BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047017
(534 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/522 (66%), Positives = 420/522 (80%), Gaps = 17/522 (3%)
Query: 25 RPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ 84
R H S ++TQ +K+ RS R+G + ESL+ +E+MV G PDV++CTKLIK FF
Sbjct: 77 RRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136
Query: 85 ERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
R KAVRVMEILEK+G+PDVFAYNALI+GFCK N+I+ A +VLDR+RS+ FSPD VTY
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-- 202
NIMIGSLCSRG ++ A KV +QLL DNC+PTVITYTILI+ATMLEG D+A+KL+DEM
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 203 ---------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEE 247
GMCK+GMV +AF+ VR+LE +GC+PDVISYN+LLR LLN GKWEE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 248 GEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLIS 307
GEKLMT+M S +PNVVTYSILI++LCRDGK E+A+++L+ KEKGLTPDAYSYDPLI+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 308 AYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPP 367
A+C++GRLD+AIEFL+ MISDGCLPDIVNYNT+LA CKNG ADQALEIF KL +VGC P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
N SSYNTMFSALWSSGDKIRAL MI EM+S GI+PDEITYNS+ISCLCR+GMVDEA LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
VDM S F P+V++YNI++LGFCK RI ++I VL +M GC+PNETTY +LIEGIG+
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Query: 488 GWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISH 529
G+RAEAMELAN LV + AIS +FKRL+RTFPLL+V + S
Sbjct: 557 GYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQRSSQ 598
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 317/487 (65%), Gaps = 21/487 (4%)
Query: 32 SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
SF +++ + +++ R G+ +E F+E+MV +G PD++ CT LI+ F + K+ KA
Sbjct: 97 SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 156
Query: 92 VRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
+++EILE G PDV YN +ISG+CKA +I A VLDR+ SPDVVTYN ++ S
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRS 213
Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
LC G ++ A +V D++L+ +C P VITYTILI+AT + AMKLLDEM
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
G+CK+G + +A +F+ + S GCQP+VI++N++LR++ + G+W + EKL+
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
+M+ +G P+VVT++ILI+ LCR G A+D+L + G P++ SY+PL+ +CK+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
++D AIE+L+ M+S GC PDIV YNT+L A CK+G + A+EI +LS GC P + +YN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
T+ L +G +A+ ++ EM +K ++PD ITY+SL+ L R+G VDEA+ + E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
RP +++N I+LG CK+R+ + +I+ L M +GCKPNET+Y +LIEG+ Y G EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 494 MELANAL 500
+EL N L
Sbjct: 574 LELLNEL 580
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 260/489 (53%), Gaps = 21/489 (4%)
Query: 53 FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNA 111
+S +ES+V G KP+V T+L+ + + KA+RV+E++ G PD AY
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
L++ CK + A ++++++ G+ + VTYN ++ LC G + + + ++L++
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAF 214
P TY+ L++A E TD+A+KLLDE+ G CK+G A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
R L ++G + +V+SYN+LLR L G+WEE L+ EM P+VVTY+ILI+SL
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 275 CRDGKTEDAVDVLR--AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
G+TE A+ VL+ + A SY+P+I+ CK+G++DL ++ LD MI C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
+ YN I + N +A I + LS+ Y ++ ++L G+ A ++
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME-STRFRPTVISYNIIILGFCK 451
EM G +PD TY++LI LC +GM A+ +L ME S +PTV ++N +ILG CK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 452 TRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
RR + ++EV M EK PNETTY +L+EGI + A E+ + L I ++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
Query: 512 KRLNRTFPL 520
R+ F L
Sbjct: 567 DRIVMQFNL 575
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 21/350 (6%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
G ++SL F+E ++ G P+ + L++ ++ER +++AV+++ EI+ K GEP++ +Y
Sbjct: 190 GSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 249
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N L++GFCK + + A + L ++GF +VV+YNI++ LC G E A + ++
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-------------------MCKKGMV 210
+ P+V+TY ILI + G+T++A+++L EM +CK+G V
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+ + + R C+P+ +YN + + K +E ++ + ++ Y +
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 429
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM-ISDG 329
I+SLCR G T A +L G PDA++Y LI C +G A+E L M S+
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 489
Query: 330 CLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
C P + N+N ++ CK D A+E+FE + + PN ++Y + +
Sbjct: 490 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 8/255 (3%)
Query: 282 DAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTIL 341
D+ L + G P+ L+ CK RL AI ++ M+S G +PD Y ++
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 342 AAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIE 401
CK GN A+++ EK+ D G P N +YN + L G ++L + ++ KG+
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
P+ TY+ L+ ++ DEAV LL ++ P ++SYN+++ GFCK R ++++ +
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL--------VSMHAISRDTFKR 513
+ KG K N +Y +L+ + G EA L + V + I ++
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 514 LNRTFPLLDVYKEIS 528
RT L V KE+S
Sbjct: 329 HGRTEQALQVLKEMS 343
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
N + E L G PNV+ + L + +A+ +I M+S GI PD Y
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
L++ LC+ G V A+ L+ ME + ++YN ++ G C +N+S++ + + +K
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
G PN TY L+E EA++L + ++
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG--EPDV 106
R G + + M G PD + LI+ E A+ V+ I+E+ +P V
Sbjct: 435 RKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTV 494
Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
+NA+I G CK + +LA +V + + + P+ TY I++ + +E A +V D+
Sbjct: 495 DNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDE 554
Query: 167 L 167
L
Sbjct: 555 L 555
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 268 bits (685), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 248/474 (52%), Gaps = 18/474 (3%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+F KL+ + KFD + E M G ++ + LI F + + + A+ V+
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+ K G EPD+ N+L++GFC N+I A ++ ++ G+ PD T+N +I L
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
A + D+++ C+P ++TY I++ G D A+ LL +M
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
+C V A ++++G +P+V++YN L+R L N G+W + +L+++MI R
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
+ PNVVT+S LI + ++GK +A + ++ + PD ++Y LI+ +C RLD A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
+ MIS C P++V YNT++ FCK D+ +E+F ++S G N +Y T+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
+ + + A + +M+S G+ PD +TY+ L+ LC +G V+ A+ + ++ ++ P +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
+YNI+I G CK ++ + ++ ++ KG KPN TY ++ G G + EA
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 200/414 (48%), Gaps = 18/414 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI FR + E++ ++ MV GC+PD+V ++ + + A+ +++ +E
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
+ EP V YN +I C + A + + ++G P+VVTYN +I LC+ G
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ ++ P V+T++ LI A + EG+ +A KL DEM
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G C + +A + S+ C P+V++YN L++ + +EG +L EM RGL
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
N VTY+ LI + + ++A V + G+ PD +Y L+ C +G+++ A+
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
+Y+ PDI YN ++ CK G + ++F LS G PNV +Y TM S
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
G K A + EM +G PD TYN+LI RDG + L+ +M S RF
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 177/367 (48%), Gaps = 19/367 (5%)
Query: 130 DRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLE 189
D ++SR F P +V ++ ++ ++ + + +Q+ + TY+ILI
Sbjct: 71 DMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC---- 125
Query: 190 GQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGE 249
C++ + A + + G +PD+++ N LL + + +
Sbjct: 126 --------------FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
L+ +M+ G +P+ T++ LI L R + +AV ++ KG PD +Y +++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
CK G +DLA+ L M P +V YNTI+ A C N + AL +F ++ + G PNV
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD 429
+YN++ L + G A ++S+M+ + I P+ +T+++LI ++G + EA L +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 430 MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGW 489
M P + +Y+ +I GFC R++E+ + M K C PN TY LI+G
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 490 RAEAMEL 496
E MEL
Sbjct: 412 VDEGMEL 418
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 134/251 (53%), Gaps = 1/251 (0%)
Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
LN K ++ L +M+ P++V +S L+S++ + K + + + + G++ +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
Y+Y LI+ +C+ +L LA+ L M+ G PDIV N++L FC A+ + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
+ ++G P+ ++NT+ L+ A+ ++ M+ KG +PD +TY +++ LC+ G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
+D A+ LL ME + P V+ YN II C + +N+++ + M KG +PN TY
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 480 LIEGI-GYGGW 489
LI + YG W
Sbjct: 297 LIRCLCNYGRW 307
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 20/266 (7%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
+ DE+ + E M++ C P+VV LIK F + ++ ++ + + + + G + Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
LI GF +A + + A V ++ S G PD++TY+I++ LC+ G +E+A VF+ L R
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
+P + TY I+I+ GMCK G V + SL +G +P+V+
Sbjct: 496 KMEPDIYTYNIMIE------------------GMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
+Y ++ G EE + L EM G P+ TY+ LI + RDG + +++R
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLD 316
+ DA S L++ DGRLD
Sbjct: 598 RSCRFVGDA-STIGLVTNMLHDGRLD 622
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%)
Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
Y Y + D +LD A+ M+ P IV ++ +L+A K D + + E+
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
+ ++G N+ +Y+ + + AL ++++M+ G EPD +T NSL++ C
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
+ +AV L+ M ++P ++N +I G + R +E++ ++ M KGC+P+ TY +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 480 LIEGI 484
++ G+
Sbjct: 227 VVNGL 231
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+ + +M+ P + ++ L+S + + D + L M++ + +Y+I+I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
FC+ +++ ++ VLA M + G +P+ T L+ G +G ++A+ L +V M
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
+AGK ++ S+ G KP+VV T ++ F ++ +A + +++ G PD
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
YN LI + + +++ +RS F D T ++ ++ G ++ +F
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 254/473 (53%), Gaps = 18/473 (3%)
Query: 39 QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
+F KL+ + KFD + E M G + + LI F + + A+ V+ +
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 99 EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
K G EP++ ++L++G+C + +I A ++D++ G+ P+ VT+N +I L
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
A + D+++ C+P ++TY +++ G TD A LL++M
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
G+CK + A + +E++G +P+V++Y+ L+ L N G+W + +L+++MI R +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
P+V T+S LI + ++GK +A + ++ + P +Y LI+ +C RLD A +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
++M+S C PD+V YNT++ FCK ++ +E+F ++S G N +YN + L+
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
+GD A + EM+S G+ P+ +TYN+L+ LC++G +++A+ + ++ ++ PT+
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
+YNI+I G CK ++ + ++ + KG KP+ Y +I G G + EA
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 217/451 (48%), Gaps = 19/451 (4%)
Query: 3 TVVSCINPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIES 62
T+ S +N + + R+S + + + F LI F K E++ I+
Sbjct: 153 TLSSLLNGYCHSK-RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 63 MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
MVA GC+PD+V ++ + ++ A ++ +E+ EP V YN +I G CK
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
++ A + + ++G P+VVTY+ +I LC+ G A ++ ++ P V T++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
LI A + EG+ +A KL DEM G C + +A Q + S+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
C PDV++YN L++ + EEG ++ EM RGL N VTY+ILI L + G + A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
++ + G+ P+ +Y+ L+ CK+G+L+ A+ +Y+ P I YN ++
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
CK G + ++F LS G P+V +YNTM S G K A + EM G P+
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
YN+LI RDG + + L+ +M S F
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 211/427 (49%), Gaps = 19/427 (4%)
Query: 77 KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
KL + E K + AV + E+++ P + ++ L+S K N+ ++ + +++++
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G + TY+I+I C R + A V ++++ +P ++T + L+
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN----------- 159
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
G C + +A V + G QP+ +++N L+ L K E L+ M
Sbjct: 160 -------GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
+++G +P++VTY ++++ LC+ G T+ A ++L ++ L P Y+ +I CK +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
D A+ M + G P++V Y+++++ C G A + + + P+V +++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
A G + A + EM+ + I+P +TY+SLI+ C +DEA + M S
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
P V++YN +I GFCK +R+ E +EV M ++G N TY +LI+G+ G A E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 496 LANALVS 502
+ +VS
Sbjct: 453 IFKEMVS 459
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 178/381 (46%), Gaps = 26/381 (6%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
++ A +F ++++ P++I ++ L+ A + D + L ++M
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-------------- 107
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
++ G + +Y++L+ + ++ +M+ G EPN+VT S L++ C
Sbjct: 108 ----QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ +AV ++ G P+ +++ LI + A+ +D M++ GC PD+V
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
Y ++ CK G+ D A + K+ P V YNT+ L AL + EM
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
+KGI P+ +TY+SLISCLC G +A LL DM + P V +++ +I F K ++
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH----AISRDT-- 510
E+ ++ M ++ P+ TY LI G EA ++ +VS H ++ +T
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 511 --FKRLNRTFPLLDVYKEISH 529
F + R ++V++E+S
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQ 424
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 261 bits (667), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 242/447 (54%), Gaps = 21/447 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDV 106
R + +L + M+ G +PD+V + L+ + ++ ++AV +++ + +Y +P+
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY-QPNT 185
Query: 107 FAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQ 166
+N LI G N+ A ++DR+ +RG PD+ TY ++ LC RG I+ A + +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 167 LLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQ 226
+ + + V+ YT +I A +C V A ++++G +
Sbjct: 246 MEKGKIEADVVIYTTIIDA------------------LCNYKNVNDALNLFTEMDNKGIR 287
Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
P+V++YN L+R L N G+W + +L+++MI R + PNVVT+S LI + ++GK +A +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
++ + PD ++Y LI+ +C RLD A + MIS C P++V YNT++ FCK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
++ +E+F ++S G N +YNT+ L+ +GD A + +M+S G+ PD IT
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
Y+ L+ LC+ G +++A+ + ++ ++ P + +YNI+I G CK ++ + ++ ++
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEA 493
KG KPN Y +I G G + EA
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 225/481 (46%), Gaps = 19/481 (3%)
Query: 17 RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
R+S + ++ + F LI F K E++ I+ MVA GC+PD+
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 77 KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
++ + + A+ +++ +EK E DV Y +I C + A + + ++
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G P+VVTYN +I LC+ G A ++ ++ P V+T++ LI A + EG+ +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
KL DEM R PD+ +Y+ L+ + +E + + M
Sbjct: 345 EKLYDEM------------------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
IS+ PNVVTY+ LI C+ + E+ +++ R ++GL + +Y+ LI + G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
D+A + M+SDG PDI+ Y+ +L CK G ++AL +FE L P++ +YN M
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
+ +G + + KG++P+ I Y ++IS CR G+ +EA L +M+
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
P +YN +I + S E++ M G + +T ++I + G +E
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
Query: 496 L 496
+
Sbjct: 627 M 627
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 210/427 (49%), Gaps = 19/427 (4%)
Query: 77 KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
KL + + K + AV + E+++ P + +N L+S K N+ +L + +R+++
Sbjct: 50 KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
S D+ +YNI+I C R + A V ++++ +P ++T + L+ + +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
+ L+D+M FV QP+ +++N L+ L K E L+ M
Sbjct: 170 VALVDQM-------------FVMEY-----QPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
++RG +P++ TY +++ LC+ G + A+ +L+ ++ + D Y +I A C +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
+ A+ M + G P++V YN+++ C G A + + + PNV +++ +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
A G + A + EM+ + I+PD TY+SLI+ C +DEA + M S
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 436 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
P V++YN +I GFCK +R+ E +E+ M ++G N TY LI+G+ G A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 496 LANALVS 502
+ +VS
Sbjct: 452 IFKKMVS 458
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+ + EM+ P + +N L+S + + D + L M++ R + SYNI+I
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
FC+ ++ ++ VL M + G +P+ T L+ G +G +EA+ L + + M
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +L + ++D L + M G ++ + +I F + RK A M +
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G EP+ ++ LI+G C ++ A +++DR+ G PD++T N ++ LC G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A + D+++ C+P +TY ++ GQT AM+LL +M
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G+CK G + AF +E +G ++I+YN+L+ N G+W++G KL+ +MI R +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
PNVVT+S+LI S ++GK +A ++ + +G+ PD +Y LI +CK+ LD A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
+D M+S GC P+I +N ++ +CK D LE+F K+S G + +YNT+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
G A + EM+S+ + P+ +TY L+ LC +G ++A+ + +E ++ +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
YNIII G C +++++ ++ ++ KG KP TY ++I G+ G +EA
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 18/399 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P V ++ L S K Q +L + ++ +G + ++ T +IMI C + AF
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P IT++ LI LEG+ +A++L+D M
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM------------------VEM 187
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD+I+ N L+ L GK E L+ +M+ G +PN VTY +++ +C+ G+T A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
+++LR +E+ + DA Y +I CK G LD A + M G +I+ YN ++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
FC G D ++ + PNV +++ + + G A + EM+ +GI PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
ITY SLI C++ +D+A ++ M S P + ++NI+I G+CK RI++ +E+
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
M +G + TY LI+G G A EL +VS
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 19/345 (5%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFA 108
AG++D+ + M+ P+VV + LI F +E K +A + E++ + PD
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
Y +LI GFCK N ++ AN+++D + S+G P++ T+NI+I C I+ ++F ++
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+TY LIQ G C+ G + A + + + SR P+
Sbjct: 431 LRGVVADTVTYNTLIQ------------------GFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
+++Y +LL L + G+ E+ ++ ++ +E ++ Y+I+I +C K +DA D+
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
+ KG+ P +Y+ +I CK G L A M DG PD YN ++ A +G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
+A +++++ E+L G + S+ + L K L M+S
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 155/308 (50%), Gaps = 8/308 (2%)
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
+SY LR+ L K ++ L +MI P V+ +S L S++ + + + + + +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
+ KG+ + Y+ +I+ +C+ +L LA + +I G P+ + ++T++ C G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
+ALE+ +++ ++G P++ + NT+ + L SG + A+ +I +M+ G +P+ +TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
+++ +C+ G A+ LL ME + + Y+III G CK ++ + + M KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 470 CKPNETTYVLLIEGIGYGG-WRAEAMELANAL-------VSMHAISRDTFKRLNRTFPLL 521
N TY +LI G G W A L + + V ++ D+F + +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 522 DVYKEISH 529
+++KE+ H
Sbjct: 354 ELHKEMIH 361
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 245/460 (53%), Gaps = 18/460 (3%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +L + +++ L + M + G + + +I F + RK + A M +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G EPD +N L++G C ++ A +++DR+ G P ++T N ++ LC G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A + D+++ +P +TY ++ GQT AM+LL +M
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G+CK G + AF +E +G + D+I+YN L+ N G+W++G KL+ +MI R +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
PNVVT+S+LI S ++GK +A +L+ ++G+ P+ +Y+ LI +CK+ RL+ AI+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
+D MIS GC PDI+ +N ++ +CK D LE+F ++S G N +YNT+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
SG A + EM+S+ + PD ++Y L+ LC +G +++A+ + +E ++ +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
Y III G C +++++ ++ ++ KG K + Y ++I
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 206/417 (49%), Gaps = 19/417 (4%)
Query: 87 KSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
K++ AV + ++++ P V +N L S K Q EL + ++ S+G + + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
IMI C + AF ++++ +P + + L+ G+C
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN------------------GLC 169
Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
+ V +A + V + G +P +I+ N L+ L GK + L+ M+ G +PN V
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
TY +++ +C+ G+T A+++LR +E+ + DA Y +I CKDG LD A + M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
G DI+ YNT++ FC G D ++ + PNV +++ + + G
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
A ++ EM+ +GI P+ ITYNSLI C++ ++EA+ ++ M S P ++++NI+
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
I G+CK RI++ +E+ M +G N TY L++G G A +L +VS
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 224/451 (49%), Gaps = 18/451 (3%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
K D+++ M+ + P V+ +L + ++ + + + +E G ++ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
+I+ FC+ ++ A + ++ G+ PD V +N ++ LC + A ++ D+++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQA 213
KPT+IT L+ L G+ A+ L+D M MCK G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
+ +R +E R + D + Y++++ L G + L EM +G + +++TY+ LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
C G+ +D +LR ++ ++P+ ++ LI ++ K+G+L A + L M+ G P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
+ YN+++ FCK ++A+++ + + GC P++ ++N + + + L +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
EM +G+ + +TYN+L+ C+ G ++ A L +M S R RP ++SY I++ G C
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
+ +++E+ + + + + Y+++I G+
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%)
Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
SY +S+ + D A++ MI LP ++++N + +A K + L + +++
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
G ++ + + M + A + +++ G EPD + +N+L++ LC + V
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
EA+ L+ M +PT+I+ N ++ G C ++++++ ++ M E G +PNE TY +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 481 IEGIGYGGWRAEAMEL 496
+ + G A AMEL
Sbjct: 235 LNVMCKSGQTALAMEL 250
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+ + +M+ P I +N L S + + + + L MES ++ + +I+I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
FC+ R+++ + + + + G +P+ + L+ G+ +EA+EL + +V M
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 245/477 (51%), Gaps = 18/477 (3%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+F KL+ + KF+ + E M G D+ + I F + + + A+ V+
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+ K G EPD+ ++L++G+C + +I A ++D++ G+ PD T+ +I L
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
A + DQ+++ C+P ++TY ++ G D A+ LL +M
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
G+CK + A ++++G +PDV +Y+ L+ L N G+W + +L+++MI R
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
+ PNVVT+S LI + ++GK +A + ++ + PD ++Y LI+ +C RLD A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
+ MIS C P++V Y+T++ FCK ++ +E+F ++S G N +Y T+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
+ + D A + +M+S G+ P+ +TYN L+ LC++G + +A+ + ++ + P +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+YNI+I G CK ++ + E+ + KG PN Y +I G G + EA L
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 202/414 (48%), Gaps = 18/414 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI F K E++ ++ MV GC+PD+V ++ + + A+ +++ +E
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K E DV YN +I G CK ++ A + + ++G PDV TY+ +I LC+ G
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ ++ P V+T++ LI A + EG+ +A KL DEM
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G C + +A + S+ C P+V++Y+ L++ + EEG +L EM RGL
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
N VTY+ LI + ++A V + G+ P+ +Y+ L+ CK+G+L A+
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
+Y+ PDI YN ++ CK G + E+F LS G PNV +YNTM S
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
G K A ++ +M G P+ TYN+LI RDG + + L+ +M S F
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 53/375 (14%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
++ A +F +++ P+++ + L+ A + + + L ++M
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-------------- 109
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
++ G D+ +Y++ + + ++ +M+ G EP++VT S L++ C
Sbjct: 110 ----QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ DAV ++ E G PD +++ LI + A+ +D M+ GC PD+V
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
Y T++ CK G+ D AL + +K+ +V YNT+ L AL + +EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI---------------- 440
+KGI PD TY+SLISCLC G +A LL DM + P V+
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 441 -------------------SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLI 481
+Y+ +I GFC R++E+ + M K C PN TY LI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 482 EGIGYGGWRAEAMEL 496
+G E MEL
Sbjct: 406 KGFCKAKRVEEGMEL 420
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 142/260 (54%), Gaps = 2/260 (0%)
Query: 232 YNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
Y +LR L ++ K ++ L +M+ P++V ++ L+S++ + K E + +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ G++ D Y+Y I+ +C+ +L LA+ L M+ G PDIV +++L +C +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
A+ + +++ ++G P+ ++ T+ L+ A+ ++ +M+ +G +PD +TY ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
++ LC+ G +D A+ LL ME + V+ YN II G CK + +++++ + M KG
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 471 KPNETTYVLLIEGI-GYGGW 489
+P+ TY LI + YG W
Sbjct: 290 RPDVFTYSSLISCLCNYGRW 309
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 22/275 (8%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
+ DE+ + E M++ C P+VV + LIK F + ++ + + + + + G + Y
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
LI GF +A + A V ++ S G P+++TYNI++ LC G + A VF+ L R
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
+P + TY I+I+ GMCK G V ++ +L +G P+VI
Sbjct: 498 TMEPDIYTYNIMIE------------------GMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
+YN ++ G EE + L+ +M G PN TY+ LI + RDG E + ++++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
+ G DA S L++ DGRLD + FLD +
Sbjct: 600 RSCGFAGDA-STIGLVTNMLHDGRLDKS--FLDML 631
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 18/472 (3%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +L R ++D L F + M NG + D+ T +I + +++K A V+
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G EPD ++ L++GFC ++ A ++DR+ PD+VT + +I LC +G +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A + D+++ +P +TY ++ G + A+ L +M
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
+CK G A +E +G + DV++Y+ L+ L N GKW++G K++ EMI R +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
P+VVT+S LI ++GK +A ++ +G+ PD +Y+ LI +CK+ L A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
D M+S GC PDIV Y+ ++ ++CK D + +F ++S G PN +YNT+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVIS 441
SG A + EM+S+G+ P +TY L+ LC +G +++A+ + M+ +R +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 442 YNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
YNIII G C +++++ + ++ +KG KP+ TY ++I G+ G +EA
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 231/470 (49%), Gaps = 18/470 (3%)
Query: 31 LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
L ++ F L+ G+ E++ ++ MV +PD+V + LI + + ++
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 91 AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
A+ +++ + +YG +PD Y +++ CK+ LA + ++ R VV Y+I+I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
SLC G + A +F+++ K V+TY+ LI +G+ D K+L EM
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
K+G + +A + + +RG PD I+YN L+ E ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKD 312
M+S+G EP++VTYSILI+S C+ + +D + + R KGL P+ +Y+ L+ +C+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 313 GRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSY 372
G+L+ A E M+S G P +V Y +L C NG ++ALEIFEK+ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 373 NTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
N + + ++ A + + KG++PD +TYN +I LC+ G + EA L M+
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
P +YNI+I + S+E++ M G + +T ++I+
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 222/446 (49%), Gaps = 19/446 (4%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
K ++++ ESM+ + P + +L + ++ + + + +E G E D++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
+I+ +C+ ++ A VL R G+ PD +T++ ++ C G + A + D+++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
+P ++T + LI G+C KG V +A + + G QPD +
Sbjct: 170 KQRPDLVTVSTLIN------------------GLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
+Y +L L G L +M R ++ +VV YSI+I SLC+DG +DA+ +
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ KG+ D +Y LI C DG+ D + L MI +PD+V ++ ++ F K G
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
+A E++ ++ G P+ +YN++ A M M+SKG EPD +TY+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
I+ C+ VD+ + L ++ S P I+YN ++LGFC++ ++N + E+ M +G
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
P+ TY +L++G+ G +A+E+
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEI 477
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 19/378 (5%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-E 96
Q+ +I + G FD++L M G K DVV + LI + K + +++ E
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 97 ILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
++ + PDV ++ALI F K ++ A ++ + + +RG +PD +TYN +I C
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
+ A ++FD ++ C+P ++TY+ILI + CK V +
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINS------------------YCKAKRVDDGMRL 407
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
R + S+G P+ I+YN L+ GK ++L EM+SRG+ P+VVTY IL+ LC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+G+ A+++ ++ +T Y+ +I C ++D A + G PD+V
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
YN ++ CK G+ +A +F K+ + GC P+ +YN + A I ++ +I EM
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 397 SKGIEPDEITYNSLISCL 414
G D T +I L
Sbjct: 588 VCGFSADSSTIKMVIDML 605
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
+SY LR + K + L MI P + ++ L S++ R + + + +
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
+ G+ D Y+ +I+ YC+ +L A L G PD + ++T++ FC G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
+A+ + +++ ++ P++ + +T+ + L G AL +I M+ G +PDE+TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
+++ LC+ G A+ L ME + +V+ Y+I+I CK ++++ + M KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 470 CKPNETTYVLLIEGI-GYGGW 489
K + TY LI G+ G W
Sbjct: 276 IKADVVTYSSLIGGLCNDGKW 296
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%)
Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
+T SY + D +++ AI+ + MI LP +++N + +A + D L
Sbjct: 31 ITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 90
Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
+ + G ++ + M + + A ++ G EPD IT+++L++
Sbjct: 91 GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
C +G V EAV L+ M + RP +++ + +I G C R++E++ ++ M E G +P+E
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 475 TTYVLLIEGIGYGGWRAEAMEL 496
TY ++ + G A A++L
Sbjct: 211 VTYGPVLNRLCKSGNSALALDL 232
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 258/515 (50%), Gaps = 53/515 (10%)
Query: 32 SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
+F + ++++ + K D+++ MV + P + KL+ + +K +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 92 VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
+ + E +++ G +++ YN LI+ FC+ +QI LA +L ++ G+ P +VT + ++
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
C I A + DQ++ +P IT+T LI L + +A+ L+D M
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 203 ---------GMCKKGMVGQAFQFVRSLES------------------------------- 222
G+CK+G + AF + +E+
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 223 ----RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+G +P+VI+Y+ L+ L N +W + +L+++MI R + PNVVT++ LI + ++G
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
K +A + ++ + PD ++Y LI+ +C RLD A + MIS C P++V YN
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
T++ FCK D+ +E+F ++S G N +Y T+ + + D A + +M+S
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
G+ P+ +TYN+L+ LC++G +++A+ + ++ ++ PT+ +YNI+I G CK ++ +
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
++ ++ KG KP+ Y +I G G + EA
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 18/369 (4%)
Query: 134 SRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTD 193
R FS Y ++ + ++ A +F +++ P++ + L+ A + D
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 194 KAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
+ L ++M + G ++ +YN+L+ + L+
Sbjct: 103 LVISLGEKM------------------QRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
+M+ G EP++VT S L++ C + DAV ++ E G PD ++ LI
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
+ A+ +D M+ GC P++V Y ++ CK G+ D A + K+ NV Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
T+ +L + AL + +EM +KG+ P+ ITY+SLISCLC +A LL DM
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
+ P V+++N +I F K ++ E+ ++ M ++ P+ TY LI G EA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 494 MELANALVS 502
+ ++S
Sbjct: 385 KHMFELMIS 393
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+G+ M+ P +N L+S + + D + L M+ + +YNI+I
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
FC+ +I+ ++ +L M + G +P+ T L+ G +G ++A+ L + +V M
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 272/513 (53%), Gaps = 31/513 (6%)
Query: 30 LLSFDVKETQF-MKLIKRSFRA-GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
+LS + T F ++ ++F A + D +L + M +GC P+ V+ LI + +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 88 SNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
N+A++++E + G PD +N +I G CK ++I A K+++R+ RGF+PD +TY
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
++ LC G +++A +F ++ KP ++ + LI + G+ D A +L +M
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 203 --------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
G K+G+VG A + + + ++GC+P+V SY +L+ +GK +E
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 308
++ EM + GL+PN V ++ LIS+ C++ + +AV++ R KG PD Y+++ LIS
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 309 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 368
C+ + A+ L MIS+G + + V YNT++ AF + G +A ++ ++ G P +
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 369 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLV 428
+YN++ L +G+ +A + +ML G P I+ N LI+ LCR GMV+EAV
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 429 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
+M P ++++N +I G C+ RI + + + + +G P+ T+ L+ + GG
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 489 WRAEAMELANALVSMHAISRDTFKRLNRTFPLL 521
+ +A L + + D F +RT+ +L
Sbjct: 684 FVYDACLLLDEGI------EDGFVPNHRTWSIL 710
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 218/424 (51%), Gaps = 22/424 (5%)
Query: 96 EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
++L + P +F + ++ FC N+I+ A +L + G P+ V Y +I SL
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
+ A ++ +++ C P T+ +I + ++A K+++ M
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI-S 257
G+CK G V A + L R +P+++ +N L+ + G+ ++ + ++++M+ S
Sbjct: 327 YLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
G+ P+V TY+ LI ++G A++VL + KG P+ YSY L+ +CK G++D
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
A L+ M +DG P+ V +N +++AFCK +A+EIF ++ GC P+V ++N++ S
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
L + AL ++ +M+S+G+ + +TYN+LI+ R G + EA L+ +M
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
I+YN +I G C+ ++++ + M G P+ + +LI G+ G EA+E
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 498 NALV 501
+V
Sbjct: 623 KEMV 626
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 20/384 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
F LI G+ D++ + MV + G PDV LI +++E A+ V+ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 99 EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
G +P+V++Y L+ GFCK +I+ A VL+ + + G P+ V +N +I + C I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
A ++F ++ R CKP V T+ LI G+C+ + A +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLIS------------------GLCEVDEIKHALWLL 517
Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
R + S G + ++YN L+ L G+ +E KL+ EM+ +G + +TY+ LI LCR
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
G+ + A + G P S + LI+ C+ G ++ A+EF M+ G PDIV +
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
N+++ C+ G + L +F KL G PP+ ++NT+ S L G A ++ E +
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Query: 398 KGIEPDEITYNSLISCLCRDGMVD 421
G P+ T++ L+ + +D
Sbjct: 698 DGFVPNHRTWSILLQSIIPQETLD 721
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 162/331 (48%), Gaps = 18/331 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
+ LI ++ G +L + M GCKP+V T L+ F + K ++A V+ +
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
G +P+ +N LIS FCK ++I A ++ + +G PDV T+N +I LC I+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A + ++ + +TY LI A + G+ +A KL++EM
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G+C+ G V +A + G P IS N+L+ L G EE + EM+ RG
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
P++VT++ LI+ LCR G+ ED + + R + +G+ PD +++ L+S CK G + A
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
LD I DG +P+ ++ +L + D+
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 59/398 (14%)
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G+ Y ++IG L + G FK D+LL ++ L + M + DKA
Sbjct: 106 GYRHSFDVYQVLIGKLGANG----EFKTIDRLLIQMKDEGIVFKESLFISIMRD--YDKA 159
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
G GQ + + + + C+P SYN++L L++ + + +
Sbjct: 160 ------------GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
M+SR + P + T+ +++ + C + + A+ +LR + G P++ Y LI + K R
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 315 LDLAIEFLDYMISDGCLPDI-----------------------------------VNYNT 339
++ A++ L+ M GC+PD + Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SK 398
++ CK G D A ++F ++ P + +NT+ + G A ++S+M+ S
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
GI PD TYNSLI ++G+V A+ +L DM + +P V SY I++ GFCK +I+E+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
VL M G KPN + LI EA+E+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 246/477 (51%), Gaps = 18/477 (3%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+F KL+ + KFD + F E M G ++ +I + + + A+ ++
Sbjct: 66 VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+ K G P + N+L++GFC N+I A ++D++ G+ PD VT+ ++ L
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
A + ++++ C+P ++TY +I G+ D A+ LL++M
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
+CK V A ++++G +PDV +Y+ L+ L N G+W + +L+++M+ R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
+ PNVVT++ LI + ++GK +A + ++ + P+ +Y+ LI+ +C RLD A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
+ M+S CLPD+V YNT++ FCK +E+F +S G N +Y T+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
+ + D A + +M+S G+ P+ +TYN+L+ LC++G +++A+ + ++ ++ P +
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+YNI+ G CK ++ + ++ ++ KG KP+ Y +I G G + EA L
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 226/455 (49%), Gaps = 19/455 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
+ E++ ++ MV G +PD V T L+ FQ K+++AV ++E ++ K +PD+
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y A+I+G CK + +LA +L+++ DVV Y+ +I SLC ++ A +F ++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
+P V TY+ LI G+ A +LL +M LE R P
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-----------------LE-RKINP 308
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+V+++N L+ GK E EKL EMI R ++PN+VTY+ LI+ C + ++A +
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
K PD +Y+ LI+ +CK ++ +E M G + + V Y T++ F +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
+ D A +F+++ G PN+ +YNT+ L +G +A+ + + +EPD TY
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N + +C+ G V++ L + +P VI+YN +I GFCK E+ + M E
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
G P+ TY LI G +A + EL + S
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 210/460 (45%), Gaps = 54/460 (11%)
Query: 17 RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
R+S + + + F L+ F+ K E++ +E MV GC+PD+V
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 77 KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
+I + + + A+ ++ +EK E DV Y+ +I CK ++ A + + ++
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G PDV TY+ +I LC+ G A ++ +L P V+T+ LI A EG+ +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 196 MKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRT 238
KL DEM G C + +A Q + S+ C PDV++YN L+
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 239 LLNMGKWEEGEKLM-----------------------------------TEMISRGLEPN 263
K +G +L +M+S G+ PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
++TY+ L+ LC++GK E A+ V ++ + PD Y+Y+ + CK G+++ +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
+ G PD++ YNT+++ FCK G ++A +F K+ + G P+ +YNT+ A G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
DK + +I EM S D TY L++ + DG +D+
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 18/346 (5%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
++ A +F ++++ P+++ ++ L+ A MK D F
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAI-------AKMKKFD-----------LVISF 87
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
+E G ++ +YN+++ L + ++ +M+ G P++VT + L++ C
Sbjct: 88 GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ +AV ++ E G PD ++ L+ + + A+ ++ M+ GC PD+V
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
Y ++ CK G D AL + K+ +V Y+T+ +L AL + +EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
+KGI PD TY+SLISCLC G +A LL DM + P V+++N +I F K ++
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
E+ ++ M ++ PN TY LI G EA ++ +VS
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 1/267 (0%)
Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
L R L K +E L EM+ P++V +S L+S++ + K + + + G
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
++ + Y+Y+ +I+ C+ +L A+ L M+ G P IV N++L FC +A+
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
+ +++ ++G P+ ++ T+ L+ A+ ++ M+ KG +PD +TY ++I+ L
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
C+ G D A+ LL ME + V+ Y+ +I CK R +++++ + M KG +P+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 475 TTYVLLIEGI-GYGGWRAEAMELANAL 500
TY LI + YG W + L++ L
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDML 302
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 55/116 (47%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+ + EM+ P + ++ L+S + + D + ME + +YNI+I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
C+ +++ ++ +L M + G P+ T L+ G +G +EA+ L + +V M
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 249/488 (51%), Gaps = 25/488 (5%)
Query: 24 TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
+RP L+ F +L R ++D L + M G ++ + +I
Sbjct: 66 SRPRPRLIDFS-------RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 84 QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
+ RK + A M + K G EPD ++ LI+G C ++ A +++DR+ G P ++
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
T N ++ LC G + A + D+++ +P +TY +++ GQT AM+LL +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
G+CK G + AF +E +G + D+I Y L+R G+W
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
++G KL+ +MI R + P+VV +S LI ++GK +A ++ + ++G++PD +Y L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
I +CK+ +LD A LD M+S GC P+I +N ++ +CK D LE+F K+S G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
+ +YNT+ G A + EM+S+ + PD ++Y L+ LC +G ++A+
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
+ +E ++ + YNIII G C +++++ ++ ++ KG KP+ TY ++I G+
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 486 YGGWRAEA 493
G +EA
Sbjct: 539 KKGSLSEA 546
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 192/399 (48%), Gaps = 18/399 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P + ++ L S + Q +L + ++ +G + ++ T +IMI C + AF
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P +T++ LI LEG+ +A++L+D M
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM------------------VEM 171
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +P +I+ N L+ L GK + L+ M+ G +PN VTY ++ +C+ G+T A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
+++LR +E+ + DA Y +I CKDG LD A + M G DI+ Y T++
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
FC G D ++ + P+V +++ + G A + EM+ +GI PD
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
+TY SLI C++ +D+A +L M S P + ++NI+I G+CK I++ +E+
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
M +G + TY LI+G G A EL +VS
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 174/355 (49%), Gaps = 19/355 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
+ LI+ AG++D+ + M+ PDVV + LI F +E K +A + E++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 99 EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
++ PD Y +LI GFCK NQ++ AN +LD + S+G P++ T+NI+I C +I+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
++F ++ +TY LIQ G C+ G + A + +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQ------------------GFCELGKLEVAKELFQ 446
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+ SR +PD++SY +LL L + G+ E+ ++ ++ +E ++ Y+I+I +C
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
K +DA D+ + KG+ PD +Y+ +I CK G L A M DG P+ YN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
++ A G+A ++ ++ E++ G + S+ + L K L M+S
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 135/272 (49%)
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
+SY LR+ + K ++ L EM P ++ +S L S + R + + +D+ +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
+ KG+ + Y+ +I+ C+ +L LA + +I G PD V ++T++ C G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
+ALE+ +++ ++G P + + N + + L +G A+ +I M+ G +P+E+TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
++ +C+ G A+ LL ME + + + Y+III G CK ++ + + M KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
K + Y LI G Y G + +L ++
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
+SDG V+Y L + + D A+++F++++ P + ++ +FS + +
Sbjct: 31 VSDG--KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQY 88
Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
L + +M KGI + T + +I+C CR + A + + + P ++++ +
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
I G C R++E++E++ M E G KP T L+ G+ G ++A+ L + +V
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 242/474 (51%), Gaps = 23/474 (4%)
Query: 24 TRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFF 83
R ++ + D++E +L K R K ++++ MV + P +V +L+
Sbjct: 41 VRASSSVSGGDLRE----RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIV 96
Query: 84 QERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
+ +K + + + + +E G D++ +N +I+ FC Q+ LA +L ++ G+ PD V
Sbjct: 97 KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156
Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
T ++ C R + A + D+++ KP ++ Y +I +
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS----------------- 199
Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
+CK V AF F + +E +G +P+V++Y L+ L N +W + +L+++MI + + P
Sbjct: 200 -LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
NV+TYS L+ + ++GK +A ++ + PD +Y LI+ C R+D A +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
D M+S GCL D+V+YNT++ FCK + +++F ++S G N +YNT+ + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISY 442
GD +A S+M GI PD TYN L+ LC +G +++A+ + DM+ +++Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 443 NIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+I G CKT ++ E+ + ++ KG KP+ TY ++ G+ G E L
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 227/459 (49%), Gaps = 26/459 (5%)
Query: 19 SSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKL 78
S ++RP ++ F+ +L+ + K+D + + M G + D+ +
Sbjct: 74 SDMVKSRPFPSIVDFN-------RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 79 IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
I F + + A+ ++ + K G EPD +L++GFC+ N++ A ++D++ G+
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
PD+V YN +I SLC + AF F ++ R +P V+TYT L+
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN------------- 233
Query: 198 LLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
G+C A + + + + P+VI+Y+ LL + GK E ++L EM+
Sbjct: 234 -----GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
++P++VTYS LI+ LC + ++A + KG D SY+ LI+ +CK R++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
++ M G + + V YNT++ F + G+ D+A E F ++ G P++ +YN +
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
L +G+ +AL + +M + ++ D +TY ++I +C+ G V+EA L + +P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 476
+++Y ++ G C ++E + M ++G N+ T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 135/268 (50%)
Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
L +T L K + L ++M+ P++V ++ L+S++ + K + + + + + G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
+ D Y+++ +I+ +C ++ LA+ L M+ G PD V +++ FC+ A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
+ +K+ ++G P++ +YN + +L + A E+ KGI P+ +TY +L++ L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
C +A LL DM + P VI+Y+ ++ F K ++ E+ E+ M P+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 475 TTYVLLIEGIGYGGWRAEAMELANALVS 502
TY LI G+ EA ++ + +VS
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVS 323
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 31 LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
+S D + LI + DE+ + MV+ GC DVV LI F + ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 91 AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
+++ + + G + YN LI GF +A ++ A + ++ G SPD+ TYNI++G
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGM 209
LC G +E A +F+ + + ++TYT +I+ GMCK G
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR------------------GMCKTGK 450
Query: 210 VGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
V +A+ SL +G +PD+++Y ++ L G E E L T+M GL N T S
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%)
Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
RD K DA+D+ + P ++ L+SA K + D+ I M G D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
+N ++ FC AL I K+ +G P+ + ++ + A+ ++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
+ G +PD + YN++I LC+ V++A ++E RP V++Y ++ G C + R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
+++ +L+ M +K PN TY L++ G EA EL +V M
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 244 bits (624), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 246/465 (52%), Gaps = 18/465 (3%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+F KL+ + KFD + E M + LI F + + + A+ ++
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+ K G EP + ++L++G+C +I A ++D++ G+ PD +T+ +I L
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
A + D++++ C+P ++TY +++ G TD A+ LL++M
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
+CK V A + +E++G +P+V++Y+ L+ L + G+W + +L+++MI +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
+ PN+VT++ LI + ++GK +A + ++ + PD ++Y+ L++ +C RLD A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
+ ++M+S C PD+V YNT++ FCK+ + E+F ++S G + +Y T+ L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
+ GD A + +M+S G+ PD +TY+ L+ LC +G +++A+ + M+ + + +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
Y +I G CK ++++ ++ ++ KG KPN TY +I G+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 202/414 (48%), Gaps = 18/414 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI F K E++ ++ MV GC+P++V ++ + ++ A+ ++ +E
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
E DV +N +I CK ++ A + + ++G P+VVTY+ +I LCS G
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ ++ P ++T+ LI A + EG+ +A KL D+M
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G C + +A Q + S+ C PDV++YN L++ + E+G +L EM RGL
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
+ VTY+ LI L DG ++A V + G+ PD +Y L+ C +G+L+ A+E
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
DYM DI Y T++ CK G D ++F LS G PNV +YNTM S L S
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
A ++ +M G P+ TYN+LI RDG + L+ +M S RF
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 18/399 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P + +N L+S K + ++ + ++++ + TYNI+I C R I A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P+++T + L+ G C + A V +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLN------------------GYCHGKRISDAVALVDQMVEM 184
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD I++ L+ L K E L+ M+ RG +PN+VTY ++++ LC+ G T+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
+++L + + D ++ +I + CK +D A+ M + G P++V Y+++++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
C G A ++ + + PN+ ++N + A G + A + +M+ + I+PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
TYNSL++ C +D+A + M S P V++YN +I GFCK++R+ + E+
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
M +G + TY LI+G+ + G A ++ +VS
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 31/345 (8%)
Query: 2 STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
S+++SC+ S+ +S E + N +L++F+ LI + GKF E+
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 351
Query: 59 FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFC 117
+ M+ PD+ L+ F + +KA ++ E ++ K PDV YN LI GFC
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
K+ ++E ++ + RG D VTY +I L G ++A KVF Q++ D P ++
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
TY+IL+ G+ +KA+++ D M GMCK G V + SL
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
+G +P+V++YN ++ L + +E L+ +M G PN TY+ LI + RDG
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
+ +++R + DA S L++ DGRLD + FLD +
Sbjct: 592 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 633
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 142/271 (52%), Gaps = 2/271 (0%)
Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
Y +LR L+ K ++ L M+ P++V ++ L+S++ + K + + + +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
+ Y+Y+ LI+ +C+ ++ LA+ L M+ G P IV +++L +C
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
A+ + +++ ++G P+ ++ T+ L+ A+ ++ M+ +G +P+ +TY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
+ LC+ G D A+ LL ME+ + V+ +N II CK R +++++ + M KG +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 472 PNETTYVLLIEGI-GYGGWRAEAMELANALV 501
PN TY LI + YG W ++A +L + ++
Sbjct: 293 PNVVTYSSLISCLCSYGRW-SDASQLLSDMI 322
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+G+ M+ P + +N L+S + + D + L M+ + +YNI+I
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
FC+ +I+ ++ +L M + G +P+ T L+ G +G ++A+ L + +V M
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 245/464 (52%), Gaps = 18/464 (3%)
Query: 39 QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
+F KL+ + KFD + E M G ++ LI F + + + A+ ++ +
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 99 EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
K G EP + ++L++G+C +I A ++D++ G+ PD +T+ +I L
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
A + D++++ C+P ++TY +++ G D A LL++M
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
+CK V A + +E++G +P+V++Y+ L+ L + G+W + +L+++MI + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
PN+VT++ LI + ++GK +A + ++ + PD ++Y+ LI+ +C RLD A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
++M+S C PD+ YNT++ FCK+ + E+F ++S G + +Y T+ L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
GD A + +M+S G+ PD +TY+ L+ LC +G +++A+ + M+ + + +
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
Y +I G CK ++++ ++ ++ KG KPN TY +I G+
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 199/414 (48%), Gaps = 18/414 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI F K E++ ++ MV GC+P++V ++ + + A ++ +E
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
E DV +N +I CK ++ A + + ++G P+VVTY+ +I LCS G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ ++ P ++T+ LI A + EG+ +A KL D+M
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G C + +A Q + S+ C PD+ +YN L++ + E+G +L EM RGL
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
+ VTY+ LI L DG ++A V + G+ PD +Y L+ C +G+L+ A+E
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
DYM DI Y T++ CK G D ++F LS G PNV +YNTM S L S
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
A ++ +M G PD TYN+LI RDG + L+ +M S RF
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 195/399 (48%), Gaps = 18/399 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P +F +N L+S K + +L + ++++ G S ++ TYNI+I C R I A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P+++T + L+ G C + A V +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLN------------------GYCHGKRISDAVALVDQMVEM 109
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD I++ L+ L K E L+ M+ RG +PN+VTY ++++ LC+ G + A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
++L + + D ++ +I + CK +D A+ M + G P++V Y+++++
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
C G A ++ + + PN+ ++N + A G + A + +M+ + I+PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
TYNSLI+ C +D+A + M S P + +YN +I GFCK++R+ + E+
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
M +G + TY LI+G+ + G A ++ +VS
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 166/345 (48%), Gaps = 31/345 (8%)
Query: 2 STVVSCI---NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLY 58
S+++SC+ S+ +S E + N +L++F+ LI + GKF E+
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA-------LIDAFVKEGKFVEAEK 276
Query: 59 FIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKYGEPDVFAYNALISGFC 117
+ M+ PD+ LI F + +KA ++ E + K PD+ YN LI GFC
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
K+ ++E ++ + RG D VTY +I L G ++A KVF Q++ D P ++
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 178 TYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSL 220
TY+IL+ G+ +KA+++ D M GMCK G V + SL
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
+G +P+V++YN ++ L + +E L+ +M G P+ TY+ LI + RDG
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
+ +++R + DA S L++ DGRLD + FLD +
Sbjct: 517 AASAELIREMRSCRFVGDA-STIGLVANMLHDGRLDKS--FLDML 558
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%)
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
M+ LP I +N +L+A K D + + EK+ +G N+ +YN + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
AL ++ +M+ G EP +T +SL++ C + +AV L+ M +RP I++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
+I G + +E++ ++ M ++GC+PN TY +++ G+ G A L N +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
P +N L+S + + D + L M+ + +YNI+I FC+ +I+ ++ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
L M + G +P+ T L+ G +G ++A+ L + +V M
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 109
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 233/469 (49%), Gaps = 21/469 (4%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
E F +++ G D +L E MV GC V ++ F +E + A+ ++
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 97 ILEKYGE--PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
+ PD + +N L++G CKA ++ A +++D + G+ PDV TYN +I LC
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------ 202
G ++ A +V DQ++ +C P +TY LI E Q ++A +L +
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 203 -----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 257
G+C A + + S+GC+PD +YNML+ +L + GK +E ++ +M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 258 RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
G +V+TY+ LI C+ KT +A ++ + G++ ++ +Y+ LI CK R++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
A + +D MI +G PD YN++L FC+ G+ +A +I + ++ GC P++ +Y T+ S
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFR 436
L +G A ++ + KGI YN +I L R EA+ L +M E
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 437 PTVISYNIIILGFCKTR-RINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
P +SY I+ G C I E+++ L + EKG P ++ +L EG+
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 261/514 (50%), Gaps = 25/514 (4%)
Query: 9 NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
P + +R+ + A +PN F + + +++ R R+G FD+ +E M ++ C
Sbjct: 60 QPDDSAALRLFNLASKKPN-----FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 69 KPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYG-EPDVFAYNALISGFCKANQIELAN 126
+ LI+ + Q ++ + V++ +++++G +PD YN +++ N ++L
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 174
Query: 127 KVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQAT 186
++ G PDV T+N++I +LC + A + + + P T+T ++Q
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 187 MLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESR-GCQPD 228
+ EG D A+++ ++M G CK+G V A F++ + ++ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
++N L+ L G + ++M M+ G +P+V TY+ +IS LC+ G+ ++AV+VL
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
+ +P+ +Y+ LIS CK+ +++ A E + S G LPD+ +N+++ C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
N A+E+FE++ GC P+ +YN + +L S G AL M+ +M G ITYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
+LI C+ EA + +ME ++YN +I G CK+RR+ ++ +++ M +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
G KP++ TY L+ GG +A ++ A+ S
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 239/474 (50%), Gaps = 20/474 (4%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+ F LIK RA + ++ +E M + G PD T +++ + +E + A+R+ E
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR-GFSPDVVTYNIMIGSLCSRG 155
+ ++G + N ++ GFCK ++E A + + ++ GF PD T+N ++ LC G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
++ A ++ D +L++ P V TY +I G+CK G V +A +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVIS------------------GLCKLGEVKEAVE 351
Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
+ + +R C P+ ++YN L+ TL + EE +L + S+G+ P+V T++ LI LC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
A+++ + KG PD ++Y+ LI + C G+LD A+ L M GC ++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
YNT++ FCK +A EIF+++ G N +YNT+ L S A ++ +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
+ +G +PD+ TYNSL++ CR G + +A ++ M S P +++Y +I G CK R+
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD 509
+ ++L ++ KG Y +I+G+ EA+ L ++ + D
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 238/460 (51%), Gaps = 18/460 (3%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
K D+++ + M+ + P +V ++ + ++ N + + LE G +++ N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
+I+ FC+ + A VL ++ G+ PD T+N +I L G + A + D+++ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
C+P V+TY ++ G T A+ LL +M +C+ G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
+ +E++G + V++YN L+R L GKW +G L+ +M+SR + PNV+T+++L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPD 333
++GK ++A ++ + +G++P+ +Y+ L+ YC RL A LD M+ + C PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
IV + +++ +C D +++F +S G N +Y+ + SG A +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTR 453
EM+S G+ PD +TY L+ LC +G +++A+ + D++ ++ ++ Y II G CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 454 RINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
++ ++ + ++ KG KPN TY ++I G+ G +EA
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 215/418 (51%), Gaps = 19/418 (4%)
Query: 67 GCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGFCKANQIELA 125
G +PD LIK F E K ++AV +++ ++E +PDV YN++++G C++ LA
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 126 NKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQA 185
+L ++ R DV TY+ +I SLC G I++A +F ++ K +V+TY L++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR- 271
Query: 186 TMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
G+CK G ++ + SR P+VI++N+LL + GK
Sbjct: 272 -----------------GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
+E +L EMI+RG+ PN++TY+ L+ C + +A ++L +PD ++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
I YC R+D ++ + G + + V Y+ ++ FC++G A E+F+++ G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 366 PPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVG 425
P+V +Y + L +G +AL + ++ ++ + Y ++I +C+ G V++A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 426 LLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
L + +P V++Y ++I G CK ++E+ +L M E G PN+ TY LI
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)
Query: 86 RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
+K + E++ P + ++ S + Q L +L G + ++ T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
IMI C A+ V ++++ +P T+ LI+ LEG+ +A+ L+D M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM--- 184
Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
GCQPDV++YN ++ + G L+ +M R ++ +V
Sbjct: 185 ---------------VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
TYS +I SLCRDG + A+ + + + KG+ +Y+ L+ CK G+ + L M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
+S +P+++ +N +L F K G +A E+++++ G PN+ +YNT+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
A M+ M+ PD +T+ SLI C VD+ + + ++ ++Y+I+
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+ GFC++ +I + E+ M G P+ TY +L++G+ G +A+E+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 19/367 (5%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK-AVRVMEILEKYGEPDVF 107
R G D ++ + M G K VV L++ + K N A+ + +++ + P+V
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
+N L+ F K +++ AN++ + +RG SP+++TYN ++ C + + A + D +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
+R+ C P ++T+T LI+ + + D MK+ R++ RG
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF------------------RNISKRGLVA 401
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+ ++Y++L++ GK + E+L EM+S G+ P+V+TY IL+ LC +GK E A+++
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
++ + Y +I CK G+++ A + G P+++ Y +++ CK
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
G+ +A + K+ + G PN +YNT+ A GD + +I EM S G D +
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Query: 408 NSLISCL 414
+I L
Sbjct: 582 KMVIDML 588
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 248/489 (50%), Gaps = 21/489 (4%)
Query: 33 FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
F V + ++ + G + + F+ ++ G D + T L+ F + A+
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL 250
Query: 93 RVMEILEK--YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
+V +++ K P+ +Y+ LI G C+ ++E A + D++ +G P TY ++I +
Sbjct: 251 KVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310
Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------- 202
LC RG+I+ AF +FD+++ CKP V TYT+LI +G+ ++A + +M
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 203 ---------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMT 253
G CK G V AF+ + +E R C+P+V ++N L+ L +GK + L+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 254 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 313
M+ GL P++V+Y++LI LCR+G A +L + + PD ++ +I+A+CK G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 314 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 373
+ D+A FL M+ G D V T++ CK G AL I E L + S N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 374 TMFSALWSSGDKIR-ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMES 432
+ L S G K++ L M+ ++ G+ P +TY +L+ L R G + + +L M+
Sbjct: 551 VILDML-SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 433 TRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
+ P V Y III G C+ R+ E+ ++L+AM + G PN TY ++++G G
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 493 AMELANALV 501
A+E A+V
Sbjct: 670 ALETVRAMV 678
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 19/400 (4%)
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
Y++L+ K + LA R+ + GF ++ Y ++ +LC G E+A ++L
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR-GCQP 227
+ +L+ ++ L G C+ + A + + C P
Sbjct: 223 K--------------IGFVLDSHIGTSLLL----GFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+ +SY++L+ L +G+ EE L +M +G +P+ TY++LI +LC G + A ++
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
+G P+ ++Y LI C+DG+++ A M+ D P ++ YN ++ +CK+
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
G A E+ + C PNV ++N + L G +A+ ++ ML G+ PD ++Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N LI LCR+G ++ A LL M P +++ II FCK + + + L M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAIS 507
KG +E T LI+G+ G +A+ + LV M ++
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/571 (22%), Positives = 236/571 (41%), Gaps = 109/571 (19%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
LI G+ +E+ + M GC+P T LIK +KA + E++ +
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
+P+V Y LI G C+ +IE AN V ++ P V+TYN +I C G + AF
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
++ + + CKP V T+ L++ G+ KA+ LL M G+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
C++G + A++ + S+ +PD +++ ++ GK + + M+ +G+ +
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 265 VTYSILISSLCRDGKTEDAVDVLRA-------------------------AKEK------ 293
VT + LI +C+ GKT DA+ +L KE+
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 294 ----GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
GL P +Y L+ + G + + L+ M GCLP++ Y I+ C+ G
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
++A ++ + D G PN +Y M ++G RAL + M+ +G E ++ Y+S
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 410 L-----------------------------------------------------ISCLCR 416
L ++ LC+
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCK 751
Query: 417 DGMVDEAVGLLVD-MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNET 475
+G DE+ L+ + +E F + +II+ +C ++ + +E++ + + G P+
Sbjct: 752 EGRTDESNDLVQNVLERGVFLEKAM--DIIMESYCSKKKHTKCMELITLVLKSGFVPSFK 809
Query: 476 TYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
++ L+I+G+ G A EL L++ + +
Sbjct: 810 SFCLVIQGLKKEGDAERARELVMELLTSNGV 840
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 192/473 (40%), Gaps = 76/473 (16%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +L++ R GK ++++ ++ M+ NG PD+V LI +E N A +++ +
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
+ EPD + A+I+ FCK + ++A+ L + +G S D VT +I +C G
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 159 SAFKVFDQL------------------LRDNCK-----------------PTVITYTILI 183
A + + L L CK P+V+TYT L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 184 QATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQ 226
+ G + ++L+ M G+C+ G V +A + + +++ G
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
P+ ++Y ++++ +N GK + + + M+ RG E N YS L+ K D +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 287 LRAAKEKGLTPDAYSYDPLISA------------------YCKDGRLDLAIEFLDYMISD 328
+ D + LIS CK+GR D + + + ++
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
G + + I+ ++C + +E+ + G P+ S+ + L GD RA
Sbjct: 769 GVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRD---GMVDEAVGLLVDMESTRFRPT 438
++ E+L+ ++ + + CL G E + LVD R RPT
Sbjct: 828 RELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVID-LVDQLHCRERPT 879
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 229/459 (49%), Gaps = 26/459 (5%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE----P 104
RAG+ D + +++ G + D + T L+K +++++ A+ + +L + E P
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI--VLRRMTELGCIP 156
Query: 105 DVFAYNALISGFCKANQIELANKVLDRL---RSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
+VF+YN L+ G C N+ + A ++L + R G PDVV+Y +I G + A+
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
+ ++L P V+TY +I A DKAM++L+ M G
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
C G +A F++ + S G +PDV++Y++L+ L G+ E K+ M RGL+P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
TY L+ G + +L G+ PD Y + LI AY K G++D A+
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
M G P+ V Y ++ CK+G + A+ FE++ D G P YN++ L +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
RA +I EML +GI + I +NS+I C++G V E+ L M +P VI+YN
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
+I G+C +++E++++L+ M G KPN TY LI G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 242/465 (52%), Gaps = 19/465 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
+ +I F+ G D++ M+ G PDVV +I + + +KA+ V+ +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G PD YN+++ G+C + Q + A L ++RS G PDVVTY++++ LC G
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
A K+FD + + KP + TY L+Q +G + LLD M VR
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--------------VR 364
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+ G PD +++L+ GK ++ + ++M +GL PN VTY +I LC+ G
Sbjct: 365 N----GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
+ EDA+ ++GL+P Y+ LI C + + A E + M+ G + + +N
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
+I+ + CK G ++ ++FE + +G PNV +YNT+ + +G A+ ++S M+S
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
G++P+ +TY++LI+ C+ +++A+ L +MES+ P +I+YNII+ G +TRR +
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 459 IEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
E+ + E G + +TY +++ G+ +A+++ L M
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 228/443 (51%), Gaps = 19/443 (4%)
Query: 55 ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVFAYNALI 113
E L+ + G PDVV T +I FF+E S+KA E+L++ PDV YN++I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238
Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
+ CKA ++ A +VL+ + G PD +TYN ++ CS G + A ++ D +
Sbjct: 239 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVE 298
Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
P V+TY++L+ +CK G +A + S+ RG +P++ +Y
Sbjct: 299 PDVVTYSLLMDY------------------LCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
LL+ G E L+ M+ G+ P+ +SILI + + GK + A+ V +++
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
GL P+A +Y +I CK GR++ A+ + + MI +G P + YN+++ C ++A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
E+ ++ D G N +N++ + G I + + M+ G++P+ ITYN+LI+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
C G +DEA+ LL M S +P ++Y+ +I G+CK R+ +++ + M G P+
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 474 ETTYVLLIEGIGYGGWRAEAMEL 496
TY ++++G+ A A EL
Sbjct: 581 IITYNIILQGLFQTRRTAAAKEL 603
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 16/382 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK- 162
PD+ Y LI C+A +++L L + +GF D + + ++ LC+ A
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
V ++ C P V +Y IL++ E ++ +A++LL M + G
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG-------------- 190
Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
G PDV+SY ++ G ++ EM+ RG+ P+VVTY+ +I++LC+ +
Sbjct: 191 -GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK 249
Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
A++VL + G+ PD +Y+ ++ YC G+ AI FL M SDG PD+V Y+ ++
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
CKNG +A +IF+ ++ G P +++Y T+ + G + G++ M+ GI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369
Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
D ++ LI + G VD+A+ + M P ++Y +I CK+ R+ +++
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 463 AAMFEKGCKPNETTYVLLIEGI 484
M ++G P Y LI G+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGL 451
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 154/284 (54%), Gaps = 14/284 (4%)
Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVD- 285
PD+ +Y +L+ G+ + G + +I +G + + ++ L+ LC D +T DA+D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 286 VLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILA 342
VLR E G P+ +SY+ L+ C + R A+E L M D G PD+V+Y T++
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
F K G++D+A + ++ D G P+V +YN++ +AL + +A+ +++ M+ G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
D +TYNS++ C G EA+G L M S P V++Y++++ CK R E+ ++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
+M ++G KP TTY L++G G ALV MH +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKG----------ALVEMHGL 358
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 21/376 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI + GK D+++ M G P+ V +I + + A+ E +
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
G P YN+LI G C N+ E A +++ + RG + + +N +I S C G +
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
+ K+F+ ++R KP VITY LI L G+ D+AMKLL M
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G CK + A + +ES G PD+I+YN++L+ L + ++L + G +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
+ TY+I++ LC++ T+DA+ + + L +A +++ +I A K GR D A +
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
S+G +P+ Y + G ++ ++F + D GC + N + L
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 382 SGDKIRA---LGMISE 394
G+ RA L MI E
Sbjct: 734 RGEITRAGTYLSMIDE 749
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG--LTPDAYSYD 303
E+ + E++ RG ++ + ++ + RD R A+ +TPD +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 304 PLISAYCKDGRLDL----------------AIEF--------------------LDYMIS 327
LI C+ GRLDL AI F L M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD---VGCPPNVSSYNTMFSALWSSGD 384
GC+P++ +YN +L C + +ALE+ ++D G PP+V SY T+ + + GD
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
+A EML +GI PD +TYNS+I+ LC+ +D+A+ +L M P ++YN
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
I+ G+C + + E+I L M G +P+ TY LL++ + G EA ++ +++
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 18/243 (7%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
AGK DE++ + MV+ G KP+ V + LI + + + A+ + + +E G PD+
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
YN ++ G + + A ++ R+ G ++ TYNI++ LC + + A ++F L
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMG------------MCKKGMVGQAF-- 214
+ K T+ I+I A + G+ D+A L + + ++GQ
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 215 ---QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
Q S+E GC D N ++R LL G+ ++ + + T S+ I
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763
Query: 272 SSL 274
L
Sbjct: 764 DLL 766
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 222/419 (52%), Gaps = 22/419 (5%)
Query: 95 MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
ME+LE P+++ YN +++G+CK +E AN+ + ++ G PD TY +I C R
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
++SAFKVF+++ C+ + YT LI + + D+AM L
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL---------------- 310
Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
FV+ ++ C P V +Y +L+++L + E L+ EM G++PN+ TY++LI SL
Sbjct: 311 -FVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
C K E A ++L EKGL P+ +Y+ LI+ YCK G ++ A++ ++ M S P+
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
YN ++ +CK+ N +A+ + K+ + P+V +YN++ SG+ A ++S
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
M +G+ PD+ TY S+I LC+ V+EA L +E P V+ Y +I G+CK +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH---AISRDT 510
++E+ +L M K C PN T+ LI G+ G EA L +V + +S DT
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 230/464 (49%), Gaps = 23/464 (4%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
E + LI A + DE++ M + C P V T LIK + ++A+ +++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 97 ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
+E+ G +P++ Y LI C + E A ++L ++ +G P+V+TYN +I C RG
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
MIE A V + + P TY LI+ G CK V +A
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIK------------------GYCKSN-VHKAMG 448
Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
+ + R PDV++YN L+ G ++ +L++ M RGL P+ TY+ +I SLC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
+ + E+A D+ + ++KG+ P+ Y LI YCK G++D A L+ M+S CLP+ +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
+N ++ C +G +A + EK+ +G P VS+ + L GD A +M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
LS G +PD TY + I CR+G + +A ++ M P + +Y+ +I G+ +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI---GYGGWRAEAMEL 496
N + +VL M + GC+P++ T++ LI+ + YG + EL
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 38/498 (7%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EIL 98
+ LI + G ++++ +E M + P+ +LIK + + +KA+ V+ ++L
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 99 EKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
E+ PDV YN+LI G C++ + A ++L + RG PD TY MI SLC +E
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A +FD L + P V+ YT LI G+ D+A +L++M
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G+C G + +A + G QP V + +L+ LL G ++ +M+S G +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
P+ TY+ I + CR+G+ DA D++ +E G++PD ++Y LI Y G+ + A +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 322 LDYMISDGCLPDIVNYNTIL---------------AAFCKNGNA---DQALEIFEKLSDV 363
L M GC P + +++ C N D +E+ EK+ +
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEML-SKGIEPDEITYNSLISCLCRDGMVDE 422
PN SY + + G+ A + M ++GI P E+ +N+L+SC C+ +E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
A ++ DM P + S ++I G K V + + G +E + ++I+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 483 GIGYGGWRAEAMELANAL 500
G+G G EL N +
Sbjct: 875 GVGKQGLVEAFYELFNVM 892
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 20/407 (4%)
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
YN L++ + ++ +V + P++ TYN M+ C G +E A + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
P TYT LI MG C++ + AF+ + +GC+ +
Sbjct: 246 EAGLDPDFFTYTSLI------------------MGYCQRKDLDSAFKVFNEMPLKGCRRN 287
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
++Y L+ L + +E L +M P V TY++LI SLC + +A+++++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
+E G+ P+ ++Y LI + C + + A E L M+ G +P+++ YN ++ +CK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
+ A+++ E + PN +YN + + + +A+G++++ML + + PD +TYN
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
SLI CR G D A LL M P +Y +I CK++R+ E+ ++ ++ +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRD-TFKRL 514
G PN Y LI+G G EA + ++S + + TF L
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 235/449 (52%), Gaps = 25/449 (5%)
Query: 22 AETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKK 81
A++RP ++ +F KL+ + KFD + F E M G ++ LI
Sbjct: 70 AQSRPFPSII-------EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122
Query: 82 FFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPD 140
F + + + A+ ++ + K G EPD+ N+L++GFC N+I A ++D++ G+ PD
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182
Query: 141 VVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
VT+ +I L A + D++++ C+P ++TY ++ G TD A+ LL+
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242
Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
+M +CK A +E++G +P+VI+Y+ L+ L N G
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
+W + +L+++MI R + PN+VT+S LI + + GK A + ++ + P+ ++Y
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 304 PLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDV 363
LI+ +C RL A + L+ MI CLP++V YNT++ FCK D+ +E+F ++S
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 364 GCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
G N +Y T+ + + D A + +M+S G+ P+ +TYN L+ LC++G + +A
Sbjct: 423 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Query: 424 VGLLVDMESTRFRPTVISYNIIILGFCKT 452
+ + ++ + P + +YNI+I G CK
Sbjct: 483 MVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 181/380 (47%), Gaps = 18/380 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P + ++ L+S K N+ +L +++ G S ++ TYNI+I C + A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P ++T L+ G C + A V +
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLN------------------GFCHGNRISDAVALVDQMVEM 177
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD +++ L+ L K E L+ M+ RG +P++VTY +++ LC+ G T+ A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
+++L + + + Y +I + CK D A+ M + G P+++ Y+++++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
C G A + + + PN+ +++ + A G ++A + EM+ + I+P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
TY+SLI+ C + EA +L M P V++YN +I GFCK +R+++ +E+
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 464 AMFEKGCKPNETTYVLLIEG 483
M ++G N TY LI G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHG 437
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 146/273 (53%)
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD+++ N LL + + + L+ +M+ G +P+ VT++ LI L K +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
V ++ ++G PD +Y +++ CK G DLA+ L+ M + ++V Y+T++ +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
CK + D AL +F ++ + G PNV +Y+++ S L + G A ++S+M+ + I P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
+T+++LI + G + +A L +M P + +Y+ +I GFC R+ E+ ++L
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
M K C PN TY LI G + MEL
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 137/259 (52%), Gaps = 1/259 (0%)
Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
Y +LRT L+ + ++ L M P+++ +S L+S++ + K + + +
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
G++ + Y+Y+ LI+ +C+ RL LA+ L M+ G PDIV N++L FC
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
A+ + +++ ++G P+ ++ T+ L+ A+ +I M+ +G +PD +TY +++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
+ LC+ G D A+ LL ME+ + V+ Y+ +I CK R ++++ + M KG +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 472 PNETTYVLLIEGI-GYGGW 489
PN TY LI + YG W
Sbjct: 286 PNVITYSSLISCLCNYGRW 304
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
G++ ++ + M+ P++V + LI F ++ K KA ++ E ++++ +P++F Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
++LI+GFC +++ A ++L+ + + P+VVTYN +I C ++ ++F ++ +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
+TYT LI D A + +M G+CK G + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 248
A L+ +PD+ +YN+++ + GKW+ G
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%)
Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
+Y Y ++ D LD AI M P I+ ++ +L+A K D + E
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
K+ +G N+ +YN + + AL ++ +M+ G EPD +T NSL++ C
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
+ +AV L+ M ++P +++ +I G + +E++ ++ M ++GC+P+ TY
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 479 LLIEGIGYGGWRAEAMELANAL 500
++ G+ G A+ L N +
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKM 244
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 226/423 (53%), Gaps = 22/423 (5%)
Query: 58 YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAYNALISGF 116
Y + S + P+ + +IK + R ++A+ V + E+ PD + Y L+ G
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 117 CKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTV 176
CK +I+ A +LD ++S G SP V YN++I LC +G + K+ D + C P
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 177 ITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLL 236
+TY LI L+G+ DKA+ LL+ M S C P+ ++Y L+
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERM------------------VSSKCIPNDVTYGTLI 334
Query: 237 RTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
L+ + + +L++ M RG N YS+LIS L ++GK E+A+ + R EKG
Sbjct: 335 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 356
P+ Y L+ C++G+ + A E L+ MI+ GCLP+ Y++++ F K G ++A+++
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 357 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 416
++++ GC N Y+ + L G A+ + S+ML+ GI+PD + Y+S+I LC
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 417 DGMVDEAVGLLVDM---ESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
G +D A+ L +M E + +P V++YNI++ G C + I+ ++++L +M ++GC P+
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Query: 474 ETT 476
T
Sbjct: 575 VIT 577
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 18/392 (4%)
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N +I+ +E + V++ + SP+ +++N++I +LC ++ A +VF +
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
C P TY L+ E + D+A+ LLDEM +S GC P
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM------------------QSEGCSPSP 257
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
+ YN+L+ L G KL+ M +G PN VTY+ LI LC GK + AV +L
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
P+ +Y LI+ K R A+ L M G + Y+ +++ K G
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
A++A+ ++ K+++ GC PN+ Y+ + L G A +++ M++ G P+ TY+S
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
L+ + G+ +EAV + +M+ T Y+++I G C R+ E++ V + M G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
KP+ Y +I+G+ G A++L + ++
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 199/466 (42%), Gaps = 76/466 (16%)
Query: 54 DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNAL 112
D ++ M C PD L+ +E + ++AV +++ ++ G P YN L
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
I G CK + K++D + +G P+ VTYN +I LC +G ++ A + ++++ C
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 173 KPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQ 215
P +TY LI + + + A++LL M G+ K+G +A
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS------- 268
R + +GC+P+++ Y++L+ L GK E ++++ MI+ G PN TYS
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 269 ----------------------------ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
+LI LC G+ ++A+ V G+ PD
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISD---GCLPDIVNYNTILAAFCKNGNADQALEIF 357
+Y +I C G +D A++ M+ PD+V YN +L C + +A+++
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 358 EKLSDVGCPPNVSSYNTMFSAL---WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
+ D GC P+V + NT + L +S DK R+ L+ L
Sbjct: 564 NSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF-----------------LEELVVRL 606
Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
+ V A ++ M P ++ +I+ CK ++IN +I+
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEIL---EKYGEPD 105
G+ E++ M+ G KPD V + +IK + A+++ E+L E +PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 106 VFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
V YN L+ G C I A +L+ + RG PDV+T N + +L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 233/462 (50%), Gaps = 19/462 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS-NKAVRVM-EI 97
F ++K R D++L + A+G P V+ ++ + +++ + A V E+
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 98 LEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
LE P+VF YN LI GFC A I++A + D++ ++G P+VVTYN +I C I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
+ FK+ + +P +I+Y ++I EG+ + +L EM
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
G CK+G QA + G P VI+Y L+ ++ G + + +M RGL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
PN TY+ L+ + G +A VLR + G +P +Y+ LI+ +C G+++ AI
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
L+ M G PD+V+Y+T+L+ FC++ + D+AL + ++ + G P+ +Y+++
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
A + EML G+ PDE TY +LI+ C +G +++A+ L +M P V+
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
+Y+++I G K R E+ +L +F + P++ TY LIE
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 33/472 (6%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
AG D +L + M GC P+VV LI + + RK + +++ + G EP++ +
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
YN +I+G C+ +++ + VL + RG+S D VTYN +I C G A + ++L
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---GMC--------------KKGMVG 211
R P+VITYT LI + G ++AM+ LD+M G+C +KG +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
+A++ +R + G P V++YN L+ GK E+ ++ +M +GL P+VV+YS ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
S CR ++A+ V R EKG+ PD +Y LI +C+ R A + + M+ G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
PD Y ++ A+C G+ ++AL++ ++ + G P+V +Y+ + + L A +
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 392 ISEMLSKGIEPDEITYN---------------SLISCLCRDGMVDEAVGLLVDMESTRFR 436
+ ++ + P ++TY+ SLI C GM+ EA + M +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGG 488
P +YNI+I G C+ I ++ + M + G + T + L++ + G
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 217/415 (52%), Gaps = 20/415 (4%)
Query: 89 NKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ-IELANKVLDRLRSRGFSPDVVTYNI 146
+KA+ ++ + + +G P V +YNA++ ++ + I A V + SP+V TYNI
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCK 206
+I C G I+ A +FD++ C P V+TY LI G CK
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID------------------GYCK 252
Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
+ F+ +RS+ +G +P++ISYN+++ L G+ +E ++TEM RG + VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
Y+ LI C++G A+ + GLTP +Y LI + CK G ++ A+EFLD M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
G P+ Y T++ F + G ++A + +++D G P+V +YN + + +G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
A+ ++ +M KG+ PD ++Y++++S CR VDEA+ + +M +P I+Y+ +I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
GFC+ RR E+ ++ M G P+E TY LI G +A++L N +V
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 209/389 (53%), Gaps = 19/389 (4%)
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN-IMIGSLCSRGMIESAFKVFDQL 167
++ ++ + + + I+ A ++ ++ GF P V++YN ++ ++ S+ I A VF ++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
L P V TY ILI+ G D A+ L D+M E++GC P
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM------------------ETKGCLP 238
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+V++YN L+ + K ++G KL+ M +GLEPN+++Y+++I+ LCR+G+ ++ VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
+G + D +Y+ LI YCK+G A+ M+ G P ++ Y +++ + CK
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
GN ++A+E +++ G PN +Y T+ G A ++ EM G P +TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N+LI+ C G +++A+ +L DM+ P V+SY+ ++ GFC++ ++E++ V M E
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
KG KP+ TY LI+G EA +L
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 204/457 (44%), Gaps = 34/457 (7%)
Query: 33 FDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 92
+ + E + LIK + G F ++L M+ +G P V+ T LI + N+A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 93 RVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSL 151
++ + G P+ Y L+ GF + + A +VL + GFSP VVTYN +I
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVG 211
C G +E A V + + P V++Y+ ++ G C+ V
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS------------------GFCRSYDVD 467
Query: 212 QAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILI 271
+A + R + +G +PD I+Y+ L++ + +E L EM+ GL P+ TY+ LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
++ C +G E A+ + EKG+ PD +Y LI+ K R A L + + +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 332 PDIVNYNT---------------ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
P V Y+T ++ FC G +A ++FE + P+ ++YN M
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
+GD +A + EM+ G +T +L+ L ++G V+E ++V + +
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
+++ + ++ ++VLA M + G PN
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 328 DGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR 387
D C ++ ++ ++ + D+AL I G P V SYN + A S I
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 388 -ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
A + EML + P+ TYN LI C G +D A+ L ME+ P V++YN +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE 492
G+CK R+I++ ++L +M KG +PN +Y ++I G+ G E
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 237/464 (51%), Gaps = 21/464 (4%)
Query: 39 QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
+F KL+ + KF+ + E M G D+ + I F + + + A+ V+ +
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 99 EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
K G EPD+ ++L++G+C + +I A ++D++ G+ PD T+ +I L
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
A + DQ+++ C+P ++TY ++ G D A+ LL++M
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
+CK V A +E++G +P+V++YN L+ L N G+W + +L++ M+ + +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 320
PNVVT++ LI + ++GK +A + ++ + PD +Y+ LI+ +C RLD A +
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 321 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 380
+M+S CLP+I YNT++ FCK + +E+F ++S G N +Y T+ +
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 381 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
+GD A + +M+S + D +TY+ L+ LC G +D A+ + ++ + +
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
YN +I G CK ++ E+ ++ ++ KP+ TY +I G+
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 18/385 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P + +N L+S K N+ EL + +++++ G S D+ TY+I I C R + A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P ++T + L+ G C + A V +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLN------------------GYCHSKRISDAVALVDQMVEM 182
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PD ++ L+ L K E L+ +M+ RG +P++VTY +++ LC+ G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
+++L + + + ++ +I + CK +++A++ M + G P++V YN+++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
C G A + + + PNV ++N + A + G + A + EM+ + I+PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
ITYN LI+ C +DEA + M S P + +YN +I GFCK +R+ + +E+
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGG 488
M ++G N TY +I+G G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 192/414 (46%), Gaps = 21/414 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI F K E++ ++ MV GC+PD+V ++ + + A+ ++ +E
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
+ +V +N +I CK +E+A + + ++G P+VVTYN +I LC+ G
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ +L P V+T+ LI A EG+ +A KL +EM
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
G C + +A Q + + S+ C P++ +YN L+ + E+G +L EM RGL
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
N VTY+ +I + G + A V + + D +Y L+ C G+LD A+
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
Y+ +I YNT++ CK G +A ++F LS P+V +YNTM S L S
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCS 547
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
A + +M G P+ TYN+LI RD + L+ +M S+ F
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 147/271 (54%), Gaps = 2/271 (0%)
Query: 232 YNMLLRTLL-NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
Y +LR L ++ K ++ L +M+ P++V ++ L+S++ + K E + +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ G++ D Y+Y I+ +C+ +L LA+ L M+ G PDIV +++L +C +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
A+ + +++ ++G P+ ++ T+ L+ A+ ++ +M+ +G +PD +TY ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
++ LC+ G +D A+ LL ME+ R + V+ +N II CK R + ++++ M KG
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 471 KPNETTYVLLIEGI-GYGGWRAEAMELANAL 500
+PN TY LI + YG W + L+N L
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 23/286 (8%)
Query: 32 SFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA 91
S D + LI + DE+ + MV+ C P++ LI F + ++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 92 VRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
V + + + G + Y +I GF +A + A V ++ S D++TY+I++
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
LCS G +++A +F L + + + Y +I+ GMCK G V
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE------------------GMCKAGKV 519
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
G+A+ SL +PDV++YN ++ L + +E + L +M G PN TY+ L
Sbjct: 520 GEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLD 316
I + RD + ++++ + G DA S L++ DGRLD
Sbjct: 577 IRANLRDCDRAASAELIKEMRSSGFVGDA-STISLVTNMLHDGRLD 621
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 354 LEIFEKLSDVGCPPNVSSY-NTMFSALW------SSGD-------------KIR-ALGMI 392
L + L +G PP V S+ N S W +SGD K+ A+ +
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLF 71
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
+M+ P + +N L+S + + + + L M++ + +Y+I I FC+
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF 511
+++ ++ VLA M + G +P+ T L+ G + ++A+ L + +V M DTF
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM-GYKPDTF 189
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 244/506 (48%), Gaps = 58/506 (11%)
Query: 31 LSFDVKE-TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
LSF V+ + ++++ + +F+E+L MV + P ++ TKL+ + +K +
Sbjct: 30 LSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD 89
Query: 90 KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
+ + + L+ G D++ N L++ FC+++Q LA+ L ++ GF PD+VT+ +I
Sbjct: 90 VVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149
Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
C +E A + +Q++ KP V+ YT +I + +CK G
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS------------------LCKNG 191
Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
V A +E+ G +PDV+ Y L+ L N G+W + + L+ M R ++P+V+T++
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
LI + ++GK DA ++ + P+ ++Y LI+ +C +G +D A + M +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
GC PD+V Y +++ FCK D A++IF ++S G N +Y T+ G A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF---RPTVISYNII 445
+ S M+S+G+ P+ TYN L+ CLC +G V +A+ + DM+ P + +YN++
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 446 I-----------------------------------LGFCKTRRINESIEVLAAMFEKGC 470
+ G CK ++ ++ + ++ KG
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
KPN TY +I G+ G + EA L
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVL 517
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 191/391 (48%), Gaps = 21/391 (5%)
Query: 31 LSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNK 90
L F+ F LI + +E++ + MV G KPDVVM T +I + N
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 91 AVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIG 149
A+ + + +E YG PDV Y +L++G C + + A+ +L + R PDV+T+N +I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 150 SLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------- 202
+ G A +++++++R + P + TYT LI +EG D+A ++ M
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 203 ----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLM 252
G CK V A + + +G + I+Y L++ +GK +++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 253 TEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK---GLTPDAYSYDPLISAY 309
+ M+SRG+ PN+ TY++L+ LC +GK + A+ + +++ G+ P+ ++Y+ L+
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
C +G+L+ A+ + M I+ Y I+ CK G A+ +F L G PNV
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
+Y TM S L+ G K A + +M G+
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 165/343 (48%), Gaps = 18/343 (5%)
Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
A +F ++ P++I +T L+ + D + L D
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH------------------ 97
Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
L+ G D+ + N+L+ + + +M+ G EP++VT++ LI+ C +
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
E+A+ ++ E G+ PD Y +I + CK+G ++ A+ D M + G PD+V Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
++ C +G A + ++ P+V ++N + A G + A + +EM+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
I P+ TY SLI+ C +G VDEA + ME+ P V++Y +I GFCK +++++++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
++ M +KG N TY LI+G G G A E+ + +VS
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 144/305 (47%), Gaps = 36/305 (11%)
Query: 207 KGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVT 266
KG G+A F R L+ +Y +LR L+ ++ E L T M+ P+++
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 267 YSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI 326
++ L++ + + K + +++ + G++ D Y+ + L++ +C+ + LA FL M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 327 SDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKI 386
G PDIV + +++ FC ++
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEE---------------------------------- 160
Query: 387 RALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIII 446
A+ M+++M+ GI+PD + Y ++I LC++G V+ A+ L ME+ RP V+ Y ++
Sbjct: 161 -AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 447 LGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAI 506
G C + R ++ +L M ++ KP+ T+ LI+ G +A EL N ++ M +I
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM-SI 278
Query: 507 SRDTF 511
+ + F
Sbjct: 279 APNIF 283
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI + GKF ++ M+ P++ T LI F E ++A ++ ++E
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
G PDV AY +LI+GFCK +++ A K+ + +G + + +TY +I G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A +VF ++ P + TY +L+ G+ KA+ + ++M
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
G+C G + +A + R +I+Y ++++ + GK + L + S+
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLT 296
G++PNVVTY+ +IS L R+G +A + R KE G++
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 231/446 (51%), Gaps = 19/446 (4%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
+F+++ MV + P +V T+L+ R+ + + +E YG D++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
LI FC+ +++ A VL ++ G+ P +VT+ ++ C I AF + +++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
+P V+ Y LI G+CK G + A + + +E +G DV+
Sbjct: 171 GYEPNVVVYNTLID------------------GLCKNGELNIALELLNEMEKKGLGADVV 212
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
+YN LL L G+W + +++ +M+ R + P+VVT++ LI + G ++A ++ +
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ + P+ +Y+ +I+ C GRL A + D M S GC P++V YNT+++ FCK
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
D+ +++F+++S G ++ +YNT+ G AL + M+S+ + PD IT+ L
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
+ LC +G ++ A+ DM + +++YNI+I G CK ++ ++ E+ + +G
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMEL 496
KP+ TY ++I G+ G R EA EL
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADEL 478
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 194/393 (49%), Gaps = 19/393 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI R + +L + M+ G +P +V L+ F + A ++ ++
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G EP+V YN LI G CK ++ +A ++L+ + +G DVVTYN ++ LC G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
A ++ +++ + P V+T+T LI + +G D+A +L EM ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--------------IQ 274
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
S P+ ++YN ++ L G+ + +K M S+G PNVVTY+ LIS C+
Sbjct: 275 S----SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
++ + + + +G D ++Y+ LI YC+ G+L +A++ +M+S PDI+ +
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
+L C NG + AL F+ + + + +YN M L + +A + + +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 431
G++PD TY +I LC++G EA L+ M+
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 18/345 (5%)
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
E AF +F +++ P+++ +T L+ AT + + + F
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI------------------YFS 94
Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
+ +E G D+ S+ +L+ + ++ +M+ G EP++VT+ L+ C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
+ DA ++ + G P+ Y+ LI CK+G L++A+E L+ M G D+V Y
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
NT+L C +G A + + P+V ++ + G+ A + EM+
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
++P+ +TYNS+I+ LC G + +A M S P V++YN +I GFCK R ++E
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+++ M +G + TY LI G G A+++ +VS
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
Query: 232 YNMLLRT-LLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
Y LRT L+ ++E+ L EM+ P++V ++ L+++ + E + +
Sbjct: 38 YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ G++ D YS+ LI +C+ RL A+ L M+ G P IV + ++L FC
Sbjct: 98 ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
A + + G PNV YNT+ L +G+ AL +++EM KG+ D +TYN+L
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
++ LC G +A +L DM P V+++ +I F K ++E+ E+ M +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
PN TY +I G+ G +A + + + S
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 230/449 (51%), Gaps = 20/449 (4%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+ F KL++ + G E ++ ++ G P++ I+ Q + + AVR++
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 98 LEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
L + G +PDV YN LI G CK ++ + A L ++ + G PD TYN +I C GM
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
++ A ++ + + P TY LI EG+T++A+ L +E
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA-------------- 382
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
+G +P+VI YN L++ L N G E +L EM +GL P V T++IL++ LC+
Sbjct: 383 ----LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
G DA +++ KG PD ++++ LI Y +++ A+E LD M+ +G PD+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
YN++L CK + +E ++ + + GC PN+ ++N + +L ALG++ EM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM-ESTRFRPTVISYNIIILGFCKTRRI 455
+K + PD +T+ +LI C++G +D A L M E+ + + +YNIII F + +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGI 484
+ ++ M ++ P+ TY L+++G
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 230/441 (52%), Gaps = 18/441 (4%)
Query: 79 IKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF 137
+K + ++ K +AV V E ++ Y EP VF+YNA++S + + A+KV R+R RG
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 138 SPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMK 197
+PDV ++ I + S C +A ++ + + C+ V+ Y ++ E + +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 198 LLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
L +M +CKKG V + + + + RG P++ +YN+ ++ L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
G+ + +++ +I +G +P+V+TY+ LI LC++ K ++A L +GL PD+Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
+Y+ LI+ YCK G + LA + + +G +PD Y +++ C G ++AL +F +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
G PNV YNT+ L + G + A + +EM KG+ P+ T+N L++ LC+ G V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLL 480
+A GL+ M S + P + ++NI+I G+ ++ ++E+L M + G P+ TY L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 481 IEGIGYGGWRAEAMELANALV 501
+ G+ + ME +V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMV 523
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 221/441 (50%), Gaps = 19/441 (4%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKA-VRVMEILEKYGEPDVFAY 109
G+ D ++ + ++ G KPDV+ LI + K +A V + +++ + EPD + Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N LI+G+CK ++LA +++ GF PD TY +I LC G A +F++ L
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
KP VI Y LI+ +G +A +L +EM G+CK G V
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
A V+ + S+G PD+ ++N+L+ K E +++ M+ G++P+V TY+ L++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
LC+ K ED ++ + EKG P+ ++++ L+ + C+ +LD A+ L+ M + P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDV-GCPPNVSSYNTMFSALWSSGDKIRALGM 391
D V + T++ FCKNG+ D A +F K+ + + +YN + A + A +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
EM+ + + PD TY ++ C+ G V+ L++M F P++ + +I C
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 452 TRRINESIEVLAAMFEKGCKP 472
R+ E+ ++ M +KG P
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVP 705
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 219/436 (50%), Gaps = 19/436 (4%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
+G FD++ M G PDV T +K F + + + A+R++ + G E +V A
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
Y ++ GF + N ++ ++ + G S + T+N ++ LC +G ++ K+ D+++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+ P + TY + IQ G+C++G + A + V L +G +PD
Sbjct: 244 KRGVLPNLFTYNLFIQ------------------GLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
VI+YN L+ L K++E E + +M++ GLEP+ TY+ LI+ C+ G + A ++
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
A G PD ++Y LI C +G + A+ + + G P+++ YNT++ G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
+A ++ ++S+ G P V ++N + + L G A G++ M+SKG PD T+N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
LI ++ A+ +L M P V +YN ++ G CKT + + +E M EK
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 469 GCKPNETTYVLLIEGI 484
GC PN T+ +L+E +
Sbjct: 526 GCAPNLFTFNILLESL 541
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 19/313 (6%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
LIK G E+ M G P+V L+ + + A +++++ G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
PD+F +N LI G+ ++E A ++LD + G PDV TYN ++ LC E
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
+ + ++ C P + T+ IL+++ + D+A+ LL+EM G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 205 CKKGMVGQAFQFVRSLE-SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
CK G + A+ R +E + +YN+++ EKL EM+ R L P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
TY +++ C+ G L E G P + +I+ C + R+ A +
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 324 YMISDGCLPDIVN 336
M+ G +P+ VN
Sbjct: 697 RMVQKGLVPEAVN 709
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
EP +YN+++S L G D+A + + M P V S+ I + FCKT R + ++
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL-ANALVSMHAISRDTFKRLNRTF 518
+L M +GC+ N Y ++ G ++AE EL L S ++ TF +L R
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 232/461 (50%), Gaps = 19/461 (4%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
K D+++ MV + P +V +KL+ + K + + + E ++ G +++ Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
I+ FC+ +Q+ LA +L ++ G+ P +VT N ++ C I A + DQ++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQA 213
+P +T+T L+ + +A+ L++ M G+CK+G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 214 FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISS 273
+ +E + DV+ YN ++ L ++ L +M ++G++P+V TY+ LIS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 274 LCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMI-SDGCLP 332
LC G+ DA +L EK + PD ++ LI A+ K+G+L A + D M+ S C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
D+V YNT++ FCK ++ +E+F ++S G N +Y T+ + + D A +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
+M+S G+ PD +TYN L+ LC +G V+ A+ + M+ + +++Y +I CK
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
++ + ++ ++ KG KPN TY ++ G G + EA
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 237/483 (49%), Gaps = 19/483 (3%)
Query: 39 QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL 98
+F KL+ + KFD + E M G ++ + I F + + + A+ ++ +
Sbjct: 77 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 99 EKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMI 157
K G P + N+L++GFC N+I A ++D++ G+ PD VT+ ++ L
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 158 ESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------------- 202
A + ++++ C+P ++TY +I G+ D A+ LL++M
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 203 --GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL 260
G+CK + AF +E++G +PDV +YN L+ L N G+W + +L+++M+ + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 261 EPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
P++V ++ LI + ++GK +A + K K PD +Y+ LI +CK R++ +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 320 EFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSAL 379
E M G + + V Y T++ F + + D A +F+++ G P++ +YN + L
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 380 WSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTV 439
++G+ AL + M + ++ D +TY ++I LC+ G V++ L + +P V
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 440 ISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
++Y ++ GFC+ E+ + M E G PN TY LI G A + EL
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556
Query: 500 LVS 502
+ S
Sbjct: 557 MRS 559
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 217/434 (50%), Gaps = 20/434 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVF 107
+ E++ ++ MV G +PD V T L+ FQ K+++AV ++E ++ K +PD+
Sbjct: 157 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y A+I+G CK + +LA +L+++ DVV YN +I LC ++ AF +F+++
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
KP V TY LI G+ A +LL +M LE + P
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-----------------LE-KNINP 318
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMI-SRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
D++ +N L+ + GK E EKL EM+ S+ P+VV Y+ LI C+ + E+ ++V
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
R ++GL + +Y LI + + D A M+SDG PDI+ YN +L C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
NGN + AL +FE + ++ +Y TM AL +G + + KG++P+ +T
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
Y +++S CR G+ +EA L V+M+ P +YN +I + S E++ M
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 467 EKGCKPNETTYVLL 480
G + +T+ L+
Sbjct: 559 SCGFAGDASTFGLV 572
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 18/430 (4%)
Query: 17 RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
R+S + + + F L+ F+ K E++ +E MV GC+PD+V
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 77 KLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
+I + + + A+ ++ +EK E DV YN +I G CK ++ A + +++ ++
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G PDV TYN +I LC+ G A ++ +L N P ++ + LI A + EG+ +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
KL DEM ++S+ C PDV++YN L++ + EEG ++ EM
Sbjct: 340 EKLYDEM-----------------VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 256 ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
RGL N VTY+ LI + ++A V + G+ PD +Y+ L+ C +G +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 375
+ A+ +YM DIV Y T++ A CK G + ++F LS G PNV +Y TM
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 376 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
S G K A + EM G P+ TYN+LI RDG + L+ +M S F
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 436 RPTVISYNII 445
++ ++
Sbjct: 563 AGDASTFGLV 572
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 158/312 (50%), Gaps = 9/312 (2%)
Query: 227 PDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV 286
P ++ ++ LL + M K++ L +M + G+ N+ TYSI I+ CR + A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 287 LRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCK 346
L + G P + + L++ +C R+ A+ +D M+ G PD V + T++ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 347 NGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT 406
+ A +A+ + E++ GC P++ +Y + + L G+ AL ++++M IE D +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 407 YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF 466
YN++I LC+ +D+A L ME+ +P V +YN +I C R +++ +L+ M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 467 EKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMH----AISRDT----FKRLNRT 517
EK P+ + LI+ G EA +L + +V S H ++ +T F + R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 518 FPLLDVYKEISH 529
++V++E+S
Sbjct: 373 EEGMEVFREMSQ 384
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 141/267 (52%), Gaps = 1/267 (0%)
Query: 235 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
L R +L K ++ L +M+ P++V +S L+S++ + K + + + + G
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
++ + Y+Y I+ +C+ +L LA+ L M+ G P IV N++L FC +A+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCL 414
+ +++ ++G P+ ++ T+ L+ A+ ++ M+ KG +PD +TY ++I+ L
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 415 CRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNE 474
C+ G D A+ LL ME + V+ YN II G CK + ++++ ++ M KG KP+
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 475 TTYVLLIEGI-GYGGWRAEAMELANAL 500
TY LI + YG W + L++ L
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDML 312
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%)
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
D A+ +F + P++ ++ + SA+ + + +M + GI + TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
I+ CR + A+ +L M + P++++ N ++ GFC RI+E++ ++ M E G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALV 501
+P+ T+ L+ G+ +EA+ L +V
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMV 207
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%)
Query: 388 ALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIIL 447
A+G+ +M+ P + ++ L+S + + D + L M++ + +Y+I I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 448 GFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
FC+ +++ ++ +L M + G P+ T L+ G +G +EA+ L + +V M
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 222/449 (49%), Gaps = 9/449 (2%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
AGK++++ I M+ G PD +K++ K A + E +++ G DV+
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
Y ++ FCKA IE A K + +R G +P+VVTY +I + + A ++F+ +L
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+ C P ++TY+ LI GQ +KA ++ + M C V + + + +P+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPN 638
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
V++Y LL + EE KL+ M G EPN + Y LI LC+ GK ++A +V
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
E G Y+Y LI Y K R DLA + L M+ + C P++V Y ++ CK G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
D+A ++ + + + GC PNV +Y M G L ++ M SKG+ P+ +TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
LI C++G +D A LL +M+ T + Y +I GF + ES+ +L + +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 876
Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELA 497
P + Y LLI+ + +A+ +E+A
Sbjct: 877 DTAPFLSVYRLLIDNL----IKAQRLEMA 901
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 45/482 (9%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
+ KLI A F+E++ F+ M A C P+VV + L+ +++ + RV+ ++
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 100 K---YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR-- 154
Y P +F N+L+ +C + A K+L ++ G P V YNI+IGS+C
Sbjct: 365 MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 155 ----GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
+++ A K + ++L I + + +C G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC------------------LCSAGKY 464
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+AF +R + +G PD +Y+ +L L N K E L EM GL +V TY+I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
+ S C+ G E A +E G TP+ +Y LI AY K ++ A E + M+S+GC
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKL----------------SDVGCPPNVSSYNT 374
LP+IV Y+ ++ CK G ++A +IFE++ D PNV +Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 375 MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 434
+ S A ++ M +G EP++I Y++LI LC+ G +DEA + +M
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 435 FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
F T+ +Y+ +I + K +R + + +VL+ M E C PN Y +I+G+ G EA
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 495 EL 496
+L
Sbjct: 765 KL 766
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 206/434 (47%), Gaps = 39/434 (8%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--- 96
+ LI +A K + E+M++ GC P++V + LI + + KA ++ E
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 97 ----------ILEKYGE----PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVV 142
++Y + P+V Y AL+ GFCK++++E A K+LD + G P+ +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 143 TYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM 202
Y+ +I LC G ++ A +V ++ T+ TY+ LI + D A K+L +M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 203 -----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKW 245
G+CK G +A++ ++ +E +GCQP+V++Y ++ +GK
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 246 EEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPL 305
E +L+ M S+G+ PN VTY +LI C++G + A ++L K+ Y +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 306 ISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGC 365
I + K+ L + LD + D P + Y ++ K + AL + E+++
Sbjct: 856 IEGFNKEFIESLGL--LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 366 P--PNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 423
S+YN++ +L + A + SEM KG+ P+ ++ SLI L R+ + EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 424 VGLLVDMESTRFRP 437
+ LL+D S P
Sbjct: 974 L-LLLDFISHMVCP 986
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 171/433 (39%), Gaps = 66/433 (15%)
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
YNAL+ + + ++ + L ++R N+++ C G A + +L
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+P+ TY LIQA + + D A + EM + M G
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG----------------- 270
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
+ +L +GKW E +T + + P+ V Y+ LIS LC E+A+D L
Sbjct: 271 -FTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
+ P+ +Y L+ +L L+ M+ +GC P +N+++ A+C +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIR------ALGMISEMLSKGIEP 402
+ A ++ +K+ G P YN + ++ D + A SEML+ G+
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP------------------------- 437
++I +S CLC G ++A ++ +M F P
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 438 ----------TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
V +Y I++ FCK I ++ + M E GC PN TY LI +
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI----HA 562
Query: 488 GWRAEAMELANAL 500
+A+ + AN L
Sbjct: 563 YLKAKKVSYANEL 575
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 3/243 (1%)
Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
G + Y+ L+ + RD + + L+ ++ + L+ +C++G +A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
+E L + P YN ++ AF K D A I ++S + + +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
L G AL ++ ++ PD + Y LIS LC + +EA+ L M +T P
Sbjct: 280 LCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
V++Y+ ++ G +++ VL M +GC P+ + L+ G + A +L
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 499 ALV 501
+V
Sbjct: 397 KMV 399
>sp|Q9FRS4|PPR22_ARATH Pentatricopeptide repeat-containing protein At1g08610
OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1
Length = 559
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 218/452 (48%), Gaps = 52/452 (11%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
L++ R + D+++ + MV +G PD +
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTI----------------------------- 175
Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
YN +I CK I A +L+ + G PDV+TYN +I + G E A +
Sbjct: 176 -----TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES 222
+ L++ C P +ITYT+L++ + +A+++L++M +
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV------------------ 272
Query: 223 RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
GC PD+++YN L+ G EE ++ ++S GLE N VTY+ L+ SLC ++
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332
Query: 283 AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILA 342
++L + P +Y+ LI+ CK L AI+F M+ CLPDIV YNT+L
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392
Query: 343 AFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEP 402
A K G D A+E+ L + CPP + +YN++ L G +AL + +ML GI P
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452
Query: 403 DEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVL 462
D+IT SLI CR +V+EA +L + + +Y ++I G CK + I +IEV+
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512
Query: 463 AAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 494
M GCKP+ET Y +++G+ G +EA+
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 190/379 (50%), Gaps = 21/379 (5%)
Query: 140 DVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLL 199
D T N ++ +LCS G + A K+ + + R N P + + L++ Q DKAM +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 200 DEMGM-----------------CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
M M CKKG + A + + G PDVI+YN ++R + +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
G E+ + + + G P ++TY++L+ +CR + A++VL +G PD +Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
+ L++ C+ G L+ + +++S G + V YNT+L + C + D+ EI +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
P V +YN + + L + RA+ +ML + PD +TYN+++ + ++GMVD+
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
A+ LL +++T P +I+YN +I G K + +++E+ M + G P++ T LI
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI- 461
Query: 483 GIGYGGWRAEAMELANALV 501
YG RA +E A ++
Sbjct: 462 ---YGFCRANLVEEAGQVL 477
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 165/333 (49%), Gaps = 18/333 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
+ +I+ F G ++++ F + + NGC P ++ T L++ + S +A+ V+E +
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
G PD+ YN+L++ C+ +E V+ + S G + VTYN ++ SLCS +
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD 331
Query: 159 SAFKVFDQLLRDNCKPTVITYTILI----QATMLEGQTDKAMKLLDEM------------ 202
++ + + + + PTVITY ILI +A +L D ++L++
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
M K+GMV A + + L++ C P +I+YN ++ L G ++ +L +M+ G+
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
P+ +T LI CR E+A VL+ +G +Y +I CK +++AIE
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
++ M++ GC PD Y I+ + G +A+
Sbjct: 512 VEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 146/321 (45%), Gaps = 35/321 (10%)
Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
QF S + + D + N +L L + GK + KL+ M P+ + S L+ L
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
R + + A+ +LR G PD +Y+ +I CK G + A+ L+ M G PD+
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV 209
Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
+ YNT++ GNA+QA+ ++ GCPP + +Y + + RA+ ++ +
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVD------------------------- 429
M +G PD +TYNSL++ CR G ++E ++
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 430 ----------MESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
M T + PTVI+YNI+I G CK R ++ +I+ M E+ C P+ TY
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 480 LIEGIGYGGWRAEAMELANAL 500
++ + G +A+EL L
Sbjct: 390 VLGAMSKEGMVDDAIELLGLL 410
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 236/462 (51%), Gaps = 19/462 (4%)
Query: 36 KETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM 95
+ + ++ KFD++ M+ + P +V T+++ + K + + +
Sbjct: 43 HHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY 102
Query: 96 EILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 154
+E G D++++ LI FC+ +++ LA +L ++ GF P +VT ++ C
Sbjct: 103 HKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG 162
Query: 155 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAF 214
+ A + D + P V+ Y +I G+CK + A
Sbjct: 163 NRFQEAVSLVDSMDGFGFVPNVVIYNTVIN------------------GLCKNRDLNNAL 204
Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
+ +E +G + D ++YN L+ L N G+W + +L+ +M+ R ++PNV+ ++ LI +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
++G +A ++ + + + P+ ++Y+ LI+ +C G L A D M+S GC PD+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
V YNT++ FCK+ + +++F +++ G + +YNT+ +G A + +
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
M+ G+ PD +TYN L+ CLC +G +++A+ ++ D++ + +I+YNIII G C+T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+ E+ + ++ KG KP+ Y+ +I G+ G + EA +L
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 208/439 (47%), Gaps = 19/439 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +++ + KFD +Y M G D+ T LI F + + + A+ ++ +
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G P + +L++GFC+ N+ + A ++D + GF P+VV YN +I LC +
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
+A +VF + + + +TY LI G+ G A + +R
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLIS------------------GLSNSGRWTDAARLLR 243
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+ R P+VI + L+ T + G E L EMI R + PNV TY+ LI+ C G
Sbjct: 244 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
DA + KG PD +Y+ LI+ +CK R++ ++ M G + D YN
Sbjct: 304 CLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
T++ +C+ G + A ++F ++ D G P++ +YN + L ++G +AL M+ ++
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
++ D ITYN +I LCR + EA L + +P I+Y +I G C+ E+
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 459 IEVLAAMFEKGCKPNETTY 477
++ M E G P+E Y
Sbjct: 484 DKLCRRMKEDGFMPSERIY 502
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 18/364 (4%)
Query: 63 MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQ 121
M+ G +P +V L+ F Q + +AV +++ ++ +G P+V YN +I+G CK
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
+ A +V + +G D VTYN +I L + G A ++ +++ P VI +T
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
LI + EG +A L EM G C G +G A + S+G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
C PDV++YN L+ + E+G KL EM +GL + TY+ LI C+ GK A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
V + G++PD +Y+ L+ C +G+++ A+ ++ + DI+ YN I+
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
C+ +A +F L+ G P+ +Y TM S L G + A + M G P E
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 405 ITYN 408
Y+
Sbjct: 500 RIYD 503
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 157/345 (45%), Gaps = 18/345 (5%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
+ AF +F ++L+ P+++ +T ++ + D + L +M
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-------------- 105
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
E+ G D+ S+ +L+ + L+ +M+ G P++VT L++ C+
Sbjct: 106 ----ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ 161
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ ++AV ++ + G P+ Y+ +I+ CK+ L+ A+E M G D V
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
YNT+++ +G A + + PNV + + G+ + A + EM+
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
+ + P+ TYNSLI+ C G + +A + M S P V++YN +I GFCK++R+
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
+ +++ M +G + TY LI G G A ++ N +V
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%)
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
Y LR L+ K+++ L EM+ P++V ++ +++ + + K + + +
Sbjct: 46 HYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM 105
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ G++ D YS+ LI +C+ RL LA+ L M+ G P IV ++L FC+
Sbjct: 106 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRF 165
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
+A+ + + + G PNV YNT+ + L + D AL + M KGI D +TYN+L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
IS L G +A LL DM + P VI + +I F K + E+ + M +
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
PN TY LI G G +A + + +VS
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
G ++ Y + MV+ GC PDVV LI F + ++ +++ E+ + D F Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N LI G+C+A ++ +A KV +R+ G SPD+VTYNI++ LC+ G IE A + + L +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
+ITY I+IQ + +A L + G+C+KG+ +
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 213 AFQFVRSLESRGCQPDVISYNMLLR 237
A + R ++ G P Y+ LR
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETLR 507
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 226/471 (47%), Gaps = 18/471 (3%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
L+K RA + ++ + ++ M G P+V++ LI F + NKA+ + +++ G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
YN LI G+CK Q + A ++L + S GF+ + ++ +I LCS M +SA
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
+ ++L N P T LI G+ KA++L + G+
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
C+ G + +AF+ + + RGC D +SYN L+ K +E + EM+ RGL+P+
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
TYSILI L K E+A+ K G+ PD Y+Y +I CK R + EF D
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
M+S P+ V YN ++ A+C++G ALE+ E + G PN ++Y ++ +
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
A + EM +G+EP+ Y +LI + G + + LL +M S P I+Y +
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 495
+I G+ + + E+ +L M EKG P+ TY I G G EA +
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 217/468 (46%), Gaps = 18/468 (3%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
G++DE+ F E MV G +P ++ + L+K + ++ A V++ + K G P+V Y
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N LI F +A + A ++ D + S+G S TYN +I C G ++A ++ ++L
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
++T +I D A++ + EM G+CK G +
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
A + ++G D + N LL L GK +E ++ E++ RG + V+Y+ LIS
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
C K ++A L ++GL PD Y+Y LI +++ AI+F D +G LP
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
D+ Y+ ++ CK ++ E F+++ PN YN + A SG AL +
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
+M KGI P+ TY SLI + V+EA L +M P V Y +I G+ K
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
++ + +L M K PN+ TY ++I G G EA L N +
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 205/440 (46%), Gaps = 18/440 (4%)
Query: 63 MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQI 122
+ G P C L+ + + K +++ K PDV+ + I+ FCK ++
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 289
Query: 123 ELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTIL 182
E A K+ ++ G +P+VVT+N +I L G + AF ++++ +PT+ITY+IL
Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349
Query: 183 IQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNM 242
++ G+ + +G A+ ++ + +G P+VI YN L+ + +
Sbjct: 350 VK------------------GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Query: 243 GKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSY 302
G + ++ M+S+GL TY+ LI C++G+ ++A +L+ G + S+
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 303 DPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
+I C D A+ F+ M+ P T+++ CK+G +ALE++ + +
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 511
Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
G + + N + L +G A + E+L +G D ++YN+LIS C +DE
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571
Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
A L +M +P +Y+I+I G ++ E+I+ G P+ TY ++I+
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 483 GIGYGGWRAEAMELANALVS 502
G E E + ++S
Sbjct: 632 GCCKAERTEEGQEFFDEMMS 651
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 57/411 (13%)
Query: 112 LISGFC---KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
LI +C K + LA V L ++G P T NI++ SL + + FD +
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 266
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+ P V +T I A CK G V +A + +E G P+
Sbjct: 267 K-GVSPDVYLFTTAINA------------------FCKGGKVEEAVKLFSKMEEAGVAPN 307
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
V+++N ++ L G+++E +M+ RG+EP ++TYSIL+ L R + DA VL+
Sbjct: 308 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
+KG P+ Y+ LI ++ + G L+ AIE D M+S G YNT++ +CKNG
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 349 NADQALEIFEKLSDVGCPPNVSSY-----------------------------------N 373
AD A + +++ +G N S+
Sbjct: 428 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 487
Query: 374 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 433
T+ S L G +AL + + L+KG D T N+L+ LC G +DEA + ++
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
Query: 434 RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
+SYN +I G C ++++E+ L M ++G KP+ TY +LI G+
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 269 ILISSLCRDGKTED---AVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
+LI C K + A+DV KG+ P + + L+++ + E D +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-V 264
Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
+ G PD+ + T + AFCK G ++A+++F K+ + G PNV ++NT+ L G
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324
Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
A +M+ +G+EP ITY+ L+ L R + +A +L +M F P VI YN +
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
I F + +N++IE+ M KG +TY LI+G G A L ++S+
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
Query: 17 RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
R+S + E R + + LIK + +E+ E M G +P+V T
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 77 KLIKKFFQERKSNKAVRV----MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRL 132
LI + K + V+V E+ K P+ Y +I G+ + + A+++L+ +
Sbjct: 733 ALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 133 RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQ 184
R +G PD +TY I +G + AFK D+ +N + + LIQ
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE---ENYAAIIEGWNKLIQ 838
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 20/455 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
+ GK ++ F+ + G PD+V LI + + +A +M + G P V+
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
YN +I+G CK + E A +V + G SPD TY ++ C +G + KVF +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
+ P ++ ++ ++ G DKA+ + + G C+KGM+
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
A + +GC DV++YN +L L E +KL EM R L P+ T +IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
I C+ G ++A+++ + KEK + D +Y+ L+ + K G +D A E M+S
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
LP ++Y+ ++ A C G+ +A +++++ P V N+M SG+
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR--FRPTVISYNIIILG 448
+ +M+S+G PD I+YN+LI R+ + +A GL+ ME + P V +YN I+ G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
FC+ ++ E+ VL M E+G P+ +TY +I G
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 213/477 (44%), Gaps = 57/477 (11%)
Query: 78 LIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRG 136
LI+ + Q RK +A +L G + A NALI + +ELA V + G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 137 FSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAM 196
+V T NIM+ +LC G +E Q+ P ++TY LI A +G ++A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 197 KLLDEM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTL 239
+L++ M G+CK G +A + + G PD +Y LL
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 240 LNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDA 299
G E EK+ ++M SR + P++V +S ++S R G + A+ + KE GL PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN------------ 347
Y LI YC+ G + +A+ + M+ GC D+V YNTIL CK
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 348 -----------------------GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
GN A+E+F+K+ + +V +YNT+ GD
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
A + ++M+SK I P I+Y+ L++ LC G + EA + +M S +PTV+ N
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
+I G+C++ ++ L M +G P+ +Y LI YG R E M A LV
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI----YGFVREENMSKAFGLV 643
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 195/395 (49%), Gaps = 18/395 (4%)
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
++ LI + +A ++ A++ LRS+GF+ + N +IGSL G +E A+ V+ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
R V T I++ A +CK G + + F+ ++ +G P
Sbjct: 227 SRSGVGINVYTLNIMVNA------------------LCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
D+++YN L+ + G EE +LM M +G P V TY+ +I+ LC+ GK E A +V
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
GL+PD+ +Y L+ CK G + + M S +PD+V ++++++ F ++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
GN D+AL F + + G P+ Y + G A+ + +EML +G D +TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N+++ LC+ M+ EA L +M P + I+I G CK + ++E+ M E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
K + + TY L++G G G A E+ +VS
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 20/387 (5%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
T + L+ + + G E+ M + PD+V + ++ F + +KA+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 98 LEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+++ G PD Y LI G+C+ I +A + + + +G + DVVTYN ++ LC R M
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
+ A K+F+++ P T TILI G AM+L +M
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 203 ---GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 259
G K G + A + + S+ P ISY++L+ L + G E ++ EMIS+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 260 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 319
++P V+ + +I CR G D L +G PD SY+ LI + ++ + A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 320 EFLDYMISD--GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
+ M + G +PD+ YN+IL FC+ +A + K+ + G P+ S+Y M +
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDE 404
S + A + EML +G PD+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 30 LLSFDVKETQFM--KLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
++S ++K T + +IK R+G + F+E M++ G PD + LI F +E
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 88 SNKA---VRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTY 144
+KA V+ ME + PDVF YN+++ GFC+ NQ++ A VL ++ RG +PD TY
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 145 NIMIGSLCSRGMIESAFKVFDQLLRDNCKP 174
MI S+ + AF++ D++L+ P
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 145/368 (39%), Gaps = 75/368 (20%)
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLES--RGCQPD 228
N K T ++ + +I + G+ A L + M ++ V + + V SL+S C +
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCL--LRMIRRSGVSR-LEIVNSLDSTFSNCGSN 164
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
+++L+RT + K E + T + S+G ++ + LI SL R G E A V +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
G+ + Y+ N ++ A CK+G
Sbjct: 225 EISRSGVGINVYTL-----------------------------------NIMVNALCKDG 249
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
++ ++ + G P++ +YNT+ SA S G A +++ M KG P TYN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-- 466
++I+ LC+ G + A + +M + P +Y +++ CK + E+ +V + M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 467 ---------------------------------EKGCKPNETTYVLLIEGIGYGGWRAEA 493
E G P+ Y +LI+G G + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 494 MELANALV 501
M L N ++
Sbjct: 430 MNLRNEML 437
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 229/457 (50%), Gaps = 19/457 (4%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+ + K+++ +F+++L MV + P ++ T+L+ + + + + + E
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 98 LEKYGEPDVFAY-NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
++ G P + N ++ C ++Q A+ L ++ GF PD+VT+ ++ C
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
IE A +FDQ+L KP V+TYT LI+ + A++L ++MG
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG------------- 215
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
+ G +P+V++YN L+ L +G+W + L+ +M+ R +EPNV+T++ LI + +
Sbjct: 216 -----TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
GK +A ++ + + PD ++Y LI+ C G LD A + M +GC P+ V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
Y T++ FCK+ + ++IF ++S G N +Y + G A + ++M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
S+ PD TYN L+ LC +G V++A+ + M +++Y III G CK ++
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
++ ++ ++F KG KPN TY +I G G EA
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 18/346 (5%)
Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRS 219
A +F +++ P++I +T L+ + D + L ++M
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM----------------- 109
Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
+ G P + + N+++ + + + +M+ G EP++VT++ L++ C +
Sbjct: 110 -QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
EDA+ + G P+ +Y LI CK+ L+ A+E + M ++G P++V YN
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 399
++ C+ G A + + PNV ++ + A G + A + + M+
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 400 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 459
+ PD TY SLI+ LC G++DEA + ME P + Y +I GFCK++R+ + +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 460 EVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHA 505
++ M +KG N TY +LI+G G A E+ N + S A
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%)
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
+Y IL N + AL++F ++ P++ + + S + + + +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
GI P T N ++ C+C A L M F P ++++ ++ G+C RI
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
++I + + G KPN TY LI + A+EL N +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 226/434 (52%), Gaps = 29/434 (6%)
Query: 53 FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNAL 112
F S Y+ + A CKP ++ K + R ++ E++ + +P+VF +N +
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLK------ENRSADVEYVYKEMIRRKIQPNVFTFNVV 229
Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC---SRGMIESAFKVFDQLLR 169
I+ CK ++ A V++ ++ G SP+VV+YN +I C G + A V +++
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
++ P + T+ ILI + +MK+ EM + +P+V
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM------------------LDQDVKPNV 331
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
ISYN L+ L N GK E + +M+S G++PN++TY+ LI+ C++ ++A+D+ +
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
K +G P Y+ LI AYCK G++D + M +G +PD+ YN ++A C+NGN
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
+ A ++F++L+ G P++ +++ + G+ +A ++ EM G++P +TYN
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 410 LISCLCRDGMVDEAVGLLVDMEST-RFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
++ C++G + A + ME R R V SYN+++ G+ + ++ ++ +L M EK
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 469 GCKPNETTYVLLIE 482
G PN TY ++ E
Sbjct: 571 GLVPNRITYEIVKE 584
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 192/400 (48%), Gaps = 30/400 (7%)
Query: 58 YFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGF 116
Y + M+ +P+V +I + K NKA VME ++ YG P+V +YN LI G+
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 117 CK---ANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
CK ++ A+ VL + SP++ T+NI+I + + KVF ++L + K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQF 216
P VI+Y LI G+ +A+ + D+M G CK M+ +A
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
S++ +G P YNML+ +GK ++G L EM G+ P+V TY+ LI+ LCR
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+G E A + KGL PD ++ L+ YC+ G A L M G P +
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 337 YNTILAAFCKNGNADQALEIFEKL-SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
YN ++ +CK GN A + ++ + NV+SYN + G A +++EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 435
L KG+ P+ ITY + ++ MVD+ G + D+E F
Sbjct: 568 LEKGLVPNRITYE-----IVKEEMVDQ--GFVPDIEGHLF 600
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 222/491 (45%), Gaps = 50/491 (10%)
Query: 5 VSCINPKSNERVRVSSSAETRPNTHL--LSFDVKETQF-------MKLIKRSFRAGKFDE 55
V+ INP NE R S+E P+ L S+ VK + KL+ A ++ +
Sbjct: 62 VTDINP--NELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSK 119
Query: 56 SLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISG 115
F++ V NG V F V V I+ + L+
Sbjct: 120 IRSFLDGFVRNGSDHQV-------HSIFHAISMCDNVCVNSIIA----------DMLVLA 162
Query: 116 FCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
+ ++ EL + R G+ ++ ++ +L V+ +++R +P
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
V T+ ++I A +CK G + +A + ++ GC P+V+SYN L
Sbjct: 223 VFTFNVVINA------------------LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 236 LRTLLNMG---KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
+ +G K + + ++ EM+ + PN+ T++ILI +D ++ V + +
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
+ + P+ SY+ LI+ C G++ AI D M+S G P+++ YN ++ FCKN +
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
AL++F + G P YN + A G + EM +GI PD TYN LI+
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
LCR+G + EA L D +++ P +++++I++ G+C+ ++ +L M + G KP
Sbjct: 445 GLCRNGNI-EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 473 NETTYVLLIEG 483
TY ++++G
Sbjct: 504 RHLTYNIVMKG 514
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 157/286 (54%), Gaps = 10/286 (3%)
Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
L + C+P L+ LL + + E + EMI R ++PNV T++++I++LC+ GK
Sbjct: 186 LSALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGK 238
Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK---DGRLDLAIEFLDYMISDGCLPDIVN 336
A DV+ K G +P+ SY+ LI YCK +G++ A L M+ + P++
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
+N ++ F K+ N ++++F+++ D PNV SYN++ + L + G A+ M +M+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
S G++P+ ITYN+LI+ C++ M+ EA+ + ++ PT YN++I +CK +I+
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+ + M +G P+ TY LI G+ G A +L + L S
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 30 LLSFDVKET--QFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERK 87
+L DVK + LI GK E++ + MV+ G +P+++ LI F +
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 88 SNKAVRVMEILEKYGE-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 146
+A+ + ++ G P YN LI +CK +I+ + + + G PDV TYN
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 147 MIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---- 202
+I LC G IE+A K+FDQL P ++T+ IL++ +G++ KA LL EM
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 203 -------------GMCKKGMVGQAFQFVRSLES-RGCQPDVISYNMLLRTLLNMGKWEEG 248
G CK+G + A +E R + +V SYN+LL+ GK E+
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 249 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTED 282
L+ EM+ +GL PN +TY I+ + G D
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
N + +L+ + + + E + + + G A S PL+ A K+ R +E++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR-SADVEYV 210
Query: 323 -DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM---FSA 378
MI P++ +N ++ A CK G ++A ++ E + GC PNV SYNT+ +
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPT 438
L +G +A ++ EM+ + P+ T+N LI +D + ++ + +M +P
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 439 VISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELAN 498
VISYN +I G C +I+E+I + M G +PN TY LI G EA+++
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 499 ALVSMHAI 506
++ A+
Sbjct: 391 SVKGQGAV 398
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
LI + GK D+ E M G PDV LI + A ++ + L G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
PD+ ++ L+ G+C+ + A +L + G P +TYNI++ C G +++A
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 163 VFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQ--AFQFVR- 218
+ Q+ ++ + V +Y +L+Q +G+ + A LL+E M +KG+V ++ V+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE--MLEKGLVPNRITYEIVKE 584
Query: 219 SLESRGCQPDV 229
+ +G PD+
Sbjct: 585 EMVDQGFVPDI 595
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 227/457 (49%), Gaps = 19/457 (4%)
Query: 38 TQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEI 97
+ + ++++ R K D+SL MV P + ++L+ + +K + + + E
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 98 LEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
++ G P ++ N L++ FC+ +Q+ LA L ++ G P +VT+ ++ C
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
+ A +FDQ++ KP V+ Y +I G+CK V A
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIID------------------GLCKSKQVDNALDL 208
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
+ +E G PDV++YN L+ L + G+W + ++++ M R + P+V T++ LI + +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+G+ +A + + L PD +Y LI C RLD A E +M+S GC PD+V
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
Y+ ++ +CK+ + +++F ++S G N +Y + +G A + M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
G+ P+ ITYN L+ LC +G +++A+ +L DM+ +++YNIII G CK +
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEA 493
++ ++ ++ +G P+ TY ++ G+ G R EA
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 19/436 (4%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +L+ + K+D +Y E M G ++ C L+ F + + + A+ + +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G EP + + +L++GFC+ +++ A + D++ G+ P+VV YN +I LC ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
+A + +++ +D P V+TY LI G+C G A + V
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLIS------------------GLCSSGRWSDATRMVS 245
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+ R PDV ++N L+ + G+ E E+ EMI R L+P++VTYS+LI LC
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
+ ++A ++ KG PD +Y LI+ YCK +++ ++ M G + + V Y
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
++ +C+ G + A EIF ++ G PN+ +YN + L +G +AL ++++M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
G++ D +TYN +I +C+ G V +A + + P + +Y ++LG K E+
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 459 IEVLAAMFEKGCKPNE 474
+ M E G PNE
Sbjct: 486 DALFRKMKEDGILPNE 501
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 18/345 (5%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
++ + +F +++ P++ ++ L+ A + D + L ++M M
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM------------ 109
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
G ++ + N+LL + + +MI G EP++VT+ L++ CR
Sbjct: 110 ------LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ DA+ + G P+ Y+ +I CK ++D A++ L+ M DG PD+V
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
YN++++ C +G A + ++ P+V ++N + A G A EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
+ ++PD +TY+ LI LC +DEA + M S P V++Y+I+I G+CK++++
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
+++ M ++G N TY +LI+G G A E+ +V
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 5/290 (1%)
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
F F R S G Y +LR + K ++ L M+ P++ +S L+S
Sbjct: 35 GFCFSRRAYSNGSD-----YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLS 89
Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
++ + K + + + + G+ + + + L++ +C+ +L LA+ FL MI G P
Sbjct: 90 AISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEP 149
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
IV + ++L FC+ AL +F+++ +G PNV YNT+ L S AL ++
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
+ M GI PD +TYNSLIS LC G +A ++ M P V ++N +I K
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
R++E+ E M + P+ TY LLI G+ EA E+ +VS
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 17 RVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCT 76
RVS + E S D + LI + DE+ MV+ GC PDVV +
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 77 KLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSR 135
LI + + +K +++ E+ ++ + Y LI G+C+A ++ +A ++ R+
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 136 GFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKA 195
G P+++TYN+++ LC G IE A + + ++ ++TY I+I+
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR----------- 439
Query: 196 MKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 255
GMCK G V A+ SL +G PD+ +Y ++ L G E + L +M
Sbjct: 440 -------GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 256 ISRGLEPN 263
G+ PN
Sbjct: 493 KEDGILPN 500
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 48/102 (47%)
Query: 402 PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEV 461
P ++ L+S + + D + L M+ + + NI++ FC+ +++ ++
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 462 LAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
L M + G +P+ T+ L+ G G +A+ + + +V M
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 221/489 (45%), Gaps = 18/489 (3%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKY 101
LI R GK D +L F+ MV G K V LI + + A M E++ K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
EP V Y +L+ G+C +I A ++ + +G +P + T+ ++ L G+I A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
K+F+++ N KP +TY ++I+ EG KA + L EM G+
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
C G +A FV L C+ + I Y LL GK EE + EM+ RG++ ++
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
V Y +LI + + +L+ ++GL PD Y +I A K G A D
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
MI++GC+P+ V Y ++ CK G ++A + K+ V PN +Y L
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
++ + + KG+ + TYN LI CR G ++EA L+ M P I+Y
Sbjct: 768 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
+I C+ + ++IE+ +M EKG +P+ Y LI G G +A EL N ++
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 505 AISRDTFKR 513
I + R
Sbjct: 888 LIPNNKTSR 896
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 231/504 (45%), Gaps = 19/504 (3%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
+ +F+ L ++ M+ P + L++ + K +A+ +++ + +G P++F
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
YNALI CK + A + DR+ G P+ VTY+I+I C RG +++A ++
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
+ K +V Y LI G A + EM G C KG +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+A + + +G P + ++ LL L G + KL EM ++PN VTY+++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
I C +G A + L+ EKG+ PD YSY PLI C G+ A F+D + C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
+ + Y +L FC+ G ++AL + +++ G ++ Y + D+ G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
++ EM +G++PD++ Y S+I + G EA G+ M + P ++Y +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAE-AMELANALVSMHAISRD 509
K +NE+ + + M PN+ TY ++ + G + A+EL NA++ +
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 510 TFKRLNRTFPLLDVYKEISHLATK 533
T+ L R F +E S L T+
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITR 812
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 218/452 (48%), Gaps = 19/452 (4%)
Query: 52 KFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYN 110
F ++ MV+ G +PDV + T +I+ + + ++A ++ +E G + ++ YN
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN 266
Query: 111 ALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRD 170
LI G CK ++ A + L + PDVVTY ++ LC E ++ D++L
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 171 NCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVI 230
P+ + L++ G+ K+G + +A V+ + G P++
Sbjct: 327 RFSPSEAAVSSLVE------------------GLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
YN L+ +L K+ E E L M GL PN VTYSILI CR GK + A+ L
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
+ GL Y Y+ LI+ +CK G + A F+ MI+ P +V Y +++ +C G
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
++AL ++ +++ G P++ ++ T+ S L+ +G A+ + +EM ++P+ +TYN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
I C +G + +A L +M P SY +I G C T + +E+ + + + C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+ NE Y L+ G G EA+ + +V
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 186/415 (44%), Gaps = 53/415 (12%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 109
GK +++L M G P + T L+ F+ AV++ E+ E +P+ Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N +I G+C+ + A + L + +G PD +Y +I LC G A D L +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------GMCKKGMVGQA---- 213
NC+ I YT L+ EG+ ++A+ + EM G+ G +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 214 -FQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
F ++ + RG +PD + Y ++ G ++E + MI+ G PN VTY+ +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 273 SLCRDGKTEDA------------------------------VDVLRA-----AKEKGLTP 297
LC+ G +A VD+ +A A KGL
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 298 DAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIF 357
+ +Y+ LI +C+ GR++ A E + MI DG PD + Y T++ C+ + +A+E++
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 358 EKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
+++ G P+ +YNT+ +G+ +A + +EML +G+ P+ T + S
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 183/438 (41%), Gaps = 74/438 (16%)
Query: 135 RGFSPDVVTYNIMIGSLCSRGMIESA-----------------FKV-------------- 163
RGF ++ I+I +L + A F V
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 164 -FDQLLRDNCKPT-----VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFV 217
FD L++ + V+ + ++I L + LL G+ K G A +
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH--GLVKFRHFGLAMELF 215
Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
+ S G +PDV Y ++R+L + ++++ M + G + N+V Y++LI LC+
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM------------ 325
K +AV + + K L PD +Y L+ CK ++ +E +D M
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 326 -----------------------ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSD 362
+ G P++ YN ++ + CK +A +F+++
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 363 VGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
+G PN +Y+ + G AL + EM+ G++ YNSLI+ C+ G +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 423 AVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
A G + +M + + PTV++Y ++ G+C +IN+++ + M KG P+ T+ L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 483 GIGYGGWRAEAMELANAL 500
G+ G +A++L N +
Sbjct: 516 GLFRAGLIRDAVKLFNEM 533
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 146/358 (40%), Gaps = 60/358 (16%)
Query: 29 HLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKS 88
H + ++ E + L+ R GK +E+L + MV G D+V
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV--------------- 648
Query: 89 NKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
Y LI G K +L +L + RG PD V Y MI
Sbjct: 649 -------------------CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKG 208
+ G + AF ++D ++ + C P +TYT +I G+CK G
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN------------------GLCKAG 731
Query: 209 MVGQAFQFVRSLESRGCQPDVISYNMLLRTL----LNMGKWEEGEKLMTEMISRGLEPNV 264
V +A ++ P+ ++Y L L ++M K E + I +GL N
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANT 787
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
TY++LI CR G+ E+A +++ G++PD +Y +I+ C+ + AIE +
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
M G PD V YNT++ C G +A E+ ++ G PN + T S SS
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSS 905
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 256/553 (46%), Gaps = 78/553 (14%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
E + +KL S D+++ F + MV + V C K+I F + + + A+ +
Sbjct: 71 EGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYR 130
Query: 97 ILEKYGEP-DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
+E P +++++N LI FC +++ + +L GF PDVVT+N ++ LC
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 156 -----------MIESAF----KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLD 200
M+E+ F +FDQ++ P VIT+ LI LEG+ +A L++
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 201 EM-----------------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
+M GMCK G A + +E +PDV+ Y+ ++ L G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYD 303
+ + L +EM+ +G+ PNV TY+ +I C G+ DA +LR E+ + PD +++
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 304 PLISA-----------------------------------YCKDGRLDLAIEFLDYMISD 328
LISA +CK R D A D M S
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
PD+V +NTI+ +C+ D+ +++ ++S G N ++YNT+ + A
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
+ EM+S G+ PD IT N L+ C + ++EA+ L ++ ++ ++YNIII G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISR 508
CK +++E+ ++ ++ G +P+ TY ++I G+ G A +++A V H +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS--GFCGKSA----ISDANVLFHKMKD 600
Query: 509 DTFKRLNRTFPLL 521
+ + N T+ L
Sbjct: 601 NGHEPDNSTYNTL 613
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 23/431 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F LI G+ E+ + MV G DVV ++ + + A+ ++ +E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 100 K-YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
+ + +PDV Y+A+I CK A + + +G +P+V TYN MI CS G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
A ++ ++ P V+T+ LI A++ EG+ +A KL DEM
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---------------- 392
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
R PD ++YN ++ ++++ + + M S P+VVT++ +I CR
Sbjct: 393 --LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYN 338
+ ++ + +LR +GL + +Y+ LI +C+ L+ A + MIS G PD + N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 339 TILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK 398
+L FC+N ++ALE+FE + + +YN + + A + +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 399 GIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINES 458
G+EPD TYN +IS C + +A L M+ P +YN +I G K I++S
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 459 IEVLAAMFEKG 469
IE+++ M G
Sbjct: 627 IELISEMRSNG 637
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 19/335 (5%)
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
A R +E R ++ S+N+L++ + K ++ G +P+VVT++ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 273 SLCRDGKTEDA---------------VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDL 317
LC + + +A V + E GLTP +++ LI+ C +GR+
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 318 AIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
A ++ M+ G D+V Y TI+ CK G+ AL + K+ + P+V Y+ +
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
L G A + SEML KGI P+ TYN +I C G +A LL DM P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 438 TVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELA 497
V+++N +I K ++ E+ ++ M + P+ TY +I G +A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 498 NALVSMHAISRDT----FKRLNRTFPLLDVYKEIS 528
+ + S ++ +T + R R + + +EIS
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 34 DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR 93
D+ + +I + K DE+ S+ +G +PDV +I F + + A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 94 VMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 152
+ ++ G EPD YN LI G KA +I+ + +++ +RS GFS D T M+ L
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLI 652
Query: 153 SRGMIESAF 161
+ G ++ +F
Sbjct: 653 TDGRLDKSF 661
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 221/445 (49%), Gaps = 18/445 (4%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAY 109
G+ E+ + + M G PDV+ + ++ + + + +K +++E++++ G +P+ + Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
++I C+ ++ A + + +G PD V Y +I C RG I +A K F ++
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
+ P V+TYT +I G +A KL EM G CK G +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
AF+ + GC P+V++Y L+ L G + +L+ EM GL+PN+ TY+ +++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
LC+ G E+AV ++ + GL D +Y L+ AYCK G +D A E L M+ G P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
IV +N ++ FC +G + ++ + G PN +++N++ + A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
+M S+G+ PD TY +L+ C+ + EA L +M+ F +V +Y+++I GF K
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 453 RRINESIEVLAAMFEKGCKPNETTY 477
++ E+ EV M +G ++ +
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF 704
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 204/398 (51%), Gaps = 20/398 (5%)
Query: 86 RKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYN 145
++++ + +ME+ K PDV +Y+ +++G+C+ +++ K+++ ++ +G P+ Y
Sbjct: 263 KEAHHLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 146 IMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMC 205
+IG LC + A + F +++R P + YT LI G C
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID------------------GFC 362
Query: 206 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVV 265
K+G + A +F + SR PDV++Y ++ +G E KL EM +GLEP+ V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 266 TYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYM 325
T++ LI+ C+ G +DA V + G +P+ +Y LI CK+G LD A E L M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 326 ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDK 385
G P+I YN+I+ CK+GN ++A+++ + G + +Y T+ A SG+
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 386 IRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
+A ++ EML KG++P +T+N L++ C GM+++ LL M + P ++N +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEG 483
+ +C + + + M +G P+ TY L++G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 196/378 (51%), Gaps = 18/378 (4%)
Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
+V +YN +I C+ +I+ A+ +L + +G++PDV++Y+ ++ C G ++ +K+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRG 224
+ + R KP Y +I +C+ + +A + + +G
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGL------------------LCRICKLAEAEEAFSEMIRQG 346
Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
PD + Y L+ G K EM SR + P+V+TY+ +IS C+ G +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
+ KGL PD+ ++ LI+ YCK G + A ++MI GC P++V Y T++
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDE 404
CK G+ D A E+ ++ +G PN+ +YN++ + L SG+ A+ ++ E + G+ D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 405 ITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAA 464
+TY +L+ C+ G +D+A +L +M +PT++++N+++ GFC + + ++L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 465 MFEKGCKPNETTYVLLIE 482
M KG PN TT+ L++
Sbjct: 587 MLAKGIAPNATTFNSLVK 604
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 18/378 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
R K E+ M+ G PD V+ T LI F + A + E+ + PDV
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y A+ISGFC+ + A K+ + +G PD VT+ +I C G ++ AF+V + +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
++ C P V+TYT LI EG D A +LL EM G+CK G +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+A + V E+ G D ++Y L+ G+ ++ ++++ EM+ +GL+P +VT+++L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
++ C G ED +L KG+ P+A +++ L+ YC L A M S G
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
PD Y ++ CK N +A +F+++ G +VS+Y+ + + A
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 391 MISEMLSKGIEPDEITYN 408
+ +M +G+ D+ ++
Sbjct: 688 VFDQMRREGLAADKEIFD 705
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 3/287 (1%)
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
V + + G P V +++ + L++ G E ++ +M++ GL +V + ++ ++ L +
Sbjct: 165 VYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 277 DG-KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
D KT A+ V R E G+ + SY+ +I C+ GR+ A L M G PD++
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
+Y+T++ +C+ G D+ ++ E + G PN Y ++ L A SEM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
+ +GI PD + Y +LI C+ G + A +M S P V++Y II GFC+ +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
E+ ++ MF KG +P+ T+ LI G G +A + N ++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 18/307 (5%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
F +LI +AG ++ M+ GC P+VV T LI +E + A ++ +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
K G +P++F YN++++G CK+ IE A K++ + G + D VTY ++ + C G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM---------------- 202
A ++ ++L +PT++T+ +L+ L G + KLL+ M
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 203 -GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
C + + A + + SRG PD +Y L++ +E L EM +G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
+V TYS+LI + K +A +V + +GL D +D K R D ++
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 723
Query: 322 LDYMISD 328
+D +I +
Sbjct: 724 IDEIIEN 730
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 227/460 (49%), Gaps = 46/460 (10%)
Query: 54 DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVFAYNAL 112
D + + M GCKP+ L++ + + ++K + ++ +E +G P+ YN +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 113 ISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNC 172
+S FC+ + + + K+++++R G PD+VT+N I +LC G + A ++F + D
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 173 ----KPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPD 228
+P ITY ++++ G CK G++ A S+
Sbjct: 284 LGLPRPNSITYNLMLK------------------GFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
+ SYN+ L+ L+ GK+ E E ++ +M +G+ P++ +Y+IL+ LC+ G DA ++
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
K G+ PDA +Y L+ YC G++D A L M+ + CLP+ N +L + K G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG--------- 399
+A E+ K+++ G + + N + L SG+ +A+ ++ M G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 400 ----------IE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNII 445
IE PD ITY++L++ LC+ G EA L +M + +P ++YNI
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 446 ILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIG 485
I FCK +I+ + VL M +KGC + TY LI G+G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 240/545 (44%), Gaps = 81/545 (14%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
E F L++ +AG D+ L + +M + G P+ V+ ++ F +E +++ + +++E
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 241
Query: 97 ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGF----SPDVVTYNIMIGSL 151
+ + G PD+ +N+ IS CK ++ A+++ + + P+ +TYN+M+
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301
Query: 152 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM--------- 202
C G++E A +F+ + ++ ++ +Y I +Q + G+ +A +L +M
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361
Query: 203 --------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 254
G+CK GM+ A V ++ G PD ++Y LL ++GK + + L+ E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 255 MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 314
M+ PN T +IL+ SL + G+ +A ++LR EKG D + + ++ C G
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481
Query: 315 LDLAIEFL-----------------------DYMISDGCLPDIVNYNTILAA-------- 343
LD AIE + D +I + CLPD++ Y+T+L
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541
Query: 344 ---------------------------FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMF 376
FCK G A + + + GC ++ +YN++
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
L G++ EM KGI P+ TYN+ I LC V++A LL +M
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
P V S+ +I FCK + + EV C E Y L+ + G +A EL
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATEL 720
Query: 497 ANALV 501
A++
Sbjct: 721 LEAVL 725
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 237/501 (47%), Gaps = 32/501 (6%)
Query: 9 NPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC 68
NP+ R+ + +H +S D T I R K E + + +++ +
Sbjct: 15 NPRLAWRIFKRIFSSPSEESHGISLDATPT-----IARILVRAKMHEEIQELHNLILSSS 69
Query: 69 --KPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY---GEPDVFAYNALISGFCKANQIE 123
K + ++ F + +KA +++ +P V+ YN L+ K ++E
Sbjct: 70 IQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVE 129
Query: 124 LANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILI 183
+ + + G +P T+N++I +LC +++A ++FD++ CKP T+ IL+
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189
Query: 184 QATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 243
+ G CK G+ + + + ++ES G P+ + YN ++ + G
Sbjct: 190 R------------------GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDV---LRAAKEKGLT-PDA 299
+ ++ EK++ +M GL P++VT++ IS+LC++GK DA + + + GL P++
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 300 YSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEK 359
+Y+ ++ +CK G L+ A + + + L + +YN L ++G +A + ++
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 360 LSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGM 419
++D G P++ SYN + L G A ++ M G+ PD +TY L+ C G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 420 VDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVL 479
VD A LL +M P + NI++ K RI+E+ E+L M EKG + T +
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 480 LIEGIGYGGWRAEAMELANAL 500
+++G+ G +A+E+ +
Sbjct: 472 IVDGLCGSGELDKAIEIVKGM 492
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 178/402 (44%), Gaps = 76/402 (18%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P +++YN L+ G CK + A ++ ++ G PD VTY ++ CS G +++A +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCK 206
+++R+NC P T IL+ + G+ +A +LL +M G+C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 207 KGMVGQAFQFVRSLESRG-----------------------CQPDVISYNMLLRTLLNMG 243
G + +A + V+ + G C PD+I+Y+ LL L G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 244 KWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR--------------- 288
++ E + L EM+ L+P+ V Y+I I C+ GK A VL+
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 289 --------------------AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
KEKG++P+ +Y+ I C+ +++ A LD M+
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
P++ ++ ++ AFCK + D A E+FE + C Y+ MF+ L ++G ++A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKA 717
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDM 430
++ +L +G E Y L+ LC+ ++ A G+L M
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 150/387 (38%), Gaps = 76/387 (19%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
L+ ++ G+ E+ + M G D V C ++ + +KA+ +++ + +G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 103 E------------------------PDVFAYNALISGFCKANQIELANKVLDRLRSRGFS 138
PD+ Y+ L++G CKA + A + +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 139 PDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKL 198
PD V YNI I C +G I SAF+V + + C ++ TY LI ++ Q + L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 199 LDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
+DEM + +G P++ +YN ++ L K E+ L+ EM+ +
Sbjct: 617 MDEM------------------KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 259 GLEPNVVTYSILISSLCR----------------------------------DGKTEDAV 284
+ PNV ++ LI + C+ G+ A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718
Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAF 344
++L A ++G + Y L+ + CK L++A L MI G D ++
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 345 CKNGNADQALEIFEKLSDVGCPPNVSS 371
K GN +A +K+ ++ V++
Sbjct: 779 GKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
+P YN L+ ++ V+ L DM P ++N++I C + ++ + E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+ M EKGCKPNE T+ +L+ G G + +EL NA+ S
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 231/486 (47%), Gaps = 23/486 (4%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
++K +G D + ++ M+A+GC+P+VV+ T LIK F Q + A+RV++ +++ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
PD+F YN+LI G KA +++ A L + G P+ TY I SA
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
K ++ P + T LI +G+ +A M G+
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
K V A + R + +G PDV SY +L+ +G ++ + EM+ GL PNV
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
+ Y++L+ CR G+ E A ++L KGL P+A +Y +I YCK G L A D
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
M G +PD Y T++ C+ + ++A+ IF + GC + + +N + + ++ G
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGK 781
Query: 385 KIRALGMISEMLSKGIE----PDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 440
+++ ++ + P+++TYN +I LC++G ++ A L M++ PTVI
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 441 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
+Y ++ G+ K R E V G +P+ Y ++I G +A+ L + +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 501 VSMHAI 506
+ +A+
Sbjct: 902 FAKNAV 907
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 18/380 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P AY +LI G+C+ + ++L ++ R TY ++ +CS G ++ A+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
+++ C+P V+ YT LI+ + + AM++L EM + +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM------------------KEQ 481
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G PD+ YN L+ L + +E + EM+ GL+PN TY IS + A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
++ +E G+ P+ LI+ YCK G++ A M+ G L D Y ++
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
KN D A EIF ++ G P+V SY + + G+ +A + EM+ +G+ P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
I YN L+ CR G +++A LL +M P ++Y II G+CK+ + E+ +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 464 AMFEKGCKPNETTYVLLIEG 483
M KG P+ Y L++G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG 741
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 21/487 (4%)
Query: 45 KRSFRAGKF--DESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
++ FR D +L ESM+ G P LI + ++ A ++ ++ G
Sbjct: 248 EKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
D Y+ LI G K + A ++ + S G + Y+ I + G++E A
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GM 204
+FD ++ P Y LI+ E + +LL EM GM
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 205 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 264
C G + A+ V+ + + GC+P+V+ Y L++T L ++ + +++ EM +G+ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 265 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 324
Y+ LI L + + ++A L E GL P+A++Y IS Y + A +++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 325 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 384
M G LP+ V ++ +CK G +A + + D G + +Y + + L+ +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 385 KIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNI 444
A + EM KGI PD +Y LI+ + G + +A + +M P VI YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 445 IILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
++ GFC++ I ++ E+L M KG PN TY +I+G G AEA L + + +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLK 726
Query: 505 AISRDTF 511
+ D+F
Sbjct: 727 GLVPDSF 733
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 183/405 (45%), Gaps = 38/405 (9%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
LI + GK E+ SMV G D T L+ F+ K + A + + G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 103 -EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
PDVF+Y LI+GF K ++ A+ + D + G +P+V+ YN+++G C G IE A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 162 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE 221
++ D++ P +TY +I G +A +L DEM + KG+V +F + ++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPDSFVYTTLVD 740
Query: 222 S------------------RGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE-- 261
+GC +N L+ + GK E L TE+++R ++
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE----LKTEVLNRLMDGS 796
Query: 262 ------PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 315
PN VTY+I+I LC++G E A ++ + L P +Y L++ Y K GR
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 316 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL-----SDVGCPPNVS 370
D I+ G PD + Y+ I+ AF K G +AL + +++ D GC ++S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 371 SYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC 415
+ + S G+ A ++ M+ PD T LI+ C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 11/399 (2%)
Query: 105 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 164
D + L G+ IE A V P + +++ +L ++ + V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 165 DQLLRDNCKPTVITYTILIQATMLEGQT----DKAMKLLDEMGMCKKGMVGQAFQFVRSL 220
++ N V TY +LI A G D K E + G A + S+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG-ALKLKESM 268
Query: 221 ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKT 280
+G P +Y++L+ L + + E+ + L+ EM S G+ + TYS+LI L +
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 281 EDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTI 340
+ A ++ G+ Y YD I K+G ++ A D MI+ G +P Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 341 LAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGI 400
+ +C+ N Q E+ ++ + +Y T+ + SSGD A ++ EM++ G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 401 EPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIE 460
P+ + Y +LI ++ +A+ +L +M+ P + YN +I+G K +R++E+
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 461 VLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANA 499
L M E G KPN TY I G EA E A+A
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGY------IEASEFASA 541
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 178/432 (41%), Gaps = 33/432 (7%)
Query: 51 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME-ILEKYGEPDVFAY 109
G +E+++ S + P + C L+ + + + V + ++E+ DV Y
Sbjct: 165 GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
+ LI C+A ++L VL + + T N+ + A K+ + ++
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTA---TLNV-----------DGALKLKESMIC 270
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDV 229
P TY +LI G+CK + A + ++S G D
Sbjct: 271 KGLVPLKYTYDVLID------------------GLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 230 ISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRA 289
+Y++L+ LL + + L+ EM+S G+ Y I + ++G E A +
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 290 AKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGN 349
GL P A +Y LI YC++ + E L M + Y T++ C +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 350 ADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNS 409
D A I +++ GC PNV Y T+ + A+ ++ EM +GI PD YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 410 LISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
LI L + +DEA LV+M +P +Y I G+ + + + + M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 470 CKPNETTYVLLI 481
PN+ LI
Sbjct: 553 VLPNKVLCTGLI 564
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 33/258 (12%)
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISR-------------------GLEPNVVTYSILI 271
S++ L L N G +E+ ++ MI R G + V + IL
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 272 SSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL 331
G E+AV V ++ L P L+ A + RLDL + M+ +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 332 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 391
D+ Y+ ++ A C+ GN ++ K + T + L G AL +
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTE--------KEFRT--ATLNVDG----ALKL 264
Query: 392 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 451
M+ KG+ P + TY+ LI LC+ +++A LLV+M+S +Y+++I G K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 452 TRRINESIEVLAAMFEKG 469
R + + ++ M G
Sbjct: 325 GRNADAAKGLVHEMVSHG 342
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 230/461 (49%), Gaps = 19/461 (4%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
+ + + ++ + KF+++L M + P +V ++L+ + K + +
Sbjct: 44 RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103
Query: 97 ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
LE G D++++ LI FC+ ++ LA L ++ GF P +VT+ ++ C
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQ 215
A + DQ++ +P V+ Y +I + +C+KG V A
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDS------------------LCEKGQVNTALD 205
Query: 216 FVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC 275
++ ++ G +PDV++YN L+ L + G W +++++M+ G+ P+V+T+S LI
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 276 RDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIV 335
++G+ +A ++ + P+ +Y+ LI+ C G LD A + L+ ++S G P+ V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 336 NYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
YNT++ +CK D ++I +S G + +YNT++ +G A ++ M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
+S G+ PD T+N L+ LC G + +A+ L D++ ++ +I+YNIII G CK ++
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
++ + ++ KG P+ TY+ ++ G+ EA EL
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 222/473 (46%), Gaps = 29/473 (6%)
Query: 11 KSNERVRVSSSAET-RPNTHLLSF-DVKETQ-------FMKLIKRSFRAGKFDESLYFIE 61
+S+ R R+ S + + N L F D+ E+ F +L+ + K++ +
Sbjct: 44 RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103
Query: 62 SMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALISGFCKAN 120
+ G D+ T LI F + + + A+ + + K G EP + + +L++GFC N
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 121 QIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYT 180
+ A ++D++ G+ P+VV YN +I SLC +G + +A V + + +P V+TY
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
Query: 181 ILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLL 240
LI G + ++L +M G PDVI+++ L+
Sbjct: 224 SLITRLFHSGTWGVSARILSDM------------------MRMGISPDVITFSALIDVYG 265
Query: 241 NMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAY 300
G+ E +K EMI R + PN+VTY+ LI+ LC G ++A VL KG P+A
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 301 SYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKL 360
+Y+ LI+ YCK R+D ++ L M DG D YNT+ +C+ G A ++ ++
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 361 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMV 420
G P++ ++N + L G +AL + ++ ITYN +I LC+ V
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 421 DEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMF-EKGCKP 472
++A L + P VI+Y +++G + R E+ E+ M E G P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 145/285 (50%)
Query: 218 RSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRD 277
R LE G D+ S+ L+ + + +M+ G EP++VT+ L++ C
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 278 GKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNY 337
+ +A+ ++ G P+ Y+ +I + C+ G+++ A++ L +M G PD+V Y
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 338 NTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLS 397
N+++ +G + I + +G P+V +++ + G + A +EM+
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 398 KGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINE 457
+ + P+ +TYNSLI+ LC G++DEA +L + S F P ++YN +I G+CK +R+++
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 458 SIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+++L M G + TY L +G G + A ++ +VS
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 4/292 (1%)
Query: 215 QFVRSLESRGCQPDVIS----YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
V +L R C S Y LR+ L+ K+ + L +M P++V +S L
Sbjct: 26 NLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRL 85
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
+ ++ + K E + + R + G++ D YS+ LI +C+ RL LA+ L M+ G
Sbjct: 86 LIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF 145
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
P IV + +++ FC +A+ + +++ +G PNV YNT+ +L G AL
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
++ M GI PD +TYNSLI+ L G + +L DM P VI+++ +I +
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
K ++ E+ + M ++ PN TY LI G+ G EA ++ N LVS
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 70/153 (45%)
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
+ AL +F +++ P++ ++ + A+ + + + GI D ++ +L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
I C CR + A+ L M F P+++++ ++ GFC R E++ ++ + G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSM 503
+PN Y +I+ + G A+++ + M
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 223/432 (51%), Gaps = 22/432 (5%)
Query: 53 FDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNA 111
+E + M+ + P +V +K++ K + + + + + +E G D+++YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 112 LISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDN 171
+I+ C+ ++ +A V+ ++ G+ PDVVT + +I C + A + ++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 172 CKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVIS 231
+P V+ Y +I G CK G+V A + +E G + D ++
Sbjct: 170 FRPDVVIYNTIID------------------GSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAK 291
YN L+ L G+W + +LM +M+ R + PNV+T++ +I ++GK +A+ +
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 292 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNAD 351
+ + PD ++Y+ LI+ C GR+D A + LD M++ GCLPD+V YNT++ FCK+ D
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 352 QALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLI 411
+ ++F +++ G + +YNT+ + +G A + S M S+ P+ TY+ L+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILL 388
Query: 412 SCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCK 471
LC + V++A+ L +M+ + + +YNI+I G CK + ++ ++ ++ KG K
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 472 PNETTYVLLIEG 483
P+ +Y +I G
Sbjct: 449 PDVVSYTTMISG 460
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 50/369 (13%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
R +F +L + M+ G +PDVV + LI F Q + A+ ++ +E+ G PDV
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
YN +I G CK + A ++ DR+ G D VTYN ++ LC G A ++ +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
+ + P VIT+T +I + EG+ +AMKL +EM G+C G V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGL---------- 260
+A Q + + ++GC PDV++YN L+ + +EG KL EM RGL
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 261 ----------------------EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPD 298
PN+ TYSIL+ LC + + E A+ + ++ + D
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 299 AYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
+Y+ +I CK G ++ A + + G PD+V+Y T+++ FC+ D++ ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 359 KLSDVGCPP 367
K+ + G P
Sbjct: 476 KMQEDGLLP 484
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 187/397 (47%), Gaps = 21/397 (5%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P + ++ ++S K+ +L + + G D+ +YNI+I LC A V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
++++ +P V+T + LI G C+ V A V +E
Sbjct: 127 VGKMMKFGYEPDVVTVSSLIN------------------GFCQGNRVFDAIDLVSKMEEM 168
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
G +PDV+ YN ++ +G + +L M G+ + VTY+ L++ LC G+ DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
++R + + P+ ++ +I + K+G+ A++ + M PD+ YN+++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
C +G D+A ++ + + GC P+V +YNT+ + S + EM +G+ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
ITYN++I + G D A + M+S RP + +Y+I++ G C R+ +++ +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
M + + + TTY ++I G+ G +A +L +L
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 18/340 (5%)
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQF 216
+E +F ++++ P+++ ++ ++ D + L M +C
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC----------- 98
Query: 217 VRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCR 276
G D+ SYN+++ L ++ ++ +M+ G EP+VVT S LI+ C+
Sbjct: 99 -------GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
Query: 277 DGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVN 336
+ DA+D++ +E G PD Y+ +I CK G ++ A+E D M DG D V
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 337 YNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEML 396
YN+++A C +G A + + PNV ++ + G A+ + EM
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 397 SKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRIN 456
+ ++PD TYNSLI+ LC G VDEA +L M + P V++YN +I GFCK++R++
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 457 ESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
E ++ M ++G + TY +I+G G A E+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 80/152 (52%)
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
N ++ +++F K+ P++ ++ + S + S + + + M GI D +YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 409 SLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEK 468
+I+CLCR A+ ++ M + P V++ + +I GFC+ R+ ++I++++ M E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 469 GCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
G +P+ Y +I+G G +A+EL + +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%)
Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
L + +K + V P + FS SS + + + +M+ P + ++ ++S
Sbjct: 19 LCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSK 78
Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
+ + D + L ME + SYNI+I C+ R ++ V+ M + G +P+
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSM 503
T LI G G +A++L + + M
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 221/429 (51%), Gaps = 19/429 (4%)
Query: 55 ESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFAYNALI 113
E++ M+ G +P + + L+ + R + + +++ +E G +P+V+ + I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 114 SGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCK 173
+A +I A ++L R+ G PDVVTY ++I +LC+ ++ A +VF+++ K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 174 PTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYN 233
P +TY T+L+ +D + LD + QF +E G PDV+++
Sbjct: 326 PDRVTYI-----TLLDRFSDN--RDLDSVK-----------QFWSEMEKDGHVPDVVTFT 367
Query: 234 MLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
+L+ L G + E + M +G+ PN+ TY+ LI L R + +DA+++ +
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
G+ P AY+Y I Y K G A+E + M + G P+IV N L + K G +A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
+IF L D+G P+ +YN M G+ A+ ++SEM+ G EPD I NSLI+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
L + VDEA + + M+ + +PTV++YN ++ G K +I E+IE+ M +KGC PN
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 474 ETTYVLLIE 482
T+ L +
Sbjct: 608 TITFNTLFD 616
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 207/437 (47%), Gaps = 20/437 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-YGEPDVF 107
RAGK +E+ ++ M GC PDVV T LI RK + A V E ++ +PD
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y L+ F ++ + + G PDVVT+ I++ +LC G AF D +
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
P + TY LI + + D A++L M ES G +P
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM------------------ESLGVKP 431
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+Y + + G + +M ++G+ PN+V + + SL + G+ +A +
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
K+ GL PD+ +Y+ ++ Y K G +D AI+ L M+ +GC PD++ N+++ K
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
D+A ++F ++ ++ P V +YNT+ + L +G A+ + M+ KG P+ IT+
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N+L CLC++ V A+ +L M P V +YN II G K ++ E++ M +
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-K 670
Query: 468 KGCKPNETTYVLLIEGI 484
K P+ T L+ G+
Sbjct: 671 KLVYPDFVTLCTLLPGV 687
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 239/544 (43%), Gaps = 92/544 (16%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRV-MEILEKYGEPDVF 107
+ G+ DE++ + M+ NGC+PDV++ LI ++ + ++A ++ M + E +P V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
YN L++G K +I+ A ++ + + +G P+ +T+N + LC + A K+ ++
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------GMCKKGMVG 211
+ C P V TY +I + GQ +AM +M G+ K ++
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 212 QAFQFVRS-LESRGCQPDVISYNMLLRTLLNMGKWEEG----EKLMTEMISR-------- 258
A++ + + L + QP + + L+ ++L + E+L+ I R
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 259 -------------------------GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEK 293
G++P + TY++LI L E A DV K
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
G PD +Y+ L+ AY K G++D E M + C + + +N +++ K GN D A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 354 L------------------------------------EIFEKLSDVGCPPNVSSYNTMFS 377
L ++FE + D GC PN + YN + +
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
+G+ A + M+ +G+ PD TY+ L+ CLC G VDE + +++ + P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 438 TVISYNIIILGFCKTRRINESIEVLAAM-FEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
V+ YN+II G K+ R+ E++ + M +G P+ TY LI +G G EA ++
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 497 ANAL 500
N +
Sbjct: 1055 YNEI 1058
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 228/513 (44%), Gaps = 61/513 (11%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVF 107
+ GK E++ E MV GC P+ + L + + A++++ ++++ PDVF
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
YN +I G K Q++ A +++ + PD VT ++ + +IE A+K+
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 168 LRDNC--KPTVITYTILIQATMLEGQTDKAMKLLDEM---GMCKKG-------------- 208
L NC +P + + LI + + E D A+ + + G+C+ G
Sbjct: 704 LY-NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 209 -------------------------------------MVGQAFQFVRSLESRGCQPDVIS 231
M+ A ++S GC PDV +
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 232 YNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR-AA 290
YN LL GK +E +L EM + E N +T++I+IS L + G +DA+D+
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
++ +P A +Y PLI K GRL A + + M+ GC P+ YN ++ F K G A
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
D A +F+++ G P++ +Y+ + L G L E+ G+ PD + YN +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 411 ISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKG 469
I+ L + ++EA+ L +M+++R P + +YN +IL + E+ ++ + G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 470 CKPNETTYVLLIEGIGYGGWRAEAMELANALVS 502
+PN T+ LI G G A + +V+
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 21/364 (5%)
Query: 117 CKANQIELANKVLDRL-RSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPT 175
CK N + A + ++ + G P + TYN++IG L MIE A VF Q+ C P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 176 VITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNML 235
V TY L LD G K G + + F+ + + + C+ + I++N++
Sbjct: 820 VATYNFL----------------LDAYG--KSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 236 LRTLLNMGKWEEGEKLMTEMIS-RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 294
+ L+ G ++ L +++S R P TY LI L + G+ +A + + G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 295 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 354
P+ Y+ LI+ + K G D A M+ +G PD+ Y+ ++ C G D+ L
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 355 EIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEM-LSKGIEPDEITYNSLISC 413
F++L + G P+V YN + + L S AL + +EM S+GI PD TYNSLI
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
L GMV+EA + +++ P V ++N +I G+ + + + V M G PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 474 ETTY 477
TY
Sbjct: 1102 TGTY 1105
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 230/529 (43%), Gaps = 60/529 (11%)
Query: 32 SFDVKETQFMKLIKRSF--RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSN 89
S VK T + ++ + ++G +L E M G P++V C + + +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 90 KAVRVMEILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMI 148
+A ++ L+ G PD YN ++ + K +I+ A K+L + G PDV+ N +I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 149 GSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------ 202
+L ++ A+K+F ++ KPTV+TY L+ G+ +A++L + M
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 203 -----------GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 251
+CK V A + + + GC PDV +YN ++ L+ G+ +E
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 252 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL-RAAKEKGLTPDAYSYDPLISAYC 310
+M + + P+ VT L+ + + EDA ++ P ++ LI +
Sbjct: 666 FHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 311 KDGRLDLAIEFLDYMISDGCL-------------------------------------PD 333
+ +D A+ F + ++++G P
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 334 IVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMIS 393
+ YN ++ + + A ++F ++ GC P+V++YN + A SG +
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 394 EMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR-FRPTVISYNIIILGFCKT 452
EM + E + IT+N +IS L + G VD+A+ L D+ S R F PT +Y +I G K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALV 501
R+ E+ ++ M + GC+PN Y +LI G G G A L +V
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 182/393 (46%), Gaps = 28/393 (7%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANG-CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKY 101
LI D ++ F E +VANG C+ + +I+ K N + EK+
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR---YSCKHNNVSGARTLFEKF 775
Query: 102 G-----EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGM 156
+P + YN LI G +A+ IE+A V +++S G PDV TYN ++ + G
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 157 IESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-------------- 202
I+ F+++ ++ C+ IT+ I+I + G D A+ L ++
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
G+ K G + +A Q + GC+P+ YN+L+ G+ + L M+
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
G+ P++ TYS+L+ LC G+ ++ + + KE GL PD Y+ +I+ K RL+ A
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 319 IEFLDYM-ISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFS 377
+ + M S G PD+ YN+++ G ++A +I+ ++ G PNV ++N +
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 378 ALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
SG A + M++ G P+ TY L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 35/311 (11%)
Query: 220 LESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGK 279
++ R + D +Y + ++L G ++ + +M G N +Y+ LI L +
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 280 TEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNT 339
+A++V R +G P +Y L+ K +D + L M + G P++ +
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 340 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS----------------- 382
+ + G ++A EI +++ D GC P+V +Y + AL ++
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 383 --GDKIRALGMI----------------SEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
D++ + ++ SEM G PD +T+ L+ LC+ G EA
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 425 GLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGI 484
L M P + +YN +I G + R+++++E+ M G KP TY++ I+
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 485 GYGGWRAEAME 495
G G A+E
Sbjct: 444 GKSGDSVSALE 454
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 233 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE 292
N +L L GK EE + M R ++ + TY + SL G + A LR +E
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 293 KGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQ 352
G +AYSY+ LI K A+E MI +G P + Y++++ K + D
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 353 ALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLIS 412
+ + +++ +G PNV ++ L +G A ++ M +G PD +TY LI
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
LC +D A + M++ R +P ++Y ++ F R ++ + + M + G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 473 NETTYVLLIEGIGYGGWRAEAMELANAL 500
+ T+ +L++ + G EA + + +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVM 389
>sp|Q9LSQ2|PP239_ARATH Putative pentatricopeptide repeat-containing protein At3g16890,
mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1
Length = 659
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 217/465 (46%), Gaps = 54/465 (11%)
Query: 103 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 162
+P YNA+I K+N ++LA ++RS G PD TYNI+I +C +G+++ A +
Sbjct: 177 KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIR 236
Query: 163 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGM------------------ 204
+ Q+ ++ +P V TYTILI ++ G+ D+A+K L+ M +
Sbjct: 237 LVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 205 -----CK-----------------------------KGMVGQAFQFVRSLESRGCQPDVI 230
CK M + QF+R + RG PD
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 231 SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 290
++N + LL E ++ +SRG++P Y +L+ +L + + L+
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 291 KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 350
GL YSY+ +I CK R++ A FL M G P++V +NT L+ + G+
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 351 DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 410
+ + EKL G P+V +++ + + L + + A EML GIEP+EITYN L
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 411 ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 470
I C G D +V L M+ P + +YN I FCK R++ ++ E+L M G
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 471 KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF-KRL 514
KP+ TY LI+ + G +EA E+ ++ + H D++ KRL
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSS-IERHGCVPDSYTKRL 640
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 217/454 (47%), Gaps = 22/454 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
++ D + + M ++GCKPD LI ++ ++A+R+++ +E+ G P+VF
Sbjct: 192 KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVF 251
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y LI GF A +++ A K L+ +R R +P+ T + + AF+V
Sbjct: 252 TYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGF 311
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLE------ 221
+ + + Y ++ + + L ++G ++G + + F ++
Sbjct: 312 MEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG--ERGYIPDSSTFNAAMSCLLKGH 369
Query: 222 -------------SRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
SRG +P Y +L++ LLN ++ EG++ + +M GL +V +Y+
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYN 429
Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
+I LC+ + E+A L +++G++P+ +++ +S Y G + L+ ++
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
G PD++ ++ I+ C+ A + F+++ + G PN +YN + + S+GD R+
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
+ + ++M G+ PD YN+ I C+ V +A LL M +P +Y+ +I
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIE 482
++ R +E+ E+ +++ GC P+ T L+ E
Sbjct: 610 LSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 305 LISAYCKDGRLDLAIEFLD------YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFE 358
L +A + G L L++E L Y ISD + ++ ++ + G A ++F
Sbjct: 116 LGNALFRKGPLLLSMELLKEIRDSGYRISDELMC------VLIGSWGRLGLAKYCNDVFA 169
Query: 359 KLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 418
++S +G P+ YN + AL S A +M S G +PD TYN LI +C+ G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 419 MVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYV 478
+VDEA+ L+ ME RP V +Y I+I GF R++E+++ L M + PNE T
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 479 LLIEGI 484
+ GI
Sbjct: 290 TFVHGI 295
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 35/270 (12%)
Query: 250 KLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAY 309
+L+ E+ G + +LI S R G + DV G+ P Y+ +I A
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 310 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 369
K LDLA M SDGC PD YN ++ CK G D+A+ + +++ G PNV
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 370 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEIT----------------------- 406
+Y + +G AL + M + + P+E T
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG 310
Query: 407 ------------YNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
Y++++ CL + M E L + + P ++N + K
Sbjct: 311 FMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHD 370
Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGI 484
+ E+ + +G KP Y++L++ +
Sbjct: 371 LVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME 96
E + LI+ G D S+ M NG PD+ I+ F + RK KA +++
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 97 ILEKYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVT 143
+ + G +PD F Y+ LI ++ + A ++ + G PD T
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%)
Query: 377 SALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFR 436
+AL+ G + ++ ++ E+ G + LI R G+ + + +
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 437 PTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
P+ YN +I K+ ++ + M GCKP+ TY +LI G+ G EA+ L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 497 ANAL 500
+
Sbjct: 238 VKQM 241
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 226/464 (48%), Gaps = 17/464 (3%)
Query: 50 AGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAY 109
AGKFDE+ +E A G P V+ ++ + K ++A++V E ++K P++ Y
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTY 380
Query: 110 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 169
N LI C+A +++ A ++ D ++ G P+V T NIM+ LC ++ A +F+++
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 170 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQ 212
C P IT+ LI G+ D A K+ ++M G
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 213 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 272
+ + + ++ C PD+ N + + G+ E+G + E+ +R P+ +YSILI
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 273 SLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLP 332
L + G + ++ + KE+G D +Y+ +I +CK G+++ A + L+ M + G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 333 DIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMI 392
+V Y +++ K D+A +FE+ NV Y+++ G A ++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 393 SEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKT 452
E++ KG+ P+ T+NSL+ L + ++EA+ M+ + P ++Y I+I G CK
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 453 RRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
R+ N++ M ++G KP+ +Y +I G+ G AEA L
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 225/466 (48%), Gaps = 19/466 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVF 107
+A K E ++ M +P T LI F S+ + + + +++ G EP V
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
+ LI GF K +++ A +LD ++S D+V YN+ I S G ++ A+K F ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDE-----------------MGMCKKGMV 210
+ KP +TYT +I + D+A+++ + MG G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+A+ + ++G P VI+YN +L L MGK +E K+ EM + PN+ TY+IL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNIL 383
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
I LCR GK + A ++ + ++ GL P+ + + ++ CK +LD A + M C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
PD + + +++ K G D A +++EK+ D C N Y ++ ++ G K
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
+ +M+++ PD N+ + C+ + G ++ + ++++ RF P SY+I+I G
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
K NE+ E+ +M E+GC + Y ++I+G G +A +L
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 20/446 (4%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGE-PDVF 107
+ GK D + F + ANG KPD V T +I + + ++AV + E LEK P +
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
AYN +I G+ A + + A +L+R R++G P V+ YN ++ L G ++ A KVF+++
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQP 227
+D P + TY ILI +C+ G + AF+ S++ G P
Sbjct: 370 KKD-AAPNLSTYNILIDM------------------LCRAGKLDTAFELRDSMQKAGLFP 410
Query: 228 DVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVL 287
+V + N+++ L K +E + EM + P+ +T+ LI L + G+ +DA V
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 288 RAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKN 347
+ ++ Y LI + GR + + MI+ C PD+ NT + K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 348 GNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITY 407
G ++ +FE++ P+ SY+ + L +G + M +G D Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 408 NSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFE 467
N +I C+ G V++A LL +M++ F PTV++Y +I G K R++E+ +
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 468 KGCKPNETTYVLLIEGIGYGGWRAEA 493
K + N Y LI+G G G EA
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEA 676
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 190/401 (47%), Gaps = 19/401 (4%)
Query: 104 PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKV 163
P V ++ G KAN++ V+ +R F P Y +IG+ + + +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 164 FDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESR 223
F Q+ +PTV +T LI+ EG+ D A+ LLDEM +S
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM------------------KSS 232
Query: 224 GCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDA 283
D++ YN+ + + +GK + K E+ + GL+P+ VTY+ +I LC+ + ++A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 284 VDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 343
V++ ++ P Y+Y+ +I Y G+ D A L+ + G +P ++ YN IL
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 344 FCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 403
K G D+AL++FE++ PN+S+YN + L +G A + M G+ P+
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 404 EITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLA 463
T N ++ LC+ +DEA + +M+ P I++ +I G K R++++ +V
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 464 AMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMH 504
M + C+ N Y LI+ G + + ++ +++ +
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 188/406 (46%), Gaps = 18/406 (4%)
Query: 37 ETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQE-RKSNKAVRVM 95
E F LI + G+ D++ E M+ + C+ + ++ T LIK FF RK +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 96 EILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRG 155
+++ + PD+ N + KA + E + + +++R F PD +Y+I+I L G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 156 MIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM------------- 202
+++F + C Y I+I G+ +KA +LL+EM
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 203 ----GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISR 258
G+ K + +A+ +S+ + +V+ Y+ L+ +G+ +E ++ E++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 259 GLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLA 318
GL PN+ T++ L+ +L + + +A+ ++ KE TP+ +Y LI+ CK + + A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 319 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSA 378
F M G P ++Y T+++ K GN +A +F++ G P+ + YN M
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 379 LWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAV 424
L + + A + E +G+ T L+ L ++ +++A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 1/288 (0%)
Query: 210 VGQAFQFVRSLESRGCQPDVI-SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 268
V +A ++ R E R P SYN LL + ++ ++++ EM G P+V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137
Query: 269 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 328
++ + K + DV++ ++ P +Y LI A+ D+ + M
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 329 GCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRA 388
G P + + T++ F K G D AL + +++ ++ YN + G A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 389 LGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILG 448
E+ + G++PDE+TY S+I LC+ +DEAV + +E R P +YN +I+G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 449 FCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
+ + +E+ +L KG P+ Y ++ + G EA+++
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 1/286 (0%)
Query: 215 QFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSL 274
Q + + G P V + ++ + K EG ++ M P Y+ LI +
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 275 CRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 334
++ + + + +E G P + + LI + K+GR+D A+ LD M S DI
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 335 VNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISE 394
V YN + +F K G D A + F ++ G P+ +Y +M L + A+ M
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 395 MLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRR 454
+ P YN++I G DEA LL + P+VI+YN I+ K +
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 455 INESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 500
++E+++V M +K PN +TY +LI+ + G A EL +++
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 18/264 (6%)
Query: 49 RAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE-KYGEPDVF 107
+ GK +++ +E M G +P VV +I + + ++A + E + K E +V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 108 AYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQL 167
Y++LI GF K +I+ A +L+ L +G +P++ T+N ++ +L I A F +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 168 LRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMV 210
C P +TY ILI + +KA EM G+ K G +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+A ++ G PD YN ++ L N + + L E RGL + T +L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKG 294
+ +L ++ E A V +E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 243/466 (52%), Gaps = 21/466 (4%)
Query: 51 GKFDESLYFIESMVAN-GCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG-EPDVFA 108
GK +++L +E MV+ PD V ++K ++ + + ++ ++K G P+
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 109 YNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLL 168
YN L+ G+CK ++ A ++++ ++ PD+ TYNI+I LC+ G + ++ D +
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 169 RDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVG 211
+P V+TY LI G + +A KL+++M +CK+
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 212 QAFQFVRSL-ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
+ V+ L + G PD+++Y+ L++ L +G ++M EM +G++ N +T + +
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
+ +LC++ K ++A ++L +A ++G D +Y LI + ++ +++ A+E D M
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
P + +N+++ C +G + A+E F++L++ G P+ S++N++ G +A
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
+E + +PD T N L++ LC++GM ++A+ + R TV +YN +I FC
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFC 636
Query: 451 KTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMEL 496
K +++ E+ ++L+ M EKG +P+ TY I + G +E EL
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 211/465 (45%), Gaps = 27/465 (5%)
Query: 60 IESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVME--ILEKYGEPDVFAYNALISGFC 117
+ MV G +V L+ + E K A+ ++E + E PD YN ++
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 118 KANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVI 177
K ++ ++L ++ G P+ VTYN ++ C G ++ AF++ + + + N P +
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 178 TYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLR 237
TY ILI G+C G + + + + +++S QPDV++YN L+
Sbjct: 312 TYNILIN------------------GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 238 TLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKE----K 293
+G E KLM +M + G++ N VT++I + LC++ K E V R KE
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA---VTRKVKELVDMH 410
Query: 294 GLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQA 353
G +PD +Y LI AY K G L A+E + M G + + NTIL A CK D+A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 413
+ G + +Y T+ + +AL M EM I P T+NSLI
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 414 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 473
LC G + A+ ++ + P ++N IILG+CK R+ ++ E + KP+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 474 ETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTF 518
T +L+ G+ G +A+ N L+ + T+ + F
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAF 635
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 197/439 (44%), Gaps = 55/439 (12%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 102
++K + G+ + + M NG P+ V L+ + + +A +++E++++
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 103 E-PDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
PD+ YN LI+G C A + +++D ++S PDVVTYN +I G+ A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 162 KVFDQLLRDNCK------------------------------------PTVITYTILIQA 185
K+ +Q+ D K P ++TY LI+A
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 186 TMLEGQTDKAMKLLDEMG-----------------MCKKGMVGQAFQFVRSLESRGCQPD 228
+ G A++++ EMG +CK+ + +A + S RG D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 229 VISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLR 288
++Y L+ K E+ ++ EM + P V T++ LI LC GKTE A++
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 289 AAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNG 348
E GL PD +++ +I YCK+GR++ A EF + I PD N +L CK G
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 349 NADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYN 408
++AL F L + V+ YNTM SA A ++SEM KG+EPD TYN
Sbjct: 606 MTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 409 SLISCLCRDGMVDEAVGLL 427
S IS L DG + E LL
Sbjct: 665 SFISLLMEDGKLSETDELL 683
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 32/399 (8%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVR-VMEILEKY 101
LI F G E+ +E M +G K + V +K +E K R V E+++ +
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 102 G-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
G PD+ Y+ LI + K + A +++ + +G + +T N ++ +LC ++ A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
+ + + +TY LI E + +KA+++ DEM G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 204 MCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPN 263
+C G A + L G PD ++N ++ G+ E+ + E I +P+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 264 VVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLD 323
T +IL++ LC++G TE A++ E+ D +Y+ +ISA+CKD +L A + L
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 324 YMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSG 383
M G PD YN+ ++ ++G + E+ +K S + +M L
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS--------GKFGSMKRDLQVET 701
Query: 384 DKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDE 422
+K A E L+ + I Y+ +I LC G + E
Sbjct: 702 EKNPATSESKEELNT----EAIAYSDVIDELCSRGRLKE 736
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 297 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA---DQA 353
P +D +SAY +G+ +A++ MI P+++ NT+L + ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 354 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSK-GIEPDEITYNSLIS 412
E+F+ + +G NV ++N + + G ALGM+ M+S+ + PD +TYN+++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 413 CLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKP 472
+ + G + + LL+DM+ P ++YN ++ G+CK + E+ +++ M + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 473 NETTYVLLIEGIGYGGWRAEAMELANALVSM 503
+ TY +LI G+ G E +EL +A+ S+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSL 339
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 234/494 (47%), Gaps = 55/494 (11%)
Query: 63 MVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAYNALISGFCKANQ 121
M+ G +V L+K + + KAV ++ E+ PDVF+YN +I GFC+ +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 122 IELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTI 181
+E A ++ + ++ G S +VT+ I+I + C G ++ A ++ + ++ YT
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 182 LIQATMLEGQTDKAMKLLDEM-----------------GMCKKGMVGQAFQFVRSLESRG 224
LI+ G+ D+ L DE+ G CK G + +A + + RG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 225 CQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAV 284
+P+V +Y L+ L +GK +E +L+ MI + EPN VTY+I+I+ LC+DG DAV
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 285 DVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVNYNTILA 342
+++ K++ PD +Y+ L+ C G LD A + L M+ D PD+++YN ++
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 343 AFCKN-----------------------------------GNADQALEIFEKLSDVGCPP 367
CK G+ ++A+E+++++SD
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 368 NVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLL 427
N +Y M +G A G++ +M ++P YN L+S LC++G +D+A L
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 428 VDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYG 487
+M+ P V+S+NI+I G K I + +L M G P+ TY LI
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 488 GWRAEAMELANALV 501
G+ EA+ + +V
Sbjct: 613 GYLDEAISFFDKMV 626
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 237/488 (48%), Gaps = 30/488 (6%)
Query: 40 FMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILE 99
+K + R+ GK ++ + M N PDV +I+ F + ++ KA+ + ++
Sbjct: 148 LLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 100 KYG-EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIE 158
G + + LI FCKA +++ A L ++ G D+V Y +I C G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 159 SAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMVGQAFQFVR 218
+FD++L P ITY LI+ G CK G + +A +
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIR------------------GFCKLGQLKEASEIFE 306
Query: 219 SLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDG 278
+ RG +P+V +Y L+ L +GK +E +L+ MI + EPN VTY+I+I+ LC+DG
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 279 KTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCL--PDIVN 336
DAV+++ K++ PD +Y+ L+ C G LD A + L M+ D PD+++
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 337 YNTILAAFCKNGNADQALEIFEKLSD-VGCPPNVSSYNTMFSALWSSGDKIRALGMISEM 395
YN ++ CK QAL+I++ L + +G V++ N + ++ +GD +A+ + ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQI 485
Query: 396 LSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRI 455
I + TY ++I C+ GM++ A GLL M + +P+V YN ++ CK +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 456 NESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTF---K 512
+++ + M P+ ++ ++I+G G A L + S +S D F K
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSK 604
Query: 513 RLNRTFPL 520
+NR L
Sbjct: 605 LINRFLKL 612
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 208/416 (50%), Gaps = 22/416 (5%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQ--ERKSNKAVRVMEILEK 100
LI +AGK DE++ F++ M G + D+V+ T LI+ F E KA+ E+LE+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL-FDEVLER 276
Query: 101 YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESA 160
P YN LI GFCK Q++ A+++ + + RG P+V TY +I LC G + A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 161 FKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM-----------------G 203
++ + ++ + +P +TY I+I +G A+++++ M G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 204 MCKKGMVGQAFQFVRSL--ESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLE 261
+C KG + +A + + + +S PDVISYN L+ L + + + ++ +
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 262 PNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEF 321
+ VT +IL++S + G A+++ + + + ++ +Y +I +CK G L++A
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 322 LDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWS 381
L M P + +YN +L++ CK G+ DQA +FE++ P+V S+N M
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 382 SGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRP 437
+GD A ++ M G+ PD TY+ LI+ + G +DEA+ M + F P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 206/441 (46%), Gaps = 22/441 (4%)
Query: 91 AVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGS 150
AV V + G FA N L++ ++ ELA ++ + V+ + ++
Sbjct: 57 AVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116
Query: 151 LCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMGMCKKGMV 210
AF V +L+ V + IL++ G+C+
Sbjct: 117 YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK------------------GLCRNLEC 158
Query: 211 GQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSIL 270
G+A +R + PDV SYN ++R + E+ +L EM G ++VT+ IL
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 271 ISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGC 330
I + C+ GK ++A+ L+ K GL D Y LI +C G LD D ++ G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 331 LPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALG 390
P + YNT++ FCK G +A EIFE + + G PNV +Y + L G AL
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 391 MISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFC 450
+++ M+ K EP+ +TYN +I+ LC+DG+V +AV ++ M+ R RP I+YNI++ G C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 451 KTRRINESIEVLAAMFEKG--CKPNETTYVLLIEGIGYGGWRAEAMELANALV-SMHAIS 507
++E+ ++L M + P+ +Y LI G+ +A+++ + LV + A
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 508 RDTFK-RLNRTFPLLDVYKEI 527
R T LN T DV K +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAM 479
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 191/404 (47%), Gaps = 25/404 (6%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEIL-EKY 101
LI+ + G+ E+ E M+ G +P+V T LI K+ +A++++ ++ EK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 102 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 161
EP+ YN +I+ CK + A ++++ ++ R PD +TYNI++G LC++G ++ A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 162 KVFDQLLRDN--CKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
K+ +L+D+ P VI+Y LI E + +A+ + D +
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
K G V +A + + + + +Y ++ G + L+ +M L+P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
+V Y+ L+SSLC++G + A + + PD S++ +I K G + A L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 323 DYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSS 382
M G PD+ Y+ ++ F K G D+A+ F+K+ D G P+ +++ S
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 383 GDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGL 426
G+ + ++E++ K ++ D I + ++C D M + + +
Sbjct: 648 GETDK----LTELVKKLVDKD-IVLDKELTCTVMDYMCNSSANM 686
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 151/341 (44%), Gaps = 21/341 (6%)
Query: 43 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEK-- 100
+I + + G +++ +E M +PD + L+ + ++A +++ ++ K
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 101 -YGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIES 159
Y +PDV +YNALI G CK N++ A + D L + + D VT NI++ S G +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 160 AFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEM----------------- 202
A +++ Q+ TYT +I G + A LL +M
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 203 GMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEP 262
+CK+G + QA++ ++ PDV+S+N+++ L G + E L+ M GL P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 263 NVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFL 322
++ TYS LI+ + G ++A+ + G PDA+ D ++ G D E +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 323 DYMISDGCLPDIVNYNTILAAFCK-NGNADQALEIFEKLSD 362
++ + D T++ C + N D A + D
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,471,727
Number of Sequences: 539616
Number of extensions: 7347211
Number of successful extensions: 32947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 19516
Number of HSP's gapped (non-prelim): 3206
length of query: 534
length of database: 191,569,459
effective HSP length: 122
effective length of query: 412
effective length of database: 125,736,307
effective search space: 51803358484
effective search space used: 51803358484
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)