  A  +L  L   GF  DV
Sbjct: 141 KKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDV 200

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLD 200
             Y  MI +  S G    A  VF ++    CKPT+ITY +++      G   +K + L+D
Sbjct: 201 YAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVD 260

Query: 201 EM----------------GMCKKG-MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
            M                  C++G +  +A   ++ ++  G  PD ++YN LL       
Sbjct: 261 RMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSR 320

Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
           + +E  +++ EM   G  P++VTY+ LIS+  RDG  EDA+++     EKG+ PD ++Y 
Sbjct: 321 RSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYT 380

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            L+S + K G+   A++  + M ++GC P+I  +N ++      G   + +++FE +   
Sbjct: 381 TLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTF 440

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
            C P++ ++NT+ S    +G      G+  EM   G  P+  T+N+LIS   R G  D+A
Sbjct: 441 QCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQA 500

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           + +   M      P + SYN ++    +     +S +VLA M +  CKPNE TY  L+  
Sbjct: 501 MAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHA 560

Query: 484 IGYG 487
              G
Sbjct: 561 YANG 564



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 243/520 (46%), Gaps = 56/520 (10%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           RVS++A    N     FDV    +  +I      G++ E++   + M   GCKP ++   
Sbjct: 180 RVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYN 239

Query: 77  KLIKKFFQ-ERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
            ++  + +     NK V +++ ++  G  PD + YN LIS   + N  E A  VL  ++ 
Sbjct: 240 VILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            GFSPD VTYN ++         + A +V  ++  + C P+++TY  LI A   +G  + 
Sbjct: 300 AGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLED 359

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A++L ++M                 G  K G    A Q    + + GC+P++ ++N L++
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
              N GK+ E  K+  ++ +    P++VT++ L+S   ++G   +   V +  K  G  P
Sbjct: 420 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 479

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           +  +++ LIS+Y + G  D A+     M+  G  PD+ +YN +LAA  + G   Q+ ++ 
Sbjct: 480 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 539

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL---------GMIS--------------- 393
            ++ D  C PN  +Y ++  A +++G +I  +         G+I                
Sbjct: 540 AEMKDGRCKPNELTYCSLLHA-YANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSK 598

Query: 394 ------------EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
                       E+  +G  PD  T N+++S   R  MV +A  +L  M+   F P++ +
Sbjct: 599 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 658

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           YN ++  + ++     S E+L  +  KG +P+  +Y  +I
Sbjct: 659 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVI 698



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 239/509 (46%), Gaps = 27/509 (5%)

Query: 30  LLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
           L  F   +  +  L+    ++ +  E++  ++ M  NGC P +V    LI  + ++    
Sbjct: 299 LAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLE 358

Query: 90  KAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
            A+ +  +++EK  +PDVF Y  L+SGF KA + + A ++ + +R+ G  P++ T+N +I
Sbjct: 359 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 418

Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
               +RG      KVF+ +    C P ++T+  L+      G   +   +  EM      
Sbjct: 419 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 478

Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                         + G   QA    + +   G  PD+ SYN +L  L   G W++ EK+
Sbjct: 479 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 538

Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
           + EM     +PN +TY  L+ +     + E    +        + P A     L+     
Sbjct: 539 LAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLV--- 595

Query: 312 DGRLDLAIE----FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
           + + DL +E    FL+ +   G  PDI   N +++ + +     +A EI + +   G  P
Sbjct: 596 NSKCDLLMETERAFLE-LRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTP 654

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
           ++++YN++      S +  R+  ++ E+L+KGI PD I+YN++I   CR+G + +A  +L
Sbjct: 655 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 714

Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
            +M  +   P +I+YN  I  +       E+I+V+  M + GCKPN++TY  +++     
Sbjct: 715 SEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKL 774

Query: 488 GWRAEAMELANALVSMHA-ISRDTFKRLN 515
             R EA    N L  +   IS D   RL+
Sbjct: 775 NRRDEASMFVNNLRKLDPHISMDEECRLS 803


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 220/452 (48%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AG + E+L  ++ M  +GC+PD V   +L   + +     +A + ++ +   G  P+ F
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 357

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++ +    +++ A  + DR++  G+ P+V TYN++ G L  +    +  ++ +++
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
            R  C P  +T+  ++      G  D   ++L+ M  C                 + G  
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+    + S G  P + +YN LL  L   G W   + ++++M+  G +PN  +YS+L
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +    + G       + +      + P       L+ A  K  RL+   +    + + G 
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 597

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V +N++LA + KNG   +A E+F+ +   G  P++ +YN++      S +   A  
Sbjct: 598 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 657

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ ++ S  ++PD ++YN++I+  C+ G++ EA  +L +M +    P V++Y+ ++ G+ 
Sbjct: 658 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 717

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                NE+ EV+  M     KP E TY  +++
Sbjct: 718 SLEMFNEAREVVNYMIHHNLKPMELTYRRVVD 749



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 20/472 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  D+++ F E + A G  P VV    L++ F +     +A+RV++ +E  G +PD  
Sbjct: 263 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L   + +A   E A K LD + S+G  P+  TYN ++ +  + G ++ A  +FD++
Sbjct: 323 TYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMV 210
            ++   P V TY ++      + +    +++L+EM                 +C K+GM 
Sbjct: 383 KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGME 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +  ++S G +    +YN L+      G      K+  EMIS G  P + TY+ L
Sbjct: 443 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ L R G    A  ++    + G  P+  SY  L+  Y K G     IE ++  +  G 
Sbjct: 503 LNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGT 561

Query: 331 L-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           + P  V   T++ A  K    +   + F+++   G  P++  +N+M +    +G   +A 
Sbjct: 562 IFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKAT 621

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            M   +   G+ PD ITYNSL+    +     EA  +L  ++S++ +P V+SYN +I GF
Sbjct: 622 EMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGF 681

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK   I E+  +L+ M   G  P   TY  L+ G        EA E+ N ++
Sbjct: 682 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMI 733



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 19/406 (4%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  D  A   ++    +  Q ++   +LD +    G   DV  Y  ++ +L   G  E A
Sbjct: 140 GAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERA 199

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM----------------G 203
            ++F +L R    PT++TY +++      G++  + + LL+EM                 
Sbjct: 200 LQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 259

Query: 204 MC-KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            C + G++ QA  F   L++RG  P V++YN LL+     G + E  +++ EM   G +P
Sbjct: 260 ACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQP 319

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + VTY+ L  +  R G  E+A   L     KGL P+ ++Y+ +++AY   GR+D A+   
Sbjct: 320 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 379

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M  +G +P++  YN I     K       LE+ E++S  GC PN  ++NTM +     
Sbjct: 380 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKR 439

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G +     +++ M S G+E    TYN+LIS   R G    A  +  +M S+ F P + +Y
Sbjct: 440 GMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTY 499

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           N ++    +    + +  +++ M + G KPN+ +Y LL++    GG
Sbjct: 500 NALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 220/452 (48%), Gaps = 18/452 (3%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
           +AG + E+L  ++ M  +GC+PD V   +L   + +     +A + ++ +   G  P+ F
Sbjct: 298 KAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTF 357

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN +++ +    +++ A  + DR++  G+ P+V TYN++ G L  +    +  ++ +++
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC-----------------KKGMV 210
            R  C P  +T+  ++      G  D   ++L+ M  C                 + G  
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF+    + S G  P + +YN LL  L   G W   + ++++M+  G +PN  +YS+L
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           +    + G       + +      + P       L+ A  K  RL+   +    + + G 
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 597

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD+V +N++LA + KNG   +A E+F+ +   G  P++ +YN++      S +   A  
Sbjct: 598 KPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEK 657

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ ++ S  ++PD ++YN++I+  C+ G++ EA  +L +M +    P V++Y+ ++ G+ 
Sbjct: 658 ILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYA 717

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
                NE+ EV+  M     KP E TY  +++
Sbjct: 718 SLEMFNEAREVVNYMIHHNLKPMELTYRRVVD 749



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 20/472 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  D+++ F E + A G  P VV    L++ F +     +A+RV++ +E  G +PD  
Sbjct: 263 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 322

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN L   + +A   E A K LD + S+G  P+  TYN ++ +  + G ++ A  +FD++
Sbjct: 323 TYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM 382

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMC-KKGMV 210
            ++   P V TY ++      + +    +++L+EM                 +C K+GM 
Sbjct: 383 KKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGME 442

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
               + +  ++S G +    +YN L+      G      K+  EMIS G  P + TY+ L
Sbjct: 443 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 502

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           ++ L R G    A  ++    + G  P+  SY  L+  Y K G     IE ++  +  G 
Sbjct: 503 LNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNA-AGIESIEKEVYVGT 561

Query: 331 L-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
           + P  V   T++ A  K    +   + F+++   G  P++  +N+M +    +G   +A 
Sbjct: 562 IFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKAT 621

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
            M   +   G+ PD ITYNSL+    +     EA  +L  ++S++ +P V+SYN +I GF
Sbjct: 622 EMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGF 681

Query: 450 CKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
           CK   I E+  +L+ M   G  P   TY  L+ G        EA E+ N ++
Sbjct: 682 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMI 733



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 19/406 (4%)

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLR-SRGFSPDVVTYNIMIGSLCSRGMIESA 160
           G  D  A   ++    +  Q ++   +LD +    G   DV  Y  ++ +L   G  E A
Sbjct: 140 GAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERA 199

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQT-DKAMKLLDEM----------------G 203
            ++F +L R    PT++TY +++      G++  + + LL+EM                 
Sbjct: 200 LQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIA 259

Query: 204 MC-KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            C + G++ QA  F   L++RG  P V++YN LL+     G + E  +++ EM   G +P
Sbjct: 260 ACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQP 319

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           + VTY+ L  +  R G  E+A   L     KGL P+ ++Y+ +++AY   GR+D A+   
Sbjct: 320 DAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALF 379

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           D M  +G +P++  YN I     K       LE+ E++S  GC PN  ++NTM +     
Sbjct: 380 DRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKR 439

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G +     +++ M S G+E    TYN+LIS   R G    A  +  +M S+ F P + +Y
Sbjct: 440 GMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTY 499

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           N ++    +    + +  +++ M + G KPN+ +Y LL++    GG
Sbjct: 500 NALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 213/421 (50%), Gaps = 18/421 (4%)

Query: 67  GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
           G  PD V  T LIK      K  +A+   + ++ K    D  +Y  LI+G CK  +   A
Sbjct: 129 GFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAA 188

Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
            +VL ++      P+VV YN +I SLC   ++  A  +  +++     P V+TYT LI  
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
            ++ G+  +A+ L ++M                 G+CK+G + +A   +  +  +G   +
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN 308

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN L+     + +  +   +   M  RG+ P+V +YSI+I+ LC+    ++AV++ +
Sbjct: 309 IVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFK 368

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               K + P+  +Y+ LI    K GR+  A + ++ M + G   D++ Y+++L A CKN 
Sbjct: 369 EMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNH 428

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             D+A+ +  K+ D G  PN+ +Y  +   L  +G    A  +  ++L KG   D   YN
Sbjct: 429 QVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYN 488

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +++ LC++G+ DEA+ L+  ME     P  ++Y  ++    +  + ++++++L  M  +
Sbjct: 489 VMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQ 548

Query: 469 G 469
           G
Sbjct: 549 G 549



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 206/415 (49%), Gaps = 17/415 (4%)

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
           +PD+F +N LI+ FC    +  A  VL ++   GF PD VT   +I  LC  G +  A  
Sbjct: 96  QPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALH 155

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMC 205
             D ++        ++Y  LI      G+T  A+++L ++                  +C
Sbjct: 156 FHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLC 215

Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
           K  +V  A      +  +   PDV++Y  L+   L +G+ +E   L  +M+ + ++P+V 
Sbjct: 216 KDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVY 275

Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
           T++IL+  LC++G+ + A +VL    ++G+  +  +Y+ L+  Y    + + A    + M
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM 335

Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
              G  PD+ +Y+ ++   CK    D+A+ +F+++      PN  +YN++   L   G  
Sbjct: 336 ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRI 395

Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
             A  +++EM ++G   D ITY+SL+  LC++  VD+A+ L+  ++    +P + +Y I+
Sbjct: 396 SDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTIL 455

Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + G CK  R+ ++  V   +  KG   +   Y +++ G+   G   EA+ L + +
Sbjct: 456 VDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 205/413 (49%), Gaps = 17/413 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFD 165
           +F +N ++S   K N    A     ++  +   PD+ T+NI+I   C  G +  AF V  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 166 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKG 208
           ++ +    P  +T T LI+   L G+  +A+   D++                 G+CK G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
               A Q +R ++    QP+V+ YN ++ +L           L +EMI + + P+VVTY+
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
            LI      G+ ++AV +      K + PD Y+++ L+   CK+G +  A   L  MI  
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G   +IV YN+++  +      ++A  +F  ++  G  P+V SY+ M + L  +     A
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           + +  EM SK + P+ +TYNSLI  L + G + +A  L+ +M +      VI+Y+ ++  
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            CK  +++++I ++  + ++G +PN  TY +L++G+   G   +A  +   L+
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 133/268 (49%)

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F   L  R     +  +N +L +L+ +  +        +M  + ++P++ T++ILI+  C
Sbjct: 51  FNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFC 110

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G    A  VL    + G  PD  +   LI   C +G++  A+ F D +I+ G   D V
Sbjct: 111 HLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQV 170

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
           +Y T++   CK G    AL++  K+  +   PNV  YNT+  +L      I A  + SEM
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
           + K I PD +TY +LI      G + EAVGL   M     +P V ++NI++ G CK   +
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEG 483
            ++  VLA M ++G   N  TY  L++G
Sbjct: 291 KKARNVLAVMIKQGVDSNIVTYNSLMDG 318



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 1/161 (0%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+  ++   +  M   G   DV+  + L+    +  + +KA+ ++  ++  G
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+++ Y  L+ G CK  +++ A  V   L  +G+  DV  YN+M+  LC  G+ + A 
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEAL 504

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            +  ++  + C P  +TY  L++A     + DKA+KLL EM
Sbjct: 505 SLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 49/96 (51%)

Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
           +N ++S L +      A+     ME  + +P + ++NI+I  FC    +N +  VLA +F
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           + G  P+  T   LI+G+   G   EA+   + +++
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIA 162


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 17/460 (3%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  LI     +G+ D +    E M ++G +  VV  T +I   F+  + ++A+ 
Sbjct: 70  DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKAHRPDQAIA 128

Query: 94  VME-ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
             E ++ +  +PD+  +  +I+G CKA ++  A +V   +  +G+ PD++ Y  ++  L 
Sbjct: 129 CFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLS 188

Query: 153 SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-MCK----- 206
              M++ A K+  +++    KPT +TYT  I      G+ ++A KL+ EMG MC      
Sbjct: 189 KASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLH 248

Query: 207 --------KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                   +G + +A      +  +G   DV  Y  L+  L  + + +E +++   M+ +
Sbjct: 249 CIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQ 308

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G  P+  TY +++S  C+ GK + A  V+      GL  + + Y+ L+  +    R   A
Sbjct: 309 GCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREA 368

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGN-ADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           I     M+     P IV YN ++   CK G  AD  L + E     G  P + SY T+  
Sbjct: 369 INVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIH 428

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L  +G    A+ + +EM+  G+ PD  +  SLI  L     +DEA  LL DM      P
Sbjct: 429 GLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITP 488

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
             ++YN ++   C   ++  + +VL  M +  C P+ +T+
Sbjct: 489 DALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTF 528



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 222/480 (46%), Gaps = 52/480 (10%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
           AG+F  +   ++ M A G K   V    ++K   + ++ ++A+     +    + DV +Y
Sbjct: 17  AGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVSPRSDLDVVSY 76

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI G   + +I++A ++ + + S G S  VV Y  +I +L      + A   F++++ 
Sbjct: 77  TTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRPDQAIACFERMVA 135

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
             C P + T+T++I                   G+CK G + +A +  + +  +G +PD+
Sbjct: 136 RKCDPDLRTFTVVIT------------------GLCKAGKLNRACEVFQEMNRKGWKPDI 177

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR- 288
           I Y  L+  L      +E  KL+ E++SRG++P  VTY+  IS LC++G+ E+A  ++R 
Sbjct: 178 IVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVRE 237

Query: 289 -----AAK--------------------------EKGLTPDAYSYDPLISAYCKDGRLDL 317
                AA+                          +KG+T D   Y  LI       R D 
Sbjct: 238 MGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDE 297

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A E  + M+  GC+PD   Y  I++ FCK G    A ++ E +   G   N   YN++  
Sbjct: 298 AQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMD 357

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFR 436
                     A+ + S ML K ++P  +TYN L+  LC+ G   +A  +L +M E     
Sbjct: 358 GFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIV 417

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           PT++SY  +I G  K  R +E+I+V   M + G  P+  +   LI+ +       EA +L
Sbjct: 418 PTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQL 477



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 207/431 (48%), Gaps = 26/431 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  +I   F+A + D+++   E MVA  C PD+   T +I    +  K N+A  V + + 
Sbjct: 110 YTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMN 169

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           + G +PD+  Y +L+ G  KA+ ++ A K+L  + SRG  P  VTY   I  LC  G +E
Sbjct: 170 RKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVE 229

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV-------- 210
            A K+  ++ +  C   V+    +    +LEG+ ++A+ L DEM   KKG+         
Sbjct: 230 EAGKLVREMGK-MCAAEVLH--CIFGGYVLEGKIEEALTLKDEM--VKKGVTLDVRCYTN 284

Query: 211 -----------GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                       +A +   ++  +GC PD  +Y M++      GK +   K++  M + G
Sbjct: 285 LIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAG 344

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL-DLA 318
           LE N   Y+ L+       +  +A++V      K + P   +Y+ L+   CK G+  D  
Sbjct: 345 LEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADAR 404

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           +   +    DG +P IV+Y T++    K G AD+A+++F ++ D G  P+  S  ++  A
Sbjct: 405 LVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQA 464

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +     A  ++ +M   GI PD + YN+L+  LC    V  A  +LV+M      P 
Sbjct: 465 LAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPD 524

Query: 439 VISYNIIILGF 449
             ++  + LGF
Sbjct: 525 GSTFRAMKLGF 535



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 167/362 (46%), Gaps = 42/362 (11%)

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C  G   +A++ ++ +E+ G +   +++ ++L+ L    + ++       +  R  + 
Sbjct: 13  GLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVSPRS-DL 71

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +VV+Y+ LI  L   G+ + A ++       G +    +Y  +I+A  K  R D AI   
Sbjct: 72  DVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRPDQAIACF 130

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           + M++  C PD+  +  ++   CK G  ++A E+F++++  G  P++  Y ++   L  +
Sbjct: 131 ERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKA 190

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM------------ 430
                A  ++ E++S+G++P E+TY S IS LC++G V+EA  L+ +M            
Sbjct: 191 SMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCI 250

Query: 431 -----------ESTRFRPTVIS---------YNIIILGFCKTRRINESIEVLAAMFEKGC 470
                      E+   +  ++          Y  +I G    RR +E+ E+  AM  +GC
Sbjct: 251 FGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGC 310

Query: 471 KPNETTYVLLIEGIGYGGWR------AEAMELANALVSMHAISR--DTFKRLNRTFPLLD 522
            P+  TY +++      G         E M+ A    + H  +   D F  +NR    ++
Sbjct: 311 VPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAIN 370

Query: 523 VY 524
           VY
Sbjct: 371 VY 372



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +V +Y+I+I  LC  G+   A ++L+  +  G+     ++  ++ A C+   +D A+ + 
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
            + +S     D+V+Y T++     +G  D A E+FE++S  G    V +Y  + +AL+ +
Sbjct: 63  -HSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKA 120

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
               +A+     M+++  +PD  T+  +I+ LC+ G ++ A  +  +M    ++P +I Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             ++ G  K   ++E+ ++L  +  +G KP E TY   I G+   G   EA +L   +  
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGK 240

Query: 503 MHA 505
           M A
Sbjct: 241 MCA 243


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G+ +E    IE+    GC P  V    LI  + +     + + ++  +E  G  P V  Y
Sbjct: 290 GRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTY 349

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
            A+I    + + +     +L  ++ RG SP+V  YN +I +LC       A  V +Q++ 
Sbjct: 350 GAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVA 409

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMVGQ 212
               P V+T+  LI A   EG  ++A+KLL E                  G C +G V  
Sbjct: 410 SRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMV 469

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A   +  +  RG  PDV++   L+  L+  G+ +E   +  +M  R + P+   Y++LIS
Sbjct: 470 ASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLIS 529

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+      A ++L    E+ + PD + Y  LI  + +  +L  A +  ++M   G   
Sbjct: 530 GLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYR 589

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           DIV YN ++  +CK+G  ++A+     +  VGC P+  +Y T+       GD   AL  +
Sbjct: 590 DIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFL 649

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M+ +  +P+ +TY SLI   C  G  D A  L   M+S    P V+ Y ++I    K 
Sbjct: 650 CDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKK 709

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +  ++      M    C PN+ T   L+ G+
Sbjct: 710 DKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 212/457 (46%), Gaps = 38/457 (8%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALI 113
           ++L  +  MVA+   PDVV    LI  F +E    +A++++ E + +  EP+  +Y  LI
Sbjct: 399 QALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLI 458

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
            GFC   ++ +A+ +L  +  RG +PDVVT   +I  L   G ++ A  V +++      
Sbjct: 459 HGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P    Y +LI                   G+CKK M+  A   +  +  +  QPD   Y 
Sbjct: 519 PDANIYNVLIS------------------GLCKKRMLSAAKNLLVEMLEQKVQPDKFVYT 560

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            L+   +   K  +  K+   M  +G   ++V Y+ +I   C+ G   +AV  + + ++ 
Sbjct: 561 TLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKV 620

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G  PD ++Y  LI  Y K G +  A+ FL  M+   C P+IV Y +++  +C  GN D A
Sbjct: 621 GCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSA 680

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
             +F  +   G  PNV  Y  +  +L+     I+A      ML     P++ T + L++ 
Sbjct: 681 EVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNG 740

Query: 414 L--CRDGMV-------DEA------VGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           L  CR GM+       D+A      + +   + S    P + +YN II   C+   + ++
Sbjct: 741 LTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKA 800

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIG----YGGWRA 491
           +E+   M  KGC P+  T++ L+ G       G WR+
Sbjct: 801 MELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRS 837



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 206/426 (48%), Gaps = 21/426 (4%)

Query: 66  NGCKPDVVMCTKLIKKFFQERKSNKAVRV---MEILEKYGEPDVFAYNALISGFCKANQI 122
           +G  PD   C +L++     R+   A R+   M   ++ G  D ++   ++ G C   ++
Sbjct: 233 HGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRV 292

Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
           E   ++++     G  P  V YN++I   C RG +     +  ++      PTV+TY  +
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352

Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
           I     +    K   LL EM                  + RG  P+V  YN ++  L   
Sbjct: 353 IHWLGRKSDLTKIESLLWEM------------------KERGLSPNVQIYNTVIYALCKC 394

Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
               +   ++ +M++   +P+VVT++ LI++ CR+G  E+A+ +LR A  + L P+  SY
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454

Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
            PLI  +C  G + +A + L  MI  G  PD+V    ++     +G  D+AL + EK+++
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
               P+ + YN + S L        A  ++ EML + ++PD+  Y +LI    R   + +
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A  +   ME       +++YN +I G+CK+  +NE++  +++M + GC P+E TY  LI+
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 483 GIGYGG 488
           G    G
Sbjct: 635 GYAKKG 640



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 37/366 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI     +G+ DE+L   E M      PD  +   LI    ++R  + A  ++ E+LE+ 
Sbjct: 492 LIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQK 551

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PD F Y  LI GF +++++  A K+ + +  +G   D+V YN MI   C  GM+  A 
Sbjct: 552 VQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAV 611

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
                + +  C P   TYT LI                   G  KKG +  A +F+  + 
Sbjct: 612 MCMSSMRKVGCIPDEFTYTTLID------------------GYAKKGDIKAALRFLCDMM 653

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            R C+P++++Y  L+    N+G  +  E L   M S GL PNVV Y++LI SL +  K  
Sbjct: 654 KRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAI 713

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAY--CKDGRLD-------------LAIEFLDYMI 326
            A            +P+  +   L++    C+ G ++               ++    +I
Sbjct: 714 QAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLI 773

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM---FSALWSSG 383
           SDG  P I  YN I+ + C++    +A+E+ EK+S+ GC P+  ++ ++   FS++  SG
Sbjct: 774 SDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSG 833

Query: 384 DKIRAL 389
               AL
Sbjct: 834 KWRSAL 839



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 47/318 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    R+ K  ++    E M   G   D+V    +IK + +    N+AV  M  + 
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           K G  PD F Y  LI G+ K   I+ A + L  +  R   P++VTY  +I   C+ G  +
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTD 678

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           SA  +F  +  +   P V+ YT+LI +     + DKA+               QA  +  
Sbjct: 679 SAEVLFASMQSEGLFPNVVHYTVLIGSLF---KKDKAI---------------QAAAYFE 720

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD- 277
            +    C P+  + + L+  L N                         Y  +I+S C D 
Sbjct: 721 HMLLNHCSPNDATMHYLVNGLTN-----------------------CRYG-MINSNCSDT 756

Query: 278 ---GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
               K    +DV +     GL P   +Y+ +I + C+   L  A+E  + M + GCLPD 
Sbjct: 757 DQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDP 816

Query: 335 VNYNTILAAFCKNGNADQ 352
           V + ++L  F   G + +
Sbjct: 817 VTFLSLLYGFSSVGKSGK 834



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 40/205 (19%)

Query: 336 NYNT--ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +Y+T  ++   C  G  ++   + E     GC P    YN +       GD  R L ++ 
Sbjct: 276 DYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLG 335

Query: 394 EMLSKGIEPDEIT-----------------------------------YNSLISCLCRDG 418
           EM  KGI P  +T                                   YN++I  LC+  
Sbjct: 336 EMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395

Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
              +A+ +L  M ++RF P V+++N +I  FC+   + E++++L     +  +PN+ +Y 
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYT 455

Query: 479 LLIEGIGYGGWRAEAMELANALVSM 503
            LI G      R E M  ++ LV M
Sbjct: 456 PLIHGFCV---RGEVMVASDLLVEM 477



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 66/240 (27%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI    + G    +L F+  M+   CKP++V                       
Sbjct: 626 EFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIV----------------------- 662

Query: 97  ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
                       Y +LI G+C     + A  +   ++S G  P+VV Y ++IGSL  +  
Sbjct: 663 -----------TYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDK 711

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQA------TMLEGQ---TDKAMK---LLDE--- 201
              A   F+ +L ++C P   T   L+         M+      TD+A K   LLD    
Sbjct: 712 AIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKG 771

Query: 202 -----------------MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                              +C+  M+G+A +    + ++GC PD +++  LL    ++GK
Sbjct: 772 LISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 228/484 (47%), Gaps = 32/484 (6%)

Query: 32  SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
           +  +    F  LI+    AG  ++++     M    CKPD+     ++    ++     A
Sbjct: 123 AIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLA 182

Query: 92  VRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           + V  ++L+    PDV  Y  LI G CK  + + A  + D +  RG  P+ + Y+I++  
Sbjct: 183 LAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSG 242

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
           LC    I  A ++F ++    C   +ITY +L+                   G CK G +
Sbjct: 243 LCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN------------------GFCKSGYL 284

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
             AF  ++ L   G    VI Y  L+  L    ++EE      +M+   ++P+V+ Y+I+
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I  L ++G+  +A+ +L    E+GL PD   Y+ LI  +C  G LD A      +    C
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDC 404

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            P+   Y+ ++   CKNG  ++A  IF+++  +GC P+V ++N++ + L  +     A  
Sbjct: 405 FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARL 464

Query: 391 MISEM-----------LSKGIEP--DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
           +  +M           LS+G +   D  +   ++  LC  GM+ +A  LL+ +  +   P
Sbjct: 465 LFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLP 524

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            + +YNI+I GFCK   IN + ++   M  KG  P+  TY  LI+G+   G   +A+E+ 
Sbjct: 525 DIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIF 584

Query: 498 NALV 501
             +V
Sbjct: 585 EQMV 588



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 198/433 (45%), Gaps = 32/433 (7%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    +  K  ++L   + M   G  P+ ++ + ++    Q +K   A R+   +   G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              D+  YN L++GFCK+  ++ A  +L  L   G    V+ Y  +I  L      E A 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
             + ++LR+N KP V+ YTI+I+    EG+  +A+ LL EM                   
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM------------------T 365

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG +PD I YN L++   +MG  +E E L  E+      PN  TYSILI  +C++G   
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-----------ISDGC 330
            A  + +  ++ G  P   +++ LI+  CK  RL+ A      M           +S G 
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGT 485

Query: 331 --LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
             + DI +   ++   C++G   +A ++  +L D G  P++ +YN + +     G+   A
Sbjct: 486 DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGA 545

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             +  EM  KG  PD +TY +LI  L R G  ++A+ +   M      P   +Y  I+  
Sbjct: 546 FKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605

Query: 449 FCKTRRINESIEV 461
            C+   I+ ++ V
Sbjct: 606 SCRENNISLALSV 618



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 190/410 (46%), Gaps = 26/410 (6%)

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           + +I    K N  EL  KVL  L++         ++++I +    GM E A + F  L+R
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFG-LMR 155

Query: 170 D-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           D +CKP +  + +++   + +     A+ + ++M  C                     PD
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC------------------NLNPD 197

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           V++Y +L+  L    K ++   L  EM  RG+ PN + YSI++S LC+  K  DA  +  
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +  G   D  +Y+ L++ +CK G LD A   L  +  DG +  ++ Y  ++    +  
Sbjct: 258 KMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A   ++K+      P+V  Y  M   L   G    AL ++ EM  +G+ PD I YN
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           +LI   C  G +DEA  L +++      P   +Y+I+I G CK   IN++  +   M + 
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR--DTFKRLNR 516
           GC P+  T+  LI G+     +A  +E A  L     I R    F RL++
Sbjct: 438 GCLPSVVTFNSLINGLC----KANRLEEARLLFYQMEIVRKPSLFLRLSQ 483



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 6/318 (1%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   FRA +++E+  + + M+    KPDV++ T +I+   QE +  +A+ ++ E+ E+ 
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD   YNALI GFC    ++ A  +   +      P+  TY+I+I  +C  G+I  A 
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +F ++ +  C P+V+T+  LI       + ++A  L  +M + +K  +     F+R  +
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL-----FLRLSQ 483

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                 D+ S  +++  L   G   +  KL+ +++  G+ P++ TY+ILI+  C+ G   
Sbjct: 484 GTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNIN 543

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  + +  + KG  PD+ +Y  LI    + GR + A+E  + M+  GC+P+   Y TI+
Sbjct: 544 GAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603

Query: 342 AAFCKNGNADQALEIFEK 359
              C+  N   AL ++ K
Sbjct: 604 TWSCRENNISLALSVWMK 621



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           FD+   Q M  ++R   +G   ++   +  +V +G  PD+     LI  F +    N A 
Sbjct: 489 FDIASLQVM--MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAF 546

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           ++ + ++  G  PD   Y  LI G  +A + E A ++ +++  +G  P+  TY  ++   
Sbjct: 547 KLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWS 606

Query: 152 CSRGMIESAFKVFDQLLRD 170
           C    I  A  V+ + LRD
Sbjct: 607 CRENNISLALSVWMKYLRD 625


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 215/433 (49%), Gaps = 34/433 (7%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P +  +N +I+ +C   +++ A  VL ++   G+ PD +T   +I  LC  G +  A   
Sbjct: 81  PSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHF 140

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            D ++    +   ++Y ILI      G+T  A+++L ++                  +CK
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
           + +V +A++    +  +   PDV++++ L+     +G+++E   L  EM+   + P+V T
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260

Query: 267 YSILISSLCRDGKTEDAVDVL----------RAAKE-------KGLTPDAYSYDPLISAY 309
           ++IL+ +LC++G T++  +VL            AK        + +TPD +SY  +I   
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320

Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
           CK   +D A+   + M   G  PD V Y++++   CK+     A E+ +++   G P +V
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADV 380

Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +Y +   AL  +    +A+ ++ ++  +GI+P+  TYN LI  LC++G  + A  +  D
Sbjct: 381 ITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQD 440

Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
           +    ++ TV +YNI+I G C     +E++ +L  M + GC P+  TY  +I  +     
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDE 500

Query: 490 RAEAMELANALVS 502
             +A +L   +++
Sbjct: 501 NHKAEKLLREMIA 513



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 210/437 (48%), Gaps = 36/437 (8%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
           G+ D +   +  ++  G  PD +  T LIK      K ++A+   + ++ +    +  +Y
Sbjct: 97  GEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSY 156

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
             LI+G CK  +   A +VL ++  +  + +VV Y+ +I SLC   ++  A++++ Q++ 
Sbjct: 157 GILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIV 216

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
               P V+T++ LI                   G C  G   +AF     +      PDV
Sbjct: 217 KKVSPDVVTFSALI------------------YGFCMVGQFKEAFGLFHEMVLTNINPDV 258

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMIS-----------------RGLEPNVVTYSILIS 272
            ++N+L+  L   G  +E + ++  M+                  R + P+V +Y+I+I 
Sbjct: 259 CTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIK 318

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
            LC+    ++A+ +    + KG+TPD  +Y  LI   CK  R+  A E LD M + G   
Sbjct: 319 RLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPA 378

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D++ Y + L A CKN   D+A+ + +K+ D G  PN+++YN +   L   G    A  + 
Sbjct: 379 DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIF 438

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            ++L KG +    TYN +I+ LC +G+ DEA+ LL  ME     P V++Y  II    K 
Sbjct: 439 QDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKN 498

Query: 453 RRINESIEVLAAMFEKG 469
              +++ ++L  M  +G
Sbjct: 499 DENHKAEKLLREMIARG 515



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 198/398 (49%), Gaps = 35/398 (8%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KY 101
           LIK     GK  E+L+F + ++A G + + V    LI    +  ++  A++V+  ++ K 
Sbjct: 124 LIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKL 183

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              +V  Y+ +I   CK   +  A ++  ++  +  SPDVVT++ +I   C  G  + AF
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEG-----------------QTDKAMKLLDEMG- 203
            +F +++  N  P V T+ IL+ A   EG                 Q +KA  + + +G 
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK 303

Query: 204 ----------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
                           +CK  MV +A      +  +G  PD ++Y+ L+  L    +   
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISH 363

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
             +L+ +M +RG   +V+TY+  + +LC++ + + AV +++  K++G+ P+  +Y+ LI 
Sbjct: 364 AWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILID 423

Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
             CK+GR + A      ++  G    +  YN ++   C  G  D+A+ + EK+ D GC P
Sbjct: 424 GLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP 483

Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           +V +Y T+  AL+ + +  +A  ++ EM+++G+  +++
Sbjct: 484 DVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 36/314 (11%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-------------- 85
           F  LI      G+F E+      MV     PDV     L+    +E              
Sbjct: 226 FSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMM 285

Query: 86  ---RKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
               + NKA  V  I+ K    PDV +Y  +I   CK   ++ A  + + +R +G +PD 
Sbjct: 286 KEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDK 345

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           VTY+ +I  LC    I  A+++ DQ+        VITYT  + A                
Sbjct: 346 VTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHA---------------- 389

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK   V +A   V+ ++ +G QP++ +YN+L+  L   G++E  + +  +++ +G +
Sbjct: 390 --LCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYK 447

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
             V TY+I+I+ LC +G  ++A+ +L   ++ G TPD  +Y+ +I A  K+     A + 
Sbjct: 448 VTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKL 507

Query: 322 LDYMISDGCLPDIV 335
           L  MI+ G L + V
Sbjct: 508 LREMIARGLLEEKV 521



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 40/368 (10%)

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
           +  A   F ++LR N  P++I +                 K+L  +          A   
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFN----------------KILGSLVKSNNNNYPIAISL 70

Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
              L+     P ++++N ++    ++G+ +    ++ +++  G  P+ +T + LI  LC 
Sbjct: 71  YHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCL 130

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDI 334
           +GK  +A+        +G   +  SY  LI+  CK G    A++ L  +  DG L   ++
Sbjct: 131 NGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKI--DGKLVNTNV 188

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
           V Y+TI+ + CK     +A E++ ++      P+V +++ +       G    A G+  E
Sbjct: 189 VMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHE 248

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST-----------------RFRP 437
           M+   I PD  T+N L+  LC++G   E   +L  M                    R  P
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTP 308

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
            V SY III   CK + ++E++ +   M  KG  P++ TY  LI+G+      + A EL 
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL- 367

Query: 498 NALVSMHA 505
             L  MHA
Sbjct: 368 --LDQMHA 373


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 219/479 (45%), Gaps = 51/479 (10%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
           A ++D+    +ESM  +  K D  +   LI  + +     KA++ +    K G  P  + 
Sbjct: 8   ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+++I  F K   ++    +  ++    F PD  T+NI+I SL     +E A  VF  + 
Sbjct: 68  YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           + N  P V TYTILI++    G+ D  MKL +                  S+ ++GCQP+
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFE------------------SMTAQGCQPN 169

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI----------------- 271
           + +Y+ ++    + G+ +E   +  +M+ +GL+P+ VTY+ILI                 
Sbjct: 170 LFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVG 229

Query: 272 ---------------SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
                          SSL R G  +  +++    K KGL  +  +Y  LI      GR++
Sbjct: 230 KSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVE 289

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
              +    M+ +    DIV  N +L    K G  + A E+F+ +   G   +  +YN + 
Sbjct: 290 DVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILI 349

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           + L  +G    A  ++ EM   G  P+ ITYN+LIS   +   +  A  L ++M+     
Sbjct: 350 NGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA 409

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           P V+SY+ +I GF K  R + +I +   M  +GC PN  TY LLI+ +   G    AME
Sbjct: 410 PNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  LI+R   AG+ ++       MV N  K D+V    ++    +  +   A  + +
Sbjct: 272 ELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQ 331

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            ++  G   D   YN LI+G  +A +++ A  +L  +   G +P+++TYN +I S     
Sbjct: 332 DMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWS 391

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            + +A ++F ++      P V++Y+ LI+     G+TD A+ L  EM             
Sbjct: 392 NLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREM------------- 438

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
                ++ GC P+ ++YN+L+  L+  G++    + + EM   G +   VT S+L+
Sbjct: 439 -----KAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%)

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           R D     ++ M  D    D   +NT++  + +    ++AL+     +  G  P   +Y+
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
           +M       GD    L M  +ML     PD  T+N LI  L +   V+EA  +  DM   
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
              P V +Y I+I       RI+  +++  +M  +GC+PN  TY  ++   G  G   EA
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEA 189

Query: 494 MELANALVS 502
            ++   +V 
Sbjct: 190 CDIFQQMVQ 198



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 5/184 (2%)

Query: 2   STVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIE 61
           + V+ C++       RV ++ E   +      +     +  LI    RAGK D +   + 
Sbjct: 311 NNVLDCLSKAG----RVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALISGFCKAN 120
            M  NGC P+++    LI  + +    + A R+ +E+ E+   P+V +Y++LI GF KA 
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426

Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
           + + A  +   +++ G  P+ VTYN++I  L   G   +A +   ++    C+   +T +
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKS 486

Query: 181 ILIQ 184
           +L++
Sbjct: 487 LLVR 490


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 236/509 (46%), Gaps = 57/509 (11%)

Query: 28  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN--GCKPDVVMCTKLIKKFFQE 85
           T+ L+F      +  +I++  R  + D   Y +  M      C  D  +C  ++  +   
Sbjct: 64  TNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFIC--VLNSYKNS 121

Query: 86  RKSNKAVRVMEILEKYG-EPDVFAYNALISGFC--KANQIELANKVLDRLRSRGFSPDVV 142
              ++A+++   ++++G +P V  YN L+        N+  +   V + +R  G  P+V 
Sbjct: 122 GLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVF 181

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           TYN+++ +LC  G ++ A K+  ++ +  C P  ++YT ++ A   +G+ ++A ++    
Sbjct: 182 TYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRF 241

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWE-- 246
                         G+C++G VG+ F  +  +   G  P+V+SY+ ++  L ++G+ E  
Sbjct: 242 GAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELA 301

Query: 247 ---------------------------------EGEKLMTEMISRGLEPNVVTYSILISS 273
                                            EG  L   M+  G+ PNVV Y+ L++ 
Sbjct: 302 LAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNG 361

Query: 274 LCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
           LC  G   +AVDV  R  K+    P+  +Y  L+  + K G L  A E  + M++ G  P
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           ++V Y +++   CKN   DQA  + + ++  GCPP V ++NT    L   G  + A+ ++
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            +M   G  PD  TYN L+  L     + EA  L+ ++E  +    +++YN ++ GF   
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLI 481
            +    ++VL  M   G KP+  T  ++I
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVI 570



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 207/479 (43%), Gaps = 59/479 (12%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K   + GK D +   +  M   GC PD V  T ++    ++ +  +A    E+  ++G
Sbjct: 186 LLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA---REVARRFG 242

Query: 103 EPDVFAY-NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
              V +  NALI G C+  ++     ++D +   G  P+VV+Y+ +I  L   G +E A 
Sbjct: 243 AEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELAL 302

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V  +++R  C+P V T++ L++   L G+                  VG+     R + 
Sbjct: 303 AVLGKMIRRGCRPNVHTFSSLMKGYFLGGR------------------VGEGVGLWRVMV 344

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL-EPNVVTYSILISSLCRDGKT 280
             G +P+V+ YN LL  L   G   E   +   M       PNV TYS L+    + G  
Sbjct: 345 LEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDL 404

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           + A +V       G+ P+   Y  ++   CK+   D A   +D M +DGC P +V +NT 
Sbjct: 405 QGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTF 464

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPP--------------------------------- 367
           +   C  G    A+ + +++   GC P                                 
Sbjct: 465 IKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKV 524

Query: 368 --NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
             N+ +YNT+     S G +   L ++  ML  G++PD IT N +I    + G V  A+ 
Sbjct: 525 ELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQ 584

Query: 426 LLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            L  + + +   P +I++  ++ G C +  I E+I  L  M  KG  PN  T+ +L+ G
Sbjct: 585 FLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRG 643



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 30/378 (7%)

Query: 25  RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
           RPN H          F  L+K  F  G+  E +     MV  G +P+VV+   L+     
Sbjct: 314 RPNVH---------TFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCC 364

Query: 85  ERKSNKAVRVMEILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
                +AV V   +EK  +  P+V  Y+ L+ GF KA  ++ A++V +++ + G  P+VV
Sbjct: 365 SGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVV 424

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
            Y  M+  LC   M + A+++ D +  D C PTV+T+   I+                  
Sbjct: 425 VYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK------------------ 466

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           G+C  G V  A + V  ++  GC PD  +YN LL  L ++ + +E  +L+ E+  R +E 
Sbjct: 467 GLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVEL 526

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N+VTY+ ++      GK E  + VL      G+ PDA + + +I AY K G++  AI+FL
Sbjct: 527 NLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL 586

Query: 323 DYMISDGCL-PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           D + +   L PDI+ + ++L   C +   ++A+    K+ + G  PN+++++ +    + 
Sbjct: 587 DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFK 646

Query: 382 SGDKIRALGMISEMLSKG 399
               +  + ++ ++L KG
Sbjct: 647 KLGHMGPIRILDDILGKG 664



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 169/349 (48%), Gaps = 33/349 (9%)

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
           K T +TY ++I+      + D    +L +M                 +E   C  D  S+
Sbjct: 70  KHTPLTYHVMIEKLGRNSELDALHYILHQM----------------KIERIPCSQD--SF 111

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
             +L +  N G  +   K+   +   G +P V  Y+ L+ +L   G++ +   ++ A  E
Sbjct: 112 ICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALL--GESGNKFHMIGAVYE 169

Query: 293 ----KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +G+ P+ ++Y+ L+ A CK+G+LD A + L  M   GC+PD V+Y T++AA C++G
Sbjct: 170 NMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDG 229

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
             ++A E+  +    G    VS  N +   L   G      G++ EM+  G++P+ ++Y+
Sbjct: 230 RVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYS 286

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           S+IS L   G V+ A+ +L  M     RP V +++ ++ G+    R+ E + +   M  +
Sbjct: 287 SVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE 346

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           G +PN   Y  L+ G+   G  AEA+++   +       +D F R N T
Sbjct: 347 GVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM------EKDCFCRPNVT 389


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 212/440 (48%), Gaps = 31/440 (7%)

Query: 76  TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
           T LI+ + +     KAV   E+++ +  +PDVF YN ++    +   + LA  + +R+  
Sbjct: 130 TVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLK 189

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
               P++ T++I+I  +C  G  ++A ++FD++ +    P  ITYTI+I       + D 
Sbjct: 190 LNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADV 249

Query: 195 AMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           A +L   M                 G CK G V +A   ++  E      D   Y+ L+ 
Sbjct: 250 AYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLID 309

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
            L    ++E+ +    +M    ++P+V+ Y+I++  L + GK +DA+ +L    E+GL P
Sbjct: 310 GLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVP 369

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
           D + Y+ LI  YC  G LD A      +  + C      Y  ++   C++G    A +IF
Sbjct: 370 DTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIF 429

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-----------LSKGIEP--DE 404
            ++   GC P+V ++N +      +G+  +A  +  +M           LS+G     D 
Sbjct: 430 NEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDT 489

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
            +  +++  LC  G++ +A  +L+ +  + F P +I+YNI+I GFCK   IN + ++   
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549

Query: 465 MFEKGCKPNETTYVLLIEGI 484
           +  KG  P+  TY  LI G+
Sbjct: 550 LQLKGLSPDSVTYGTLINGL 569



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 185/381 (48%), Gaps = 18/381 (4%)

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
           ++N +I    K N  EL  +VL  ++  GFS     + ++I +     MIE A + F+ +
Sbjct: 93  SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
              +CKP V TY  ++                    M +K +V  A      +    C P
Sbjct: 153 KDFDCKPDVFTYNTVLHV------------------MVRKEVVLLALGIYNRMLKLNCLP 194

Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
           ++ ++++L+  +   GK +   ++  EM  R + PN +TY+I+IS LC+  K + A  + 
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254

Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
            A K+ G  PD+ +Y+ L+  +CK GR+D A+  L Y   D  + D   Y+ ++    + 
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRA 314

Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
              + A   + K+++    P+V  Y  M   L  +G    AL +++EM  +G+ PD   Y
Sbjct: 315 RRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCY 374

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           N+LI   C  G++DEA  L +++       +  +Y I+I G C++  + ++ ++   M +
Sbjct: 375 NALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEK 434

Query: 468 KGCKPNETTYVLLIEGIGYGG 488
            GC P+  T+  LI+G    G
Sbjct: 435 HGCYPSVVTFNALIDGFCKAG 455



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 193/428 (45%), Gaps = 44/428 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
           LI   FRA +F+++  +   M  +  KPDV++ T ++K   +  K   A+R++ E+ E+ 
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG 366

Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD   YNALI G+C    ++ A  +   +          TY I+I  +C  G++  A 
Sbjct: 367 LVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQ 426

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           ++F+++ +  C P+V+T+  LI      G  +KA  L  +M + +   +     F+R  +
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSL-----FLRLSQ 481

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                 D  S   ++  L + G   +   ++ ++   G  PN++TY+ILI   C+ G   
Sbjct: 482 GANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNIN 541

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
            A  + +  + KGL+PD+ +Y  LI+      R + A   LD ++ +GC P    Y + +
Sbjct: 542 GAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFM 601

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL-GMISEMLSKGI 400
              C+      A  ++ K                          +R++ G  SE+L K +
Sbjct: 602 TWSCRRNKITLAFSLWLKY-------------------------LRSIPGRDSEVL-KSV 635

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           E +              G V+EAV  L++M+       +  Y I ++G C+  R+ E+++
Sbjct: 636 EEN-----------FEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALK 684

Query: 461 VLAAMFEK 468
           +   + E 
Sbjct: 685 IFFTLEEH 692



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 133/271 (49%)

Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
           +S+NM++  L+    +E   +++ E+   G   +   +++LI +  +    E AV+    
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
            K+    PD ++Y+ ++    +   + LA+   + M+   CLP+I  ++ ++   CK+G 
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
              AL++F++++     PN  +Y  + S L  +     A  +   M   G  PD +TYN+
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
           L+   C+ G VDEA+GLL   E  R+      Y+ +I G  + RR  ++      M E  
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            KP+   Y ++++G+   G   +A+ L N +
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEM 362



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 59/366 (16%)

Query: 131 RLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEG 190
           RLRS       V++N++I  L      E  ++V  ++ R     +   +T+LIQA     
Sbjct: 87  RLRSW------VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYA--- 137

Query: 191 QTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                     +M M +K +  ++F+ ++  +   C+PDV +YN +L  ++          
Sbjct: 138 ----------KMDMIEKAV--ESFEMMKDFD---CKPDVFTYNTVLHVMVRKEVVLLALG 182

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           +   M+     PN+ T+SILI  +                                   C
Sbjct: 183 IYNRMLKLNCLPNIATFSILIDGM-----------------------------------C 207

Query: 311 KDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVS 370
           K G+   A++  D M     LP+ + Y  I++  C+   AD A  +F  + D GC P+  
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267

Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
           +YN +       G    ALG++          D+  Y+ LI  L R    ++A      M
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
                +P VI Y I++ G  K  +  +++ +L  M E+G  P+   Y  LI+G    G  
Sbjct: 328 TEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLL 387

Query: 491 AEAMEL 496
            EA  L
Sbjct: 388 DEAKSL 393



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 38/281 (13%)

Query: 94  VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +M++ +    P++  YN LI GFCKA  I  A K+   L+ +G SPD VTY  +I  L S
Sbjct: 512 LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA 213
               E AF V DQ+L++ C P    Y   +  +                  C++  +  A
Sbjct: 572 ANREEDAFTVLDQILKNGCTPITEVYKSFMTWS------------------CRRNKITLA 613

Query: 214 F----QFVRSLESRGCQPDVISYNMLLRTL---LNMGKWEEGEKLMTEMISRGLEPNVVT 266
           F    +++RS+  R  +        +L+++      G+ EE  + + EM  +  +  +  
Sbjct: 614 FSLWLKYLRSIPGRDSE--------VLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAP 665

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+I +  LC+ G+ E+A+ +    +E  +     S   LI    K G LDLA E   Y I
Sbjct: 666 YTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTI 725

Query: 327 SDG--CLPDIVNYNTILAAFCKNGNA-DQALEIFEKLSDVG 364
             G   +P I   N +L +  ++ +  ++A ++  ++  +G
Sbjct: 726 DKGYMLMPRIC--NRLLKSLLRSEDKRNRAFDLLSRMKSLG 764


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 221/442 (50%), Gaps = 31/442 (7%)

Query: 62  SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK----YGEPDVFAYNALISGFC 117
           S+V  G K D    T L  K F+  K ++ VR+  +L      YGE     Y  ++ G C
Sbjct: 9   SVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGET---TYKLVVDGLC 65

Query: 118 KANQIELANKVLDRLR--SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
            A    +AN+ L+ +R  S  ++P +  YN +I  LC    +  A+KV ++++ ++  P 
Sbjct: 66  GAG---MANQALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122

Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
           V TYTIL+                   G+C+      A +  + ++  GC+P+ I+Y  L
Sbjct: 123 VFTYTILLN------------------GLCRSNKTKLAREVFQEMKRNGCKPNPITYGTL 164

Query: 236 LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL 295
           ++ L   G+ +E  ++M E  S  L  +V+T + ++  LC+  + +DA+  +   ++ G+
Sbjct: 165 IQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV 224

Query: 296 TPDAYSYDPLISAYCKDGRLDLAIEFLDY-MISDGCLPDIVNYNTILAAFCKNGNADQAL 354
            P+  +Y  L+  + + G LD  I F +      G   +   Y   L A CK G  D+A 
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRAR 284

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           +  E+L   G  P+V +Y+ + +    +G    +L ++ +M   G++PD +TY++LI+ L
Sbjct: 285 KSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
           C++    +A  LL  ME+    P V++YN ++ G CK+ +++E   V   M +  C P+ 
Sbjct: 345 CKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDV 404

Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
            TY +++ G+   G    A++L
Sbjct: 405 VTYSIIMNGLSKAGMLDSAVKL 426



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 221/460 (48%), Gaps = 19/460 (4%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V    F  L  + FR  KF E +     + + G          ++        +N+A+ +
Sbjct: 17  VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +  L     P +F YN +I+G C+A+++  A KVL+++      P+V TY I++  LC  
Sbjct: 77  VRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
              + A +VF ++ R+ CKP  ITY  LIQ     G+ D+A++++ E             
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ------------ 184

Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
              RSLE      DVI+   ++  L    + ++  K M EM   G+ PN VTYS L+   
Sbjct: 185 ---RSLE---LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238

Query: 275 CRDGKTEDAVDVLRAAK-EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
            + G+ +  +      K  KG + +A +Y   + A CK G LD A + ++ +   G +PD
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298

Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
           +V Y+ ++  F + G  D +LE+ E +   G  P+V +Y+T+ + L        A  ++ 
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358

Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
            M + G  P+ +TYNS++  LC+ G +DE   +   M  +R  P V++Y+II+ G  K  
Sbjct: 359 LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAG 418

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            ++ ++++   +      P+   Y ++I  +   G   EA
Sbjct: 419 MLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           RS+   G + D  ++ +L   L    K+ E  +L T + SRG+     TY +++  LC  
Sbjct: 8   RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 278 GKTEDAVDVLRAAKEKGL-TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           G    A++++R  +  G+ TP  + Y+ +I+  C+  R+  A + L+ M+ +  +P++  
Sbjct: 68  GMANQALELVR--ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           Y  +L   C++     A E+F+++   GC PN  +Y T+   L  +G+   AL ++ E  
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQR 185

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           S  +  D IT  +++  LC+   +D+A+  + +M     RP  ++Y+ ++ GF
Sbjct: 186 SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 176/348 (50%), Gaps = 18/348 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           GF  +V  +NI++   C  G I  A KVFD++ + + +PTV+++  LI            
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLIN----------- 283

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G CK G +   F+    +E    +PDV +Y+ L+  L    K +   +L  EM
Sbjct: 284 -------GYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEM 336

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             RGL PN V ++ LI    R+G+ +   +  +    KGL PD   Y+ L++ +CK+G L
Sbjct: 337 CERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   +D MI  G  PD V Y T++  FC+ G+ D ALEI +++   G   +   ++ +
Sbjct: 397 VAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSAL 456

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
              +   G  I A   + EML  G++PD++TY  ++   C+ G       LL +M+S   
Sbjct: 457 ICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P V++YN+++ G CK  ++  +  +L AM   G  P++ TY  L+EG
Sbjct: 517 IPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 155/305 (50%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK+G +  A +    +  R  +P V+S+N L+     +G  + G +L   M      P+V
Sbjct: 251 CKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDV 310

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TYS LI++LC++ K + A  +     E+GL P+   +  LI  + ++G++DL  E    
Sbjct: 311 FTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQK 370

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           M+S G  PDIV YNT++  FCKNG+   A  I + +   G  P+  +Y T+       GD
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGD 430

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              AL +  EM   GIE D + +++LI  +C++G V +A   L +M     +P  ++Y +
Sbjct: 431 VDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTM 490

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           ++  FCK        ++L  M   G  PN  TY +L+ G+   G    A  L +A++++ 
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVG 550

Query: 505 AISRD 509
            +  D
Sbjct: 551 VVPDD 555



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 171/349 (48%), Gaps = 22/349 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           F  LI    + G  D        M  +  +PDV   + LI    +E K + A R+  E+ 
Sbjct: 278 FNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMC 337

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   P+   +  LI G  +  QI+L  +   ++ S+G  PD+V YN ++   C  G + 
Sbjct: 338 ERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           +A  + D ++R   +P  +TYT LI                   G C+ G V  A +  +
Sbjct: 398 AARNIVDGMIRRGLRPDKVTYTTLID------------------GFCRGGDVDTALEIRK 439

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            ++  G + D + ++ L+  +   G+  + E+ + EM+  G++P+ VTY++++ + C+ G
Sbjct: 440 EMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKG 499

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
             +    +L+  +  G  P+  +Y+ L++  CK G++  A   LD M++ G +PD + YN
Sbjct: 500 DAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYN 559

Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
           T+L    ++ NA +    +++  ++G   +++SY ++ + L+ +    R
Sbjct: 560 TLLEGHHRHANASKH---YKQKPEIGIVADLASYKSLVNELYRASKDHR 605



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 103/205 (50%)

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           + G   + Y ++ L++ +CK+G +  A +  D +      P +V++NT++  +CK GN D
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLD 292

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
               +   +      P+V +Y+ + +AL        A  +  EM  +G+ P+++ + +LI
Sbjct: 293 VGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI 352

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
               R+G +D        M S   +P ++ YN ++ GFCK   +  +  ++  M  +G +
Sbjct: 353 HGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412

Query: 472 PNETTYVLLIEGIGYGGWRAEAMEL 496
           P++ TY  LI+G   GG    A+E+
Sbjct: 413 PDKVTYTTLIDGFCRGGDVDTALEI 437


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 18/364 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+   +N+++  L   G + SA  VFD++     + TV+++  +I            
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS----------- 159

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  GMC+ G +  A    R +   G  PDV +Y  L++ L  +G+ E+   +  +M
Sbjct: 160 -------GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             RG++PN V ++ILI + C+ G  E  +++ R  +E+G+ PDA +Y+ +++  C+   L
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   +  M S G  PD V Y T++  +CK    D A+EI + +   G   +  +Y  +
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L  +G    A  ++ EM+  G+EPD  TY  +I   CR G V   + LL +M++   
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +P V++YN+I+ GFCK  ++  +  +L AM   G  P++ TY +L++G    G   +  E
Sbjct: 393 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 452

Query: 496 LANA 499
           L +A
Sbjct: 453 LKSA 456



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 19/369 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E+  F   ++  G  P+  +   L++   +  +   A  V + ++  G    V ++N +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           SG C+A  ++ A  +  R+   G +PDV TY  +I  LC  G IE A  VF+++     K
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P  + +TILI A                   CKKG      +  R +  RG +PD ++YN
Sbjct: 219 PNAVVFTILIDA------------------HCKKGDAETMLELHREMRERGVRPDAVTYN 260

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            ++  L      +    ++ EM S GL P+ VTY+ LI   C++ + + A+++ +    +
Sbjct: 261 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAE 320

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+  D  +Y  LIS   K GR   A   L  M+  G  PD   Y  ++ AFC+ G+    
Sbjct: 321 GVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 380

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L + +++ + G  P V +YN + +     G    A  +++ M++ G+ PD+ITYN L+  
Sbjct: 381 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 440

Query: 414 LCRDGMVDE 422
            C+ G V +
Sbjct: 441 HCKHGKVTD 449



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 146/271 (53%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F   L   G  P+   +N+L+R L+ +G+    + +  EM SRG+   VV+++ +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S +CR G  + A  + R   E G+TPD Y+Y  LI   C+ GR++ A    + M   G  
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+ V +  ++ A CK G+A+  LE+  ++ + G  P+  +YN + + L  + D   A G+
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM S G+ PD +TY +LI   C++  +D A+ +  +M +       ++Y  +I G  K
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             R  ++  VL  M E G +P+ TTY ++I+
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVID 369



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 22/308 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+   R G+ +++    E M   G KP+ V+ T LI    ++  +   + +  E+ 
Sbjct: 189 YGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 248

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PD   YNA+++G C+A  ++ A+ ++  +RS G  PD VTY  +I   C    ++
Sbjct: 249 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 308

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++ +      +TYT LI      G++  A ++L EM                
Sbjct: 309 MAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM---------------- 352

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +E+ G +PD  +Y M++      G  + G +L+ EM ++G +P VVTY+++++  C+ G
Sbjct: 353 -MEA-GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +L A    G++PD  +Y+ L+  +CK G++    +  +   + G +PD+  Y 
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV---TDIEELKSAKGTVPDLGVYT 467

Query: 339 TILAAFCK 346
           +I+    K
Sbjct: 468 SIVGEIVK 475



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 4/184 (2%)

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A  F   ++  G  P+   +N ++    + G    A  +F+++   G    V S+NTM S
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            +  +GD   A  +   M   G+ PD  TY +LI  LCR G +++A G+   M     +P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
             + + I+I   CK       +E+   M E+G +P+  TY  ++ G+     RA  ++ A
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL----CRARDLKSA 275

Query: 498 NALV 501
           + +V
Sbjct: 276 SGIV 279



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           SA  RP+T           +  LI    +  + D ++   ++MVA G   D V  T LI 
Sbjct: 284 SAGLRPDT---------VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334

Query: 81  KFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +S  A RV+ E++E   EPD   Y  +I  FC+   ++   ++L  ++++G  P
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
            VVTYN+++   C  G +++A  + + ++     P  ITY IL+      G+
Sbjct: 395 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK 446


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 18/364 (4%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G  P+   +N+++  L   G + SA  VFD++     + TV+++  +I            
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS----------- 283

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  GMC+ G +  A    R +   G  PDV +Y  L++ L  +G+ E+   +  +M
Sbjct: 284 -------GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
             RG++PN V ++ILI + C+ G  E  +++ R  +E+G+ PDA +Y+ +++  C+   L
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A   +  M S G  PD V Y T++  +CK    D A+EI + +   G   +  +Y  +
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L  +G    A  ++ EM+  G+EPD  TY  +I   CR G V   + LL +M++   
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
           +P V++YN+I+ GFCK  ++  +  +L AM   G  P++ TY +L++G    G   +  E
Sbjct: 517 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 576

Query: 496 LANA 499
           L +A
Sbjct: 577 LKSA 580



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 19/369 (5%)

Query: 55  ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
           E+  F   ++  G  P+  +   L++   +  +   A  V + ++  G    V ++N +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
           SG C+A  ++ A  +  R+   G +PDV TY  +I  LC  G IE A  VF+++     K
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           P  + +TILI A                   CKKG      +  R +  RG +PD ++YN
Sbjct: 343 PNAVVFTILIDAH------------------CKKGDAETMLELHREMRERGVRPDAVTYN 384

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
            ++  L      +    ++ EM S GL P+ VTY+ LI   C++ + + A+++ +    +
Sbjct: 385 AIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAE 444

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
           G+  D  +Y  LIS   K GR   A   L  M+  G  PD   Y  ++ AFC+ G+    
Sbjct: 445 GVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 504

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
           L + +++ + G  P V +YN + +     G    A  +++ M++ G+ PD+ITYN L+  
Sbjct: 505 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 564

Query: 414 LCRDGMVDE 422
            C+ G V +
Sbjct: 565 HCKHGKVTD 573



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 146/271 (53%)

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A  F   L   G  P+   +N+L+R L+ +G+    + +  EM SRG+   VV+++ +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           S +CR G  + A  + R   E G+TPD Y+Y  LI   C+ GR++ A    + M   G  
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+ V +  ++ A CK G+A+  LE+  ++ + G  P+  +YN + + L  + D   A G+
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
           + EM S G+ PD +TY +LI   C++  +D A+ +  +M +       ++Y  +I G  K
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
             R  ++  VL  M E G +P+ TTY ++I+
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVID 493



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 22/308 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           +  LI+   R G+ +++    E M   G KP+ V+ T LI    ++  +   + +  E+ 
Sbjct: 313 YGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 372

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           E+   PD   YNA+++G C+A  ++ A+ ++  +RS G  PD VTY  +I   C    ++
Sbjct: 373 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 432

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
            A ++   ++ +      +TYT LI      G++  A ++L EM                
Sbjct: 433 MAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM---------------- 476

Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
            +E+ G +PD  +Y M++      G  + G +L+ EM ++G +P VVTY+++++  C+ G
Sbjct: 477 -MEA-GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534

Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
           + ++A  +L A    G++PD  +Y+ L+  +CK G++    +  +   + G +PD+  Y 
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV---TDIEELKSAKGTVPDLGVYT 591

Query: 339 TILAAFCK 346
           +I+    K
Sbjct: 592 SIVGEIVK 599



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 7/225 (3%)

Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
           +G   DA  ++  A  +G+  +  S   L+S +        A  F   ++  G  P+   
Sbjct: 186 EGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKL 242

Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
           +N ++    + G    A  +F+++   G    V S+NTM S +  +GD   A  +   M 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302

Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
             G+ PD  TY +LI  LCR G +++A G+   M     +P  + + I+I   CK     
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362

Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             +E+   M E+G +P+  TY  ++ G+     RA  ++ A+ +V
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGL----CRARDLKSASGIV 403



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 21  SAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIK 80
           SA  RP+T           +  LI    +  + D ++   ++MVA G   D V  T LI 
Sbjct: 408 SAGLRPDT---------VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458

Query: 81  KFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSP 139
              +  +S  A RV+ E++E   EPD   Y  +I  FC+   ++   ++L  ++++G  P
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518

Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQ 191
            VVTYN+++   C  G +++A  + + ++     P  ITY IL+      G+
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK 570


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
           G+ P+V  +NI++   C  G + +A  VFD++ R   +P+V+++  LI            
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLIS----------- 269

Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
                  G C+   V + F     +ES    PDV +Y+ L+  L    + EE   L  EM
Sbjct: 270 -------GYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322

Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
              GL PN VT++ LI   C+ GK + A+      K++G+ PD  +Y+ LI+  C+DG L
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382

Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
             A + L+ MI +G  PD + + T++   CK+G+ D ALEI +++ + G   +  ++  +
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTAL 442

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            S L   G    A  M+ +MLS G +PD+ TY  +I C C+ G V     LL +M+    
Sbjct: 443 ISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGR 502

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            P V++YN ++ GFCK  ++  +  +L AM      PN+ T+ +L++G
Sbjct: 503 VPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 170/341 (49%), Gaps = 17/341 (4%)

Query: 95  MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
           +E+L+    P+V+ +N L+ GFCK   +  A  V D +  RG  P VV++N +I   C  
Sbjct: 215 LEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRS 274

Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
             +E  F +   +  +   P V TY+ LI     E + ++A  L DEM            
Sbjct: 275 KNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF 334

Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G CK G +  A +    ++ RG +PD+I+YN L+  L   G  +E  KL+ EMI 
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            G +P+ +T++ L+   C+DG  + A+++     E+G+  D  ++  LIS  C+DGR+  
Sbjct: 395 NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   L  M+S G  PD   Y  ++  FCK G+     ++ +++   G  P V +YN + +
Sbjct: 455 AERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMN 514

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
                G    A  ++  ML+  + P++IT+N L+   C+ G
Sbjct: 515 GFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 19/405 (4%)

Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE-SAFKVF 164
           V  ++ALI  +  +  IE A + L  ++   FS  V   + ++  +          ++ +
Sbjct: 155 VLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFY 214

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
            ++L     P V  + IL+                   G CK G V  A      +  RG
Sbjct: 215 LEVLDYGYPPNVYLFNILMH------------------GFCKIGDVMNARMVFDEISRRG 256

Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
            +P V+S+N L+         EEG  L + M S  + P+V TYS LI+ LC++ + E+A 
Sbjct: 257 LRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEAN 316

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +     E GL P+  ++  LI   CK G++DLA+   + M   G  PD++ YN ++   
Sbjct: 317 GLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGL 376

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           C++G+  +A ++  ++   G  P+  ++ T+       GD   AL +   M+ +GIE D+
Sbjct: 377 CRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDD 436

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           + + +LIS LCRDG V +A  +L DM S   +P   +Y ++I  FCK   +    ++L  
Sbjct: 437 VAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKE 496

Query: 465 MFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           M   G  P   TY  L+ G    G    A  L +A+++M  +  D
Sbjct: 497 MQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPND 541



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 144/325 (44%), Gaps = 56/325 (17%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           F  LI    + GK D +L   E M   G +PD++                          
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLI-------------------------- 367

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
                    YNALI+G C+   ++ A K+L+ +   GF PD +T+  ++   C  G ++S
Sbjct: 368 --------TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDS 419

Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           A ++ D+++ +  +   + +T LI                   G+C+ G V  A + ++ 
Sbjct: 420 ALEIKDRMVEEGIELDDVAFTALIS------------------GLCRDGRVRDAERMLKD 461

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
           + S G +PD  +Y M++      G  + G KL+ EM   G  P VVTY+ L++  C+ G+
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            ++A  +L A     + P+  +++ L+  +CK G    +++F  +    G + D  +Y  
Sbjct: 522 MKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS---SVDFKIFNGEKGLVSDYASYTA 578

Query: 340 ILAAFCKNGNADQALEIFEKLSDVG 364
           ++    K  + DQ   + E  + +G
Sbjct: 579 LVNESIKI-SKDQLKSVLECPTHIG 602


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 171/342 (50%), Gaps = 22/342 (6%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P    YN+LISG CKA +   A  +L+ +   G  PD+ TY  +I   C     + A +V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ-FVRSLES 222
           F+QL+    +P V+TY+ LI                   G+CK+G + +A   F R ++S
Sbjct: 112 FEQLVARGFRPDVVTYSCLID------------------GLCKEGRLKEAIDLFGRMIKS 153

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
             C P+ ++YN L+     MGK +E   L+  M   G  P+VVTY+ L++  C+  + +D
Sbjct: 154 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 213

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A D+L     KGLTP+  ++  L+   C++ RL  A+  L  M    C P +  YNTIL 
Sbjct: 214 AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 273

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
            +C+    ++A +    L ++ CPPNV S+N M   L        A+ ++ E   +   P
Sbjct: 274 GYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 331

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYN 443
           D + Y ++I  LCR+  VDEA  +   M E     P  I+Y+
Sbjct: 332 DVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 165/310 (53%), Gaps = 11/310 (3%)

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P  ++YN L+  L    +  E   L+ EM+  G  P++ TY+ LI+  C+  K++DA+ V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG-CLPDIVNYNTILAAFC 345
                 +G  PD  +Y  LI   CK+GRL  AI+    MI  G C+P+ V YN++++ FC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 346 KNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEI 405
           + G  D+A+ + E++++ G  P+V +Y T+ +          A  ++++M  KG+ P+ +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 406 TYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           T+ SL+  LCR+  + +AV +L +M      PTV +YN I+ G+C+  ++ E+ + +  +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 466 FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL--------ANALVSMHAISRDTFKRLNRT 517
            E  C PN  ++ ++I G+      +EAMEL         N  V M+    D   R  + 
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 518 FPLLDVYKEI 527
                VY+++
Sbjct: 350 DEACRVYRKM 359



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 21/310 (6%)

Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
           PT +TY  LI                   G+CK     +A+  +  +   GC PD+ +Y 
Sbjct: 52  PTAVTYNSLIS------------------GLCKAERASEAYDLLEEMVYSGCIPDIFTYT 93

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKE 292
            L+       K ++  ++  ++++RG  P+VVTYS LI  LC++G+ ++A+D+  R  K 
Sbjct: 94  TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
               P+  +Y+ LIS +C+ G++D A+  L+ M   G  PD+V Y T++  FCK    D 
Sbjct: 154 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 213

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           A ++  +++  G  PNV ++ ++   L        A+ ++ EM  K   P   TYN+++ 
Sbjct: 214 AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 273

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             CR   ++EA   +  +E     P V+S+NI+I G CK  R +E++E++     + C P
Sbjct: 274 GYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 331

Query: 473 NETTYVLLIE 482
           +   Y  +I+
Sbjct: 332 DVVMYTTVID 341



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 22/321 (6%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI    +A +  E+   +E MV +GC PD+   T LI  F + +KS+ A+RV E L 
Sbjct: 57  YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMI 157
             G  PDV  Y+ LI G CK  +++ A  +  R+ +S    P+ VTYN +I   C  G +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
           + A  + +++      P V+TYT L+       + D A  LL++M               
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
             G+C++  +  A   +  +  + C P V +YN +L     + + EE  K M E +    
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--C 294

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
            PNVV+++I+I  LC+  ++ +A++++  A+ +   PD   Y  +I   C++ ++D A  
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACR 354

Query: 321 FLDYMISD-GCLPDIVNYNTI 340
               M+ + GCLP+ + Y+T 
Sbjct: 355 VYRKMLEEPGCLPNSITYSTF 375



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%)

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
           A ++    P A +Y+ LIS  CK  R   A + L+ M+  GC+PDI  Y T++  FCK+ 
Sbjct: 44  AVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK 103

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG-IEPDEITY 407
            +D AL +FE+L   G  P+V +Y+ +   L   G    A+ +   M+  G   P+ +TY
Sbjct: 104 KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 163

Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           NSLIS  CR G +DEA+ LL  M  T   P V++Y  ++ GFCK  R++++ ++L  M  
Sbjct: 164 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 223

Query: 468 KGCKPNETTYVLLIEGI 484
           KG  PN  T+  L++G+
Sbjct: 224 KGLTPNVVTFTSLMDGL 240



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 29/299 (9%)

Query: 7   CINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVAN 66
           C + KS++ +RV      R       F      +  LI    + G+  E++     M+ +
Sbjct: 100 CKSKKSDDALRVFEQLVAR------GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153

Query: 67  G-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIEL 124
           G C P+ V    LI  F +  K ++A+ ++E + + G  PDV  Y  L++GFCK  +++ 
Sbjct: 154 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 213

Query: 125 ANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
           A  +L+++  +G +P+VVT+  ++  LC    +  A  +  ++ R +C PTV TY  ++ 
Sbjct: 214 AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 273

Query: 185 ATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G C+   + +A +F+  LE   C P+V+S+N+++R L  + +
Sbjct: 274 ------------------GYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 313

Query: 245 WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA-KEKGLTPDAYSY 302
             E  +L+ E   R   P+VV Y+ +I  LCR+ K ++A  V R   +E G  P++ +Y
Sbjct: 314 SSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITY 372


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 215/449 (47%), Gaps = 18/449 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    + G+  ++L   E M+A G  PD+   T ++  + +E + ++A   ++ +E+  
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSC 286

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            EP+V  YN+LI G+     +  A KVL  +  +G   +  TY ++I   C RG +E A 
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAE 346

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
           K+   ++  N       Y +LI A    G+ D A+++ D M                 G 
Sbjct: 347 KLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           CK G V +A + + S++    +PD   YN LL        + +  KL  EM ++G+   V
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ L+ +L   G  E A+ +     ++G+ P+  +Y  L+ A+ K G  D A+     
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +S G    I  YNT++  FCK     QA EIF K+ ++G PP+  +Y T+       G+
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
            + AL +       GI      YNSLI+ + R   + +  GLL +M++    P V++Y  
Sbjct: 587 LVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGS 646

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPN 473
           +I G+C    ++++      M +KG  PN
Sbjct: 647 LIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 239/556 (42%), Gaps = 90/556 (16%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  +  LI     AG+ D++L   ++M+  G K + V+C  LI  + +    NKA  V
Sbjct: 359 VDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEV 418

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +  ++ +  +PD + YN L+ GFCK      A K+ D + ++G +  VVTYN ++ +L  
Sbjct: 419 LVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFH 478

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G +E A  +++ + +    P  +TY  L+ A    G  D+AM +  +            
Sbjct: 479 VGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITL 538

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL----- 251
                 G CK   + QA +    ++  G  PD I+Y  L+     +G   E  KL     
Sbjct: 539 YNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSE 598

Query: 252 ------------------------------MTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                                         + EM +R L PNVVTY  LI+  C  G  +
Sbjct: 599 RDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMD 658

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD------------- 328
            A +      +KG+ P+      ++S+  + G++D A   + + I+D             
Sbjct: 659 KAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA-NLILHQIADIDPIAAHAHSVEL 717

Query: 329 ---------------------GCLP--DIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
                                  +P  + + YN  +   CK+ N D    I   L   G 
Sbjct: 718 PKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGF 777

Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
            P+  +Y ++  A  + G    A  +  +M++ G+ P+ + YN+LI+ LC+ G +D A  
Sbjct: 778 CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARR 837

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
           L   +      PTV++YN +I G+CK  R  E++E+   M E+G  P+  TY  LI G+ 
Sbjct: 838 LFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLY 897

Query: 486 YGGWRAEAMELANALV 501
             G   +++ L N ++
Sbjct: 898 MEGKSEQSVGLLNEMM 913



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 217/463 (46%), Gaps = 58/463 (12%)

Query: 90  KAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRS--RGFSPDVVTYNIM 147
           K V ++     Y E  V+  N L+   CK N I  A+ V D L S  R FS     ++++
Sbjct: 137 KIVHILSRARMYKEVRVY-LNELVV-LCKNNYI--ASAVWDELVSVYREFSFSPTVFDMI 192

Query: 148 IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----- 202
           +     +GM + A  VFD + +    P++ +   L+   +  G+  KA+ + ++M     
Sbjct: 193 LKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGI 252

Query: 203 ------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK 250
                         CK+G V +AF FV+ +E   C+P+V++YN L+   +++G     +K
Sbjct: 253 LPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKK 312

Query: 251 LMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC 310
           ++  M  +G+  N  TY++LI   C+ G+ E A  ++    EK L  D + Y  LI AYC
Sbjct: 313 VLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYC 372

Query: 311 KDGRLDLAIEFLDYMISDGCL-----------------------------------PDIV 335
             GR+D A+   D M+  G                                     PD  
Sbjct: 373 TAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSY 432

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            YNT+L  FCK  +  +A ++ +++ + G    V +YNT+   L+  G    AL + + M
Sbjct: 433 GYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM 492

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             +G+ P+E+TY +L+    + G  D A+ +  D  S  F  ++  YN +I GFCK  ++
Sbjct: 493 HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKL 552

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
            ++ E+   M E G  P+E TY  LI+G    G   EA++L +
Sbjct: 553 VQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 208/432 (48%), Gaps = 18/432 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPD-VF 107
           + G+ DE+  F++ M  + C+P+VV    LI  +        A +V+ ++ + G P+   
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI G+CK  Q+E A K++  +  +    D   Y ++I + C+ G ++ A ++ D +
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
           L+   K   +    LI      G  +KA ++L  M                 G CK+   
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +AF+    + ++G    V++YN LL+ L ++G  E    +   M  RG+ PN VTY  L
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           + +  + G  + A+ + + A  KG T     Y+ +I  +CK  +L  A E    M   G 
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
            PD + Y T++  +CK GN  +AL++ +     G   +   YN++ + ++ S +  +  G
Sbjct: 568 PPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           +++EM ++ + P+ +TY SLI+  C  GM+D+A      M      P +I  + I+    
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 451 KTRRINESIEVL 462
           +  +I+E+  +L
Sbjct: 688 RHGKIDEANLIL 699



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 183/419 (43%), Gaps = 59/419 (14%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+   F+ G FD ++   +  ++ G    + +   +I  F    K  K V+  E
Sbjct: 501 EVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFC---KMEKLVQAQE 557

Query: 97  ILEKYGE----PDVFAYNALISGFCK---------------------------------- 118
           I  K  E    PD   Y  LI G+CK                                  
Sbjct: 558 IFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVF 617

Query: 119 -ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
            + +++  N +L  +++R  SP+VVTY  +I   C +GM++ A+  + +++     P +I
Sbjct: 618 RSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMG-----MCKKGMVGQAFQFVRSLESRGCQ------ 226
             + ++ +    G+ D+A  +L ++            V      +R LE++         
Sbjct: 678 IGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKK 737

Query: 227 ------PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
                  + I YN+ +  L      ++  +++++++ +G  P+  TY  LI +    GK 
Sbjct: 738 AMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKV 797

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A  +       GL P+   Y+ LI+  CK G LD A    + +   G  P +V YNT+
Sbjct: 798 NEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTL 857

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
           +  +CK G   +ALE+ +K+ + G  P+  +Y+T+   L+  G   +++G+++EM+  G
Sbjct: 858 IDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 20/280 (7%)

Query: 226 QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV- 284
           +PDV SY  ++  L     ++E    + E++                 LC++     AV 
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVV----------------LCKNNYIASAVW 172

Query: 285 -DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
            +++   +E   +P  +  D ++  + + G    A+   D M   G +P + + N++L+ 
Sbjct: 173 DELVSVYREFSFSPTVF--DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSN 230

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
             +NG A +AL ++E++  +G  P++ SY  M +A    G    A   + EM     EP+
Sbjct: 231 LVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPN 290

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            +TYNSLI      G V  A  +L  M          +Y ++I G+CK  ++ ++ +++ 
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIG 350

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
            M EK    +E  Y +LI      G   +A+ + +A++ +
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 1/161 (0%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           ++   D+    +  ++  G  PD      LI       K N+A  + + +   G  P++ 
Sbjct: 758 KSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIV 817

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YNALI+G CK+  ++ A ++ ++L  +G SP VVTYN +I   C  G    A ++ D++
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
             +   P+ ITY+ LI    +EG++++++ LL+EM    KG
Sbjct: 878 REEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKG 918


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 238/554 (42%), Gaps = 88/554 (15%)

Query: 35  VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV 94
           V E  +  LI    + GK  +++   + M+  G K ++ +C  LI  + +  + ++  R+
Sbjct: 170 VDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERL 229

Query: 95  MEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
           +  + K   +PD ++Y  L+ G+C+      A  V D++  +G  P VVTYN ++  LC 
Sbjct: 230 LMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCR 289

Query: 154 RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------- 202
            G  + A +++  +L+    P  + Y  L+      G   +A+ L D++           
Sbjct: 290 FGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYA 349

Query: 203 ------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEK------ 250
                 G+CK G +  A +  + +E  GC+PD I+Y  L      +G  EE  K      
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409

Query: 251 -----------------------------LMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
                                        L+ EM +RGL PNVVTY  LI+  C  G+ +
Sbjct: 410 KEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL------DYMISDGCLPDIV 335
            A         KG  P+      ++S+  + GR+D A   L      D ++   CL D  
Sbjct: 470 KAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQ 529

Query: 336 N-----------------------------YNTILAAFCKNGNADQALEIFEKLSDVGCP 366
           N                             YN  +A  CK+G  + A   F  LS     
Sbjct: 530 NADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFT 589

Query: 367 PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
           P+  +Y T+     ++G    A  +  EM++KG+ P+  TYN+L++ LC+ G +D A  L
Sbjct: 590 PDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRL 649

Query: 427 LVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              +      P V++YNI+I G+CK+    E++++   M ++G  P+  TY  LI G   
Sbjct: 650 FDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCK 709

Query: 487 GGWRAEAMELANAL 500
                EAM+L N +
Sbjct: 710 QSDVEEAMKLLNEM 723



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 218/478 (45%), Gaps = 55/478 (11%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++K     G    +L+  ++M   G KP +  C  L+    +  +S  AV V + + +  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PDVF    +++ +CKA ++E A + +  +   GF  + V+YN ++    S G IE A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            V   +         +T T+LI+                  G CK+  V +A + +R +E
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIK------------------GYCKQCKVEEAEKVLREME 163

Query: 222 SR-GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
              G   D  +Y  L+     +GK  +  ++  EM+  GL+ N+   + LI+  C++G+ 
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +   +L   ++  L PD+YSY  L+  YC+DG    A    D M+  G  P +V YNT+
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L   C+ G+   AL ++  +   G  PN   Y T+   L+  GD  RAL +  ++L++GI
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343

Query: 401 -----------------------------------EPDEITYNSLISCLCRDGMVDEAVG 425
                                              +PD ITY +L    C+ G V+EA  
Sbjct: 344 NKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFK 403

Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +   ME     P++  YN +I+G   +++I++ I++LA M  +G  PN  TY  LI G
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAG 461



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 54/461 (11%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI  + +  K   A+RV + + K G + ++F  N+LI+G+CK  Q+    ++L  +R   
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PD  +Y  ++   C  G+   AF V DQ+LR   +PTV+TY  L++            
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLK------------ 285

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                 G+C+ G    A +    +  RG  P+ + Y  LL  L  MG +     L  +++
Sbjct: 286 ------GLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDIL 339

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
           +RG+  ++  ++ +I+ LC+ G+ + A +  +  +E G  PD  +Y  L   YCK G ++
Sbjct: 340 ARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVE 399

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A +  + M  +   P I  YN+++     +    + +++  ++   G  PNV +Y  + 
Sbjct: 400 EAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL--------- 427
           +     G   +A     EM+ KG  P+ I  + ++S L R G +DEA  LL         
Sbjct: 460 AGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLV 519

Query: 428 -------------------------VDMESTRFR-PTVISYNIIILGFCKTRRINESIEV 461
                                    +D  + +F  P  + YNI + G CK+ ++N++   
Sbjct: 520 LDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRF 579

Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
              +      P+  TY  LI G    G+  EA  L + +V+
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVN 620



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 214/453 (47%), Gaps = 20/453 (4%)

Query: 17  RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
           +V  + E       L F++    +  L+      G  + +   ++ M   G   + V  T
Sbjct: 81  KVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLT 140

Query: 77  KLIKKFFQERKSNKAVRVMEILEKYGEP--DVFAYNALISGFCKANQIELANKVLDRLRS 134
            LIK + ++ K  +A +V+  +EK      D +AY ALI G+CK  ++  A +V D +  
Sbjct: 141 LLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLK 200

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            G   ++   N +I   C  G +    ++   + + + KP   +Y  L+           
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVD---------- 250

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G C+ G+  +AF     +  +G +P V++YN LL+ L   G +++  +L   
Sbjct: 251 --------GYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHL 302

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+ RG+ PN V Y  L+  L + G    A+ +      +G+    Y+++ +I+  CK G 
Sbjct: 303 MLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGE 362

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
           +D A E    M   GC PD + Y T+   +CK GN ++A +I EK+      P++  YN+
Sbjct: 363 MDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNS 422

Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           +   L++S    + + +++EM ++G+ P+ +TY +LI+  C  G +D+A     +M    
Sbjct: 423 LIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG 482

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
           F P VI  + I+    +  RI+E+  +L  M +
Sbjct: 483 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 196/423 (46%), Gaps = 19/423 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKV 128
           PDV  C  ++  + +  K  +AV  +  +EK G E +  +YN+L+ G+     IE A  V
Sbjct: 64  PDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGV 123

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR-DNCKPTVITYTILIQATM 187
           L  +  +G   + VT  ++I   C +  +E A KV  ++ + D        Y  LI    
Sbjct: 124 LKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYC 183

Query: 188 LEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVI 230
             G+   A+++ DEM                 G CK G V +  + +  +     +PD  
Sbjct: 184 KVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSY 243

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           SY  L+      G   +   +  +M+ +G+EP VVTY+ L+  LCR G  +DA+ +    
Sbjct: 244 SYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM 303

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
            ++G+TP+   Y  L+    K G    A+   D +++ G    I  +NT++   CK G  
Sbjct: 304 LQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEM 363

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D A E F+++ ++GC P+  +Y T+       G+   A  +  +M  + I P    YNSL
Sbjct: 364 DGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSL 423

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
           I  L     + + + LL +M++    P V++Y  +I G+C   R++++      M  KG 
Sbjct: 424 IVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGF 483

Query: 471 KPN 473
            PN
Sbjct: 484 APN 486



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 183/458 (39%), Gaps = 89/458 (19%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+   F+ G F  +L   + ++A G    +     +I    +  + + A    +
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELA------------------------------ 125
            +E+ G +PD   Y  L  G+CK   +E A                              
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431

Query: 126 --NKVLDRLR---SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
             +K++D L    +RG SP+VVTY  +I   C +G ++ AF  + +++     P VI  +
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICS 491

Query: 181 ILIQATMLEGQTDKAMKLLDEM-------------------------------------- 202
            ++ +    G+ D+A  LL +M                                      
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551

Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
                         G+CK G V  A +F   L      PD  +Y  L+      G   E 
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611

Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
             L  EM+++GL PN+ TY+ L++ LC+ G  + A  +      KGL P+  +Y+ LI  
Sbjct: 612 FNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDG 671

Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
           YCK G    A++    M+ +G  P I+ Y++++  FCK  + ++A+++  ++        
Sbjct: 672 YCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQT 731

Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
           +++++ +       GD ++ +  +  M+        IT
Sbjct: 732 IATFSKLVEGCIQHGD-VKKMSKLHNMMHMACPSAGIT 768



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 27/330 (8%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYN 110
           G+ D++      M+  G  P+V++C+K++   ++  + ++A     +L+K  + D+   +
Sbjct: 466 GRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANM---LLQKMVDFDLVLDH 522

Query: 111 ALISGFCKANQIEL-ANKVLDRLRSRG--FS-PDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
             +  F  A+  +L   K+ D L      FS P+ V YNI +  LC  G +  A + F  
Sbjct: 523 RCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLG 582

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
           L   +  P   TY  LI      G  ++A  L DEM    KG+V                
Sbjct: 583 LSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEM--VNKGLV---------------- 624

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++ +YN LL  L   G  +   +L  ++  +GL PNVVTY+ILI   C+ G   +A+D+
Sbjct: 625 PNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDL 684

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                ++G++P   +Y  LI+ +CK   ++ A++ L+ M +      I  ++ ++    +
Sbjct: 685 RGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ 744

Query: 347 NGNADQALEIFEKLSDVGCP-PNVSSYNTM 375
           +G+  + +     +  + CP   ++S+  M
Sbjct: 745 HGDV-KKMSKLHNMMHMACPSAGITSHKQM 773



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 131/269 (48%), Gaps = 1/269 (0%)

Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
           M+L+     G  +    +   M   G +P++ + + L+S+L + G++  AV V    +  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
            + PD ++   +++AYCK G+++ A+EF+  M   G   + V+YN+++  +   G+ + A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEITYNSLIS 412
             + + +S+ G   N  +   +            A  ++ EM  + G+  DE  Y +LI 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
             C+ G + +A+ +  +M     +  +   N +I G+CK  +++E   +L  M +   KP
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALV 501
           +  +Y  L++G    G  ++A  + + ++
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQML 269


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 18/390 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD++  N L++ FC+  Q   A   L ++   G  PD+VT + ++   C    I+ A  V
Sbjct: 46  PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV 105

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
             Q+ +   K  V+  TILI                    +CK  +V  A + ++ ++ R
Sbjct: 106 AGQMEKMGIKRDVVVDTILIDT------------------LCKNRLVVPALEVLKRMKDR 147

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P+V++Y+ L+  L   G+  + E+ + EM S+ + PNV+T+S LI +  + GK    
Sbjct: 148 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 207

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             V +   +  + P+ ++Y  LI   C   R+D AI+ LD MIS GC P++V Y+T+   
Sbjct: 208 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 267

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
           F K+   D  +++ + +   G   N  S NT+    + +G    ALG+   M S G+ P+
Sbjct: 268 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 327

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
             +YN +++ L  +G V++A+     M+ TR    +I+Y I+I G CK   + E+ ++  
Sbjct: 328 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFY 387

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
            +  K  +P+   Y ++I  +   G R EA
Sbjct: 388 KLKFKRVEPDFKAYTIMIAELNRAGMRTEA 417



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 25/375 (6%)

Query: 56  SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALIS 114
           +L ++  M+  G +PD+V  + L+  F        AV V   +EK G + DV     LI 
Sbjct: 67  ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 126

Query: 115 GFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
             CK   +  A +VL R++ RG SP+VVTY+ +I  LC  G +  A +   ++      P
Sbjct: 127 TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 186

Query: 175 TVITYTILIQATMLEGQ---TDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
            VIT++ LI A    G+    D   K++ +M +                      P+V +
Sbjct: 187 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI---------------------DPNVFT 225

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           Y+ L+  L    + +E  K++  MIS+G  PNVVTYS L +   +  + +D + +L    
Sbjct: 226 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 285

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           ++G+  +  S + LI  Y + G++DLA+    YM S+G +P+I +YN +LA    NG  +
Sbjct: 286 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 345

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +AL  FE +       ++ +Y  M   +  +     A  +  ++  K +EPD   Y  +I
Sbjct: 346 KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405

Query: 412 SCLCRDGMVDEAVGL 426
           + L R GM  EA  L
Sbjct: 406 AELNRAGMRTEADAL 420



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 19/222 (8%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +S D     +  LI       + DE++  ++ M++ GC P+VV  + L   FF+  + + 
Sbjct: 217 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 276

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
            +++++ + + G   +  + N LI G+ +A +I+LA  V   + S G  P++ +YNI++ 
Sbjct: 277 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 336

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
            L + G +E A   F+ + +      +ITYTI+I                   GMCK  M
Sbjct: 337 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH------------------GMCKACM 378

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
           V +A+     L+ +  +PD  +Y +++  L   G   E + L
Sbjct: 379 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 420



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 38/260 (14%)

Query: 262 PNVVTYSILISSLCRDGKTEDAVDV---LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           P++V ++ +++++ +    +  +++   +  A+   ++PD Y+ + L++ +C+  +   A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
           + +L  M+  G  PDIV  ++++  FC + +   A+ +  ++  +G   +V     +   
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L  +   + AL ++  M  +GI P+ +TY+SLI+ LC+ G + +A   L +M+S +  P 
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 439 VI-----------------------------------SYNIIILGFCKTRRINESIEVLA 463
           VI                                   +Y+ +I G C   R++E+I++L 
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 464 AMFEKGCKPNETTYVLLIEG 483
            M  KGC PN  TY  L  G
Sbjct: 248 LMISKGCTPNVVTYSTLANG 267



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%)

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           PD+   N ++  FC+      AL    K+  +G  P++ + +++ +    S     A+ +
Sbjct: 46  PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV 105

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +M   GI+ D +    LI  LC++ +V  A+ +L  M+     P V++Y+ +I G CK
Sbjct: 106 AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 165

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           + R+ ++   L  M  K   PN  T+  LI+     G  ++   +   ++ M
Sbjct: 166 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 217


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 218/446 (48%), Gaps = 22/446 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G+ D++      M+  G  P +++C  +IK+  + ++ +KA  +++ +   G
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             PD+F Y+ +I G CK+  ++ A +VL+++   G  P+ +TYN +I      GM   + 
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           +VF Q+      PTV      I A    G+T++A  + D M +                 
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL----------------- 216

Query: 222 SRGCQPDVISYNMLLRTLLNMGK--WEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            +G +PD+ISY+ +L            +   +   M+++G+ PN   ++ILI++  R G 
Sbjct: 217 -KGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 275

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
            + A+ +    + KG+ PD  ++  +IS+ C+ GRLD A+   ++M+  G  P    Y  
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 335

Query: 340 ILAAFCKNGNADQALEIFEKLSDVGC-PPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
           ++   C +G   +A E+  ++ +    PP V  ++++ + L   G       ++  M+  
Sbjct: 336 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 395

Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
           G  P+ +T+NSL+   C  G ++EA  LL  M S    P    Y  ++ G+CK  RI+++
Sbjct: 396 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 455

Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGI 484
           + V   M  KG KP    Y +++ G+
Sbjct: 456 LTVFRDMLHKGVKPTSVLYSIILHGL 481



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 220/467 (47%), Gaps = 31/467 (6%)

Query: 22  AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
           A TRPN+           +  LI     +G ++ES+   + M + G  P V  C   I  
Sbjct: 147 AGTRPNS---------ITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 197

Query: 82  FFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA--NKVLDRLRSRGFS 138
            F+  ++N+A  + + ++ K  +PD+ +Y+ ++ G+  A    LA  + + + + ++G +
Sbjct: 198 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 257

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
           P+   +NI+I +    GM++ A  +F+ +      P  +T+  +I +             
Sbjct: 258 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS------------- 304

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
                +C+ G +  A      +   G  P    Y  L++   N G+  + ++L++EM+++
Sbjct: 305 -----LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 359

Query: 259 GLEPNVVTY-SILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
            + P  V Y S +I++LC++G+  +  D++    + G  P+  +++ L+  YC  G ++ 
Sbjct: 360 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 419

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
           A   LD M S G  P+   Y T++  +CKNG  D AL +F  +   G  P    Y+ +  
Sbjct: 420 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 479

Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
            L+ +     A  M  EM+  G      TY  ++  LCR+   DEA  LL  + +   + 
Sbjct: 480 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 539

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            +I++NI+I    K  R  E+ E+  A+   G  PN  TY ++I  +
Sbjct: 540 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 219/464 (47%), Gaps = 18/464 (3%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           +IK   +  + D++   ++ MV +G  PD+   + +I    + +  +KA RV+E + + G
Sbjct: 89  IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 148

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P+   YN+LI G+  +     + +V  ++ S G  P V   N  I +L   G    A 
Sbjct: 149 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 208

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
            +FD ++    KP +I+Y+     TML G        L +        V   F     + 
Sbjct: 209 CIFDSMVLKGPKPDIISYS-----TMLHGYATATDSCLAD--------VHNIFNL---ML 252

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
           ++G  P+   +N+L+      G  ++   +  +M ++G+ P+ VT++ +ISSLCR G+ +
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY-NTI 340
           DA+       + G+ P    Y  LI   C  G L  A E +  M++    P  V Y ++I
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   CK G   +  +I + +   G  PNV ++N++       G+   A  ++  M S GI
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
           EP+   Y +L+   C++G +D+A+ +  DM     +PT + Y+II+ G  + RR   + +
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
           +   M E G   +  TY +++ G+       EA  L   L +M+
Sbjct: 493 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 536



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 205/438 (46%), Gaps = 54/438 (12%)

Query: 100 KYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG---------- 149
           ++  P +  YN LI  + + ++ +L   ++ RL   G  PD  +Y+++ G          
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 67

Query: 150 ------------------------SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
                                    LC    ++ A  +  +++     P + TY+++I  
Sbjct: 68  HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
                  DKA ++L++M                 G    GM  ++ +  + + S G  P 
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS--SLCRDGKTEDAVDV 286
           V + N  +  L   G+  E + +   M+ +G +P++++YS ++   +   D    D  ++
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                 KG+ P+ + ++ LI+AY + G +D A+   + M + G +PD V + T++++ C+
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
            G  D AL  F  + D+G PP+ + Y  +     + G+ ++A  +ISEM++K I P  + 
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367

Query: 407 Y-NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAM 465
           Y +S+I+ LC++G V E   ++  M  T  RP V+++N ++ G+C    + E+  +L AM
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427

Query: 466 FEKGCKPNETTYVLLIEG 483
              G +PN   Y  L++G
Sbjct: 428 ASIGIEPNCYIYGTLVDG 445



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 219/487 (44%), Gaps = 23/487 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI----L 98
            I   F+ G+ +E+    +SMV  G KPD++  + ++  +     S  A  V  I    L
Sbjct: 194 FIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA-DVHNIFNLML 252

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K   P+   +N LI+ + +   ++ A  + + ++++G  PD VT+  +I SLC  G ++
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A   F+ ++     P+   Y  LIQ     G+  KA +L+ EM                
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372

Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              +CK+G V +    +  +   G +P+V+++N L+     +G  EE   L+  M S G+
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432

Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
           EPN   Y  L+   C++G+ +DA+ V R    KG+ P +  Y  ++    +  R   A +
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492

Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
               MI  G    I  Y  +L   C+N   D+A  + EKL  +    ++ ++N + SA++
Sbjct: 493 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 552

Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
             G +  A  +   + + G+ P+  TY+ +I+ L ++   +EA  L + +E +       
Sbjct: 553 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 612

Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
             N I+        + ++   L+ + E       +T  LL       G   E ++L  A 
Sbjct: 613 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPAN 672

Query: 501 VSMHAIS 507
           ++M  ++
Sbjct: 673 MTMAVVA 679



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 21/370 (5%)

Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
           R   P + TYNI+I         +    +  +LL++   P   +Y+ LI   + +G+ DK
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66

Query: 195 AMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
           A  L  EM                    +G  P ++  N +++ L  M + ++ E ++ +
Sbjct: 67  AHCLFLEM------------------MEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 108

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           M+  G+ P++ TYS++I  LC+    + A  VL    E G  P++ +Y+ LI  Y   G 
Sbjct: 109 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 168

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 374
            + ++     M S G +P + N N+ + A  K+G  ++A  IF+ +   G  P++ SY+T
Sbjct: 169 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 228

Query: 375 MFSALWSSGDKIRA--LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
           M     ++ D   A    + + ML+KGI P++  +N LI+   R GM+D+A+ +  DM++
Sbjct: 229 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 288

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
               P  +++  +I   C+  R+++++     M + G  P+E  Y  LI+G    G   +
Sbjct: 289 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 348

Query: 493 AMELANALVS 502
           A EL + +++
Sbjct: 349 AKELISEMMN 358


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G F++S Y ++ M  +G  P +V    ++  + ++ +   A+ +++ ++  G + DV  Y
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 306

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C++N+I     +L  +R R   P+ VTYN +I    + G +  A ++ +++L 
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P  +T+  LI   + EG   +A+K+   M                 G+CK      
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A  F   ++  G     I+Y  ++  L   G  +E   L+ EM   G++P++VTYS LI+
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G+ + A +++      GL+P+   Y  LI   C+ G L  AI   + MI +G   
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D   +N ++ + CK G   +A E    ++  G  PN  S++ + +   +SG+ ++A  + 
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM   G  P   TY SL+  LC+ G + EA   L  + +       + YN ++   CK+
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + +++ +   M ++   P+  TY  LI G+
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 226/468 (48%), Gaps = 30/468 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G+F  ++  ++ M + G   DV     LI    +  +  K   ++  + K    P+  
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF    ++ +A+++L+ + S G SP+ VT+N +I    S G  + A K+F  +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P+ ++Y +L+       + D A      M                 G+CK G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +   G  PD+++Y+ L+     +G+++  ++++  +   GL PN + YS L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + CR G  ++A+ +  A   +G T D ++++ L+++ CK G++  A EF+  M SDG 
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP+ V+++ ++  +  +G   +A  +F++++ VG  P   +Y ++   L   G    A  
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +  + +     D + YN+L++ +C+ G + +AV L  +M      P   +Y  +I G C
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699

Query: 451 KTRRINESIEVLAAMFEKGCK------PNETTYVLLIEGIGYGG-WRA 491
           +  +      V+A +F K  +      PN+  Y   ++G+   G W+A
Sbjct: 700 RKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 215/449 (47%), Gaps = 22/449 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F++ M+     PDV     LI     E    K+  +M+ +EK G  P +  YN ++  +C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  + + A ++LD ++S+G   DV TYN++I  LC    I   + +   + +    P  +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY  LI     EG+   A +LL+EM                   S G  P+ +++N L+ 
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEM------------------LSFGLSPNHVTFNALID 381

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
             ++ G ++E  K+   M ++GL P+ V+Y +L+  LC++ + + A       K  G+  
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
              +Y  +I   CK+G LD A+  L+ M  DG  PDIV Y+ ++  FCK G    A EI 
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++  VG  PN   Y+T+       G    A+ +   M+ +G   D  T+N L++ LC+ 
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V EA   +  M S    P  +S++ +I G+  +    ++  V   M + G  P   TY
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621

Query: 478 VLLIEGIGYGGWRAEAMELANALVSMHAI 506
             L++G+  GG   EA +    L S+HA+
Sbjct: 622 GSLLKGLCKGGHLREAEKF---LKSLHAV 647



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 18/429 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + +E     ++ +  ++  YG  P V+  NA++    K+ +       L  +  R 
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PDV T+NI+I  LC+ G  E +  +  ++ +    PT++TY  ++     +G+   A+
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +LLD M                  +C+   + + +  +R +  R   P+ ++YN L+   
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            N GK     +L+ EM+S GL PN VT++ LI     +G  ++A+ +    + KGLTP  
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            SY  L+   CK+   DLA  F   M  +G     + Y  ++   CKNG  D+A+ +  +
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +S  G  P++ +Y+ + +     G    A  ++  +   G+ P+ I Y++LI   CR G 
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + EA+ +   M          ++N+++   CK  ++ E+ E +  M   G  PN  ++  
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 480 LIEGIGYGG 488
           LI G G  G
Sbjct: 589 LINGYGNSG 597



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 19/403 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ LI  + +   I+ + ++   +   GF+P V T N ++GS+   G   S +    ++L
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V T+ ILI     EG  +K+  L+ +M                  E  G  P 
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKM------------------EKSGYAPT 267

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN +L      G+++   +L+  M S+G++ +V TY++LI  LCR  +      +LR
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +++ + P+  +Y+ LI+ +  +G++ +A + L+ M+S G  P+ V +N ++      G
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  +AL++F  +   G  P+  SY  +   L  + +   A G    M   G+    ITY 
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I  LC++G +DEAV LL +M      P +++Y+ +I GFCK  R   + E++  ++  
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           G  PN   Y  LI      G   EA+ +  A++ +   +RD F
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHF 549



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 219/535 (40%), Gaps = 91/535 (17%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  L+    +AGK  E+  F+  M ++G  P+ V    LI  +    +  KA  V + + 
Sbjct: 551  FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610

Query: 100  KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G  P  F Y +L+ G CK   +  A K L  L +   + D V YN ++ ++C  G + 
Sbjct: 611  KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A  +F ++++ +  P   TYT LI     +G+T  A+    E                 
Sbjct: 671  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730

Query: 203  --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              GM K G       F   +++ G  PD+++ N ++     MGK E+   L+ EM ++  
Sbjct: 731  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790

Query: 261  EPNVVTYSILISS-----------------------------------LCRDGKTEDAVD 285
             PN+ TY+IL+                                     +C     E  + 
Sbjct: 791  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850

Query: 286  VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS------------------ 327
            +L+A   +G+  D Y+++ LIS  C +G ++ A + +  M S                  
Sbjct: 851  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910

Query: 328  -----------------DGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNV 369
                              G  P+   Y  ++   C+ G+   A  + E++ +   CPPNV
Sbjct: 911  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970

Query: 370  SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +  + M  AL   G    A  ++  ML   + P   ++ +L+   C++G V EA+ L V 
Sbjct: 971  AE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029

Query: 430  MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            M +   +  ++SYN++I G C    +  + E+   M   G   N TTY  LI G+
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 10/310 (3%)

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA-FQFVRSLES-RGCQPDVISYNM 234
           IT  IL++A M     D A  +L E+ +    M G++ F F   + + R C  +   Y++
Sbjct: 117 ITTHILVRARMY----DPARHILKELSL----MSGKSSFVFGALMTTYRLCNSNPSVYDI 168

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+R  L  G  ++  ++   M   G  P+V T + ++ S+ + G+       L+   ++ 
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  +++ LI+  C +G  + +   +  M   G  P IV YNT+L  +CK G    A+
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+ + +   G   +V +YN +   L  S    +   ++ +M  + I P+E+TYN+LI+  
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +G V  A  LL +M S    P  +++N +I G        E++++   M  KG  P+E
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408

Query: 475 TTYVLLIEGI 484
            +Y +L++G+
Sbjct: 409 VSYGVLLDGL 418



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N   Y ILI    R+G  +D++++ R     G  P  Y+ + ++ +  K G       FL
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+     PD+  +N ++   C  G+ +++  + +K+   G  P + +YNT+       
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+ ++  M SKG++ D  TYN LI  LCR   + +   LL DM      P  ++Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           N +I GF    ++  + ++L  M   G  PN  T+  LI+G    G   EA+++
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G F++S Y ++ M  +G  P +V    ++  + ++ +   A+ +++ ++  G + DV  Y
Sbjct: 207 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 266

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C++N+I     +L  +R R   P+ VTYN +I    + G +  A ++ +++L 
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P  +T+  LI   + EG   +A+K+   M                 G+CK      
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A  F   ++  G     I+Y  ++  L   G  +E   L+ EM   G++P++VTYS LI+
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G+ + A +++      GL+P+   Y  LI   C+ G L  AI   + MI +G   
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D   +N ++ + CK G   +A E    ++  G  PN  S++ + +   +SG+ ++A  + 
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM   G  P   TY SL+  LC+ G + EA   L  + +       + YN ++   CK+
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + +++ +   M ++   P+  TY  LI G+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 228/468 (48%), Gaps = 30/468 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+F  ++  ++ M + G   DV     LI    +  +  K   ++ ++ ++   P+  
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF    ++ +A+++L+ + S G SP+ VT+N +I    S G  + A K+F  +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P+ ++Y +L+       + D A      M                 G+CK G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +   G  PD+++Y+ L+     +G+++  ++++  +   GL PN + YS L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + CR G  ++A+ +  A   +G T D ++++ L+++ CK G++  A EF+  M SDG 
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP+ V+++ ++  +  +G   +A  +F++++ VG  P   +Y ++   L   G    A  
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +  + +     D + YN+L++ +C+ G + +AV L  +M      P   +Y  +I G C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659

Query: 451 KTRRINESIEVLAAMFEKGCK------PNETTYVLLIEGIGYGG-WRA 491
           +  +      V+A +F K  +      PN+  Y   ++G+   G W+A
Sbjct: 660 RKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 215/449 (47%), Gaps = 22/449 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F++ M+     PDV     LI     E    K+  +M+ +EK G  P +  YN ++  +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  + + A ++LD ++S+G   DV TYN++I  LC    I   + +   + +    P  +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY  LI     EG+   A +LL+EM                   S G  P+ +++N L+ 
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEM------------------LSFGLSPNHVTFNALID 341

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
             ++ G ++E  K+   M ++GL P+ V+Y +L+  LC++ + + A       K  G+  
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
              +Y  +I   CK+G LD A+  L+ M  DG  PDIV Y+ ++  FCK G    A EI 
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++  VG  PN   Y+T+       G    A+ +   M+ +G   D  T+N L++ LC+ 
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V EA   +  M S    P  +S++ +I G+  +    ++  V   M + G  P   TY
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581

Query: 478 VLLIEGIGYGGWRAEAMELANALVSMHAI 506
             L++G+  GG   EA +    L S+HA+
Sbjct: 582 GSLLKGLCKGGHLREAEKF---LKSLHAV 607



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 18/429 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + +E     ++ +  ++  YG  P V+  NA++    K+ +       L  +  R 
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PDV T+NI+I  LC+ G  E +  +  ++ +    PT++TY  ++     +G+   A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +LLD M                  +C+   + + +  +R +  R   P+ ++YN L+   
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            N GK     +L+ EM+S GL PN VT++ LI     +G  ++A+ +    + KGLTP  
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            SY  L+   CK+   DLA  F   M  +G     + Y  ++   CKNG  D+A+ +  +
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +S  G  P++ +Y+ + +     G    A  ++  +   G+ P+ I Y++LI   CR G 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + EA+ +   M          ++N+++   CK  ++ E+ E +  M   G  PN  ++  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 480 LIEGIGYGG 488
           LI G G  G
Sbjct: 549 LINGYGNSG 557



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 19/403 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ LI  + +   I+ + ++   +   GF+P V T N ++GS+   G   S +    ++L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V T+ ILI     EG  +K+  L+ +M                  E  G  P 
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKM------------------EKSGYAPT 227

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN +L      G+++   +L+  M S+G++ +V TY++LI  LCR  +      +LR
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +++ + P+  +Y+ LI+ +  +G++ +A + L+ M+S G  P+ V +N ++      G
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  +AL++F  +   G  P+  SY  +   L  + +   A G    M   G+    ITY 
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I  LC++G +DEAV LL +M      P +++Y+ +I GFCK  R   + E++  ++  
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           G  PN   Y  LI      G   EA+ +  A++ +   +RD F
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHF 509



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/571 (23%), Positives = 234/571 (40%), Gaps = 97/571 (16%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  L+    +AGK  E+  F+  M ++G  P+ V    LI  +    +  KA  V + + 
Sbjct: 511  FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 100  KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G  P  F Y +L+ G CK   +  A K L  L +   + D V YN ++ ++C  G + 
Sbjct: 571  KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A  +F ++++ +  P   TYT LI     +G+T  A+    E                 
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 203  --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              GM K G       F   +++ G  PD+++ N ++     MGK E+   L+ EM ++  
Sbjct: 691  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750

Query: 261  EPNVVTYSILISS-----------------------------------LCRDGKTEDAVD 285
             PN+ TY+IL+                                     +C     E  + 
Sbjct: 751  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810

Query: 286  VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS------------------ 327
            +L+A   +G+  D Y+++ LIS  C +G ++ A + +  M S                  
Sbjct: 811  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870

Query: 328  -----------------DGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNV 369
                              G  P+   Y  ++   C+ G+   A  + E++ +   CPPNV
Sbjct: 871  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930

Query: 370  SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +  + M  AL   G    A  ++  ML   + P   ++ +L+   C++G V EA+ L V 
Sbjct: 931  AE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989

Query: 430  MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI----- 484
            M +   +  ++SYN++I G C    +  + E+   M   G   N TTY  LI G+     
Sbjct: 990  MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049

Query: 485  GYGGWRAEAME-LANALVSMHAISRDTFKRL 514
             + G      + LA   ++  ++S+D+ + L
Sbjct: 1050 AFSGADIILKDLLARGFITSMSLSQDSHRNL 1080



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 10/310 (3%)

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA-FQFVRSLES-RGCQPDVISYNM 234
           IT  IL++A M     D A  +L E+ +    M G++ F F   + + R C  +   Y++
Sbjct: 77  ITTHILVRARMY----DPARHILKELSL----MSGKSSFVFGALMTTYRLCNSNPSVYDI 128

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+R  L  G  ++  ++   M   G  P+V T + ++ S+ + G+       L+   ++ 
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  +++ LI+  C +G  + +   +  M   G  P IV YNT+L  +CK G    A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+ + +   G   +V +YN +   L  S    +   ++ +M  + I P+E+TYN+LI+  
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +G V  A  LL +M S    P  +++N +I G        E++++   M  KG  P+E
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 475 TTYVLLIEGI 484
            +Y +L++G+
Sbjct: 369 VSYGVLLDGL 378



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N   Y ILI    R+G  +D++++ R     G  P  Y+ + ++ +  K G       FL
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+     PD+  +N ++   C  G+ +++  + +K+   G  P + +YNT+       
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+ ++  M SKG++ D  TYN LI  LCR   + +   LL DM      P  ++Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           N +I GF    ++  + ++L  M   G  PN  T+  LI+G    G   EA+++
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 19/399 (4%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD  +Y  +   +C+  +I   ++ L  +  RGF  D  T  +MI + C +G     F  
Sbjct: 229 PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWY 288

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           FD+ +    KP +I +T LI                   G+CK+G + QAF+ +  +  +
Sbjct: 289 FDKWVELGLKPNLINFTSLIN------------------GLCKRGSIKQAFEMLEEMVKK 330

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTED 282
           G +P+V ++  L+  L   G  E+  +L  +++ S   +PNV TY+ +I   C++ K   
Sbjct: 331 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNR 390

Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
           A  +L   KE+GL P+  +Y  LI  + K G  + A E +D M  +G   +I  YN  + 
Sbjct: 391 AEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFID 450

Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
           + CK G   +A ++ +K   +G   +  +Y  + S L    D   AL   S+M   G++P
Sbjct: 451 SLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQP 510

Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
           D  TYN+LI+   R   ++E+  L  +       PT  +Y  +I G+C+ R ++ +++  
Sbjct: 511 DMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFF 570

Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
             M + GC P+  TY  LI G+       EA +L  A+V
Sbjct: 571 NRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMV 609



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 219/442 (49%), Gaps = 28/442 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
           R G+  ++  +++ MV  G   D   CT +I  F ++     A RV    +K+ E    P
Sbjct: 243 RMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEK---GFASRVFWYFDKWVELGLKP 299

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           ++  + +LI+G CK   I+ A ++L+ +  +G+ P+V T+  +I  LC +G  E AF++F
Sbjct: 300 NLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 359

Query: 165 DQLLR-DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
            +L+R D+ KP V TYT +I     E + ++A  LL  M                 G  K
Sbjct: 360 LKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSK 419

Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
            G   +A++ +  +   G   ++ +YN  + +L   G++ E  KL+ +    GL+ + VT
Sbjct: 420 AGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVT 479

Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
           Y+ILIS LCR   T +A+       + G+ PD ++Y+ LI+A+ +  R++ + +     +
Sbjct: 480 YTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAV 539

Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
             G +P    Y +++  +C++ N   AL+ F ++SD GC P+  +Y  + S L       
Sbjct: 540 GLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLD 599

Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            A  +   M+ KG+ P E+T  +L    C+    D++   +V +E    +  + + N +I
Sbjct: 600 EACQLYEAMVDKGLSPCEVTRLTLAYEYCKQ---DDSATAMVILERLDKKLWIRTVNTLI 656

Query: 447 LGFCKTRRINESIEVLAAMFEK 468
              C  R++  ++     + +K
Sbjct: 657 RKLCSERKVGMAVLFFHKLLDK 678



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
           +C    +G    F R+ E   C         ++R    +GK++E   ++ EM + GL   
Sbjct: 146 VCATSFIGNE-NFERAHEVMDC---------MVRVFAEIGKFQEAVNMVIEMENHGLVLT 195

Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           V T + +       G    A +V    + +G+ PD+ SY  +  AYC+ GR+     +L 
Sbjct: 196 VRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLK 255

Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
            M+  G + D      +++ FC+ G A +    F+K  ++G  PN+ ++ ++ + L   G
Sbjct: 256 DMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRG 315

Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISY 442
              +A  M+ EM+ KG +P+  T+ +LI  LC+ G  ++A  L + +  S  ++P V +Y
Sbjct: 316 SIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTY 375

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
             +I G+CK  ++N +  +L+ M E+G  PN  TY  LI+G    G   +A EL + L+ 
Sbjct: 376 TSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMD-LMG 434

Query: 503 MHAISRDTF 511
               S + F
Sbjct: 435 KEGFSANIF 443


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 231/514 (44%), Gaps = 65/514 (12%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  L+     AG   E++     M A+ C PD  +   ++    +  ++ +A  ++E   
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EP++  YNALI G+C A ++E A KV + +     SP+V TY  +I  LC  G +E
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +F +++    +P V+TYT LIQ    EG    A +LL  M                
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
             +CK+  V +A  F+ SL  +G + + + Y  L+  L   GK +  ++LM +MIS G  
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGL-------------------------- 295
           P+  +YS LI  LCR  K   A  +L    EKG+                          
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 296 ---------TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                     PD  +Y   + +YC++GR++ A   +  M+  G  P++V YNT++  +  
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW--SSGDKIRALGMISEMLSKGIEPDE 404
            G   QA   FE +   G  PN  SY  +   +   SS D    +  I++M    +  ++
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564

Query: 405 IT----------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           IT          Y+  I CLCR   ++EA    + M++    P+   Y  II   C+ + 
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
           + +++ +L +M + G  P+  +Y ++I  +  GG
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGG 658



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 194/417 (46%), Gaps = 21/417 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           PD +AY + + G+C+A  +  A +V   +  RG      TY  ++  L   GM+  A  V
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAM-------------------KLLDEMGM 204
           F  +  D+C P    Y  ++      G+T++A                     L+D  G 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID--GY 222

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A +    ++   C P+V +Y  L+  L   GK E    L + M+  GLEPNV
Sbjct: 223 CNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
           VTY+ LI   C +G  + A  +L   +  GL P+ +++  LI A CK  +++ A  FL  
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           ++  G   + V Y +++   CK G  D A E+ +K+   G  P+  SY+++   L     
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             +A  M+ +M+ KGI+   +TY  +I  L R+   +    +   M +T   P +++Y +
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            +  +C+  R+ ++  ++  M ++G  PN  TY  LI G    G  ++A      +V
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 223/490 (45%), Gaps = 30/490 (6%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F+     +  LI     AG+ + +L   E M  N C P+V   T+LI    +  K  +A+
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 93  RVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +   + + G EP+V  Y ALI G C    ++ A ++L  + + G  P+  T++++I +L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C R  +E A      L++   K   + YT LI      G+ D A +L+ +M         
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G+C++  + QA   +  +  +G Q   ++Y +++  L+     E  +K+  +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447

Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           MI+ G+ P++VTY++ + S C +G+ EDA  ++    ++G+ P+  +Y+ LI  Y   G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 315 LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF------------EKLSD 362
           +  A    + M+  G  P+  +Y  +L    K  ++D +++I+            E +++
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567

Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
              P     Y+     L        A      M +  + P E  Y S+I C CR  ++ +
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTD 627

Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
           A+ LL  M  + + P + SY III   C+      + EV   +  K    +E  + +LI 
Sbjct: 628 ALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIY 687

Query: 483 GIGYGGWRAE 492
           G+   G  AE
Sbjct: 688 GLLQKGSVAE 697



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 173/374 (46%), Gaps = 18/374 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y  LI+ +C A  I  A + L  L   G +PD   Y   +   C  GM+  A +VF  + 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
              C  T  TYT L+                   G+   GMV +A      + +  C PD
Sbjct: 135 LRGCLRTAFTYTALLH------------------GLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
              Y  ++  L   G+ EE E L+ E +S G EPN+V Y+ LI   C  G+ E A+ V  
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
                  +P+  +Y  LI   CK G+++ A+     M+  G  P++V Y  ++   C  G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           +   A  +   +   G  PN  +++ +  AL        A   +  ++ KG++ +E+ Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
           SLI  LC+ G +D A  L+  M S  F P   SY+ +I G C+ ++++++  +L  M EK
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 469 GCKPNETTYVLLIE 482
           G + +  TY ++I+
Sbjct: 417 GIQASPVTYTIIID 430



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%)

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C  G +  A Q + SL   G  PD  +Y   +      G      ++   M  RG     
Sbjct: 83  CLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTA 142

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            TY+ L+  L   G   +A+ V    +     PD + Y  ++   C+ GR + A   L+ 
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
            +S+G  P+IV YN ++  +C  G  + AL++FE +    C PNV +Y  +   L  SG 
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK 262

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
             RA+ + S M+  G+EP+ +TY +LI   C +G +  A  LL  ME+    P   ++++
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSV 322

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
           +I   CK  ++ E+   L ++ +KG K NE  Y  LI+G+   G    A EL   ++S
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 202/464 (43%), Gaps = 65/464 (14%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           + +LI    ++GK + ++     MV  G +P+VV  T LI+    E     A R++ ++E
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 100 KYG----------------------EPDVF--------------AYNALISGFCKANQIE 123
             G                      E  +F               Y +LI G CK  +I+
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
            A++++ ++ S GF PD  +Y+ +I  LC +  +  A  + + ++    + + +TYTI+I
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
              + E  ++   K+ D+M                   C++G +  A   +  +  RG  
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P++++YN L+R   N+G   +       M+ +G +PN  +Y++L+  + +   ++++VD+
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549

Query: 287 LRAA------------KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
            + A             E+ L   A  Y   I   C+  RL+ A  F   M +    P  
Sbjct: 550 WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSE 609

Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
             Y +I+   C+      AL + + ++  G  P++ SY  + S+L   G+   A  +  +
Sbjct: 610 DVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGD 669

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           +L K    DEI +  LI  L + G V E   LL  M+   ++P+
Sbjct: 670 LLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 122/266 (45%), Gaps = 4/266 (1%)

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
           R L      P +   N LL  L     + + E L + M +R    N+ TY+ LI++ C  
Sbjct: 30  RVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLA 85

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
           G    A   L +    GL PD+Y+Y   +  YC+ G L  A      M   GCL     Y
Sbjct: 86  GDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTY 145

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
             +L      G   +A+ +F  +    C P+   Y TM   L  +G    A  ++ E +S
Sbjct: 146 TALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMS 205

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
            G EP+ + YN+LI   C  G ++ A+ +   M+  R  P V +Y  +I G CK+ ++  
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEG 483
           ++ + + M E G +PN  TY  LI+G
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQG 291



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%)

Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
           +Y  LI+AYC  G +  A + L  ++  G  PD   Y + +  +C+ G    A  +F  +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
              GC     +Y  +   L  +G    A+ +   M +    PD   Y +++  LC  G  
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
           +EA  LL +  S  F P ++ YN +I G+C    +  +++V   M    C PN  TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 481 IEGIGYGGWRAEAMELANALV 501
           I G+   G    AM L + +V
Sbjct: 254 IHGLCKSGKVERAMVLFSRMV 274



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP +   NT+L A  ++    +     E L+      N+ +Y T+ +A   +GD   A  
Sbjct: 38  LPPLRCLNTLLMALARH----RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQ 93

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            ++ +L  G+ PD   Y S +   CR GM+  A  + V M       T  +Y  ++ G  
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
               + E++ V   M    C P+   Y  ++ G+   G
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAG 191


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 210/431 (48%), Gaps = 23/431 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI+    A   D ++  +  M  +G +P+VV+ + L+  + +  +     +V E + 
Sbjct: 132 YGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS 191

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G EPDV  Y ALI   C+  +++ A +V+D +  RG  P+VVTYN++I S+C  G + 
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
            A  +   +     +P V+TY  LI       + D+AM LL+EM                
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS 311

Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
              G+CK G + QA Q    +   GC+ +++++N+L+  LL + K ++  +LM EM S G
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           L+P+  TYSILI+  C+  + E A   L   + +G+ P+   Y PL+ A C  G +  A 
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR 431

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
           +  + M    C  D   Y+T++    K+G    A E  + + D G  P+  +Y+   +  
Sbjct: 432 DLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMF 490

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES--TRFRP 437
             SGD   A  ++ +M + G  PD   ++SLI      G  ++ + L  +M +      P
Sbjct: 491 AKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDP 550

Query: 438 TVISYNIIILG 448
            +IS  +  LG
Sbjct: 551 KIISTIVTSLG 561



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 185/349 (53%), Gaps = 23/349 (6%)

Query: 140 DVVTYNIMIGSLCSRGMIESAF---KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
           D V+YN ++ +LC +G +++A    +V     R   +P  I+YT L++A           
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRA----------- 103

Query: 197 KLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                  +C      QA   +RS++  G +PDV++Y  L+R L +    +   +L+ EM 
Sbjct: 104 -------LCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 257 SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             G+EPNVV YS L+   C+ G+ E    V      +G+ PD   Y  LI + C+ G++ 
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A   +D M   G  P++V YN ++ + CK G+  +AL++ + +S+ G  P+V +YNT+ 
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 377 SALWSSGDKIRALGMISEMLS--KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
           + L S  +   A+ ++ EM+     + PD +T+NS+I  LC+ G + +A+ +   M    
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336

Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            R  ++++N++I G  +  ++ +++E++  M   G +P+  TY +LI G
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 221/459 (48%), Gaps = 59/459 (12%)

Query: 49  RAGKFDESLYFIESMVAN---GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EP 104
           R G  D +L+ +  M        +P+ +  T L++    +R++ +AV ++  ++  G  P
Sbjct: 68  RQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRP 127

Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
           DV  Y  LI G C A  ++ A ++L+ +   G  P+VV Y+ ++   C  G  ES  KVF
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF 187

Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKK 207
           +++     +P V+ YT LI +    G+  KA +++D M                  MCK+
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247

Query: 208 GMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS---------- 257
           G V +A    +++  +G QPDV++YN L+  L ++ + +E   L+ EM+           
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLM 307

Query: 258 ---------------------------RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
                                       G   N+V +++LI  L R  K + A++++   
Sbjct: 308 TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
              GL PD+++Y  LI+ +CK  +++ A  +L  M   G  P+ V+Y  +L A C  G  
Sbjct: 368 ASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
            QA ++F ++ D  C  + ++Y+TM    + SG+K  A   + +M+ +G+ PD +TY+  
Sbjct: 428 GQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIP 486

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGF 449
           I+   + G +  A  +L  M ++ F P V  ++ +I G+
Sbjct: 487 INMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 147/274 (53%), Gaps = 5/274 (1%)

Query: 228 DVISYNMLLRTLLNMGKWEEGE---KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
           D +SYN +L  L   G  +      ++M+        PN ++Y+ L+ +LC D +   AV
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
            +LR+ ++ G+ PD  +Y  LI   C    +D A+E L+ M   G  P++V Y+ +L  +
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
           CK G  +   ++FE++S  G  P+V  Y  +  +L   G   +A  ++  M  +G+EP+ 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
           +TYN LI+ +C++G V EA+ L  +M     +P V++YN +I G      ++E++ +L  
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 465 MF--EKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           M   E   +P+  T+  +I G+   GW  +A+++
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 224/460 (48%), Gaps = 22/460 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K  F A    E++   ++MV +G  P V   + L+  F ++R  +  + ++  +E  G
Sbjct: 181 LVKSGFDA----EAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARG 236

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +P+V++Y   I    +A + + A  +L ++   G  PDVVT+ ++I  LC  G +  A 
Sbjct: 237 VKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAK 296

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
            VF ++   + KP  +TY  L+      G +   +++ + M                  +
Sbjct: 297 AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDAL 356

Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
           C+ G V +A      ++ +G  P+  SYN L+   L    ++   +L   M + G  PN 
Sbjct: 357 CQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 416

Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
            T+ + I+   + G++  A+      K KG+ PD  + + ++ +    GRL +A      
Sbjct: 417 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYE 476

Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
           + + G  PD + Y  ++    K   AD+A+  F  + + GC P+V + N++   L+  G 
Sbjct: 477 LKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536

Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
              A  +  ++    IEP   TYN+L+S L R+G V E + LL +M  T + P +I+YN 
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           ++    K   +N +I++L +M EKGC P+ ++Y  ++ G+
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGL 636



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 214/460 (46%), Gaps = 19/460 (4%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
           D  L+ +  M A G KP+V   T  I+   Q  + ++A  ++  +E  G +PDV  +  +
Sbjct: 223 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVI 282

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I   C A ++  A  V  ++++    PD VTY  ++      G  +S  +V++ ++ D  
Sbjct: 283 IQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY 342

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
              +++YT ++ A    G+ D+A+ + DEM                 G  K  M  +A +
Sbjct: 343 NDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALE 402

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
               + + G  P+  ++ + +      G+  +  +    M S+G+ P+V   + ++ SL 
Sbjct: 403 LFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLA 462

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             G+   A  V    K  G++PD  +Y  +I    K  + D A+ F   M+  GC+PD++
Sbjct: 463 GSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVL 522

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
             N+++    K G  ++A ++F KL ++   P   +YNT+ S L   G     + ++ EM
Sbjct: 523 ALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
                 P+ ITYN+++ CL ++G V+ A+ +L  M      P + SYN ++ G  K  R+
Sbjct: 583 TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERL 642

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            E+  +   M +K   P+  T   ++      G   EA+ 
Sbjct: 643 EEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALH 681



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 201/414 (48%), Gaps = 22/414 (5%)

Query: 87  KSNKAVRVMEILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
           KS      ME+ +   E    P V  Y+ L+  F K   ++    +L+ + +RG  P+V 
Sbjct: 183 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVY 242

Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
           +Y I I  L      + A+ +  ++    CKP V+T+T++IQ                  
Sbjct: 243 SYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQV----------------- 285

Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
            +C  G +  A      +++   +PD ++Y  LL    + G  +   ++   M++ G   
Sbjct: 286 -LCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYND 344

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N+V+Y+ ++ +LC+ G+ ++A+ V    KEKG++P+ YSY+ LIS + K    D A+E  
Sbjct: 345 NIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELF 404

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
           ++M + G  P+   +   +  + K+G + +A++ +E +   G  P+V++ N +  +L  S
Sbjct: 405 NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGS 464

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A  +  E+ + G+ PD ITY  +I C  +    DEA+    DM  +   P V++ 
Sbjct: 465 GRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLAL 524

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           N +I    K  + NE+ ++   + E   +P   TY  L+ G+G  G   E M+L
Sbjct: 525 NSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQL 578



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 237/575 (41%), Gaps = 105/575 (18%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR------ 93
            +  +IK   +A K DE++ F   MV +GC PDV+    LI   ++  K N+A +      
Sbjct: 489  YTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLK 548

Query: 94   --------------------------VMEILEKYGE----PDVFAYNALISGFCKANQIE 123
                                      VM++LE+       P++  YN ++    K  ++ 
Sbjct: 549  EMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVN 608

Query: 124  LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL---------------- 167
             A  +L  +  +G +PD+ +YN ++  L     +E AF++F Q+                
Sbjct: 609  CAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILP 668

Query: 168  -------------------LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG----- 203
                               L+  C     ++  L++  + +   +K+++  + +      
Sbjct: 669  SFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGIL 728

Query: 204  ------------MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
                        +CK     +A Q     +  G      SYN L+R L++    +  E L
Sbjct: 729  LNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDL 788

Query: 252  MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 311
             TEM   G  P+  TY++++ ++ +  + E+ + V +    KG      +Y+ +IS   K
Sbjct: 789  FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVK 848

Query: 312  DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 371
              RL+ AI+    ++S+G  P    Y  +L    K+G    A  +F ++ + GC PN + 
Sbjct: 849  SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTI 908

Query: 372  YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
            YN + +    +G+      +  +M+ +GI PD  +Y  LI  LC  G +++ +     + 
Sbjct: 909  YNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLH 968

Query: 432  STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI---------- 481
                 P +I YN++I G  K+ RI E++ +   M +KG  PN  TY  LI          
Sbjct: 969  ELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAA 1028

Query: 482  ------EGIGYGGWRAEAMELANALVSMHAISRDT 510
                  E +   GW+       NAL+  +++S  T
Sbjct: 1029 EAAQMYEELLRKGWKPSVFTY-NALIRGYSVSGST 1062



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 238/552 (43%), Gaps = 90/552 (16%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
           ++ L+ +   +G     +    +MVA+G   ++V  T ++    Q  + ++A+ V  E+ 
Sbjct: 314 YITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMK 373

Query: 99  EKYGEPDVFAYNALISGFCKANQ----IELANKV-------------------------- 128
           EK   P+ ++YN+LISGF KA+     +EL N +                          
Sbjct: 374 EKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSL 433

Query: 129 -----LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
                 + ++S+G  PDV   N ++ SL   G +  A +VF +L      P  ITYT++I
Sbjct: 434 KAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMI 493

Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
           +      + D+AM    +M                  + K G   +A+Q    L+    +
Sbjct: 494 KCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIE 553

Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
           P   +YN LL  L   GK +E  +L+ EM      PN++TY+ ++  L ++G+   A+D+
Sbjct: 554 PTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDM 613

Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
           L +  EKG  PD  SY+ ++    K+ RL+ A      M      PD     TIL +F K
Sbjct: 614 LYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVK 672

Query: 347 NGNADQALE-IFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI----- 400
           NG   +AL  + E +   GC  + SS++++   +       +++     + S+GI     
Sbjct: 673 NGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDF 732

Query: 401 ----------------EPDEI--------------TYNSLISCLCRDGMVDEAVGLLVDM 430
                           E  ++              +YNSLI  L  + ++D A  L  +M
Sbjct: 733 FLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM 792

Query: 431 ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWR 490
           +     P   +YN+I+    K+ R+ E ++V   M  KG +    TY  +I G+      
Sbjct: 793 KRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRL 852

Query: 491 AEAMELANALVS 502
            +A++L   L+S
Sbjct: 853 EQAIDLYYNLMS 864



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 196/434 (45%), Gaps = 20/434 (4%)

Query: 49   RAGKFDESLYFI-ESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDV 106
            + G   E+L+ + E ++  GC  D      L++   ++    K++   E +   G   + 
Sbjct: 672  KNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLND 731

Query: 107  FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            F    LI   CK  +   A+++ ++ +  G S    +YN +I  L    +I+ A  +F +
Sbjct: 732  FFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTE 791

Query: 167  LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
            + R  C P   TY ++                LD MG  K   V +  +  + +  +G +
Sbjct: 792  MKRLGCGPDEFTYNLI----------------LDAMG--KSMRVEEMLKVQKEMHRKGYE 833

Query: 227  PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
               ++YN ++  L+   + E+   L   ++S G  P   TY  L+  L + GK  DA ++
Sbjct: 834  STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENL 893

Query: 287  LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
                 E G  P+   Y+ L++ +   G  +   +  + M+  G  PDI +Y  ++   C 
Sbjct: 894  FNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCT 953

Query: 347  NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
             G  +  L  F +L ++G  P++  YN +   L  S     A+ + +EM  KGI P+  T
Sbjct: 954  AGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYT 1013

Query: 407  YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
            YNSLI  L + G   EA  +  ++    ++P+V +YN +I G+  +   + +      M 
Sbjct: 1014 YNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMI 1073

Query: 467  EKGCKPNETTYVLL 480
              GC+PN +TY+ L
Sbjct: 1074 VGGCQPNSSTYMQL 1087



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 35/305 (11%)

Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
           S N +L  +   G+  +  ++   M  + ++ NV T++ +   +  +G    A   L   
Sbjct: 103 SCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVM 162

Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
           +E G++ +AY+Y+ LI    K G    A+E    M+ DG  P +  Y+ ++ AF K  + 
Sbjct: 163 REAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDV 222

Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
           D  L +  ++   G  PNV SY      L  +     A  ++ +M   G +PD +T+  +
Sbjct: 223 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVI 282

Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRP--------------------------------- 437
           I  LC  G + +A  +   M+++  +P                                 
Sbjct: 283 IQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY 342

Query: 438 --TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
              ++SY  ++   C+  R++E++ V   M EKG  P + +Y  LI G         A+E
Sbjct: 343 NDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALE 402

Query: 496 LANAL 500
           L N +
Sbjct: 403 LFNHM 407



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 22/279 (7%)

Query: 16   VRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC 75
            +RV    + +   H   ++     +  +I    ++ + ++++    ++++ G  P     
Sbjct: 815  MRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTY 874

Query: 76   TKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRS 134
              L+    +  K   A  +   + +YG EP+   YN L++G   A   E   ++ +++  
Sbjct: 875  GPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVE 934

Query: 135  RGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDK 194
            +G +PD+ +Y I+I +LC+ G +      F QL     +P +I Y +LI       + ++
Sbjct: 935  QGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEE 994

Query: 195  AMKLLDEMGMCKKGMVGQAF-------------------QFVRSLESRGCQPDVISYNML 235
            A+ L +EM   KKG++   +                   Q    L  +G +P V +YN L
Sbjct: 995  AVSLFNEMK--KKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNAL 1052

Query: 236  LRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
            +R     G  +       +MI  G +PN  TY  L + L
Sbjct: 1053 IRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 18/452 (3%)

Query: 51  GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
           G F++S Y ++ M  +G  P +V    ++  + ++ +   A+ +++ ++  G + DV  Y
Sbjct: 207 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 266

Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           N LI   C++N+I     +L  +R R   P+ VTYN +I    + G +  A ++ +++L 
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P  +T+  LI   + EG   +A+K+   M                 G+CK      
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
           A  F   ++  G     I+Y  ++  L   G  +E   L+ EM   G++P++VTYS LI+
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
             C+ G+ + A +++      GL+P+   Y  LI   C+ G L  AI   + MI +G   
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
           D   +N ++ + CK G   +A E    ++  G  PN  S++ + +   +SG+ ++A  + 
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
            EM   G  P   TY SL+  LC+ G + EA   L  + +       + YN ++   CK+
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             + +++ +   M ++   P+  TY  LI G+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 228/468 (48%), Gaps = 30/468 (6%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
           + G+F  ++  ++ M + G   DV     LI    +  +  K   ++ ++ ++   P+  
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN LI+GF    ++ +A+++L+ + S G SP+ VT+N +I    S G  + A K+F  +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                 P+ ++Y +L+       + D A      M                 G+CK G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A   +  +   G  PD+++Y+ L+     +G+++  ++++  +   GL PN + YS L
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + CR G  ++A+ +  A   +G T D ++++ L+++ CK G++  A EF+  M SDG 
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           LP+ V+++ ++  +  +G   +A  +F++++ VG  P   +Y ++   L   G    A  
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
            +  + +     D + YN+L++ +C+ G + +AV L  +M      P   +Y  +I G C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659

Query: 451 KTRRINESIEVLAAMFEKGCK------PNETTYVLLIEGIGYGG-WRA 491
           +  +      V+A +F K  +      PN+  Y   ++G+   G W+A
Sbjct: 660 RKGK-----TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 215/449 (47%), Gaps = 22/449 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFC 117
           F++ M+     PDV     LI     E    K+  +M+ +EK G  P +  YN ++  +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
           K  + + A ++LD ++S+G   DV TYN++I  LC    I   + +   + +    P  +
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
           TY  LI     EG+   A +LL+EM                   S G  P+ +++N L+ 
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEM------------------LSFGLSPNHVTFNALID 341

Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTP 297
             ++ G ++E  K+   M ++GL P+ V+Y +L+  LC++ + + A       K  G+  
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401

Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
              +Y  +I   CK+G LD A+  L+ M  DG  PDIV Y+ ++  FCK G    A EI 
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461

Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRD 417
            ++  VG  PN   Y+T+       G    A+ +   M+ +G   D  T+N L++ LC+ 
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521

Query: 418 GMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTY 477
           G V EA   +  M S    P  +S++ +I G+  +    ++  V   M + G  P   TY
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581

Query: 478 VLLIEGIGYGGWRAEAMELANALVSMHAI 506
             L++G+  GG   EA +    L S+HA+
Sbjct: 582 GSLLKGLCKGGHLREAEKF---LKSLHAV 607



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 18/429 (4%)

Query: 78  LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
           LI+ + +E     ++ +  ++  YG  P V+  NA++    K+ +       L  +  R 
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
             PDV T+NI+I  LC+ G  E +  +  ++ +    PT++TY  ++     +G+   A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
           +LLD M                  +C+   + + +  +R +  R   P+ ++YN L+   
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
            N GK     +L+ EM+S GL PN VT++ LI     +G  ++A+ +    + KGLTP  
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            SY  L+   CK+   DLA  F   M  +G     + Y  ++   CKNG  D+A+ +  +
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
           +S  G  P++ +Y+ + +     G    A  ++  +   G+ P+ I Y++LI   CR G 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
           + EA+ +   M          ++N+++   CK  ++ E+ E +  M   G  PN  ++  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 480 LIEGIGYGG 488
           LI G G  G
Sbjct: 549 LINGYGNSG 557



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 19/403 (4%)

Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
           Y+ LI  + +   I+ + ++   +   GF+P V T N ++GS+   G   S +    ++L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
           +    P V T+ ILI     EG  +K+  L+ +M                  E  G  P 
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKM------------------EKSGYAPT 227

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
           +++YN +L      G+++   +L+  M S+G++ +V TY++LI  LCR  +      +LR
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             +++ + P+  +Y+ LI+ +  +G++ +A + L+ M+S G  P+ V +N ++      G
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
           N  +AL++F  +   G  P+  SY  +   L  + +   A G    M   G+    ITY 
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
            +I  LC++G +DEAV LL +M      P +++Y+ +I GFCK  R   + E++  ++  
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
           G  PN   Y  LI      G   EA+ +  A++ +   +RD F
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHF 509



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 219/535 (40%), Gaps = 91/535 (17%)

Query: 40   FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
            F  L+    +AGK  E+  F+  M ++G  P+ V    LI  +    +  KA  V + + 
Sbjct: 511  FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 100  KYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            K G  P  F Y +L+ G CK   +  A K L  L +   + D V YN ++ ++C  G + 
Sbjct: 571  KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 159  SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
             A  +F ++++ +  P   TYT LI     +G+T  A+    E                 
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 203  --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
              GM K G       F   +++ G  PD+++ N ++     MGK E+   L+ EM ++  
Sbjct: 691  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750

Query: 261  EPNVVTYSILISS-----------------------------------LCRDGKTEDAVD 285
             PN+ TY+IL+                                     +C     E  + 
Sbjct: 751  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810

Query: 286  VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMIS------------------ 327
            +L+A   +G+  D Y+++ LIS  C +G ++ A + +  M S                  
Sbjct: 811  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870

Query: 328  -----------------DGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNV 369
                              G  P+   Y  ++   C+ G+   A  + E++ +   CPPNV
Sbjct: 871  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930

Query: 370  SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
            +  + M  AL   G    A  ++  ML   + P   ++ +L+   C++G V EA+ L V 
Sbjct: 931  AE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989

Query: 430  MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
            M +   +  ++SYN++I G C    +  + E+   M   G   N TTY  LI G+
Sbjct: 990  MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 10/310 (3%)

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQA-FQFVRSLES-RGCQPDVISYNM 234
           IT  IL++A M     D A  +L E+ +    M G++ F F   + + R C  +   Y++
Sbjct: 77  ITTHILVRARMY----DPARHILKELSL----MSGKSSFVFGALMTTYRLCNSNPSVYDI 128

Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
           L+R  L  G  ++  ++   M   G  P+V T + ++ S+ + G+       L+   ++ 
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
           + PD  +++ LI+  C +G  + +   +  M   G  P IV YNT+L  +CK G    A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
           E+ + +   G   +V +YN +   L  S    +   ++ +M  + I P+E+TYN+LI+  
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
             +G V  A  LL +M S    P  +++N +I G        E++++   M  KG  P+E
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 475 TTYVLLIEGI 484
            +Y +L++G+
Sbjct: 369 VSYGVLLDGL 378



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%)

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           N   Y ILI    R+G  +D++++ R     G  P  Y+ + ++ +  K G       FL
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+     PD+  +N ++   C  G+ +++  + +K+   G  P + +YNT+       
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
           G    A+ ++  M SKG++ D  TYN LI  LCR   + +   LL DM      P  ++Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
           N +I GF    ++  + ++L  M   G  PN  T+  LI+G    G   EA+++
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 228/500 (45%), Gaps = 27/500 (5%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEIL 98
           F  LI+   R G   ++L     M   G  P V  C  L+ K  +ERK     +   E+L
Sbjct: 101 FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEML 160

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
            +   PDV  +N LI+  C   +++ A  +L ++   G+ P VVTYN ++   C +G  +
Sbjct: 161 ARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYK 220

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
           +A ++ DQ+     +    TY +L+       ++ K   LL +M                
Sbjct: 221 AALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSII 280

Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G  K+G +G A +  + +      P+ ++YN L+    + G +E+   ++  M + G +
Sbjct: 281 NGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPK 340

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
           PN V+YS L++ LCR  K E +  +L   +  G+     +Y  +I   C++G L+ +++ 
Sbjct: 341 PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKL 400

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
           LD M+ DG +PD+V ++ ++  FC+ G      EI  K+   G  PN   Y T+      
Sbjct: 401 LDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCK 460

Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
           +GD + A  +   M   G + +    N L+S LC+DG V  A      M      P  I+
Sbjct: 461 TGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSIT 520

Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL- 500
           ++ II G+  +    ++  +   M + G  P+  TY  L++ +   G   EA  L + L 
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580

Query: 501 --------VSMHAISRDTFK 512
                   V+ + I  +TFK
Sbjct: 581 YIPSAVDTVTYNTILVETFK 600



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 200/407 (49%), Gaps = 23/407 (5%)

Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
           P VF  + LI  + +   +  A +    +  RGF+P V T N+++G L     + + +  
Sbjct: 98  PSVF--DLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
           F ++L     P V T+ ILI    +EG+  KA  LL +M                  E  
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKM------------------EES 197

Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
           G  P V++YN +L      G+++   +L+ +M S+G+E +  TY++L+  LC++ ++   
Sbjct: 198 GYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKG 257

Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
             +L+  +++ ++P+  +Y+ +I+ + K+G++  A      M     LP+ V YN ++  
Sbjct: 258 YLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDG 317

Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
            C +GN +QAL I E +   G  PN  SY+ + + L        +  ++  M   G+   
Sbjct: 318 HCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVG 377

Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
            I Y ++I  LCR+G+++E+V LL  M      P V++++++I GFC+  +I    E++ 
Sbjct: 378 CIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIIC 437

Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
            M++ G  PN   Y  LI      G   EA ++    V+M  I  D 
Sbjct: 438 KMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV---YVAMSRIGYDA 481



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 217/465 (46%), Gaps = 19/465 (4%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           + G++  +L  I+ M + G + D      L+    +  +S K   +++ + K    P+  
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            YN++I+GF K  +I  A ++   +      P+ VTYN +I   C  G  E A  + + +
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
                KP  ++Y+ L+       + + +  +L+ M                 G+C+ G++
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            ++ + +  +   G  PDV+++++L+     +GK +  ++++ +M   GL PN + Y+ L
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I + C+ G   +A  V  A    G   + +  + L+S+ CKDG++ +A  F  +M   G 
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           +P+ + ++ I+  +  +GN  +A  +F+++   G  P+  +Y  +  AL  +G    A  
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKR 574

Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
           ++ ++       D +TYN+++    + GM+ +AV L  +M      P   +Y II  G  
Sbjct: 575 LLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634

Query: 451 KTRRINESIEVLAAMFEKGC-KPNETTYVLLIEGIGYGGWRAEAM 494
           +  ++  ++     +  KG   P +  Y   ++G+   G    A+
Sbjct: 635 RRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAAL 679



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 196/450 (43%), Gaps = 21/450 (4%)

Query: 37  ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
           E  +  L+    R  KF+ S   +E M  NG     +  T +I    +    N++V++++
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 97  ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
            + K G  PDV  ++ LI+GFC+  +I+   +++ ++   G +P+ + Y  +I + C  G
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
            +  AFKV+  + R           +L+ +                  +CK G VG A  
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSS------------------LCKDGKVGVAEY 504

Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
           F   +   G  P+ I+++ ++    N G   +   +  EMI  G  P+  TY  L+ +LC
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
           R GK ++A  +L          D  +Y+ ++    K G L  A+   D M+    LPD  
Sbjct: 565 RAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGC-PPNVSSYNTMFSALWSSGDKIRALGMISE 394
            Y  I A   + G    AL  +  L   G   P    Y T    L+ +G    AL    +
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCED 684

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES-TRFRPTVISYNIIILGFCKTR 453
           M   G+  D I  N +++   R G + +A  +   M S     P++ +YNI++ G+ K +
Sbjct: 685 MEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKK 744

Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEG 483
            +++   +   M   G  P++ T   LI G
Sbjct: 745 NLSKCSNLYNIMMRTGIFPDKLTCHSLILG 774



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 18/330 (5%)

Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
           CK     + +LI+  +                  ++GMVG A +  R +  RG  P V +
Sbjct: 94  CKSNPSVFDLLIRVYL------------------REGMVGDALETFRLMGIRGFNPSVYT 135

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
            NMLL  L+   K         EM++R + P+V T++ILI+ LC +GK + A  +L+  +
Sbjct: 136 CNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKME 195

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           E G  P   +Y+ +++ YCK GR   A+E +D M S G   D   YN ++   CKN  + 
Sbjct: 196 ESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSA 255

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           +   + +K+      PN  +YN++ +     G    A  +  EM    + P+ +TYN+LI
Sbjct: 256 KGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALI 315

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              C DG  ++A+ +L  ME+T  +P  +SY+ ++ G C+  +   S  +L  M   G  
Sbjct: 316 DGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMI 375

Query: 472 PNETTYVLLIEGIGYGGWRAEAMELANALV 501
                Y  +I+G+   G   E+++L + ++
Sbjct: 376 VGCIAYTAMIDGLCRNGLLNESVKLLDKML 405



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 207/478 (43%), Gaps = 20/478 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+    + GK   + YF   M   G  P+ +    +I  +       KA  + + + K G
Sbjct: 489 LVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAG 548

Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P  F Y  L+   C+A + + A ++LD+L     + D VTYN ++      GM+  A 
Sbjct: 549 HHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAV 608

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------------G 203
            +FD++++ N  P   TY I+    +  G+   A+     +                  G
Sbjct: 609 ALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDG 668

Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR-GLEP 262
           + + G    A  F   +E  G   D+I+ N++L     MGK  +   + T M S   + P
Sbjct: 669 LFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISP 728

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           ++ TY+IL+    +        ++       G+ PD  +   LI  +CK   LD+ ++ L
Sbjct: 729 SLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLL 788

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
             M+ DG   D   +N ++  +C+     +A ++   ++     P++++++++ S L   
Sbjct: 789 KKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRV 848

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
                +  ++ EML +G  PD   Y +L++ +CR G +  A  L  +ME+       ++ 
Sbjct: 849 STVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAE 908

Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
           + ++ G  K  ++ E+  VL  M  K   P   T+  L+          EA++L + +
Sbjct: 909 SALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTM 966



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/517 (23%), Positives = 214/517 (41%), Gaps = 55/517 (10%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
           R G  +ES+  ++ M+ +G  PDVV  + LI  F +  K      ++  + K G  P+  
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449

Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
            Y  LI  +CK   +  A KV   +   G+  +    N+++ SLC  G +  A   F  +
Sbjct: 450 IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHM 509

Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
            +    P  IT+  +I      G   KA  + DEM                  +C+ G  
Sbjct: 510 SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
            +A + +  L       D ++YN +L      G   +   L  EM+ R + P+  TY+I+
Sbjct: 570 KEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAII 629

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKG-LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
            + L R GK   A+        KG ++P+   Y   +    + G+   A+ F + M  +G
Sbjct: 630 FAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNG 689

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRA 388
              D++  N IL  + + G   +A +IF  + S +   P++++YN +        +  + 
Sbjct: 690 LCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKC 749

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
             + + M+  GI PD++T +SLI   C+  M+D  + LL  M          ++N++I+ 
Sbjct: 750 SNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMK 809

Query: 449 FCKT-----------------------------------RRINESIEVLAAMFEKGCKPN 473
           +C+T                                     + ES  +L  M E+GC P+
Sbjct: 810 YCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPD 869

Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDT 510
              Y+ L+  +   G    A +L + + ++   S D 
Sbjct: 870 RRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDV 906



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 149/308 (48%), Gaps = 6/308 (1%)

Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           IT  IL++A + E      +K L +MG+  K + G A      L    C+ +   +++L+
Sbjct: 52  ITTHILVRARLYE-NAKSILKHLSQMGVGSKSVFG-ALMNTYPL----CKSNPSVFDLLI 105

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
           R  L  G   +  +    M  RG  P+V T ++L+  L ++ K        +    + + 
Sbjct: 106 RVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVC 165

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           PD  +++ LI+  C +G+L  A   L  M   G +P +V YNT+L  +CK G    ALE+
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALEL 225

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
            +++   G   +  +YN +   L  +    +   ++ +M  + I P+EITYNS+I+   +
Sbjct: 226 IDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVK 285

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
           +G +  A  +  +M      P  ++YN +I G C      +++ +L  M   G KPNE +
Sbjct: 286 EGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVS 345

Query: 477 YVLLIEGI 484
           Y  L+ G+
Sbjct: 346 YSALLNGL 353



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 162/366 (44%), Gaps = 19/366 (5%)

Query: 36   KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
            ++  +   +   FRAG+   +LYF E M  NG   D++    ++  + +  K  KA  + 
Sbjct: 658  EKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIF 717

Query: 96   EILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCS 153
             ++       P +  YN L+ G+ K   +   + + + +   G  PD +T + +I   C 
Sbjct: 718  TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCK 777

Query: 154  RGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM--------- 204
              M++   K+  ++L D       T+ +LI       +  KA  L++ M +         
Sbjct: 778  SAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTT 837

Query: 205  --------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 256
                     +   V ++   +  +  RGC PD   Y  L+  +  MG      KL  EM 
Sbjct: 838  HDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEME 897

Query: 257  SRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
            + G+    V  S L+  L + GK E+A  VL     K L P   ++  L+  +C++  L 
Sbjct: 898  ALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLV 957

Query: 317  LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
             A++  D M       D++ YN +++  C +G+   AL++++++   G  PN+++Y  + 
Sbjct: 958  EALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017

Query: 377  SALWSS 382
             A++++
Sbjct: 1018 DAIFTN 1023



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%)

Query: 365 CPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
           C  N S ++ +       G    AL     M  +G  P   T N L+  L ++  V    
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
               +M + R  P V ++NI+I   C   ++ ++  +L  M E G  P+  TY  ++   
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 485 GYGGWRAEAMELANALVS 502
              G    A+EL + + S
Sbjct: 214 CKKGRYKAALELIDQMGS 231


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 206/433 (47%), Gaps = 18/433 (4%)

Query: 70  PDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKV 128
           PDV+ C  L+    + R+   A +V  E+ ++    D ++   L+ G C   ++E+  K+
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 129 LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATML 188
           ++    +G  P++V YN +IG  C  G IE+A+ VF +L      PT+ T+  +I     
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 189 EGQ---TDKAMKLLDEMGM--------------CKKGMVGQAFQFVRSLESRGCQPDVIS 231
           EG    +D+ +  + E G+               + G      + +  + +  C+PDV +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
           YN+L+  L   GK E     + E   +GL PN ++Y+ LI + C+  + + A  +L    
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
           E+G  PD  +Y  LI      G +D A+     +I  G  PD   YN +++  CK G   
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            A  +F ++ D    P+   Y T+      SGD   A  + S  + KG++ D + +N++I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
              CR GM+DEA+  +  M      P   +Y+ II G+ K + +  +I++   M +  CK
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587

Query: 472 PNETTYVLLIEGI 484
           PN  TY  LI G 
Sbjct: 588 PNVVTYTSLINGF 600



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 214/463 (46%), Gaps = 23/463 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           L+K     GK +     IE     GC P++V    +I  + +      A  V + L+  G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
             P +  +  +I+GFCK      ++++L  ++ RG    V   N +I +    G      
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG---------Q 212
           +    ++ ++CKP V TY ILI     EG+ + A+  LDE    KKG++          Q
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS--KKGLIPNNLSYAPLIQ 388

Query: 213 AF----------QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
           A+          + +  +  RGC+PD+++Y +L+  L+  G  ++   +  ++I RG+ P
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448

Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
           +   Y++L+S LC+ G+   A  +     ++ + PDAY Y  LI  + + G  D A +  
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508

Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
              +  G   D+V++N ++  FC++G  D+AL    ++++    P+  +Y+T+       
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568

Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
            D   A+ +   M     +P+ +TY SLI+  C  G    A     +M+     P V++Y
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628

Query: 443 NIIILGFCK-TRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
             +I    K +  + +++     M    C PNE T+  L++G 
Sbjct: 629 TTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 227/475 (47%), Gaps = 31/475 (6%)

Query: 38  TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMC----TKLIKKFFQERKSNKAVR 93
           + F+KL+ R +R   F+E    IE ++ N    +V +     + ++  + +    +KAV 
Sbjct: 103 SSFLKLLAR-YRI--FNE----IEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVE 155

Query: 94  VME-ILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
           + + ++E Y   PDV A N+L+S   K+ ++  A KV D +  RG S D  +  I++  +
Sbjct: 156 IYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C+ G +E   K+ +      C P ++ Y  +I                   G CK G + 
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIG------------------GYCKLGDIE 257

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
            A+   + L+ +G  P + ++  ++      G +   ++L++E+  RGL  +V   + +I
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
            +  R G   D  + +         PD  +Y+ LI+  CK+G+ ++A+ FLD     G +
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
           P+ ++Y  ++ A+CK+   D A ++  ++++ GC P++ +Y  +   L  SG    A+ M
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             +++ +G+ PD   YN L+S LC+ G    A  L  +M      P    Y  +I GF +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
           +   +E+ +V +   EKG K +   +  +I+G    G   EA+   N +   H +
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 211/488 (43%), Gaps = 37/488 (7%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLI-KKFFQERKSNKAVRVMEIL 98
           F  +I    + G F  S   +  +   G +  V     +I  K+    K + A  +  I+
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
               +PDV  YN LI+  CK  + E+A   LD    +G  P+ ++Y  +I + C     +
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM----KLLDE------------- 201
            A K+  Q+    CKP ++TY ILI   ++ G  D A+    KL+D              
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457

Query: 202 MGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
            G+CK G    A      +  R   PD   Y  L+   +  G ++E  K+ +  + +G++
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517

Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
            +VV ++ +I   CR G  ++A+  +    E+ L PD ++Y  +I  Y K   +  AI+ 
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577

Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
             YM  + C P++V Y +++  FC  G+   A E F+++      PNV +Y T+  +L  
Sbjct: 578 FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637

Query: 382 SGDKI-RALGMISEMLSKGIEPDEITYNSLISCLCR----------DGMVDEAVGLLVD- 429
               + +A+     M++    P+E+T+N L+    +          DG       L  + 
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEF 697

Query: 430 ---MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGY 486
              M+S  +     +YN  ++  C    +  +      M +KG  P+  ++  ++ G   
Sbjct: 698 FHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCV 757

Query: 487 GG----WR 490
            G    WR
Sbjct: 758 VGNSKQWR 765


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 237/480 (49%), Gaps = 23/480 (4%)

Query: 39  QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           QF  ++    +   +  ++     +  NG KP +V  T L+  +           ++  +
Sbjct: 12  QFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKI 71

Query: 99  EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
            K G EP+   +  LI G C   Q   A    D + + GF  D V+Y I++  LC  G  
Sbjct: 72  LKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGET 131

Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
            +A     Q+LR     T +   +++ +T+++              +CK   V  A++  
Sbjct: 132 RAAM----QMLRK----TWVNADVVMYSTIIDS-------------LCKGKFVTDAYRLY 170

Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
             + ++G  P+V ++++L+  L    K ++   L+  M+ +G++PNVVTY  ++   C  
Sbjct: 171 SEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLV 230

Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
            +   A+++     ++G+ P+ + Y+ +I+  CK  R+D A+     M      PD+V Y
Sbjct: 231 NQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTY 290

Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
           N ++   CK G    +LE+ +++  +G   ++ +YN++  AL  +    +A+ ++ E+  
Sbjct: 291 NILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD 350

Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
           +GI+P+  TY +LI  LC+DG +++A  +  ++ +  +  TV +YN++I G CK    +E
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410

Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRT 517
           ++ +L+ M +  C P+  +Y  +I  +   G   +  +L  A++ +  +S+   K++N T
Sbjct: 411 ALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMI-VRGLSKRLKKKVNMT 469



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 196/387 (50%), Gaps = 19/387 (4%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           + ++     F  LIK     G+  E+L F + +VA+G K D V    L+    +  ++  
Sbjct: 74  MGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRA 133

Query: 91  AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
           A++++   + +   DV  Y+ +I   CK   +  A ++   + ++G  P+V T++I++ +
Sbjct: 134 AMQMLR--KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDA 191

Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
           LC     + A  +   +++   KP V+TY  ++    L  Q +KA+ + + M        
Sbjct: 192 LCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPN 251

Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
                    G+CKK  V +A    + +  +   PDV++YN+L+  L  +GK     +L+ 
Sbjct: 252 VWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVD 311

Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
           EM S G   +++TY+ L+ +LC++   + A+ +++  K++G+ P+  +Y  LI   CKDG
Sbjct: 312 EMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDG 371

Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
           RL+ A      ++++G    +  YN ++   CK G  D+AL +  ++ D  C P+  SY 
Sbjct: 372 RLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYE 431

Query: 374 TMFSALWSSGDKIRALGMISEMLSKGI 400
           T+  AL   G+ ++   ++  M+ +G+
Sbjct: 432 TIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 196/408 (48%), Gaps = 49/408 (12%)

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
           +P ++ +N ++ SL       +A  +F QL  +  KP+++T TIL+      G       
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
           +L ++                 GMC  G   +A  F   + + G + D +SY +L+  L 
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 241 NMGK-----------WEEGE---------------------KLMTEMISRGLEPNVVTYS 268
            MG+           W   +                     +L +EMI++G+ PNV T+S
Sbjct: 127 KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
           IL+ +LC+D K + A+++L    +KG+ P+  +Y  ++  YC   +++ A+   + M+ +
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
           G  P++  YN I+   CK    D+A+ +F+++      P+V +YN +   L   G    +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306

Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
           L ++ EM S G   D ITYNSL+  LC++  +D+A+ L+ +++    +P V +Y  +I G
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366

Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
            CK  R+ ++  +   +  +G      TY ++I G+   G   EA+ L
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 1/190 (0%)

Query: 14  ERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVV 73
           ++ RV  +       H    +     +  LI    + GK   SL  ++ M + G   D++
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDII 323

Query: 74  MCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
               L+    +    ++A+  V EI ++  +P+V  Y  LI G CK  ++E A  +   +
Sbjct: 324 TYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEI 383

Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQT 192
            + G+   V TYN+MI  LC +G+ + A  +  ++  + C P  ++Y  +I A   +G+T
Sbjct: 384 LTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGET 443

Query: 193 DKAMKLLDEM 202
            K  KLL  M
Sbjct: 444 VKTNKLLCAM 453



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 1/115 (0%)

Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
           ML     P  + +N +++ L +      A+ L   +E    +P++++  I++  +C T  
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
           I     +L  + + G +PN  T+  LI+G+   G   EA+   + +V+ H    D
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVA-HGFKLD 114


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 223/490 (45%), Gaps = 53/490 (10%)

Query: 31  LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
           +  D     +  +I   F++G+  E+      MV  G   D+V CT ++   F+  K+ +
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444

Query: 91  AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
           A  V E + K    P+   Y+AL+ G+CK  ++ELA  VL ++      P+V+T++ +I 
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504

Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
               +GM+  A  V  ++++ N  P  I Y ILI      G+ D A    D+        
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVA----DD-------- 552

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSI 269
                 F + ++SR  +   + +++LL  L  +G+ +E   L+ +M S+G++P++V Y+ 
Sbjct: 553 ------FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI    ++G    A+ +++  KEK +  D  +Y+ LI    + G+ D        MI  G
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELG 665

Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRAL 389
             PD + YNTI+  +C  G  + AL+I  ++   G  PN  +YN +   L  +       
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT------- 718

Query: 390 GMISEMLSKGIEPDEITYNSLISCLCRDGMVDE---------AVGL--------LVDMES 432
                    G  P  IT+  L+    R    D+         A GL        L +M  
Sbjct: 719 ---------GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVK 769

Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
                 +++YN +I G+C    + ++++  + MF  G  PN TTY  L+ G+   G   E
Sbjct: 770 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 829

Query: 493 AMELANALVS 502
            ME    LVS
Sbjct: 830 MMEETEKLVS 839



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 20/400 (5%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERK-SNKAVRVMEILEKYGEPDVFAYNAL 112
           +ES    + M+ NG  PDVV C+ ++  F +  K +  AV   E+ E   +P+  +Y  +
Sbjct: 338 EESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATI 397

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           I+   K+ ++  A  +  ++  RG S D+VT   ++  L   G  + A +VF+ +L+ N 
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 457

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISY 232
            P  +TY+ L+                   G CK G +  A   ++ +E     P+VI++
Sbjct: 458 APNCVTYSALLD------------------GYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
           + ++      G   +   ++ EM+ R + PN + Y+ILI    + G+ + A D  +  K 
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559

Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
           + L      +D L++   + GR+D A   +  M S G  PDIVNY +++  + K GN   
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619

Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
           AL I +++ +     +V +YN +   L   G K     + S M+  G+ PD ITYN++I+
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLG-KYDPRYVCSRMIELGLAPDCITYNTIIN 678

Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
             C  G  ++A+ +L +M+S    P  ++YNI+I G CKT
Sbjct: 679 TYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 37/488 (7%)

Query: 34  DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
           D+    +  +I    + G  D+    +  MV  G   D + C  L+K + +      A  
Sbjct: 159 DIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEW 218

Query: 94  VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
           VM  L   G   DV   N LI G+C+A  +  A ++++         D+VTYN ++ + C
Sbjct: 219 VMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFC 278

Query: 153 SRGMIESAFKVFDQLL---RD----------------NCKPTVITYTILIQATMLEGQTD 193
             G +  A  +F+++L   +D                N +PT++TYT LI A       +
Sbjct: 279 KTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338

Query: 194 KAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
           ++  L  +M                 G C+ G + +A    R +   G  P+ +SY  ++
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
            +L   G+  E   L ++M+ RG+  ++VT + ++  L + GKT++A +V     +  L 
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
           P+  +Y  L+  YCK G+++LA   L  M  +   P+++ +++I+  + K G   +A+++
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
             ++      PN   Y  +    + +G++  A     EM S+ +E   + ++ L++ L R
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 417 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
            G +DEA  L++DM S    P +++Y  +I G+ K      ++ ++  M EK  + +   
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA 638

Query: 477 YVLLIEGI 484
           Y  LI+G+
Sbjct: 639 YNALIKGL 646



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 228/519 (43%), Gaps = 96/519 (18%)

Query: 28  THL-LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 86
           THL +SF      F  LI+      +F  +      M A G  P +     L+ +F    
Sbjct: 55  THLYVSF------FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQF---- 104

Query: 87  KSNKAVRVMEILEKYGE-------PDVFAYNALISGFCKANQIELANKVLDRLRSRGF-S 138
             N +  V ++   Y +       PDVF+ N L+   CK   ++LA   L  LR+     
Sbjct: 105 --NASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA---LGYLRNNDVVD 159

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
            D VTYN +I   C +G+++  F +  ++++       IT  IL++              
Sbjct: 160 IDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVK-------------- 205

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G C+ G+V  A   + +L   G   DVI  N L+          +  +L+      
Sbjct: 206 ----GYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRS 261

Query: 259 GLEPNVVTYSILISSLCRDG----------------KTEDAV---DVLRAAKEKGLTPDA 299
            ++ ++VTY+ L+ + C+ G                K ED +   DV+   + K L P  
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
            +Y  LI+AYCK   ++ +      MI +G +PD+V  ++IL  FC++G   +A  +F +
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE------------------ 401
           + ++G  PN  SY T+ ++L+ SG  + A  + S+M+ +GI                   
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 402 -----------------PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
                            P+ +TY++L+   C+ G ++ A  +L  ME     P VI+++ 
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           II G+ K   ++++++VL  M ++   PN   Y +LI+G
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 162/372 (43%), Gaps = 68/372 (18%)

Query: 49  RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKYGEPDVF 107
           R G+ DE+   I  M + G  PD+V    LI  +F+E     A+  V E+ EK    DV 
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637

Query: 108 AYNALISG----------------------------------FCKANQIELANKVLDRLR 133
           AYNALI G                                  +C   + E A  +L+ ++
Sbjct: 638 AYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMK 697

Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
           S G  P+ VTYNI+IG LC  G +                PT IT+  L++A     + D
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGFV----------------PTPITHKFLVKAYSRSEKAD 741

Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRS------LESRGCQPDVISYNMLLRTLLNMGKWEE 247
           K +++ ++       +V    +  R       +  RG   D+++YN L+R        E+
Sbjct: 742 KILQIHEK-------LVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 794

Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDG----KTEDAVDVLRAAKEKGLTPDAYSYD 303
             K  ++M   G+ PN+ TY+ L+  L   G      E+   ++    E+GL P+A +YD
Sbjct: 795 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 854

Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
            L+S Y + G     I     MI+ G +P +  YN +++ + K+G   +A E+   L   
Sbjct: 855 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 914

Query: 364 GCPPNVSSYNTM 375
           G  PN  +Y+ +
Sbjct: 915 GRIPNSFTYDIL 926


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 209/421 (49%), Gaps = 22/421 (5%)

Query: 79  IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
           I+K  +     +A  ++E ++  G  PDV ++  LI GF K+   +     LDR+   G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
            P+ + YN +I  LC  GM+  A + + + +  +C P V++Y I+I              
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIID------------- 106

Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
                G CK   + +A  F+R +E  G  P   +Y+ ++++    G   +   +  EM +
Sbjct: 107 -----GYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPA 161

Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
           +G EP++V +++L+S L R  K  +A ++ R+   +G  PD  +Y+ +I+  CK  +LD 
Sbjct: 162 KGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDE 221

Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT--M 375
           A+  L+ M  +   P  V Y T++   CK     QA E+FEK+++  CP    +Y+   +
Sbjct: 222 AVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLIL 281

Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
            + L  +     A  M  EM  +GI P  +TYN+L+  L     + +A+ L   M     
Sbjct: 282 INGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVP 341

Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
            P + +Y I+I   CKT ++ E+ ++L+AM +KG  P+   + +L+  +   G   +A E
Sbjct: 342 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 401

Query: 496 L 496
           L
Sbjct: 402 L 402



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 212/461 (45%), Gaps = 20/461 (4%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI+  F++G F      ++ M+  G  P+ ++   LI    +     +A   ++ + ++ 
Sbjct: 35  LIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC 94

Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
            P+V +YN +I G+CKA  IE A   L  +   G  P    Y+ ++ S C  G +  A  
Sbjct: 95  APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMD 154

Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
           VF ++    C+P ++ + +L+                   G+ +   + +A +  RS+ S
Sbjct: 155 VFAEMPAKGCEPDIVNFNVLLS------------------GLWRARKIHEARELFRSMNS 196

Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
           RGC+PDV++YN ++  L    K +E   L+  M    + P  VTY+ LI  LC+  + + 
Sbjct: 197 RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQ 256

Query: 283 AVDVLRAAKEKGL--TPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
           A +V     E     T  AYS   LI+  CK  R   A E    M   G  P +V YNT+
Sbjct: 257 AYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 316

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           L           A+E+   + D    PN+ +Y  + S+L  +     A  ++S M  KG 
Sbjct: 317 LEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 376

Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
            P    +  L+S L R G +D+A  L  +M     +  V S NI++ G  +   ++E+ +
Sbjct: 377 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 436

Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
            L  M + G  P++ TY  L+ G+ + G   +A +L   LV
Sbjct: 437 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 477



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 182/358 (50%), Gaps = 18/358 (5%)

Query: 44  IKRSF-RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           I +SF + G   +++     M A GC+PD+V    L+   ++ RK ++A  +   +   G
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
            +PDV  YN +I+G CK  +++ A  +L+R++    SP  VTY  +I  LC    ++ A+
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
           +VF+++    C  T   Y++LI                   G+CK    G+A +  + + 
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILIN----------------GLCKARRPGEAKEMFQEMR 302

Query: 222 SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTE 281
            RG  P V++YN LL  LL+  K ++  +L   M+ +   PN+ TY ILISSLC+  + E
Sbjct: 303 GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVE 362

Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
           +A  +L A ++KG  P    ++ L+S   + GRLD A E    M    C   + + N +L
Sbjct: 363 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILL 422

Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
               + G+ D+A +  ++++D G  P+  +Y+ +   L   G   +A  ++ E++  G
Sbjct: 423 DGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 38/183 (20%)

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
           QA  I E++   G  P+V S+  +    + SG   R    +  ML  G+ P+ I YN+LI
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 412 SCLCRDGM----------------------------------VDEAVGLLVDMESTRFRP 437
           SCLC+ GM                                  +++A+  L +ME     P
Sbjct: 72  SCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP 131

Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
           T  +Y+ I+  FCKT  ++++++V A M  KGC+P+   + +L+ G+    WRA  +  A
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL----WRARKIHEA 187

Query: 498 NAL 500
             L
Sbjct: 188 REL 190


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 222/468 (47%), Gaps = 38/468 (8%)

Query: 54  DESLY-FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYG-EPDVFAYN 110
           D ++Y  I    A G +P       LI       + ++AV     +E ++G  P  F YN
Sbjct: 120 DAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYN 179

Query: 111 ALISGF-CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
           A++         + LA  + +R+ + G  P+  TYN++I  LC RG    A K+FD+++ 
Sbjct: 180 AVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMIS 239

Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
               P V T+TIL+ +    GQ  +A  LL  M                 G+CK G V +
Sbjct: 240 RGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDE 299

Query: 213 AFQFVRSLESRGC-QPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG-LEPNVVTYSIL 270
           A + + +L   G     +  Y+ L+  L   G++EEG +   E++ +  + P++V Y+I+
Sbjct: 300 AIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIM 359

Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
           I      G+T DA       KEKG TPD + Y+ L+ A C  G LD A   +  M+ +  
Sbjct: 360 IRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNV 419

Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
           + DI  Y T++   CK    D+A+++F+ + +VGC P+V +YN +   L+ +  ++    
Sbjct: 420 VLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRA-HRLEEAR 478

Query: 391 MISEMLSKGIEP--------------DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
           M+   +  G  P              D  T   L+  +C+ G V +A  LL  +  +   
Sbjct: 479 MLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVV 538

Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
           P V++YN ++ G CK R ++ ++ +   +  KG   +E TY  LI+ +
Sbjct: 539 PDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSL 586



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 203/479 (42%), Gaps = 84/479 (17%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           LI    + G   ++L   + M++ G  P+V   T L+       +  +A  ++  +E  G
Sbjct: 217 LIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKG 276

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRG-FSPDVVTYNIMIGSLCSRGMIESA 160
             PD   YNA +SG CKA +++ A + L+ LR  G F   +  Y+ +I  L   G  E  
Sbjct: 277 CPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEG 336

Query: 161 FKVFDQLL-RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
           F+ + ++L + +  P ++ YTI+I+     G+T+ A    DEM                 
Sbjct: 337 FQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEM----------------- 379

Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
            + +G  PD   YN LL+ L + G  +    LM+EM+   +  ++ TY+ +I  LC++  
Sbjct: 380 -KEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438

Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLI--------------------------------- 306
            ++A+ V     E G  P   +Y+ LI                                 
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTL 498

Query: 307 ---------------SAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
                           + C+ G++  A + L  +I  G +PD+V YNT+L   CK  N D
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLD 558

Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
            AL +F +L   G P +  +Y T+  +L  +     AL +  ++L  G  P    YNS++
Sbjct: 559 GALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMM 618

Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
             LCR   + +A+ L  D    +       YN++          +E I      FE+GC
Sbjct: 619 RSLCRMQKLSQAINLWFDHLPRK-------YNLLAQ--------DEVISSARKKFEEGC 662



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 195/456 (42%), Gaps = 38/456 (8%)

Query: 50  AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE--PDVF 107
           AG+  E+   + SM   GC PD V     +    +  + ++A+  +E L   G     + 
Sbjct: 259 AGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLK 318

Query: 108 AYNALISGFCKANQIELANKV-LDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
            Y+ LI G   A + E   +  ++ L     SPD+V Y IMI      G    AF  FD+
Sbjct: 319 GYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDE 378

Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGM 209
           +      P    Y  L++A    G  D A  L+ EM                 G+CK+ +
Sbjct: 379 MKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438

Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM---------ISRGL 260
           V +A Q    +   GC P V++YN+L+  L    + EE   L  +M         +   L
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTL 498

Query: 261 EPNVV----TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
             N V    T   L+ S+C+ G+   A  +LR   + G+ PD  +Y+ L++  CK   LD
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLD 558

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
            A+     +   G   D + Y T++ +  +    + AL +F+ +   G  P++  YN+M 
Sbjct: 559 GALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMM 618

Query: 377 SALWSSGDKIRALGMISEMLSKG---IEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
            +L       +A+ +  + L +    +  DE+  ++       +G + EAV  L+ ++  
Sbjct: 619 RSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKK--FEEGCLHEAVRELIKIDQE 676

Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
                   Y I ++G  +  RI +++++   + E G
Sbjct: 677 YGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESG 712



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 39/269 (14%)

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAY-CKDGRLD 316
           GL+P    +  LI +    G+  +AV+   R   E G  P  + Y+ ++       G + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 317 LAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
           LA+   + M++ GCLP+   YN ++   CK G    AL++F+++   G  PNV ++  + 
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV------------ 424
           S++ ++G    A  ++  M  KG  PDE+TYN+ +S LC+ G VDEA+            
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 425 --GL-----LVD------------------MESTRFRPTVISYNIIILGFCKTRRINESI 459
             GL     L+D                  +E     P ++ Y I+I G  +  R N++ 
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
                M EKG  P+   Y  L++ +   G
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKALCDAG 402



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIR 387
           G  P    +  ++ A    G   +A+E F ++  + GC P    YN +   L +SG  + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 388 -ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
            AL + + M++ G  P+  TYN LI  LC+ G   +A+ L  +M S    P V ++ I++
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
              C   ++ E+  +L +M +KGC P+E TY   + G+   G   EA+E   AL
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEAL 307



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 20/280 (7%)

Query: 54  DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNAL 112
           + SL+   ++ AN  + D     KL++   Q  +  KA +++  I++    PDV  YN L
Sbjct: 489 NPSLFLRLTLGANQVR-DSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTL 547

Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
           ++G CK   ++ A ++   L+ +GF  D +TY  +I SL        A  +F  +L    
Sbjct: 548 LNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGG 607

Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ--AFQFVRSLESRGCQPDVI 230
            P++  Y  ++++     +  +A+ L  +    K  ++ Q       R     GC  + +
Sbjct: 608 TPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAV 667

Query: 231 ----------------SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
                            Y + L  L+  G+ E+  K+   +   G++        L   L
Sbjct: 668 RELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYL 727

Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
           C +G    AVDV+    +KG T   Y  + L+ + C   R
Sbjct: 728 CLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHR 767


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 250/576 (43%), Gaps = 115/576 (19%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
           ++ R  + G    ++   E M   G  PD      + K + + +    A+  +E + K G
Sbjct: 214 ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMG 273

Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIM-------------- 147
            E ++ AY+A+++G+C+  Q   A ++LD L  RGFSP++VTY ++              
Sbjct: 274 VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAE 333

Query: 148 ----------------------IGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
                                 I   C  G +E A ++ ++++    +  +  Y I+I  
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMING 393

Query: 186 TMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPD 228
               G+  +A  +L EM                 G CKKG++ +AF+   ++   G    
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT 453

Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
            ++YN LL+   ++G  ++  +L   M+ +G+ PN ++ S L+    + GKTE A+++ +
Sbjct: 454 TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWK 513

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
               +GL  +  +++ +I+  CK  R+  A E +D M    C PDI+ Y T+ + +CK G
Sbjct: 514 ETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIG 573

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFS------------------------------- 377
           + D+A  I  +L ++G  P +  +N++ +                               
Sbjct: 574 DMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYG 633

Query: 378 ---ALW-SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
              A W   GD   A  +  EM+ KG+ P+    +SL+SC  R G  DEA  +L ++  T
Sbjct: 634 ALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGT 693

Query: 434 RFRPTV--------------------------ISYNIIILGFCKTRRINESIEVLAAMFE 467
              P +                          I +NI+I G CK  RI ++  +LA + +
Sbjct: 694 DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD 753

Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
           KG   +  TY  LI G    G+   A +L + ++S+
Sbjct: 754 KGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 242/558 (43%), Gaps = 82/558 (14%)

Query: 23  ETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF 82
           E R N  L+   V E  F  +I    + G+ +++   +  MV +  + ++ +   +I  +
Sbjct: 338 EIRKNKQLV---VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGY 394

Query: 83  FQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDV 141
            +  +  +A  ++  +   G  PD ++YN+L+ G+CK   +  A +  + +   GF+   
Sbjct: 395 CKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATT 454

Query: 142 VTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
           +TYN ++   CS G I+ A +++  +L+    P  I+ + L+      G+T+KA+ L  E
Sbjct: 455 LTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKE 514

Query: 202 M-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGK 244
                             G+CK   + +A + V  ++   C PD+I+Y  L      +G 
Sbjct: 515 TLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGD 574

Query: 245 WEEGEKLMTE-----------------------------------MISRGLEPNVVTYSI 269
            +   +++ E                                   M +RGL PN V Y  
Sbjct: 575 MDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGA 634

Query: 270 LISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDG 329
           LI+  C++G    A ++     EKGL P+ +    L+S + + G+ D A   L  ++   
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTD 694

Query: 330 CLPDI--------------------------VNYNTILAAFCKNGNADQALEIFEKLSDV 363
            +PDI                          + +N ++   CK G  + A  +   L D 
Sbjct: 695 MIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK 754

Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
           G   +  +Y+++     +SG    A  +   MLS G+ P+ +TYNSLI  LC+ G +  A
Sbjct: 755 GFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814

Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           V L   + +    P  I+YN +I   CK   I E+ ++   M E+G  P   TY +LI G
Sbjct: 815 VSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILING 874

Query: 484 IGYGGWRAEAMELANALV 501
           +   G+  EA++L + ++
Sbjct: 875 LCTQGYMEEAIKLLDQMI 892



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 216/471 (45%), Gaps = 44/471 (9%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      +  L+K     G  D++L     M+  G  P+ + C+ L+  FF+  K+ KA+
Sbjct: 450 FAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509

Query: 93  RVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            +  E L +    +   +N +I+G CK  ++  A +++D+++     PD++TY  +    
Sbjct: 510 NLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGY 569

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
           C  G ++ A ++ ++L      PT+  +  LI    +  Q  K   +L EM         
Sbjct: 570 CKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNT 629

Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
                   G CK+G +  A+     +  +G  P++   + L+      GK++E   ++  
Sbjct: 630 VAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQN 689

Query: 255 MISRGLEPNV--------------------------VTYSILISSLCRDGKTEDAVDVLR 288
           ++   + P++                          + ++I+I  LC+ G+ EDA ++L 
Sbjct: 690 LVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLA 749

Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
             K+KG   D ++Y  LI      G +D+A +  D M+S G  P+IV YN+++   CK+G
Sbjct: 750 DLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809

Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
              +A+ +F+KL   G  PN  +YNT+       G    A  +   M+ +GI P   TY+
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYS 869

Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
            LI+ LC  G ++EA+ LL  M      P  ++Y  +I G+ +   ++  I
Sbjct: 870 ILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPI 920



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 226/481 (46%), Gaps = 38/481 (7%)

Query: 33  FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
           F      F  L++    AG+ D +L   + M   GC+  +  C  ++ +  Q       V
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 93  RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
            V E +++ G  PD F    +   +CK   +  A + ++ +   G   ++V Y+ ++   
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288

Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
           C  G    A ++ D L      P ++TYT+L++    E   ++A  ++ E+   K+ +V 
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVD 348

Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
           +A                  +  ++     MG+ E+  +L+ EM+   L+ N+  Y+I+I
Sbjct: 349 EAV-----------------FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMI 391

Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
           +  C+ G+  +A ++L      G+ PD YSY+ L+  YCK G ++ A E  + M+ +G  
Sbjct: 392 NGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451

Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
              + YN +L  FC  G+ D AL ++  +   G  PN  S +T+    + SG   +AL +
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511

Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
             E L++G+  +  T+N++I+ LC+   + EA  L+  M+  R  P +I+Y  +  G+CK
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571

Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
              ++ +  +L          NE      +E +G+    A  +E  N+L++ H I++   
Sbjct: 572 IGDMDRASRIL----------NE------LENLGF----APTIEFFNSLITGHFIAKQHG 611

Query: 512 K 512
           K
Sbjct: 612 K 612



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 30/283 (10%)

Query: 43  LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKF--FQERKSNKAVRVMEILEK 100
           L+   +R GKFDE+   ++++V     PD+      I K   F +  +       +I+  
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIM-- 727

Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
                   +N +I G CK  +IE A  +L  L+ +GF  D  TY+ +I    + G ++ A
Sbjct: 728 --------WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVA 779

Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
           F + D +L     P ++TY  LI                   G+CK G + +A    + L
Sbjct: 780 FDLRDTMLSVGLTPNIVTYNSLI------------------YGLCKSGELSRAVSLFKKL 821

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
            ++G  P+ I+YN L+      G   E  KL   MI  G+ P V TYSILI+ LC  G  
Sbjct: 822 WTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYM 881

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
           E+A+ +L    E  + P+  +Y  LI  Y +   +D+ I  LD
Sbjct: 882 EEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLD 924



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 1/163 (0%)

Query: 40  FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
           +  LI     +G  D +    ++M++ G  P++V    LI    +  + ++AV + + L 
Sbjct: 763 YSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLW 822

Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
             G  P+   YN LI   CK   I  A K+  R+   G  P V TY+I+I  LC++G +E
Sbjct: 823 TKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYME 882

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE 201
            A K+ DQ++ +N  P  +TY  LIQ  +     D  +  LD+
Sbjct: 883 EAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 183/374 (48%), Gaps = 18/374 (4%)

Query: 59  FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP-DVFAYNALISGFC 117
            ++ + A G K +VV     I+ +F+         ++ ++EK G   +V  Y  LI GF 
Sbjct: 247 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFS 306

Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
              +IE A ++ + +R +G   DV  Y  +I   C  G ++ A  +FD++      P+  
Sbjct: 307 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366

Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
           TY  LI      GQ + A  L++EM                 G C+ GMV +A +    +
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426

Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
           E +G + DV +YN +   L  + + +E + L+  M+ RG+ PN ++++ LI   C++G  
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486

Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
            +A  V R  +EKG  P+  +Y+ LI  Y K G +  A +  D + + G +PD+    ++
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 546

Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
           +   C +G  D AL++F+++   G  PNV +Y  M S L   G    A  +  EM   G+
Sbjct: 547 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606

Query: 401 EPDEITYNSLISCL 414
            PD+  Y+SL+  L
Sbjct: 607 TPDDTVYSSLVGSL 620



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 216/462 (46%), Gaps = 19/462 (4%)

Query: 39  QFMKLIKRSFRAGK-FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
           +F  L+ R +   K F E+L   E M   G   D   C   +    +  + +  +R    
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 215

Query: 98  LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
           +     E  V++   ++ G CK   +E+  K++D + ++G   +VVTYN  I     R  
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GM--------- 204
           +    ++   + ++     V+TYT+LI      G+ ++A +L +EM   G+         
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 335

Query: 205 -----CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
                C+ G V +A      +  +G  P   +Y  L+  +   G+ E  + L+ EM  +G
Sbjct: 336 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395

Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
           ++ N V ++ LI   C  G  ++A+ +    ++KGL  D ++Y+ + S  CK  R D A 
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455

Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
             L  M+  G  P+ +++ T++  +CK GN  +A  +F ++ + G  PN+ +YN +    
Sbjct: 456 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515

Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
              G+   A  +  E+ ++G+ PD  T  SLI   C DG VD A+ L  +M      P V
Sbjct: 516 SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNV 575

Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
           ++Y  +I G  K  R  E+ ++   M E G  P++T Y  L+
Sbjct: 576 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 215/465 (46%), Gaps = 37/465 (7%)

Query: 35  VKETQFMKLIKRSFRAGKFDESL----YFIESMVANGCKPDVVMCTKLIKKFFQ------ 84
           + ++Q    I+  F     D+ L      I S+V + C        K  +KFF       
Sbjct: 106 LHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVY 165

Query: 85  --ERKSNKAVRVMEILEKYG----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
              +   +A+   E +EK G    E     Y   +    +  Q++   +   R+ +    
Sbjct: 166 ADNKMFGEALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRRMVNLDVE 222

Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
             V +  I++  LC RG +E   K+ D++     K  V+TY   I+              
Sbjct: 223 VTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIE-------------- 268

Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
               G  K+  +G   + +  +E  G   +V++Y +L+    N+GK EE ++L  EM  +
Sbjct: 269 ----GYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324

Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
           G+E +V  Y+ +IS  CR G  + A+ +     +KGL P A++Y  LI   CK G+++ A
Sbjct: 325 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
              ++ M   G   + V +NT++  +C++G  D+AL +   +   G   +V +YN++ S 
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444

Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
           L     K  A G++  M+ +G+ P+ +++ +LI   C++G   EA  +  +ME     P 
Sbjct: 445 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504

Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
           +I+YN++I G+ K   + E+ ++   +  +G  P+  T   LI G
Sbjct: 505 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 549



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 206/465 (44%), Gaps = 42/465 (9%)

Query: 46  RSFRAGKFDESLYFIE-------SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
           RS ++ K  +S  F E       + V +G +  V +   L+     E K N+A    +  
Sbjct: 99  RSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRA----KFK 154

Query: 99  EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
           EK+       ++ L   +        A +  + +  +GF  D  +  + + +L   G ++
Sbjct: 155 EKF-------FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVD 207

Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
           S  + F +++  + + TV + TI++                   G+CK+G V    + + 
Sbjct: 208 SCLRFFRRMVNLDVEVTVYSLTIVLD------------------GLCKRGDVEMGRKLMD 249

Query: 219 SLESRGCQPDVISYNMLLRTL---LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
            + ++G + +V++YN  +      L++G   E   ++T M   G+  NVVTY++LI    
Sbjct: 250 EVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE---ILTLMEKEGVACNVVTYTLLIHGFS 306

Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
             GK E+A  +    +EKG+  D Y Y  +IS  C+ G +  A+   D M   G +P   
Sbjct: 307 NIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366

Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
            Y  ++   CK G  + A  +  ++   G   N   +NT+      SG    AL +   M
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426

Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
             KG+E D   YNS+ S LC+    DEA GLL  M      P  +S+  +I  +CK    
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486

Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
            E+  V   M EKG  PN  TY +LI+G    G   EA +L + L
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,680,466,468
Number of Sequences: 23463169
Number of extensions: 300064430
Number of successful extensions: 1049608
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8474
Number of HSP's successfully gapped in prelim test: 4693
Number of HSP's that attempted gapping in prelim test: 745922
Number of HSP's gapped (non-prelim): 85325
length of query: 534
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 387
effective length of database: 8,910,109,524
effective search space: 3448212385788
effective search space used: 3448212385788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)